Pregenerated sensors for FBXO31 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052934Ensembl transcript IDs: ENSMUST00000059018.14, ENSMUST00000212985.2
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGGGTGTGGCCCAGAGGTCACCAGGGGCCAGAGTGGCGACTCCCTaGCAATCTTTGGTGGCTCCTAGCAACCAGGACAGAGGCCATGGT | + |
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Preference number: 1 (lower is better) Translates to: VGVAQRSPGARVATP*QSLVAPSNQDRGHG Trigger: ACCATGGCCTCTGTCCTGGTTGCTAGGAGCCACCAAAGATTGCCAGGGAGTCGCCACTCTGGCCCCTGGTGACCTCTGGGCCACACCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR CCA 90 bp | CCCAGAGGTCACCAGGGGCCAGAGTGGCGACTCCCTGGCAATCTTTaGTGGCTCCTAGCAACCAGGACAGAGGCCATGGTGGAATGCCCT | + |
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Preference number: 1 (lower is better) Translates to: PRGHQGPEWRLPGNL*WLLATRTEAMVECP Trigger: AGGGCATTCCACCATGGCCTCTGTCCTGGTTGCTAGGAGCCACCAAAGATTGCCAGGGAGTCGCCACTCTGGCCCCTGGTGACCTCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR TCA 90 bp | CTGAGCCTGACACTCGGCCATCCCACAGCGGCCACATCCAAGCAGTaGCCGTTTAGGTCATTGGAAGGGAACAGGTGCACAGAACCCTGC | + |
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Preference number: 1 (lower is better) Translates to: LSLTLGHPTAATSKQ*PFRSLEGNRCTEPC Trigger: GCAGGGTTCTGTGCACCTGTTCCCTTCCAATGACCTAAACGGTCACTGCTTGGATGTGGCCGCTGTGGGATGGCCGAGTGTCAGGCTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR TCA 90 bp | AAACCTGACAAGAGCTACCCGCGTGCCCAGCTACCTGCTCTCCACTaGCTCTGCGGCTTCCTGGTCACATCCGCCACTGTCCAAAGCTTC | + |
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Preference number: 1 (lower is better) Translates to: KPDKSYPRAQLPALH*LCGFLVTSATVQSF Trigger: GAAGCTTTGGACAGTGGCGGATGTGACCAGGAAGCCGCAGAGTCAGTGGAGAGCAGGTAGCTGGGCACGCGGGTAGCTCTTGTCAGGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR GCA 90 bp | CCTCTGTGCCCCACTGTCTTGAGAAGACAGTCCCACACTAGGCGATaGAGGTGTCCTGAGGTTCGCAAAGTCCTGACAGCTGAGCAGGAT | + |
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Preference number: 1 (lower is better) Translates to: PLCPTVLRRQSHTRR*RCPEVRKVLTAEQD Trigger: ATCCTGCTCAGCTGTCAGGACTTTGCGAACCTCAGGACACCTGCATCGCCTAGTGTGGGACTGTCTTCTCAAGACAGTGGGGCACAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR TCA 90 bp | AAAGGTTCTGGGAAATGCACACTTCTGCTTTTCTCCAGGGAAACCTaGCAAGAGCTACCCGCGTGCCCAGCTACCTGCTCTCCACTGACT | + |
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Preference number: 1 (lower is better) Translates to: KGSGKCTLLLFSRET*QELPACPATCSPLT Trigger: AGTCAGTGGAGAGCAGGTAGCTGGGCACGCGGGTAGCTCTTGTCAGGTTTCCCTGGAGAAAAGCAGAAGTGTGCATTTCCCAGAACCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR CCA 90 bp | CCCCCACTGAACCAGAAGCGGCCGAAGACACTCAGGGAAAGGTTCTaGGAAATGCACACTTCTGCTTTTCTCCAGGGAAACCTGACAAGA | + |
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Preference number: 1 (lower is better) Translates to: PPLNQKRPKTLRERF*EMHTSAFLQGNLTR Trigger: TCTTGTCAGGTTTCCCTGGAGAAAAGCAGAAGTGTGCATTTCCCAGAACCTTTCCCTGAGTGTCTTCGGCCGCTTCTGGTTCAGTGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR GCA 90 bp | AATCTTTGGTGGCTCCTAGCAACCAGGACAGAGGCCATGGTGGAATaGCCTGTCCAAGATCTAAGCAAGCCAGTGAGGAAATGGAAACCT | + |
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Preference number: 1 (lower is better) Translates to: NLWWLLATRTEAMVE*PVQDLSKPVRKWKP Trigger: AGGTTTCCATTTCCTCACTGGCTTGCTTAGATCTTGGACAGGGCATTCCACCATGGCCTCTGTCCTGGTTGCTAGGAGCCACCAAAGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR CCA 90 bp | CATTTAATTCTCCATGCCACAGGCACCGGTCATTCAGCTCGATCCTaGCTCAACTCCGTTTATTTTCTCACCATGCTTAGCGTTCTCCTT | + |
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Preference number: 1 (lower is better) Translates to: HLILHATGTGHSARS*LNSVYFLTMLSVLL Trigger: AAGGAGAACGCTAAGCATGGTGAGAAAATAAACGGAGTTGAGCCAGGATCGAGCTGAATGACCGGTGCCTGTGGCATGGAGAATTAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR CAA 90 bp | GCCCAGAGGTCACCAGGGGCCAGAGTGGCGACTCCCTGGCAATCTTaGGTGGCTCCTAGCAACCAGGACAGAGGCCATGGTGGAATGCCC | + |
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Preference number: 2 (lower is better) Translates to: AQRSPGARVATPWQS*VAPSNQDRGHGGMP Trigger: GGGCATTCCACCATGGCCTCTGTCCTGGTTGCTAGGAGCCACCAAAGATTGCCAGGGAGTCGCCACTCTGGCCCCTGGTGACCTCTGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR CCA 90 bp | AGAGCTACCCGCGTGCCCAGCTACCTGCTCTCCACTGACTCTGCGGCTTCCTGGGACGCTCCCAAAGGCTaGGCTCAGACAGGGTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: RATRVPSYLLSTDSAASWDAPKG*AQTGSS Trigger: TGAGGACCCTGTCTGAGCCCAGCCTTTGGGAGCGTC...CCAGGAAGCCGCAGAGTCAGTGGAGAGCAGGTAGCTGGGCACGCGGGTAGCTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR CCA 90 bp | TTCCCGAGGCTTGCCCCTGACCTTACCCATACCATCTCCACACACAGCGGGGCAAGCAGCCAATGGCACTaGCCTGGTGAGGCCCGGGGA | + |
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Preference number: 2 (lower is better) Translates to: FPRLAPDLTHTISTHSGASSQWH*PGEARG Trigger: TCCCCGGGCCTCACCAGGCCAGTGCCATTGGCTGCT...TGCCCCGCTGTGTGTGGAGATGGTATGGGTAAGGTCAGGGGCAAGCCTCGGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR GCA 90 bp | AGGCGATGCAGGTGTCCTGAGGTTCGCAAAGTCCTGACAGCTGAGCAGGATGGGCAGGGACAGGAAGTGTaGAGAGCTGACAGCCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: RRCRCPEVRKVLTAEQDGQGQEV*RADSPE Trigger: CTCTGGGCTGTCAGCTCTGCACACTTCCTGTCCCTG...CCCATCCTGCTCAGCTGTCAGGACTTTGCGAACCTCAGGACACCTGCATCGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR CCA 90 bp | GTCACATCCGCCACTGTCCAAAGCTTCTCAGGACTAACAGAGCTCGCCGCAGGTCACCAGGGGCCAGAGTaGCGACTCCCTGGCAATCTT | + |
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Preference number: 2 (lower is better) Translates to: VTSATVQSFSGLTELAAGHQGPE*RLPGNL Trigger: AAGATTGCCAGGGAGTCGCCACTCTGGCCCCTGGTG...ACCTGCGGCGAGCTCTGTTAGTCCTGAGAAGCTTTGGACAGTGGCGGATGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR TCA 90 bp | AGGCGATGCAGGTGTCCTGAGGTTCGCAAAGTCCTGACAGCTGAGCAGGATGGGGATGAGTTCTCAGCATaGGGGCTTGCCAAAGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: RRCRCPEVRKVLTAEQDGDEFSA*GLAKAP Trigger: TGGGGCTTTGGCAAGCCCTCATGCTGAGAACTCATC...CCCATCCTGCTCAGCTGTCAGGACTTTGCGAACCTCAGGACACCTGCATCGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR GCA 90 bp | GCTGGTCTCTGTGCAAACACAGAGGACTCCACCACAGAAAAGCACCCGGCAGGTCCAGCCTCGAGTGGCTaGCATCTTCCTAAGGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: AGLCANTEDSTTEKHPAGPASSG*HLPKVP Trigger: AGGGACCTTAGGAAGATGGCAGCCACTCGAGGCTGG...ACCTGCCGGGTGCTTTTCTGTGGTGGAGTCCTCTGTGTTTGCACAGAGACCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR CCA 90 bp | GTGCTGGTCTCTGTGCAAACACAGAGGACTCCACCACAGAAAAGCACCCGGCAGCCAGGACAGAGGCCATaGTGGAATGCCCTGTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: VLVSVQTQRTPPQKSTRQPGQRP*WNALSK Trigger: CTTGGACAGGGCATTCCACCATGGCCTCTGTCCTGG...CTGCCGGGTGCTTTTCTGTGGTGGAGTCCTCTGTGTTTGCACAGAGACCAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR CCA 90 bp | CCACCCTCTGTCCAGAACCAGGTGTGTGTGTGTGTGTTGTGTGTGTGTCTGTGTCTTCGAGAGTGGGTGTaGCCCAGAGGTCACCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: PPSVQNQVCVCVLCVCLCLREWV*PRGHQG Trigger: CCCCTGGTGACCTCTGGGCCACACCCACTCTCGAAG...ACACAGACACACACACAACACACACACACACACCTGGTTCTGGACAGAGGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR TCA 90 bp | CTAACAGAGCTCGCCGCAGGTTCTGTTACTGCTCCTGACAAAGCCAGCATCCTACCACACTACCTCTCCTaGGTCTACAGGCCCAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: LTELAAGSVTAPDKASILPHYLS*VYRPSL Trigger: GAGGCTGGGCCTGTAGACTCAGGAGAGGTAGTGTGG...TAGGATGCTGGCTTTGTCAGGAGCAGTAACAGAACCTGCGGCGAGCTCTGTTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR TCA 90 bp | CACCCGGCAGGTTCCTTCAGTGTCACGACCCACAGTGAAACCCTTCTTGGAAAGAGGTTCGCAAAGTCCTaGCAGCTGAGCAGGATGGGC | + |
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Preference number: 2 (lower is better) Translates to: HPAGSFSVTTHSETLLGKRFAKS*QLSRMG Trigger: GCCCATCCTGCTCAGCTGTCAGGACTTTGCGAACCT...CTTTCCAAGAAGGGTTTCACTGTGGGTCGTGACACTGAAGGAACCTGCCGGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR GCA 90 bp | TGGCAATCTTTGGTGGCTCCTAGCAACCAGGACAGAGGCCATGGTGGAATGCCCTTGGAAGGGAACAGGTaGACAGAACCCTGCCCCCTA | + |
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Preference number: 2 (lower is better) Translates to: WQSLVAPSNQDRGHGGMPLEGNR*TEPCPL Trigger: TAGGGGGCAGGGTTCTGTGCACCTGTTCCCTTCCAA...GGGCATTCCACCATGGCCTCTGTCCTGGTTGCTAGGAGCCACCAAAGATTGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR TCA 90 bp | TCCAGAACCAGGTGTGTGTGTGTGTGTTGTGTGTGTGTCTGTGTGTGCTCCAGACTACCTGCTCTCCACTaGCTCTGCGGCTTCCTGGTC | + |
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Preference number: 2 (lower is better) Translates to: SRTRCVCVCCVCVCVCSRLPALH*LCGFLV Trigger: GACCAGGAAGCCGCAGAGTCAGTGGAGAGCAGGTAG...TCTGGAGCACACACAGACACACACACAACACACACACACACACCTGGTTCTGGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR TCA 90 bp | GTGCTGGTCTCTGTGCAAACACAGAGGACTCCACCACAGAAAAGCACCCGGCAGCACACTGTTGATGTCTaGGGTCTGAGTGATGGCGGT | + |
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Preference number: 2 (lower is better) Translates to: VLVSVQTQRTPPQKSTRQHTVDV*GLSDGG Trigger: ACCGCCATCACTCAGACCTCAGACATCAACAGTGTG...CTGCCGGGTGCTTTTCTGTGGTGGAGTCCTCTGTGTTTGCACAGAGACCAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR GCA 90 bp | CTCCCAAAGGCTGGGCTCAGACAGGGTCCTCAAACACAAACACTAGCAGGCCCGAGGGGCAGATTTGCTTaGTTCAGAAAACCAGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LPKAGLRQGPQTQTLAGPRGRFA*FRKPAG Trigger: GCCTGCTGGTTTTCTGAAGCAAGCAAATCTGCCCCT...CGGGCCTGCTAGTGTTTGTGTTTGAGGACCCTGTCTGAGCCCAGCCTTTGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR GCA 90 bp | AATTACAAGAGCAGCCAATGGCACTGGCCTGGTGAGGCCCGGGGACAAGGATGTGCCCTAAAGGCAGCTTaGAAGCAAGGGTCCTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: NYKSSQWHWPGEARGQGCALKAA*KQGSFL Trigger: AAGGAAGGACCCTTGCTTGCAAGCTGCCTTTAGGGC...ACATCCTTGTCCCCGGGCCTCACCAGGCCAGTGCCATTGGCTGCTCTTGTAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR CCA 90 bp | TCCAGAACCAGGTGTGTGTGTGTGTGTTGTGTGTGTGTCTGTGTGTGCTCCAGAGACTCTGCGGCTTCCTaGTCACATCCGCCACTGTCC | + |
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Preference number: 2 (lower is better) Translates to: SRTRCVCVCCVCVCVCSRDSAAS*SHPPLS Trigger: GGACAGTGGCGGATGTGACCAGGAAGCCGCAGAGTC...TCTGGAGCACACACAGACACACACACAACACACACACACACACCTGGTTCTGGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR TCA 90 bp | AATTACAAGAGCAGCCAATGGCACTGGCCTGGTGAGGCCCGGGGACAAGGATGTGCCACATCCAAGCAGTaGCCGTTTAGGTCATTGGAA | + |
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Preference number: 2 (lower is better) Translates to: NYKSSQWHWPGEARGQGCATSKQ*PFRSLE Trigger: TTCCAATGACCTAAACGGTCACTGCTTGGATGTGGC...ACATCCTTGTCCCCGGGCCTCACCAGGCCAGTGCCATTGGCTGCTCTTGTAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR TCA 90 bp | ACTGAACCAGAAGCGGCCGAAGACACTCAGGGAAAGGTTCTGGGAAATGCACACCACCTACAAAGGGCTTaGCAGTGCTCGCTGCTGACA | + |
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Preference number: 2 (lower is better) Translates to: TEPEAAEDTQGKVLGNAHHLQRA*QCSLLT Trigger: TGTCAGCAGCGAGCACTGTCAAGCCCTTTGTAGGTG...GTGTGCATTTCCCAGAACCTTTCCCTGAGTGTCTTCGGCCGCTTCTGGTTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR GCA 90 bp | CCCACAGTGAAACCCTTCTTGGAAAGTGGGTCATGTGGGCCGGAGGTTGGTACAACAAGGATGTCCACCTaGCTTGTTGAGCGGACTTCC | + |
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Preference number: 2 (lower is better) Translates to: PTVKPFLESGSCGPEVGTTRMST*LVERTS Trigger: GGAAGTCCGCTCAACAAGGCAGGTGGACATCCTTGT...TGTACCAACCTCCGGCCCACATGACCCACTTTCCAAGAAGGGTTTCACTGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR GCA 90 bp | AGGCGATGCAGGTGTCCTGAGGTTCGCAAAGTCCTGACAGCTGAGCAGGATGGGATGGGCTGTGCAGCCTaGAGCAGCAAAATTACAAGA | + |
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Preference number: 2 (lower is better) Translates to: RRCRCPEVRKVLTAEQDGMGCAA*SSKITR Trigger: TCTTGTAATTTTGCTGCTGCAGGCTGCACAGCCCAT...CCCATCCTGCTCAGCTGTCAGGACTTTGCGAACCTCAGGACACCTGCATCGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR CCA 90 bp | GAACCAGAAGCGGCCGAAGACACTCAGGGAAAGGTTCTGGGAAATGCACACTTCGGACAGAGGCCATGGTaGAATGCCCTGTCCAAGATC | + |
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Preference number: 2 (lower is better) Translates to: EPEAAEDTQGKVLGNAHFGQRPW*NALSKI Trigger: GATCTTGGACAGGGCATTCCACCATGGCCTCTGTCC...GAAGTGTGCATTTCCCAGAACCTTTCCCTGAGTGTCTTCGGCCGCTTCTGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR CCA 90 bp | ACTGAACCAGAAGCGGCCGAAGACACTCAGGGAAAGGTTCTGGGAAATGCACACGTCGGTGTCAACACTTaGAGAGGCATCTGCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: TEPEAAEDTQGKVLGNAHVGVNT*RGICTA Trigger: GGCTGTGCAGATGCCTCTCCAAGTGTTGACACCGAC...GTGTGCATTTCCCAGAACCTTTCCCTGAGTGTCTTCGGCCGCTTCTGGTTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR CAA 90 bp | CTCGGTGAGCACAAGAAACGGGCTGAGAACGCACATGCTAGCACTTaGTGCTGGTCTCTGTGCAAACACAGAGGACTCCACCACAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: LGEHKKRAENAHAST*CWSLCKHRGLHHRK Trigger: TTTTCTGTGGTGGAGTCCTCTGTGTTTGCACAGAGACCAGCACAAAGTGCTAGCATGTGCGTTCTCAGCCCGTTTCTTGTGCTCACCGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR TCA 90 bp | ACACTCAGGGAAAGGTTCTGGGAAATGCACACTTCTGCTTTTCTCCAGGGAAACGCATCTGCACAGCCGTaGAATGAGAGCACCAGCGAT | + |
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Preference number: 2 (lower is better) Translates to: TLRERFWEMHTSAFLQGNASAQP*NESTSD Trigger: ATCGCTGGTGCTCTCATTTCACGGCTGTGCAGATGC...GTTTCCCTGGAGAAAAGCAGAAGTGTGCATTTCCCAGAACCTTTCCCTGAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR TCA 90 bp | GTGCTGGTCTCTGTGCAAACACAGAGGACTCCACCACAGAAAAGCACCCGGCAGAATGCCCATAGGTCCTaGAAGGTGAACGAACAATTA | + |
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Preference number: 2 (lower is better) Translates to: VLVSVQTQRTPPQKSTRQNAHRS*KVNEQL Trigger: TAATTGTTCGTTCACCTTTCAGGACCTATGGGCATT...CTGCCGGGTGCTTTTCTGTGGTGGAGTCCTCTGTGTTTGCACAGAGACCAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR CCA 90 bp | GAACCAGAAGCGGCCGAAGACACTCAGGGAAAGGTTCTGGGAAATGCACACTTCAAGCCAGTGAGGAAATaGAAACCTATCCCTGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: EPEAAEDTQGKVLGNAHFKPVRK*KPIPEP Trigger: AGGCTCAGGGATAGGTTTCCATTTCCTCACTGGCTT...GAAGTGTGCATTTCCCAGAACCTTTCCCTGAGTGTCTTCGGCCGCTTCTGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR TCA 90 bp | CATGCTAGCACTTTGTGCTGGTCTCTGTGCAAACACAGAGGACTCCACCACAGATTCTGTTACTGCTCCTaGCAAAGCCAGCATCCTAAA | + |
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Preference number: 2 (lower is better) Translates to: HASTLCWSLCKHRGLHHRFCYCS*QSQHPK Trigger: TTTAGGATGCTGGCTTTGTCAGGAGCAGTAACAGAA...TCTGTGGTGGAGTCCTCTGTGTTTGCACAGAGACCAGCACAAAGTGCTAGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR CCA 72 bp | GGTGGCTGGCCTGACAACTCGGCTCTACTTCGAGAGTaGGTGTGGCCCAGAGGTCACCAGGGGCCAGAGTGG | + |
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Preference number: 3 (lower is better) Translates to: GGWPDNSALLRE*VWPRGHQGPEW Trigger: CCACTCTGGCCCCTGGTGACCTCTGGGCCACACCCACTCTCGAAGTAGAGCCGAGTTGTCAGGCCAGCCACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR CCA 72 bp | TGTGGTGTCGGCAGGCGGGCCCTCCAGATAAACGTGTaGAGGACCAAGGGAGGGCATTCGGCTGCTGGGGAC | + |
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Preference number: 3 (lower is better) Translates to: CGVGRRALQINV*RTKGGHSAAGD Trigger: GTCCCCAGCAGCCGAATGCCCTCCCTTGGTCCTCCACACGTTTATCTGGAGGGCCCGCCTGCCGACACCACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR TCA 72 bp | GGCATTCGGCTGCTGGGGACAAGCAGGTGGCTGGCCTaGCAACTCGGCTCTACTTCGAGAGTGGGTGTGGCC | + |
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Preference number: 3 (lower is better) Translates to: GIRLLGTSRWLA*QLGSTSRVGVA Trigger: GGCCACACCCACTCTCGAAGTAGAGCCGAGTTGTCAGGCCAGCCACCTGCTTGTCCCCAGCAGCCGAATGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR CCA 72 bp | GAGTGGGTGTGGCCCAGAGGTCACCAGGGGCCAGAGTaGCGACTCCCTGGCAATCTTTGGTGGCTCCTAGCA | + |
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Preference number: 3 (lower is better) Translates to: EWVWPRGHQGPE*RLPGNLWWLLA Trigger: TGCTAGGAGCCACCAAAGATTGCCAGGGAGTCGCCACTCTGGCCCCTGGTGACCTCTGGGCCACACCCACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR CCA 72 bp | TGGCCTGACAACTCGGCTCTACTTCGAGAGTGGGTGTaGCCCAGAGGTCACCAGGGGCCAGAGTGGCGACTC | + |
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Preference number: 3 (lower is better) Translates to: WPDNSALLREWV*PRGHQGPEWRL Trigger: GAGTCGCCACTCTGGCCCCTGGTGACCTCTGGGCCACACCCACTCTCGAAGTAGAGCCGAGTTGTCAGGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR CCA 72 bp | GGGAGGGCATTCGGCTGCTGGGGACAAGCAGGTGGCTaGCCTGACAACTCGGCTCTACTTCGAGAGTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: GRAFGCWGQAGG*PDNSALLREWV Trigger: CACCCACTCTCGAAGTAGAGCCGAGTTGTCAGGCCAGCCACCTGCTTGTCCCCAGCAGCCGAATGCCCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR TCA 72 bp | AAGAGCTACCCGCGTGCCCAGCTACCTGCTCTCCACTaGCTCTGCGGCTTCCTGGTCACATCCGCCACTGTC | + |
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Preference number: 3 (lower is better) Translates to: KSYPRAQLPALH*LCGFLVTSATV Trigger: GACAGTGGCGGATGTGACCAGGAAGCCGCAGAGTCAGTGGAGAGCAGGTAGCTGGGCACGCGGGTAGCTCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR CCA 72 bp | CACCAGGGGCCAGAGTGGCGACTCCCTGGCAATCTTTaGTGGCTCCTAGCAACCAGGACAGAGGCCATGGTG | + |
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Preference number: 3 (lower is better) Translates to: HQGPEWRLPGNL*WLLATRTEAMV Trigger: CACCATGGCCTCTGTCCTGGTTGCTAGGAGCCACCAAAGATTGCCAGGGAGTCGCCACTCTGGCCCCTGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR CCA 72 bp | GCCCAGAGGTCACCAGGGGCCAGAGTGGCGACTCCCTaGCAATCTTTGGTGGCTCCTAGCAACCAGGACAGA | + |
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Preference number: 3 (lower is better) Translates to: AQRSPGARVATP*QSLVAPSNQDR Trigger: TCTGTCCTGGTTGCTAGGAGCCACCAAAGATTGCCAGGGAGTCGCCACTCTGGCCCCTGGTGACCTCTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR CCA 72 bp | AAACGTGTGGAGGACCAAGGGAGGGCATTCGGCTGCTaGGGACAAGCAGGTGGCTGGCCTGACAACTCGGCT | + |
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Preference number: 3 (lower is better) Translates to: KRVEDQGRAFGC*GQAGGWPDNSA Trigger: AGCCGAGTTGTCAGGCCAGCCACCTGCTTGTCCCCAGCAGCCGAATGCCCTCCCTTGGTCCTCCACACGTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR-3UTR CAA 90 bp | GAGGCCCGGGGACAAGGATGTCCACCTGCCTTGTTGAGCGGACTTCCAGGGCCTAGCCCTAAAGGCAGCTaGCAAGCAAGGGTCCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: EARGQGCPPALLSGLPGPSPKGS*QARVLP Trigger: AGGAAGGACCCTTGCTTGCAAGCTGCCTTTAGGGCT...AGGCCCTGGAAGTCCGCTCAACAAGGCAGGTGGACATCCTTGTCCCCGGGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR GCA 72 bp | GATAAACGTGTGGAGGACCAAGGGAGGGCATTCGGCTaGTGGGGACAAGCAGGTGGCTGGCCTGACAACTCG | + |
|
Preference number: 3 (lower is better) Translates to: DKRVEDQGRAFG*WGQAGGWPDNS Trigger: CGAGTTGTCAGGCCAGCCACCTGCTTGTCCCCAGCAGCCGAATGCCCTCCCTTGGTCCTCCACACGTTTATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR CCA 72 bp | CAGGGGCCAGAGTGGCGACTCCCTGGCAATCTTTGGTaGCTCCTAGCAACCAGGACAGAGGCCATGGTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: QGPEWRLPGNLW*LLATRTEAMVE Trigger: TTCCACCATGGCCTCTGTCCTGGTTGCTAGGAGCCACCAAAGATTGCCAGGGAGTCGCCACTCTGGCCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR TCA 72 bp | GTGAGGCCCGGGGACAAGGATGTCCACCTGCCTTGTTaGGCGGACTTCCAGGGCCTTGCTGTTCTCTACATG | + |
|
Preference number: 3 (lower is better) Translates to: VRPGDKDVHLPC*ADFQGLAVLYM Trigger: CATGTAGAGAACAGCAAGGCCCTGGAAGTCCGCTCAACAAGGCAGGTGGACATCCTTGTCCCCGGGCCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR CCA 72 bp | CATCTGCACAGCCGTGAAATGAGAGCACCAGCGATGTaGTGTCGGCAGGCGGGCCCTCCAGATAAACGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: HLHSREMRAPAM*CRQAGPPDKRV Trigger: CACACGTTTATCTGGAGGGCCCGCCTGCCGACACCACATCGCTGGTGCTCTCATTTCACGGCTGTGCAGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR CCA 72 bp | CCCAGCTACCTGCTCTCCACTGACTCTGCGGCTTCCTaGTCACATCCGCCACTGTCCAAAGCTTCTCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: PSYLLSTDSAAS*SHPPLSKASQD Trigger: GTCCTGAGAAGCTTTGGACAGTGGCGGATGTGACCAGGAAGCCGCAGAGTCAGTGGAGAGCAGGTAGCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGTCTCTGTGCAAACACAGAGGACTCCACCACAGAAAAGCACCCGGCAGGTTGGCTGGCGCAGCAGTaGGCCAGAAGCCACTGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: AGLCANTEDSTTEKHPAGWLAQQ*ARSHCQ Trigger: TTGACAGTGGCTTCTGGCCAACTGCTGCGCCAGCCA...ACCTGCCGGGTGCTTTTCTGTGGTGGAGTCCTCTGTGTTTGCACAGAGACCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR TCA 72 bp | TCGGTGTCAACACTTGGAGAGGCATCTGCACAGCCGTaGAATGAGAGCACCAGCGATGTGGTGTCGGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SVSTLGEASAQP*NESTSDVVSAG Trigger: GCCTGCCGACACCACATCGCTGGTGCTCTCATTTCACGGCTGTGCAGATGCCTCTCCAAGTGTTGACACCGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR TCA 72 bp | CAAGCAAGGGTCCTTCCTTCACCACACTACCTCTCCTaGGTCTACAGGCCCAGCCTCGAGTGGCTGCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: QARVLPSPHYLS*VYRPSLEWLPS Trigger: AGATGGCAGCCACTCGAGGCTGGGCCTGTAGACTCAGGAGAGGTAGTGTGGTGAAGGAAGGACCCTTGCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR TCA 72 bp | GTCATGTGGGCCGGAGGTTGGTACAGGTCAGGCGCTTaGTGTCCTCTGTGCCCCACTGTCTTGAGAAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: VMWAGGWYRSGA*CPLCPTVLRRQ Trigger: CTGTCTTCTCAAGACAGTGGGGCACAGAGGACATCAAGCGCCTGACCTGTACCAACCTCCGGCCCACATGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR CCA 72 bp | CAGCGGCCACATCCAAGCAGTGACCGTTTAGGTCATTaGAAGGGAACAGGTGCACAGAACCCTGCCCCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: QRPHPSSDRLGH*KGTGAQNPAPY Trigger: GTAGGGGGCAGGGTTCTGTGCACCTGTTCCCTTCCAATGACCTAAACGGTCACTGCTTGGATGTGGCCGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR CCA 72 bp | CTGCAGCAGCAAAATTACAAGAGCAGCCAATGGCACTaGCCTGGTGAGGCCCGGGGACAAGGATGTCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: LQQQNYKSSQWH*PGEARGQGCPP Trigger: AGGTGGACATCCTTGTCCCCGGGCCTCACCAGGCCAGTGCCATTGGCTGCTCTTGTAATTTTGCTGCTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR CCA 72 bp | TGCAGCCTGCAGCAGCAAAATTACAAGAGCAGCCAATaGCACTGGCCTGGTGAGGCCCGGGGACAAGGATGT | + |
|
Preference number: 3 (lower is better) Translates to: CSLQQQNYKSSQ*HWPGEARGQGC Trigger: ACATCCTTGTCCCCGGGCCTCACCAGGCCAGTGCCATTGGCTGCTCTTGTAATTTTGCTGCTGCAGGCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR CCA 72 bp | CAGATGGCCAGATCAGCGTGTTCAGCTCCAGGTTCTTaGGGAAGGAAGGCGGTTAGCAGGCGAGTGCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: QMARSACSAPGS*GRKAVSRRVPH Trigger: ATGAGGCACTCGCCTGCTAACCGCCTTCCTTCCCCAAGAACCTGGAGCTGAACACGCTGATCTGGCCATCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR-3UTR CAA 90 bp | GTGCTGGTCTCTGTGCAAACACAGAGGACTCCACCACAGAAAAGCACCCGGCAGCAGGCGAGTGCCTCATaGCTTGATGTGAAGAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: VLVSVQTQRTPPQKSTRQQASAS*LDVKKA Trigger: GGCCTTCTTCACATCAAGCAATGAGGCACTCGCCTG...CTGCCGGGTGCTTTTCTGTGGTGGAGTCCTCTGTGTTTGCACAGAGACCAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR TCA 72 bp | ACACTCGGCCATCCCACAGCGGCCACATCCAAGCAGTaGCCGTTTAGGTCATTGGAAGGGAACAGGTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: TLGHPTAATSKQ*PFRSLEGNRCT Trigger: TGTGCACCTGTTCCCTTCCAATGACCTAAACGGTCACTGCTTGGATGTGGCCGCTGTGGGATGGCCGAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR TCA 72 bp | GGTCCTTCCCTGACCCTAGGCAAAGCGGAGCTGACCTaGGAGCTTTTAAGAGCCACCCTCTGTCCAGAACCA | + |
|
Preference number: 3 (lower is better) Translates to: GPSLTLGKAELT*ELLRATLCPEP Trigger: TGGTTCTGGACAGAGGGTGGCTCTTAAAAGCTCTCAGGTCAGCTCCGCTTTGCCTAGGGTCAGGGAAGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR CCA 72 bp | AGTGTCACGACCCACAGTGAAACCCTTCTTGGAAAGTaGGTCATGTGGGCCGGAGGTTGGTACAGGTCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SVTTHSETLLGK*VMWAGGWYRSG Trigger: GCCTGACCTGTACCAACCTCCGGCCCACATGACCCACTTTCCAAGAAGGGTTTCACTGTGGGTCGTGACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR TCA 72 bp | GGGAAATGCACACTTCTGCTTTTCTCCAGGGAAACCTaGCAAGAGCTACCCGCGTGCCCAGCTACCTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GKCTLLLFSRET*QELPACPATCS Trigger: AGAGCAGGTAGCTGGGCACGCGGGTAGCTCTTGTCAGGTTTCCCTGGAGAAAAGCAGAAGTGTGCATTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR TCA 72 bp | GTTGAGCGGACTTCCAGGGCCTTGCTGTTCTCTACATaGGGCCACACTACATGCAACAATGGTATCAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: VERTSRALLFST*GHTTCNNGISP Trigger: GGGGCTGATACCATTGTTGCATGTAGTGTGGCCTCATGTAGAGAACAGCAAGGCCCTGGAAGTCCGCTCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR GCA 72 bp | TGGCTCCTAGCAACCAGGACAGAGGCCATGGTGGAATaGCCTGTCCAAGATCTAAGCAAGCCAGTGAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: WLLATRTEAMVE*PVQDLSKPVRK Trigger: TTTCCTCACTGGCTTGCTTAGATCTTGGACAGGGCATTCCACCATGGCCTCTGTCCTGGTTGCTAGGAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR CCA 72 bp | TGCCCTGTCCAAGATCTAAGCAAGCCAGTGAGGAAATaGAAACCTATCCCTGAGCCTGACACTCGGCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: CPVQDLSKPVRK*KPIPEPDTRPS Trigger: GGATGGCCGAGTGTCAGGCTCAGGGATAGGTTTCCATTTCCTCACTGGCTTGCTTAGATCTTGGACAGGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR CCA 72 bp | CTCCATGCCACAGGCACCGGTCATTCAGCTCGATCCTaGCTCAACTCCGTTTATTTTCTCACCATGCTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: LHATGTGHSARS*LNSVYFLTMLS Trigger: GCTAAGCATGGTGAGAAAATAAACGGAGTTGAGCCAGGATCGAGCTGAATGACCGGTGCCTGTGGCATGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR CCA 72 bp | AAACGGGCTGAGAACGCACATGCTAGCACTTTGTGCTaGTCTCTGTGCAAACACAGAGGACTCCACCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: KRAENAHASTLC*SLCKHRGLHHR Trigger: TCTGTGGTGGAGTCCTCTGTGTTTGCACAGAGACCAGCACAAAGTGCTAGCATGTGCGTTCTCAGCCCGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR-3UTR CAA 90 bp | TGCAGAGCTGACAGCCCAGAGCAGAGGGGCCCAGAGTCTAAACTCATGTTACAATTCCTAGGGGCAGATTaGCTTGCTTCAGAAAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: CRADSPEQRGPESKLMLQFLGAD*LASENQ Trigger: CTGGTTTTCTGAAGCAAGCAAATCTGCCCCTAGGAA...TTGTAACATGAGTTTAGACTCTGGGCCCCTCTGCTCTGGGCTGTCAGCTCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR TCA 72 bp | AAGTATCTAGAAGACTGCCTTCACCTACAAAGGGCTTaGCAGTGCTCGCTGCTGACAAGGTCGTCGGTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: KYLEDCLHLQRA*QCSLLTRSSVS Trigger: TGACACCGACGACCTTGTCAGCAGCGAGCACTGTCAAGCCCTTTGTAGGTGAAGGCAGTCTTCTAGATACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR GCA 72 bp | GACACTCAGGGAAAGGTTCTGGGAAATGCACACTTCTaGTTTTCTCCAGGGAAACCTGACAAGAGCTACCCG | + |
|
Preference number: 3 (lower is better) Translates to: DTQGKVLGNAHF*FSPGKPDKSYP Trigger: CGGGTAGCTCTTGTCAGGTTTCCCTGGAGAAAAGCAGAAGTGTGCATTTCCCAGAACCTTTCCCTGAGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| CDS-3UTR GCA 90 bp | AGAGCTACCCGCGTGCCCAGCTACCTGCTCTCCACTGACTCTGCGGCTTCCTGGCCCTCGCCGGCCTCCTaGTCCTGCCGCACCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RATRVPSYLLSTDSAASWPSPAS*SCRTCS Trigger: GGAGCAGGTGCGGCAGGAGCAGGAGGCCGGCGAGGG...CCAGGAAGCCGCAGAGTCAGTGGAGAGCAGGTAGCTGGGCACGCGGGTAGCTCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGTCTCTGTGCAAACACAGAGGACTCCACCACAGAAAAGCACCCGGCAGCCGGCCTCCTGCTCCTaGCGCACCTGCTCCCGGACC | + |
|
Preference number: 4 (lower is better) Translates to: VLVSVQTQRTPPQKSTRQPASCS*RTCSRT Trigger: GGTCCGGGAGCAGGTGCGGCAGGAGCAGGAGGCCGG...CTGCCGGGTGCTTTTCTGTGGTGGAGTCCTCTGTGTTTGCACAGAGACCAGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| CDS-3UTR TCA 90 bp | CAATGGCACTGGCCTGGTGAGGCCCGGGGACAAGGATGTCCACCTGCCTTGTTGCCCACGTGGGGGTCATaGGGTGGCAGGTACATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QWHWPGEARGQGCPPALLPTWGS*GGRYIQ Trigger: CTGGATGTACCTGCCACCTCATGACCCCCACGTGGG...CAACAAGGCAGGTGGACATCCTTGTCCCCGGGCCTCACCAGGCCAGTGCCATTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| CDS-3UTR CCA 90 bp | CTCCCAAAGGCTGGGCTCAGACAGGGTCCTCAAACACAAACACTAGCAGGCCCGAGACCTGAGCCAGGCTaGGCAGGTCGGTGCCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPKAGLRQGPQTQTLAGPRPEPG*AGRCRA Trigger: TGCCCGGCACCGACCTGCCCAGCCTGGCTCAGGTCT...CGGGCCTGCTAGTGTTTGTGTTTGAGGACCCTGTCTGAGCCCAGCCTTTGGGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| CDS-3UTR TCA 90 bp | TTCCCGAGGCTTGCCCCTGACCTTACCCATACCATCTCCACACACAGCGGGGCAAGCCGTGGCCAGCGATaGGGCCTGTGCCATAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: FPRLAPDLTHTISTHSGASRGQR*GLCHRN Trigger: GTTTCTATGGCACAGGCCTCATCGCTGGCCACGGCT...TGCCCCGCTGTGTGTGGAGATGGTATGGGTAAGGTCAGGGGCAAGCCTCGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| CDS-3UTR GCA 90 bp | CTAACAGAGCTCGCCGCAGGTTCTGTTACTGCTCCTGACAAAGCCAGCATCCTAATCTCGTCAAAGGCCTaGGGCGACGGCGCGGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LTELAAGSVTAPDKASILISSKA*GDGAAA Trigger: CGCCGCCGCGCCGTCGCCGCAGGCCTTTGACGAGAT...TAGGATGCTGGCTTTGTCAGGAGCAGTAACAGAACCTGCGGCGAGCTCTGTTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| CDS-3UTR CCA 90 bp | GTCACATCCGCCACTGTCCAAAGCTTCTCAGGACTAACAGAGCTCGCCGCAGGTGGTCGTCAGGGTGGCTaGGCGGGAGGTAGATCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VTSATVQSFSGLTELAAGGRQGG*AGGRSV Trigger: GACGGATCTACCTCCCGCCCAGCCACCCTGACGACC...ACCTGCGGCGAGCTCTGTTAGTCCTGAGAAGCTTTGGACAGTGGCGGATGTGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| CDS-3UTR CCA 90 bp | CTCCCAAAGGCTGGGCTCAGACAGGGTCCTCAAACACAAACACTAGCAGGCCCGGGGCTGGTAAAGCCGTaGCCAGCGATGAGGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPKAGLRQGPQTQTLAGPGLVKP*PAMRPV Trigger: CACAGGCCTCATCGCTGGCCACGGCTTTACCAGCCC...CGGGCCTGCTAGTGTTTGTGTTTGAGGACCCTGTCTGAGCCCAGCCTTTGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR CAA 72 bp | TCACCAGGGGCCAGAGTGGCGACTCCCTGGCAATCTTaGGTGGCTCCTAGCAACCAGGACAGAGGCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPGARVATPWQS*VAPSNQDRGHG Trigger: ACCATGGCCTCTGTCCTGGTTGCTAGGAGCCACCAAAGATTGCCAGGGAGTCGCCACTCTGGCCCCTGGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR CAA 72 bp | CCTGGTGAGGCCCGGGGACAAGGATGTCCACCTGCCTaGTTGAGCGGACTTCCAGGGCCTTGCTGTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PGEARGQGCPPA*LSGLPGPCCSL Trigger: TAGAGAACAGCAAGGCCCTGGAAGTCCGCTCAACAAGGCAGGTGGACATCCTTGTCCCCGGGCCTCACCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| CDS-3UTR GCA 90 bp | CATGCTAGCACTTTGTGCTGGTCTCTGTGCAAACACAGAGGACTCCACCACAGAGGCTGGGCAGGTCGGTaGCGGGCAGCGACGCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HASTLCWSLCKHRGLHHRGWAGR*RAATRR Trigger: TCTTCGCGTCGCTGCCCGGCACCGACCTGCCCAGCC...TCTGTGGTGGAGTCCTCTGTGTTTGCACAGAGACCAGCACAAAGTGCTAGCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| 3UTR CAA 72 bp | GGTGAGGCCCGGGGACAAGGATGTCCACCTGCCTTGTaGAGCGGACTTCCAGGGCCTTGCTGTTCTCTACAT | + |
|
Preference number: 4 (lower is better) Translates to: GEARGQGCPPAL*SGLPGPCCSLH Trigger: ATGTAGAGAACAGCAAGGCCCTGGAAGTCCGCTCAACAAGGCAGGTGGACATCCTTGTCCCCGGGCCTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| CDS-3UTR TCA 90 bp | AATGCTCCCGGGCACATGGCCACAGAGAAGTATCTAGAAGACTGCCTTCACCTAGGTGCCCCTGGCGCGTaGGCCGTGGAAGCTGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NAPGHMATEKYLEDCLHLGAPGA*AVEAEH Trigger: ATGCTCAGCTTCCACGGCTCACGCGCCAGGGGCACC...TAGGTGAAGGCAGTCTTCTAGATACTTCTCTGTGGCCATGTGCCCGGGAGCATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| CDS-3UTR GCA 90 bp | AATTACAAGAGCAGCCAATGGCACTGGCCTGGTGAGGCCCGGGGACAAGGATGTAGATTCGGCGGAACCTaGTGCAGACCTGAGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NYKSSQWHWPGEARGQGCRFGGT*CRPEPG Trigger: GCCTGGCTCAGGTCTGCAGCAGGTTCCGCCGAATCT...ACATCCTTGTCCCCGGGCCTCACCAGGCCAGTGCCATTGGCTGCTCTTGTAATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| CDS-3UTR GCA 90 bp | GTCACATCCGCCACTGTCCAAAGCTTCTCAGGACTAACAGAGCTCGCCGCAGGTAGATGTCTTCCAGCGTaGGGCCCCACTCCTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VTSATVQSFSGLTELAAGRCLPA*GPTPPS Trigger: TGAGGGAGGAGTGGGGCCGCACGCTGGAAGACATCT...ACCTGCGGCGAGCTCTGTTAGTCCTGAGAAGCTTTGGACAGTGGCGGATGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| CDS-3UTR GCA 90 bp | GAACCAGAAGCGGCCGAAGACACTCAGGGAAAGGTTCTGGGAAATGCACACTTCTGCTCCTGCCGCACCTaGTCCCGGACCTCCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: EPEAAEDTQGKVLGNAHFCSCRT*SRTSRT Trigger: TGTCCTGGAGGTCCGGGAGCAGGTGCGGCAGGAGCA...GAAGTGTGCATTTCCCAGAACCTTTCCCTGAGTGTCTTCGGCCGCTTCTGGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| CDS-3UTR CCA 90 bp | GTGCTGGTCTCTGTGCAAACACAGAGGACTCCACCACAGAAAAGCACCCGGCAGTGGATGTGGCCGTTGTaGGGCCCTTTGTGGCCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VLVSVQTQRTPPQKSTRQWMWPL*GPLWPY Trigger: GTACGGCCACAAAGGGCCCCACAACGGCCACATCCA...CTGCCGGGTGCTTTTCTGTGGTGGAGTCCTCTGTGTTTGCACAGAGACCAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| CDS-3UTR TCA 90 bp | GTCACATCCGCCACTGTCCAAAGCTTCTCAGGACTAACAGAGCTCGCCGCAGGTGTGAGCCGTGGAAGCTaGGCATCACAATCTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VTSATVQSFSGLTELAAGVSRGS*ASQSPA Trigger: GGCTGGAGATTGTGATGCTCAGCTTCCACGGCTCAC...ACCTGCGGCGAGCTCTGTTAGTCCTGAGAAGCTTTGGACAGTGGCGGATGTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| CDS-3UTR GCA 90 bp | CCCACAGTGAAACCCTTCTTGGAAAGTGGGTCATGTGGGCCGGAGGTTGGTACAATCTCTACAGTCTGCTaGCCCGCGGGGATGTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTVKPFLESGSCGPEVGTISTVC*PAGMLG Trigger: CCCCAACATCCCCGCGGGGCAGCAGACTGTAGAGAT...TGTACCAACCTCCGGCCCACATGACCCACTTTCCAAGAAGGGTTTCACTGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| CDS-3UTR CCA 90 bp | AGGCGATGCAGGTGTCCTGAGGTTCGCAAAGTCCTGACAGCTGAGCAGGATGGGGTGGGGGTCATGAGGTaGCAGGTACATCCAGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RRCRCPEVRKVLTAEQDGVGVMR*QVHPAN Trigger: ATTGGCTGGATGTACCTGCCACCTCATGACCCCCAC...CCCATCCTGCTCAGCTGTCAGGACTTTGCGAACCTCAGGACACCTGCATCGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| CDS-3UTR CCA 90 bp | CTTTGGTGGCTCCTAGCAACCAGGACAGAGGCCATGGTGGAATGCCCTGTCCAACTGGCGCGTGAGCCGTaGAAGCTGAGCATCACAATC | + |
|
Preference number: 4 (lower is better) Translates to: LWWLLATRTEAMVECPVQLAREP*KLSITI Trigger: GATTGTGATGCTCAGCTTCCACGGCTCACGCGCCAG...TTGGACAGGGCATTCCACCATGGCCTCTGTCCTGGTTGCTAGGAGCCACCAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
||
| CDS-3UTR CCA 90 bp | ACACTCAGGGAAAGGTTCTGGGAAATGCACACTTCTGCTTTTCTCCAGGGAAACGGCGCGGCGGCGTTCTaGAAGGTGGCCTGGACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TLRERFWEMHTSAFLQGNGAAAF*KVAWTR Trigger: CCGAGTCCAGGCCACCTTCCAGAACGCCGCCGCGCC...GTTTCCCTGGAGAAAAGCAGAAGTGTGCATTTCCCAGAACCTTTCCCTGAGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS-3UTR TCA 90 bp | CCCACAGTGAAACCCTTCTTGGAAAGTGGGTCATGTGGGCCGGAGGTTGGTACAGGCAAGACACACCTGTaGTCTCCAGCTTCCGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: PTVKPFLESGSCGPEVGTGKTHL*SPASAG Trigger: ACCTGCGGAAGCTGGAGATCACAGGTGTGTCTTGCC...TGTACCAACCTCCGGCCCACATGACCCACTTTCCAAGAAGGGTTTCACTGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS-3UTR GCA 90 bp | CATCCATTTAATTCTCCATGCCACAGGCACCGGTCATTCAGCTCGATCCTGGCTTTCGGCGGAACCTGCTaGAGACCTGAGCCAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: HPFNSPCHRHRSFSSILAFGGTC*RPEPGW Trigger: CCAGCCTGGCTCAGGTCTGCAGCAGGTTCCGCCGAA...AGCCAGGATCGAGCTGAATGACCGGTGCCTGTGGCATGGAGAATTAAATGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS-3UTR GCA 90 bp | GCTGGTCTCTGTGCAAACACAGAGGACTCCACCACAGAAAAGCACCCGGCAGGTCAGATGGTGTCCGTGTaGAAGATTCGGCGGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGLCANTEDSTTEKHPAGQMVSV*KIRRNL Trigger: CAGGTTCCGCCGAATCTTGCACACGGACACCATCTG...ACCTGCCGGGTGCTTTTCTGTGGTGGAGTCCTCTGTGTTTGCACAGAGACCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS-3UTR GCA 90 bp | GTCACATCCGCCACTGTCCAAAGCTTCTCAGGACTAACAGAGCTCGCCGCAGGTGGCCCGATATCTGGCTaGCACAGCCCCAAAATGTGT | + |
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Preference number: 4 (lower is better) Translates to: VTSATVQSFSGLTELAAGGPISG*HSPKMC Trigger: ACACATTTTGGGGCTGTGGCAGCCAGATATCGGGCC...ACCTGCGGCGAGCTCTGTTAGTCCTGAGAAGCTTTGGACAGTGGCGGATGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS-3UTR GCA 90 bp | CTTTGGTGGCTCCTAGCAACCAGGACAGAGGCCATGGTGGAATGCCCTGTCCAATCAATCTCTACAGTCTaGTGCCCCGCGGGGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LWWLLATRTEAMVECPVQSISTV*CPAGML Trigger: CAACATCCCCGCGGGGCAGCAGACTGTAGAGATTGA...TTGGACAGGGCATTCCACCATGGCCTCTGTCCTGGTTGCTAGGAGCCACCAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS-3UTR GCA 90 bp | CCAGATAAACGTGTGGAGGACCAAGGGAGGGCATTCGGCTGCTGGGGACAAGCAATCAGCTCCTGCATGTaGTCGTGGAAGATGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: PDKRVEDQGRAFGCWGQAISSCM*SWKMSS Trigger: GGAAGACATCTTCCACGAGCACATGCAGGAGCTGAT...TGCTTGTCCCCAGCAGCCGAATGCCCTCCCTTGGTCCTCCACACGTTTATCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS-3UTR CCA 90 bp | CTTTGGTGGCTCCTAGCAACCAGGACAGAGGCCATGGTGGAATGCCCTGTCCAATTGTGGGGCCCTTTGTaGCCGTACATACACTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LWWLLATRTEAMVECPVQLWGPL*PYIHST Trigger: AGTGGAGTGTATGTACGGCCACAAAGGGCCCCACAA...TTGGACAGGGCATTCCACCATGGCCTCTGTCCTGGTTGCTAGGAGCCACCAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS-3UTR CCA 90 bp | GTGCTGGTCTCTGTGCAAACACAGAGGACTCCACCACAGAAAAGCACCCGGCAGTCCTGCATGTGCTCGTaGAAGATGTCTTCCAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLVSVQTQRTPPQKSTRQSCMCS*KMSSSV Trigger: CACGCTGGAAGACATCTTCCACGAGCACATGCAGGA...CTGCCGGGTGCTTTTCTGTGGTGGAGTCCTCTGTGTTTGCACAGAGACCAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR CAA 72 bp | CCACCCTCTGTCCAGAACCAGGTGTGTGTGTGTGTGTaGTGTGTGTGTCTGTGTGTGCTCCAGACAAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: PPSVQNQVCVCV*CVCLCVLQTNP Trigger: GGGGTTTGTCTGGAGCACACACAGACACACACACAACACACACACACACACCTGGTTCTGGACAGAGGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS-3UTR GCA 90 bp | AGGCGATGCAGGTGTCCTGAGGTTCGCAAAGTCCTGACAGCTGAGCAGGATGGGATCAGAATCAGCTCCTaGATGTGCTCGTGGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: RRCRCPEVRKVLTAEQDGIRISS*MCSWKM Trigger: CATCTTCCACGAGCACATGCAGGAGCTGATTCTGAT...CCCATCCTGCTCAGCTGTCAGGACTTTGCGAACCTCAGGACACCTGCATCGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS-3UTR CCA 90 bp | CCCGGGCACATGGCCACAGAGAAGTATCTAGAAGACTGCCTTCACCTACAAAGGGTACGGCCCGATATCTaGCTGCCACAGCCCCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PGHMATEKYLEDCLHLQRVRPDI*LPQPQN Trigger: ATTTTGGGGCTGTGGCAGCCAGATATCGGGCCGTAC...CCTTTGTAGGTGAAGGCAGTCTTCTAGATACTTCTCTGTGGCCATGTGCCCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR CAA 72 bp | GTTCCTTCAGTGTCACGACCCACAGTGAAACCCTTCTaGGAAAGTGGGTCATGTGGGCCGGAGGTTGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VPSVSRPTVKPF*ESGSCGPEVGT Trigger: TGTACCAACCTCCGGCCCACATGACCCACTTTCCAAGAAGGGTTTCACTGTGGGTCGTGACACTGAAGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS-3UTR TCA 90 bp | CTAACAGAGCTCGCCGCAGGTTCTGTTACTGCTCCTGACAAAGCCAGCATCCTACCGGACATCCTGTGGTaGTCTGTCTGGTTACACTTG | + |
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Preference number: 4 (lower is better) Translates to: LTELAAGSVTAPDKASILPDILW*SVWLHL Trigger: CAAGTGTAACCAGACAGATCACCACAGGATGTCCGG...TAGGATGCTGGCTTTGTCAGGAGCAGTAACAGAACCTGCGGCGAGCTCTGTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS-3UTR CCA 90 bp | TTCCCGAGGCTTGCCCCTGACCTTACCCATACCATCTCCACACACAGCGGGGCATTCCTCTCCATCAGATaGATTCTAAACAGTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FPRLAPDLTHTISTHSGAFLSIR*ILNSGL Trigger: CAAGCCACTGTTTAGAATCCATCTGATGGAGAGGAA...TGCCCCGCTGTGTGTGGAGATGGTATGGGTAAGGTCAGGGGCAAGCCTCGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS-3UTR CCA 90 bp | TGCAGAGCTGACAGCCCAGAGCAGAGGGGCCCAGAGTCTAAACTCATGTTACAACAGGAGGTGAGAGACTaGATGTTCCTGAGCATCTCG | + |
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Preference number: 4 (lower is better) Translates to: CRADSPEQRGPESKLMLQQEVRD*MFLSIS Trigger: CGAGATGCTCAGGAACATCCAGTCTCTCACCTCCTG...TTGTAACATGAGTTTAGACTCTGGGCCCCTCTGCTCTGGGCTGTCAGCTCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR CAA 72 bp | GAAGTATCTAGAAGACTGCCTTCACCTACAAAGGGCTaGACAGTGCTCGCTGCTGACAAGGTCGTCGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: EVSRRLPSPTKG*TVLAADKVVGV Trigger: GACACCGACGACCTTGTCAGCAGCGAGCACTGTCAAGCCCTTTGTAGGTGAAGGCAGTCTTCTAGATACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| 3UTR CAA 72 bp | CACAAGAAACGGGCTGAGAACGCACATGCTAGCACTTaGTGCTGGTCTCTGTGCAAACACAGAGGACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HKKRAENAHAST*CWSLCKHRGLH Trigger: GTGGAGTCCTCTGTGTTTGCACAGAGACCAGCACAAAGTGCTAGCATGTGCGTTCTCAGCCCGTTTCTTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS-3UTR CCA 90 bp | CATGCTAGCACTTTGTGCTGGTCTCTGTGCAAACACAGAGGACTCCACCACAGATTCACAATCTGGATGTaGCCGTTGTGGGGCCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HASTLCWSLCKHRGLHHRFTIWM*PLWGPL Trigger: CAAAGGGCCCCACAACGGCCACATCCAGATTGTGAA...TCTGTGGTGGAGTCCTCTGTGTTTGCACAGAGACCAGCACAAAGTGCTAGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS-3UTR CCA 90 bp | AATGCTCCCGGGCACATGGCCACAGAGAAGTATCTAGAAGACTGCCTTCACCTACTGTCTGGTTACACTTaGTGGAGAACTCGTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NAPGHMATEKYLEDCLHLLSGYT*WRTRPS Trigger: AGAGGGACGAGTTCTCCACCAAGTGTAACCAGACAG...TAGGTGAAGGCAGTCTTCTAGATACTTCTCTGTGGCCATGTGCCCGGGAGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS-3UTR CCA 90 bp | ACACTCAGGGAAAGGTTCTGGGAAATGCACACTTCTGCTTTTCTCCAGGGAAACTTCTGGAAGGTGGCCTaGACTCGGCTGTACAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLRERFWEMHTSAFLQGNFWKVA*TRLYKL Trigger: CAGCTTGTACAGCCGAGTCCAGGCCACCTTCCAGAA...GTTTCCCTGGAGAAAAGCAGAAGTGTGCATTTCCCAGAACCTTTCCCTGAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS-3UTR TCA 90 bp | CCCGGGCACATGGCCACAGAGAAGTATCTAGAAGACTGCCTTCACCTACAAAGGACTGACTGGTGTAGATaGACTTCATCAGAATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGHMATEKYLEDCLHLQRTDWCR*TSSESA Trigger: AGCTGATTCTGATGAAGTTCATCTACACCAGTCAGT...CCTTTGTAGGTGAAGGCAGTCTTCTAGATACTTCTCTGTGGCCATGTGCCCGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS GCA 90 bp | CAGGCGGGAGCTCCAGCAGAGAGCAACGCGCCGGCCCCGCCTCGATaGGCTCCTCCTCGGGGTCCGTGTCCGCCTCACTGTCCGCCGCCG | + |
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Preference number: 5 (lower is better) Translates to: QAGAPAESNAPAPPR*APPRGPCPPHCPPP Trigger: CGGCGGCGGACAGTGAGGCGGACACGGACCCCGAGGAGGAGCGCATCGAGGCGGGGCCGGCGCGTTGCTCTCTGCTGGAGCTCCCGCCTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059018.14 ENSMUST00000212985.2 |
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| CDS TCA 90 bp | AGGCTCTTTGCCGTCCTTAGCAGGTGGCCCATCAGCGGCCTTGGCTaGAGGCTCCCGGGGTGGCGCGGCGCCCTCGCCGGCCTCCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: RLFAVLSRWPISGLG*RLPGWRGALAGLLL Trigger: GAGCAGGAGGCCGGCGAGGGCGCCGCGCCACCCCGGGAGCCTTCAGCCAAGGCCGCTGATGGGCCACCTGCTAAGGACGGCAAAGAGCCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS GCA 90 bp | TTCGGCGGAACCTGCTGCAGACCTGAGCCAGGCTGGGCAGGTCGGTaGCGGGCAGCGACGCGAAGATCTCCACGAGCAGCTCAGGCGGGA | + |
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Preference number: 5 (lower is better) Translates to: FGGTCCRPEPGWAGR*RAATRRSPRAAQAG Trigger: TCCCGCCTGAGCTGCTCGTGGAGATCTTCGCGTCGCTGCCCGGCACCGACCTGCCCAGCCTGGCTCAGGTCTGCAGCAGGTTCCGCCGAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059018.14 ENSMUST00000212985.2 |
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| CDS GCA 90 bp | GCCGTCTCCAGATGGTGTCCGTGTGCAAGATTCGGCGGAACCTGCTaGAGACCTGAGCCAGGCTGGGCAGGTCGGTGCCGGGCAGCGACG | + |
|
Preference number: 5 (lower is better) Translates to: AVSRWCPCARFGGTC*RPEPGWAGRCRAAT Trigger: CGTCGCTGCCCGGCACCGACCTGCCCAGCCTGGCTCAGGTCTGCAGCAGGTTCCGCCGAATCTTGCACACGGACACCATCTGGAGACGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059018.14 ENSMUST00000212985.2 |
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| CDS GCA 90 bp | AGCGCCGTCTCCAGATGGTGTCCGTGTGCAAGATTCGGCGGAACCTaGTGCAGACCTGAGCCAGGCTGGGCAGGTCGGTGCCGGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SAVSRWCPCARFGGT*CRPEPGWAGRCRAA Trigger: CGCTGCCCGGCACCGACCTGCCCAGCCTGGCTCAGGTCTGCAGCAGGTTCCGCCGAATCTTGCACACGGACACCATCTGGAGACGGCGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059018.14 ENSMUST00000212985.2 |
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| CDS CCA 90 bp | CCGTGTGCAAGATTCGGCGGAACCTGCTGCAGACCTGAGCCAGGCTaGGCAGGTCGGTGCCGGGCAGCGACGCGAAGATCTCCACGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PCARFGGTCCRPEPG*AGRCRAATRRSPRA Trigger: TGCTCGTGGAGATCTTCGCGTCGCTGCCCGGCACCGACCTGCCCAGCCTGGCTCAGGTCTGCAGCAGGTTCCGCCGAATCTTGCACACGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059018.14 ENSMUST00000212985.2 |
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| CDS GCA 90 bp | TCGTTCCTCGAGCTGACACCCACAGGAAGCACAAACGGCTGCCCCTaGCCAGACGAGGCCGACTGCTCAGCTGCCTCGGCTCCACCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SFLELTPTGSTNGCP*PDEADCSAASAPPP Trigger: TGGAGGTGGAGCCGAGGCAGCTGAGCAGTCGGCCTCGTCTGGGCAGGGGCAGCCGTTTGTGCTTCCTGTGGGTGTCAGCTCGAGGAACGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS GCA 90 bp | CAGGAGGTGAGAGACTGGATGTTCCTGAGCATCTCGTCAAAGGCCTaGGGCGACGGCGCGGCGGCGTTCTGGAAGGTGGCCTGGACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: QEVRDWMFLSISSKA*GDGAAAFWKVAWTR Trigger: CCGAGTCCAGGCCACCTTCCAGAACGCCGCCGCGCCGTCGCCGCAGGCCTTTGACGAGATGCTCAGGAACATCCAGTCTCTCACCTCCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS TCA 90 bp | GCCGCACCTGCTCCCGGACCTCCAGGACAATCCTGGAGAGCTCGTTaGAGTTTCGGAGGTTCTCCACGTCCGGCAGCTGGATGCGGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: AAPAPGPPGQSWRAR*SFGGSPRPAAGCGA Trigger: AGCGCCGCATCCAGCTGCCGGACGTGGAGAACCTCCGAAACTTCAACGAGCTCTCCAGGATTGTCCTGGAGGTCCGGGAGCAGGTGCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS GCA 90 bp | TTGAAGTTTCGGAGGTTCTCCACGTCCGGCAGCTGGATGCGGCGCTaGAGGTCAATCTCTACAGTCTGCTGCCCCGCGGGGATGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LKFRRFSTSGSWMRR*RSISTVCCPAGMLG Trigger: CCCCAACATCCCCGCGGGGCAGCAGACTGTAGAGATTGACCTGCAGCGCCGCATCCAGCTGCCGGACGTGGAGAACCTCCGAAACTTCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CCA 90 bp | CTGGAGAGCTCGTTGAAGTTTCGGAGGTTCTCCACGTCCGGCAGCTaGATGCGGCGCTGCAGGTCAATCTCTACAGTCTGCTGCCCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: LESSLKFRRFSTSGS*MRRCRSISTVCCPA Trigger: CGCGGGGCAGCAGACTGTAGAGATTGACCTGCAGCGCCGCATCCAGCTGCCGGACGTGGAGAACCTCCGAAACTTCAACGAGCTCTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CCA 90 bp | TCAAAGGCCTGCGGCGACGGCGCGGCGGCGTTCTGGAAGGTGGCCTaGACTCGGCTGTACAAGCTGAAGGACTTCAATTCCAGCCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: SKACGDGAAAFWKVA*TRLYKLKDFNSSHR Trigger: TCTGTGGCTGGAATTGAAGTCCTTCAGCTTGTACAGCCGAGTCCAGGCCACCTTCCAGAACGCCGCCGCGCCGTCGCCGCAGGCCTTTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CCA 90 bp | CTGAGCATCTCGTCAAAGGCCTGCGGCGACGGCGCGGCGGCGTTCTaGAAGGTGGCCTGGACTCGGCTGTACAAGCTGAAGGACTTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: LSISSKACGDGAAAF*KVAWTRLYKLKDFN Trigger: ATTGAAGTCCTTCAGCTTGTACAGCCGAGTCCAGGCCACCTTCCAGAACGCCGCCGCGCCGTCGCCGCAGGCCTTTGACGAGATGCTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS TCA 90 bp | AGAAACATAGGCGGCAAGTGCGGGGGTAATCCTCGTTCCTCGAGCTaGCACCCACAGGAAGCACAAACGGCTGCCCCTGCCCAGACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RNIGGKCGGNPRSSS*HPQEAQTAAPAQTR Trigger: CCTCGTCTGGGCAGGGGCAGCCGTTTGTGCTTCCTGTGGGTGTCAGCTCGAGGAACGAGGATTACCCCCGCACTTGCCGCCTATGTTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS GCA 90 bp | TCAGAATCAGCTCCTGCATGTGCTCGTGGAAGATGTCTTCCAGCGTaGGGCCCCACTCCTCCCTCAGCCACGTCCGAAACTCCTCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SESAPACARGRCLPA*GPTPPSATSETPPA Trigger: GGCAGGAGGAGTTTCGGACGTGGCTGAGGGAGGAGTGGGGCCGCACGCTGGAAGACATCTTCCACGAGCACATGCAGGAGCTGATTCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CCA 90 bp | CAGTGGCTTGAACCGCATGGGGTCTCCCACGTGGGGGTCATGAGGTaGCAGGTACATCCAGCCAATGATGAACAGTCCGTCCACCACGAC | + |
|
Preference number: 5 (lower is better) Translates to: QWLEPHGVSHVGVMR*QVHPANDEQSVHHD Trigger: GTCGTGGTGGACGGACTGTTCATCATTGGCTGGATGTACCTGCCACCTCATGACCCCCACGTGGGAGACCCCATGCGGTTCAAGCCACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS-3UTR CAA 90 bp | GTGCTGGTCTCTGTGCAAACACAGAGGACTCCACCACAGAAAAGCACCCGGCAGTTGAAGAGGCCGGGCTaGATGAGGTCGTCAGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VLVSVQTQRTPPQKSTRQLKRPG*MRSSGW Trigger: CCACCCTGACGACCTCATCAAGCCCGGCCTCTTCAA...CTGCCGGGTGCTTTTCTGTGGTGGAGTCCTCTGTGTTTGCACAGAGACCAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS TCA 90 bp | GCGCGGCGGCGTTCTGGAAGGTGGCCTGGACTCGGCTGTACAAGCTaGAGGACTTCAATTCCAGCCACAGAAATCCAAAGCGGTCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: ARRRSGRWPGLGCTS*RTSIPATEIQSGPH Trigger: ATGAGGACCGCTTTGGATTTCTGTGGCTGGAATTGAAGTCCTTCAGCTTGTACAGCCGAGTCCAGGCCACCTTCCAGAACGCCGCCGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CCA 90 bp | TCCGTCCACCACGACGTTCAGCAATCCTCCGTACGGCCCGATATCTaGCTGCCACAGCCCCAAAATGTGTCTGTATCGGTGAAGCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SVHHDVQQSSVRPDI*LPQPQNVSVSVKQA Trigger: TGCCTGCTTCACCGATACAGACACATTTTGGGGCTGTGGCAGCCAGATATCGGGCCGTACGGAGGATTGCTGAACGTCGTGGTGGACGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212985.2 |
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| CDS-3UTR CAA 90 bp | CACCCGGCAGGTTCCTTCAGTGTCACGACCCACAGTGAAACCCTTCTTGGAAAGCCGTTGTGGGGCCCTTaGTGGCCGTACATACACTCC | + |
|
Preference number: 5 (lower is better) Translates to: HPAGSFSVTTHSETLLGKPLWGP*WPYIHS Trigger: GGAGTGTATGTACGGCCACAAAGGGCCCCACAACGG...CTTTCCAAGAAGGGTTTCACTGTGGGTCGTGACACTGAAGGAACCTGCCGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS-3UTR CAA 90 bp | GCTCGATCCTGGCTCAACTCCGTTTATTTTCTCACCATGCTTAGCGTTCTCCTTGGGTCGCCCGTGATCTaGGTGCCCCTGGCGCGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ARSWLNSVYFLTMLSVLLGSPVI*VPLARE Trigger: CTCACGCGCCAGGGGCACCAAGATCACGGGCGACCC...AAGGAGAACGCTAAGCATGGTGAGAAAATAAACGGAGTTGAGCCAGGATCGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS TCA 90 bp | AGCCACGTCCGAAACTCCTCCTGCCTCCCACCGGACATCCTGTGGTaGTCTGTCTGGTTACACTTGGTGGAGAACTCGTCCCTCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SHVRNSSCLPPDILW*SVWLHLVENSSLFT Trigger: TGTGAAGAGGGACGAGTTCTCCACCAAGTGTAACCAGACAGATCACCACAGGATGTCCGGTGGGAGGCAGGAGGAGTTTCGGACGTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CCA 90 bp | CTCCACTGTAGCCGACTTCCTCTCCATCAGATGGATTCTAAACAGTaGCTTGAACCGCATGGGGTCTCCCACGTGGGGGTCATGAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LHCSRLPLHQMDSKQ*LEPHGVSHVGVMRW Trigger: CCACCTCATGACCCCCACGTGGGAGACCCCATGCGGTTCAAGCCACTGTTTAGAATCCATCTGATGGAGAGGAAGTCGGCTACAGTGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CCA 90 bp | GCCTCCCACCGGACATCCTGTGGTGATCTGTCTGGTTACACTTGGTaGAGAACTCGTCCCTCTTCACAATCTGGATGTGGCCGTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ASHRTSCGDLSGYTW*RTRPSSQSGCGRCG Trigger: CCCACAACGGCCACATCCAGATTGTGAAGAGGGACGAGTTCTCCACCAAGTGTAACCAGACAGATCACCACAGGATGTCCGGTGGGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS-3UTR CAA 90 bp | CATCCATTTAATTCTCCATGCCACAGGCACCGGTCATTCAGCTCGATCCTGGCTATCTGGATGTGGCCGTaGTGGGGCCCTTTGTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: HPFNSPCHRHRSFSSILAIWMWP*WGPLWP Trigger: CGGCCACAAAGGGCCCCACAACGGCCACATCCAGAT...AGCCAGGATCGAGCTGAATGACCGGTGCCTGTGGCATGGAGAATTAAATGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CCA 90 bp | TCCGTCCACCACGACGTTCAGCAATCCTCCGTACGGCCCGATATCTaGCTGCCACAGCCCCAAAATGTGTCTGTATCGGTGAAGCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: SVHHDVQQSSVRPDI*LPQPQNVSVSVKQF Trigger: AAACTGCTTCACCGATACAGACACATTTTGGGGCTGTGGCAGCCAGATATCGGGCCGTACGGAGGATTGCTGAACGTCGTGGTGGACGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CCA 90 bp | TCGTCCCTCTTCACAATCTGGATGTGGCCGTTGTGGGGCCCTTTGTaGCCGTACATACACTCCACTGTAGCCGACTTCCTCTCCATCAGA | + |
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Preference number: 5 (lower is better) Translates to: SSLFTIWMWPLWGPL*PYIHSTVADFLSIR Trigger: TCTGATGGAGAGGAAGTCGGCTACAGTGGAGTGTATGTACGGCCACAAAGGGCCCCACAACGGCCACATCCAGATTGTGAAGAGGGACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS-3UTR CAA 90 bp | TGGCAATCTTTGGTGGCTCCTAGCAACCAGGACAGAGGCCATGGTGGAATGCCCTCTGTCTGGTTACACTaGGTGGAGAACTCGTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: WQSLVAPSNQDRGHGGMPSVWLH*VENSSL Trigger: GAGGGACGAGTTCTCCACCAAGTGTAACCAGACAGA...GGGCATTCCACCATGGCCTCTGTCCTGGTTGCTAGGAGCCACCAAAGATTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS TCA 90 bp | ATCGGTGAAGCAGTTTTGCATAGACGTCCCGGCAAGACACACCTGTaGTCTCCAGCTTCCGCAGGTTCTCACAAACGCCATACTCCTCGC | + |
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Preference number: 5 (lower is better) Translates to: IGEAVLHRRPGKTHL*SPASAGSHKRHTPR Trigger: GCGAGGAGTATGGCGTTTGTGAGAACCTGCGGAAGCTGGAGATCACAGGTGTGTCTTGCCGGGACGTCTATGCAAAACTGCTTCACCGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CCA 90 bp | TGGCCGTACATACACTCCACTGTAGCCGACTTCCTCTCCATCAGATaGATTCTAAACAGTGGCTTGAACCGCATGGGGTCTCCCACGTGG | + |
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Preference number: 5 (lower is better) Translates to: WPYIHSTVADFLSIR*ILNSGLNRMGSPTW Trigger: CCACGTGGGAGACCCCATGCGGTTCAAGCCACTGTTTAGAATCCATCTGATGGAGAGGAAGTCGGCTACAGTGGAGTGTATGTACGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS TCA 90 bp | GAGGATTTATACGTTTTGCATAGACGTCCCGGCAAGACACACCTGTaGTCTCCAGCTTCCGCAGGTTCTCACAAACGCCATACTCCTCGC | + |
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Preference number: 5 (lower is better) Translates to: EDLYVLHRRPGKTHL*SPASAGSHKRHTPR Trigger: GCGAGGAGTATGGCGTTTGTGAGAACCTGCGGAAGCTGGAGATCACAGGTGTGTCTTGCCGGGACGTCTATGCAAAACGTATAAATCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212985.2 |
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| CDS-3UTR CAA 90 bp | CATCCATTTAATTCTCCATGCCACAGGCACCGGTCATTCAGCTCGATCCTGGCTATCGGTGAAGCAGTTTaGCATAGACGTCCCGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: HPFNSPCHRHRSFSSILAIGEAV*HRRPGK Trigger: CTTGCCGGGACGTCTATGCAAAACTGCTTCACCGAT...AGCCAGGATCGAGCTGAATGACCGGTGCCTGTGGCATGGAGAATTAAATGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS TCA 90 bp | AGATCCGTCGGTAGGTCAGGCAGTTGTCGTACTGACTGGTGTAGATaGACTTCATCAGAATCAGCTCCTGCATGTGCTCGTGGAAGATGT | + |
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Preference number: 5 (lower is better) Translates to: RSVGRSGSCRTDWCR*TSSESAPACARGRC Trigger: ACATCTTCCACGAGCACATGCAGGAGCTGATTCTGATGAAGTTCATCTACACCAGTCAGTACGACAACTGCCTGACCTACCGACGGATCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS TCA 72 bp | GCCGTCCTTAGCAGGTGGCCCATCAGCGGCCTTGGCTaGAGGCTCCCGGGGTGGCGCGGCGCCCTCGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: AVLSRWPISGLG*RLPGWRGALAG Trigger: GCCGGCGAGGGCGCCGCGCCACCCCGGGAGCCTTCAGCCAAGGCCGCTGATGGGCCACCTGCTAAGGACGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CAA 90 bp | CCTCCAGGCTCTTTGCCGTCCTTAGCAGGTGGCCCATCAGCGGCCTaGGCTGAAGGCTCCCGGGGTGGCGCGGCGCCCTCGCCGGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PPGSLPSLAGGPSAA*AEGSRGGAAPSPAS Trigger: GGAGGCCGGCGAGGGCGCCGCGCCACCCCGGGAGCCTTCAGCCAAGGCCGCTGATGGGCCACCTGCTAAGGACGGCAAAGAGCCTGGAGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS GCA 72 bp | CGGAGGTTCTCCACGTCCGGCAGCTGGATGCGGCGCTaGAGGTCAATCTCTACAGTCTGCTGCCCCGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: RRFSTSGSWMRR*RSISTVCCPAG Trigger: CCCCGCGGGGCAGCAGACTGTAGAGATTGACCTGCAGCGCCGCATCCAGCTGCCGGACGTGGAGAACCTCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CAA 90 bp | GACGAGGCCGACTGCTCAGCTGCCTCGGCTCCACCTCCAGGCTCTTaGCCGTCCTTAGCAGGTGGCCCATCAGCGGCCTTGGCTGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: DEADCSAASAPPPGS*PSLAGGPSAALAEG Trigger: GCCTTCAGCCAAGGCCGCTGATGGGCCACCTGCTAAGGACGGCAAAGAGCCTGGAGGTGGAGCCGAGGCAGCTGAGCAGTCGGCCTCGTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CCA 72 bp | TCGTCAAAGGCCTGCGGCGACGGCGCGGCGGCGTTCTaGAAGGTGGCCTGGACTCGGCTGTACAAGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: SSKACGDGAAAF*KVAWTRLYKLK Trigger: CTTCAGCTTGTACAGCCGAGTCCAGGCCACCTTCCAGAACGCCGCCGCGCCGTCGCCGCAGGCCTTTGACGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS TCA 72 bp | GTTGGGGTCGCCCGTGATCTTGGTGCCCCTGGCGCGTaGGCCGTGGAAGCTGAGCATCACAATCTCCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: VGVARDLGAPGA*AVEAEHHNLQP Trigger: GGGCTGGAGATTGTGATGCTCAGCTTCCACGGCTCACGCGCCAGGGGCACCAAGATCACGGGCGACCCCAAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS TCA 72 bp | GGCGGCAAGTGCGGGGGTAATCCTCGTTCCTCGAGCTaGCACCCACAGGAAGCACAAACGGCTGCCCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: GGKCGGNPRSSS*HPQEAQTAAPA Trigger: GGCAGGGGCAGCCGTTTGTGCTTCCTGTGGGTGTCAGCTCGAGGAACGAGGATTACCCCCGCACTTGCCGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS GCA 72 bp | AGAGACTGGATGTTCCTGAGCATCTCGTCAAAGGCCTaGGGCGACGGCGCGGCGGCGTTCTGGAAGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: RDWMFLSISSKA*GDGAAAFWKVA Trigger: GGCCACCTTCCAGAACGCCGCCGCGCCGTCGCCGCAGGCCTTTGACGAGATGCTCAGGAACATCCAGTCTCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CCA 72 bp | TCGCCCGTGATCTTGGTGCCCCTGGCGCGTGAGCCGTaGAAGCTGAGCATCACAATCTCCAGCCCGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SPVILVPLAREP*KLSITISSPWL Trigger: CAGCCACGGGCTGGAGATTGTGATGCTCAGCTTCCACGGCTCACGCGCCAGGGGCACCAAGATCACGGGCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CAA 72 bp | GACTGCTCAGCTGCCTCGGCTCCACCTCCAGGCTCTTaGCCGTCCTTAGCAGGTGGCCCATCAGCGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: DCSAASAPPPGS*PSLAGGPSAAL Trigger: CAAGGCCGCTGATGGGCCACCTGCTAAGGACGGCAAAGAGCCTGGAGGTGGAGCCGAGGCAGCTGAGCAGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CAA 90 bp | TGCCGCACCTGCTCCCGGACCTCCAGGACAATCCTGGAGAGCTCGTaGAAGTTTCGGAGGTTCTCCACGTCCGGCAGCTGGATGCGGCGC | + |
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Preference number: 6 (lower is better) Translates to: CRTCSRTSRTILESS*KFRRFSTSGSWMRR Trigger: GCGCCGCATCCAGCTGCCGGACGTGGAGAACCTCCGAAACTTCAACGAGCTCTCCAGGATTGTCCTGGAGGTCCGGGAGCAGGTGCGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS GCA 72 bp | TCCAGATGGTGTCCGTGTGCAAGATTCGGCGGAACCTaGTGCAGACCTGAGCCAGGCTGGGCAGGTCGGTGC | + |
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Preference number: 6 (lower is better) Translates to: SRWCPCARFGGT*CRPEPGWAGRC Trigger: GCACCGACCTGCCCAGCCTGGCTCAGGTCTGCAGCAGGTTCCGCCGAATCTTGCACACGGACACCATCTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059018.14 ENSMUST00000212985.2 |
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| CDS GCA 72 bp | TGGATGCGGCGCTGCAGGTCAATCTCTACAGTCTGCTaGCCCGCGGGGATGTTGGGGTCGCCCGTGATCTTG | + |
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Preference number: 6 (lower is better) Translates to: WMRRCRSISTVC*PAGMLGSPVIL Trigger: CAAGATCACGGGCGACCCCAACATCCCCGCGGGGCAGCAGACTGTAGAGATTGACCTGCAGCGCCGCATCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CCA 72 bp | TGCGGCGACGGCGCGGCGGCGTTCTGGAAGGTGGCCTaGACTCGGCTGTACAAGCTGAAGGACTTCAATTCC | + |
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Preference number: 6 (lower is better) Translates to: CGDGAAAFWKVA*TRLYKLKDFNS Trigger: GGAATTGAAGTCCTTCAGCTTGTACAGCCGAGTCCAGGCCACCTTCCAGAACGCCGCCGCGCCGTCGCCGCA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS TCA 72 bp | GCTCCCGGACCTCCAGGACAATCCTGGAGAGCTCGTTaGAGTTTCGGAGGTTCTCCACGTCCGGCAGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: APGPPGQSWRAR*SFGGSPRPAAG Trigger: TCCAGCTGCCGGACGTGGAGAACCTCCGAAACTTCAACGAGCTCTCCAGGATTGTCCTGGAGGTCCGGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CAA 72 bp | TGCTCCCGGACCTCCAGGACAATCCTGGAGAGCTCGTaGAAGTTTCGGAGGTTCTCCACGTCCGGCAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: CSRTSRTILESS*KFRRFSTSGSW Trigger: CCAGCTGCCGGACGTGGAGAACCTCCGAAACTTCAACGAGCTCTCCAGGATTGTCCTGGAGGTCCGGGAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CCA 72 bp | GAACCGCATGGGGTCTCCCACGTGGGGGTCATGAGGTaGCAGGTACATCCAGCCAATGATGAACAGTCCGTC | + |
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Preference number: 6 (lower is better) Translates to: EPHGVSHVGVMR*QVHPANDEQSV Trigger: GACGGACTGTTCATCATTGGCTGGATGTACCTGCCACCTCATGACCCCCACGTGGGAGACCCCATGCGGTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059018.14 ENSMUST00000212985.2 |
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| CDS TCA 72 bp | CGAAACTCCTCCTGCCTCCCACCGGACATCCTGTGGTaGTCTGTCTGGTTACACTTGGTGGAGAACTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: RNSSCLPPDILW*SVWLHLVENSS Trigger: GGACGAGTTCTCCACCAAGTGTAACCAGACAGATCACCACAGGATGTCCGGTGGGAGGCAGGAGGAGTTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CCA 72 bp | CACGACGTTCAGCAATCCTCCGTACGGCCCGATATCTaGCTGCCACAGCCCCAAAATGTGTCTGTATCGGTG | + |
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Preference number: 6 (lower is better) Translates to: HDVQQSSVRPDI*LPQPQNVSVSV Trigger: CACCGATACAGACACATTTTGGGGCTGTGGCAGCCAGATATCGGGCCGTACGGAGGATTGCTGAACGTCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059018.14 ENSMUST00000212985.2 |
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| CDS CCA 72 bp | AGCCGACTTCCTCTCCATCAGATGGATTCTAAACAGTaGCTTGAACCGCATGGGGTCTCCCACGTGGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: SRLPLHQMDSKQ*LEPHGVSHVGV Trigger: GACCCCCACGTGGGAGACCCCATGCGGTTCAAGCCACTGTTTAGAATCCATCTGATGGAGAGGAAGTCGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CAA 90 bp | AACTCGTCCCTCTTCACAATCTGGATGTGGCCGTTGTGGGGCCCTTaGTGGCCGTACATACACTCCACTGTAGCCGACTTCCTCTCCATC | + |
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Preference number: 6 (lower is better) Translates to: NSSLFTIWMWPLWGP*WPYIHSTVADFLSI Trigger: GATGGAGAGGAAGTCGGCTACAGTGGAGTGTATGTACGGCCACAAAGGGCCCCACAACGGCCACATCCAGATTGTGAAGAGGGACGAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CCA 72 bp | TTCACAATCTGGATGTGGCCGTTGTGGGGCCCTTTGTaGCCGTACATACACTCCACTGTAGCCGACTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: FTIWMWPLWGPL*PYIHSTVADFL Trigger: GAGGAAGTCGGCTACAGTGGAGTGTATGTACGGCCACAAAGGGCCCCACAACGGCCACATCCAGATTGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CAA 72 bp | CTCTTCACAATCTGGATGTGGCCGTTGTGGGGCCCTTaGTGGCCGTACATACACTCCACTGTAGCCGACTTC | + |
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Preference number: 6 (lower is better) Translates to: LFTIWMWPLWGP*WPYIHSTVADF Trigger: GAAGTCGGCTACAGTGGAGTGTATGTACGGCCACAAAGGGCCCCACAACGGCCACATCCAGATTGTGAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CAA 72 bp | GAGAACTCGTCCCTCTTCACAATCTGGATGTGGCCGTaGTGGGGCCCTTTGTGGCCGTACATACACTCCACT | + |
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Preference number: 6 (lower is better) Translates to: ENSSLFTIWMWP*WGPLWPYIHST Trigger: AGTGGAGTGTATGTACGGCCACAAAGGGCCCCACAACGGCCACATCCAGATTGTGAAGAGGGACGAGTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS TCA 72 bp | GCAGTTTTGCATAGACGTCCCGGCAAGACACACCTGTaGTCTCCAGCTTCCGCAGGTTCTCACAAACGCCAT | + |
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Preference number: 6 (lower is better) Translates to: AVLHRRPGKTHL*SPASAGSHKRH Trigger: ATGGCGTTTGTGAGAACCTGCGGAAGCTGGAGATCACAGGTGTGTCTTGCCGGGACGTCTATGCAAAACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CCA 72 bp | AACTCGTCCCTCTTCACAATCTGGATGTGGCCGTTGTaGGGCCCTTTGTGGCCGTACATACACTCCACTGTA | + |
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Preference number: 6 (lower is better) Translates to: NSSLFTIWMWPL*GPLWPYIHSTV Trigger: TACAGTGGAGTGTATGTACGGCCACAAAGGGCCCCACAACGGCCACATCCAGATTGTGAAGAGGGACGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS TCA 72 bp | CGTTCTGGAAGGTGGCCTGGACTCGGCTGTACAAGCTaGAGGACTTCAATTCCAGCCACAGAAATCCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: RSGRWPGLGCTS*RTSIPATEIQS Trigger: GCTTTGGATTTCTGTGGCTGGAATTGAAGTCCTTCAGCTTGTACAGCCGAGTCCAGGCCACCTTCCAGAACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS TCA 72 bp | TACGTTTTGCATAGACGTCCCGGCAAGACACACCTGTaGTCTCCAGCTTCCGCAGGTTCTCACAAACGCCAT | + |
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Preference number: 6 (lower is better) Translates to: YVLHRRPGKTHL*SPASAGSHKRH Trigger: ATGGCGTTTGTGAGAACCTGCGGAAGCTGGAGATCACAGGTGTGTCTTGCCGGGACGTCTATGCAAAACGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212985.2 |
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| CDS CCA 72 bp | CGGACATCCTGTGGTGATCTGTCTGGTTACACTTGGTaGAGAACTCGTCCCTCTTCACAATCTGGATGTGGC | + |
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Preference number: 6 (lower is better) Translates to: RTSCGDLSGYTW*RTRPSSQSGCG Trigger: GCCACATCCAGATTGTGAAGAGGGACGAGTTCTCCACCAAGTGTAACCAGACAGATCACCACAGGATGTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CCA 72 bp | CACCGGACATCCTGTGGTGATCTGTCTGGTTACACTTaGTGGAGAACTCGTCCCTCTTCACAATCTGGATGT | + |
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Preference number: 6 (lower is better) Translates to: HRTSCGDLSGYT*WRTRPSSQSGC Trigger: ACATCCAGATTGTGAAGAGGGACGAGTTCTCCACCAAGTGTAACCAGACAGATCACCACAGGATGTCCGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS TCA 72 bp | GGTAGGTCAGGCAGTTGTCGTACTGACTGGTGTAGATaGACTTCATCAGAATCAGCTCCTGCATGTGCTCGT | + |
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Preference number: 6 (lower is better) Translates to: GRSGSCRTDWCR*TSSESAPACAR Trigger: ACGAGCACATGCAGGAGCTGATTCTGATGAAGTTCATCTACACCAGTCAGTACGACAACTGCCTGACCTACC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS CCA 72 bp | ATACACTCCACTGTAGCCGACTTCCTCTCCATCAGATaGATTCTAAACAGTGGCTTGAACCGCATGGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: IHSTVADFLSIR*ILNSGLNRMGS Trigger: AGACCCCATGCGGTTCAAGCCACTGTTTAGAATCCATCTGATGGAGAGGAAGTCGGCTACAGTGGAGTGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059018.14 |
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| CDS TCA 72 bp | TGTACTCCATGTGCTCATAATCGGGGAGAATTTTCATaGAGCGTCCTGACTTCACTCGAGGATTTATACGTT | + |
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Preference number: 6 (lower is better) Translates to: CTPCAHNRGEFS*SVLTSLEDLYV Trigger: AACGTATAAATCCTCGAGTGAAGTCAGGACGCTTCATGAAAATTCTCCCCGATTATGAGCACATGGAGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212985.2 |
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