Pregenerated sensors for FBXO3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027180Ensembl transcript IDs: ENSMUST00000028603.10, ENSMUST00000102565.4, ENSMUST00000111135.8, ENSMUST00000111136.8
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACGCTCATATAGGTTCTGGGCTAACCAAGAATGGAAGTCTGGTCTaGTGTTGGCCAAGAATGGAAGTCTGGTCTGGTGTAGGCATGGTG | + |
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Preference number: 1 (lower is better) Translates to: HAHIGSGLTKNGSLV*CWPRMEVWSGVGMV Trigger: CACCATGCCTACACCAGACCAGACTTCCATTCTTGGCCAACACCAGACCAGACTTCCATTCTTGGTTAGCCCAGAACCTATATGAGCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| 3UTR CCA 90 bp | CATATAGGTTCTGGGCTAACCAAGAATGGAAGTCTGGTCTGGTGTTaGCCAAGAATGGAAGTCTGGTCTGGTGTAGGCATGGTGCACACA | + |
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Preference number: 1 (lower is better) Translates to: HIGSGLTKNGSLVWC*PRMEVWSGVGMVHT Trigger: TGTGTGCACCATGCCTACACCAGACCAGACTTCCATTCTTGGCCAACACCAGACCAGACTTCCATTCTTGGTTAGCCCAGAACCTATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| 3UTR GCA 90 bp | ATAAGCAGTGCAAACTTGCTAGAAGAGATTCTTCAAACATGCAGCTaGCTTGAGTTTCCCAGGAACCCCAATGCTTGTGAGTCCTCCCCC | + |
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Preference number: 1 (lower is better) Translates to: ISSANLLEEILQTCS*LEFPRNPNACESSP Trigger: GGGGGAGGACTCACAAGCATTGGGGTTCCTGGGAAACTCAAGGCAGCTGCATGTTTGAAGAATCTCTTCTAGCAAGTTTGCACTGCTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| 3UTR GCA 90 bp | GGTTATATAAGCAGTGCAAACTTGCTAGAAGAGATTCTTCAAACATaGAGCTGCCTTGAGTTTCCCAGGAACCCCAATGCTTGTGAGTCC | + |
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Preference number: 1 (lower is better) Translates to: GYISSANLLEEILQT*SCLEFPRNPNACES Trigger: GGACTCACAAGCATTGGGGTTCCTGGGAAACTCAAGGCAGCTGCATGTTTGAAGAATCTCTTCTAGCAAGTTTGCACTGCTTATATAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| 3UTR CCA 90 bp | TCTGAATGGACCAGCTATACTCAGGCTGTAAGCCAGCAAGCACCATaGCCATCTTCCAGCTTAAGAACAAAAGCTCAATACTATCTATGG | + |
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Preference number: 1 (lower is better) Translates to: SEWTSYTQAVSQQAP*PSSSLRTKAQYYLW Trigger: CCATAGATAGTATTGAGCTTTTGTTCTTAAGCTGGAAGATGGCCATGGTGCTTGCTGGCTTACAGCCTGAGTATAGCTGGTCCATTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| 3UTR TCA 90 bp | CACAAGAGAAAAATGATACATTCAACAGATGTGGTATACAGAAGATaGGGCTGCCGCGGGCTTCTGTTGAAACACCATGCGATTGTACTC | + |
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Preference number: 1 (lower is better) Translates to: HKRKMIHSTDVVYRR*GCRGLLLKHHAIVL Trigger: GAGTACAATCGCATGGTGTTTCAACAGAAGCCCGCGGCAGCCTCATCTTCTGTATACCACATCTGTTGAATGTATCATTTTTCTCTTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| 3UTR TCA 90 bp | CTGCATACAGTGCACAACAGCTCAGCATCATTCTTATCTTTCAAATaGGAGATGAGAATGGGTCCTCTTCCAGGAAGGTTACTGGCTTGT | + |
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Preference number: 1 (lower is better) Translates to: LHTVHNSSASFLSFK*EMRMGPLPGRLLAC Trigger: ACAAGCCAGTAACCTTCCTGGAAGAGGACCCATTCTCATCTCTCATTTGAAAGATAAGAATGATGCTGAGCTGTTGTGCACTGTATGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| 3UTR CCA 90 bp | ACTATCTCAAGCCCTCCTCTCATCCCCTTTACCCAAGAAAGAAAATaGAAGTCTATTCCAGAGAGTAGCAAGTTCTCCATGCTGAGAACA | + |
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Preference number: 1 (lower is better) Translates to: TISSPPLIPFTQERK*KSIPESSKFSMLRT Trigger: TGTTCTCAGCATGGAGAACTTGCTACTCTCTGGAATAGACTTCCATTTTCTTTCTTGGGTAAAGGGGATGAGAGGAGGGCTTGAGATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| 3UTR TCA 90 bp | AAACAAAGGAACTCCTGTTCTTTAGCTAGAGAGCTGCTCTCCCATTaGCCCCTGGAAGAGAAAACAAACAATTCCCATTTGTTCCTCTAC | + |
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Preference number: 1 (lower is better) Translates to: KQRNSCSLARELLSH*PLEEKTNNSHLFLY Trigger: GTAGAGGAACAAATGGGAATTGTTTGTTTTCTCTTCCAGGGGTCAATGGGAGAGCAGCTCTCTAGCTAAAGAACAGGAGTTCCTTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| 3UTR CCA 90 bp | AGCTGTCAATCATCCATGTTCCTGTTAGTAATCCTGATAATTTGTTaGCCCACCAGGCTGAGCTTGGATGGATTTCTTTGGTCTGTTATT | + |
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Preference number: 1 (lower is better) Translates to: SCQSSMFLLVILIIC*PTRLSLDGFLWSVI Trigger: AATAACAGACCAAAGAAATCCATCCAAGCTCAGCCTGGTGGGCCAACAAATTATCAGGATTACTAACAGGAACATGGATGATTGACAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| 3UTR CCA 90 bp | AGAGGATTCAAGATTCTGAGATTTATGACCAAACACCTCTCCCAGTaGTTATATAAGCAGTGCAAACTTGCTAGAAGAGATTCTTCAAAC | + |
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Preference number: 1 (lower is better) Translates to: RGFKILRFMTKHLSQ*LYKQCKLARRDSSN Trigger: GTTTGAAGAATCTCTTCTAGCAAGTTTGCACTGCTTATATAACCACTGGGAGAGGTGTTTGGTCATAAATCTCAGAATCTTGAATCCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| 3UTR TCA 90 bp | AAAGAAAATGGAAGTCTATTCCAGAGAGTAGCAAGTTCTCCATGCTaGGAACAACATTACTCACAAATGTGGACTAGTATAGGTCCTTTT | + |
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Preference number: 1 (lower is better) Translates to: KENGSLFQRVASSPC*EQHYSQMWTSIGPF Trigger: AAAAGGACCTATACTAGTCCACATTTGTGAGTAATGTTGTTCTCAGCATGGAGAACTTGCTACTCTCTGGAATAGACTTCCATTTTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| 3UTR-3UTR TCA 90 bp | AAACATGCAGCTGCCTTGAGTTTCCCAGGAACCCCAATGCTTGTGAGTCCTCCCAACATGCAGCTGCCTTaGGTTTCCCAGGAACCCCAA | + |
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Preference number: 2 (lower is better) Translates to: KHAAALSFPGTPMLVSPPNMQLP*VSQEPQ Trigger: TTGGGGTTCCTGGGAAACTCAAGGCAGCTGCATGTT...GGGAGGACTCACAAGCATTGGGGTTCCTGGGAAACTCAAGGCAGCTGCATGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| 3UTR-3UTR GCA 90 bp | AACCTAGATGGAATAGAGGAGGGCTTGCTCTGGCGAGTAACCGCTCTCCACACCGCTGTAGGCAAACCCTaGTTTGGCAGTGGTCATCAT | + |
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Preference number: 2 (lower is better) Translates to: NLDGIEEGLLWRVTALHTAVGKP*FGSGHH Trigger: ATGATGACCACTGCCAAAGCAGGGTTTGCCTACAGC...GGTGTGGAGAGCGGTTACTCGCCAGAGCAAGCCCTCCTCTATTCCATCTAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCATCAAGCTGACCCTGCTCGGCTGCCTGCCTGCCCATGCATTACCTCAATGCCACACTGCATACAGTaGACAACAGCTCAGCATCAT | + |
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Preference number: 2 (lower is better) Translates to: KHQADPARLPACPCITSMPHCIQ*TTAQHH Trigger: ATGATGCTGAGCTGTTGTGCACTGTATGCAGTGTGG...CATTGAGGTAATGCATGGGCAGGCAGGCAGCCGAGCAGGGTCAGCTTGATGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCATCAAGCTGACCCTGCTCGGCTGCCTGCCTGCCCATGCATTACCTCAATGCACACATCTAGCACTTaGGAGGCTGAGGCAAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: KHQADPARLPACPCITSMHTSST*EAEARK Trigger: TTTTCTTGCCTCAGCCTCCCAAGTGCTAGATGTGTG...CATTGAGGTAATGCATGGGCAGGCAGGCAGCCGAGCAGGGTCAGCTTGATGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCATCAAGCTGACCCTGCTCGGCTGCCTGCCTGCCCATGCATTACCTCAATGCGCTCATATAGGTTCTaGGCTAACCAAGAATGGAAG | + |
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Preference number: 2 (lower is better) Translates to: KHQADPARLPACPCITSMRSYRF*ANQEWK Trigger: CTTCCATTCTTGGTTAGCCCAGAACCTATATGAGCG...CATTGAGGTAATGCATGGGCAGGCAGGCAGCCGAGCAGGGTCAGCTTGATGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| 3UTR CAA 90 bp | TCATATAGGTTCTGGGCTAACCAAGAATGGAAGTCTGGTCTGGTGTaGGCCAAGAATGGAAGTCTGGTCTGGTGTAGGCATGGTGCACAC | + |
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Preference number: 2 (lower is better) Translates to: SYRFWANQEWKSGLV*AKNGSLVWCRHGAH Trigger: GTGTGCACCATGCCTACACCAGACCAGACTTCCATTCTTGGCCAACACCAGACCAGACTTCCATTCTTGGTTAGCCCAGAACCTATATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCATCAAGCTGACCCTGCTCGGCTGCCTGCCTGCCCATGCATTACCTCAATGTTCTTATCTTTCAAATaGGAGATGAGAATGGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: KHQADPARLPACPCITSMFLSFK*EMRMGP Trigger: AGGACCCATTCTCATCTCTCATTTGAAAGATAAGAA...CATTGAGGTAATGCATGGGCAGGCAGGCAGCCGAGCAGGGTCAGCTTGATGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| 3UTR-3UTR GCA 90 bp | AAGATGAGGCTGCCGCGGGCTTCTGTTGAAACACCATGCGATTGTACTCTTTTACCTGCAGTCTCTTTCTaGCCTTGGGTGGGTGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: KMRLPRASVETPCDCTLLPAVSF*PWVGVF Trigger: AAAAACACCCACCCAAGGGCAGAAAGAGACTGCAGG...TAAAAGAGTACAATCGCATGGTGTTTCAACAGAAGCCCGCGGCAGCCTCATCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| 3UTR-3UTR GCA 90 bp | GGCAAACCCTGCTTTGGCAGTGGTCATCATGCTGTTGAGGACACATTTTTGTCAACAGTCAGTCCTTCCTaGAGTCTCTTTCTGCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: GKPCFGSGHHAVEDTFLSTVSPS*SLFLPL Trigger: CAAGGGCAGAAAGAGACTGCAGGAAGGACTGACTGT...TGACAAAAATGTGTCCTCAACAGCATGATGACCACTGCCAAAGCAGGGTTTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| 3UTR-3UTR TCA 90 bp | AACCTAGATGGAATAGAGGAGGGCTTGCTCTGGCGAGTAACCGCTCTCCACACCAGCACAAGAGAAAAATaGTACATTCAACAGATGTGG | + |
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Preference number: 2 (lower is better) Translates to: NLDGIEEGLLWRVTALHTSTREK*YIQQMW Trigger: CCACATCTGTTGAATGTATCATTTTTCTCTTGTGCT...GGTGTGGAGAGCGGTTACTCGCCAGAGCAAGCCCTCCTCTATTCCATCTAGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| 3UTR-3UTR TCA 90 bp | CGCTCATATAGGTTCTGGGCTAACCAAGAATGGAAGTCTGGTCTGGTGTTGGCCGCAAGTTCTCCATGCTaGGAACAACATTACTCACAA | + |
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Preference number: 2 (lower is better) Translates to: RSYRFWANQEWKSGLVLAASSPC*EQHYSQ Trigger: TTGTGAGTAATGTTGTTCTCAGCATGGAGAACTTGC...GGCCAACACCAGACCAGACTTCCATTCTTGGTTAGCCCAGAACCTATATGAGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| 3UTR-3UTR GCA 90 bp | GTACAGCTAATTCCTATTCATAGAAACAGCCTCCTGATGGGAGTAGGAAGGCTCGCTGTAGGCAAACCCTaGTTTGGCAGTGGTCATCAT | + |
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Preference number: 2 (lower is better) Translates to: VQLIPIHRNSLLMGVGRLAVGKP*FGSGHH Trigger: ATGATGACCACTGCCAAAGCAGGGTTTGCCTACAGC...GAGCCTTCCTACTCCCATCAGGAGGCTGTTTCTATGAATAGGAATTAGCTGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| 3UTR-3UTR CCA 90 bp | GTACAGCTAATTCCTATTCATAGAAACAGCCTCCTGATGGGAGTAGGAAGGCTCAGCCAGCAAGCACCATaGCCATCTTCCAGCTTAAGA | + |
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Preference number: 2 (lower is better) Translates to: VQLIPIHRNSLLMGVGRLSQQAP*PSSSLR Trigger: TCTTAAGCTGGAAGATGGCCATGGTGCTTGCTGGCT...GAGCCTTCCTACTCCCATCAGGAGGCTGTTTCTATGAATAGGAATTAGCTGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTGGCCAAGAATGGAAGTCTGGTCTGGTGTAGGCATGGTGCACACATCTAGCTTCCAGGAAGGTTACTaGCTTGTCCACTTTTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: CWPRMEVWSGVGMVHTSSFQEGY*LVHFSR Trigger: TCTAGAAAAGTGGACAAGCCAGTAACCTTCCTGGAA...GCTAGATGTGTGCACCATGCCTACACCAGACCAGACTTCCATTCTTGGCCAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| 3UTR CAA 90 bp | CAAATGAGAGATGAGAATGGGTCCTCTTCCAGGAAGGTTACTGGCTaGTCCACTTTTCTAGAATTACCTCAAACCTACCCACTCCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: QMRDENGSSSRKVTG*STFLELPQTYPLQE Trigger: CTCCTGGAGTGGGTAGGTTTGAGGTAATTCTAGAAAAGTGGACAAGCCAGTAACCTTCCTGGAAGAGGACCCATTCTCATCTCTCATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTGGCCAAGAATGGAAGTCTGGTCTGGTGTAGGCATGGTGCACACATCTAGCTACGTCTGGTTGATGTaGAAAACAATCCAAGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: CWPRMEVWSGVGMVHTSSYVWLM*KTIQED Trigger: GTCTTCTTGGATTGTTTTTCACATCAACCAGACGTA...GCTAGATGTGTGCACCATGCCTACACCAGACCAGACTTCCATTCTTGGCCAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| 3UTR-3UTR GCA 90 bp | AATGTATTTTATACAAACCTAGATGGAATAGAGGAGGGCTTGCTCTGGCGAGTAACAGTCAGTCCTTCCTaGAGTCTCTTTCTGCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: NVFYTNLDGIEEGLLWRVTVSPS*SLFLPL Trigger: CAAGGGCAGAAAGAGACTGCAGGAAGGACTGACTGT...TACTCGCCAGAGCAAGCCCTCCTCTATTCCATCTAGGTTTGTATAAAATACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| 3UTR-3UTR GCA 90 bp | AGTTGCAGCTGTCAATCATCCATGTTCCTGTTAGTAATCCTGATAATTTGTTGGAGTCCTCCCCCAGGCTaGTATGTTGTTCCTCAGTTG | + |
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Preference number: 2 (lower is better) Translates to: SCSCQSSMFLLVILIICWSPPPG*YVVPQL Trigger: CAACTGAGGAACAACATAGCAGCCTGGGGGAGGACT...CCAACAAATTATCAGGATTACTAACAGGAACATGGATGATTGACAGCTGCAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAAACCCTGCTTTGGCAGTGGTCATCATGCTGTTGAGGACACATTTTTGTCATCTCCCATTGACCCCTaGAAGAGAAAACAAACAATT | + |
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Preference number: 2 (lower is better) Translates to: GKPCFGSGHHAVEDTFLSSPIDP*KRKQTI Trigger: AATTGTTTGTTTTCTCTTCCAGGGGTCAATGGGAGA...TGACAAAAATGTGTCCTCAACAGCATGATGACCACTGCCAAAGCAGGGTTTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| 3UTR-3UTR CCA 90 bp | CGCTCATATAGGTTCTGGGCTAACCAAGAATGGAAGTCTGGTCTGGTGTTGGCCTTTAAGTGGTCTGATTaGTCCTTCACATCTTCTAAT | + |
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Preference number: 2 (lower is better) Translates to: RSYRFWANQEWKSGLVLAFKWSD*SFTSSN Trigger: ATTAGAAGATGTGAAGGACCAATCAGACCACTTAAA...GGCCAACACCAGACCAGACTTCCATTCTTGGTTAGCCCAGAACCTATATGAGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| 3UTR-3UTR CCA 90 bp | CGCTCATATAGGTTCTGGGCTAACCAAGAATGGAAGTCTGGTCTGGTGTTGGCCAAAGTCAATTTTAAGTaGTCTGATTGGTCCTTCACA | + |
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Preference number: 2 (lower is better) Translates to: RSYRFWANQEWKSGLVLAKVNFK*SDWSFT Trigger: TGTGAAGGACCAATCAGACCACTTAAAATTGACTTT...GGCCAACACCAGACCAGACTTCCATTCTTGGTTAGCCCAGAACCTATATGAGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| 3UTR CAA 90 bp | CAGCTGTCAATCATCCATGTTCCTGTTAGTAATCCTGATAATTTGTaGGCCCACCAGGCTGAGCTTGGATGGATTTCTTTGGTCTGTTAT | + |
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Preference number: 2 (lower is better) Translates to: QLSIIHVPVSNPDNL*AHQAELGWISLVCY Trigger: ATAACAGACCAAAGAAATCCATCCAAGCTCAGCCTGGTGGGCCAACAAATTATCAGGATTACTAACAGGAACATGGATGATTGACAGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| 3UTR-3UTR TCA 90 bp | GTGACTGTGTTGCCAGGTAATTTTATCACTGTGCAAAGACCACAAAATGTATTTGAGCTGCTCTCCCATTaGCCCCTGGAAGAGAAAACA | + |
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Preference number: 2 (lower is better) Translates to: VTVLPGNFITVQRPQNVFELLSH*PLEEKT Trigger: TGTTTTCTCTTCCAGGGGTCAATGGGAGAGCAGCTC...AAATACATTTTGTGGTCTTTGCACAGTGATAAAATTACCTGGCAACACAGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| 3UTR-3UTR GCA 90 bp | GTGACTGTGTTGCCAGGTAATTTTATCACTGTGCAAAGACCACAAAATGTATTTCCTGTTCTTGTCCTCTaGGGGTGCAGCTATGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: VTVLPGNFITVQRPQNVFPVLVL*GCSYGE Trigger: TTCACCATAGCTGCACCCGCAGAGGACAAGAACAGG...AAATACATTTTGTGGTCTTTGCACAGTGATAAAATTACCTGGCAACACAGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| 3UTR-3UTR CCA 90 bp | CGTAGAATAATTCTACGTAACGATACACTATCTCAAGCCCTCCTCTCATCCCCTTTCCAGGAAGGTTACTaGCTTGTCCACTTTTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: RRIILRNDTLSQALLSSPFQEGY*LVHFSR Trigger: TCTAGAAAAGTGGACAAGCCAGTAACCTTCCTGGAA...AGGGGATGAGAGGAGGGCTTGAGATAGTGTATCGTTACGTAGAATTATTCTACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| 3UTR-3UTR TCA 90 bp | GTACAGCTAATTCCTATTCATAGAAACAGCCTCCTGATGGGAGTAGGAAGGCTCCTTCCGGCTATATGCTaGGCACAATTATTTACATTA | + |
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Preference number: 2 (lower is better) Translates to: VQLIPIHRNSLLMGVGRLLPAIC*AQLFTL Trigger: TAATGTAAATAATTGTGCTCAGCATATAGCCGGAAG...GAGCCTTCCTACTCCCATCAGGAGGCTGTTTCTATGAATAGGAATTAGCTGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGAGAACGGTCATAGCGTAAGAACTTTAACTTTTAAAGCCCAAAGTTATGTTGAGCTGCTCTCCCATTaGCCCCTGGAAGAGAAAACA | + |
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Preference number: 2 (lower is better) Translates to: CENGHSVRTLTFKAQSYVELLSH*PLEEKT Trigger: TGTTTTCTCTTCCAGGGGTCAATGGGAGAGCAGCTC...AACATAACTTTGGGCTTTAAAAGTTAAAGTTCTTACGCTATGACCGTTCTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| 3UTR-3UTR TCA 90 bp | GTACAGCTAATTCCTATTCATAGAAACAGCCTCCTGATGGGAGTAGGAAGGCTCTCTCCTTCCTTATACTaGCTAATCAACAAAGCATCT | + |
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Preference number: 2 (lower is better) Translates to: VQLIPIHRNSLLMGVGRLSPSLY*LINKAS Trigger: AGATGCTTTGTTGATTAGTCAGTATAAGGAAGGAGA...GAGCCTTCCTACTCCCATCAGGAGGCTGTTTCTATGAATAGGAATTAGCTGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| 3UTR-3UTR GCA 90 bp | TGTTGTCTACATCCTGTCTCCTTCCTTATACTGACTAATCAACAAAGCATCTTTGGGATTACAGGTATGTaGCACCATGGCCTGGCTATA | + |
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Preference number: 2 (lower is better) Translates to: CCLHPVSFLILTNQQSIFGITGM*HHGLAI Trigger: TATAGCCAGGCCATGGTGGCACATACCTGTAATCCC...AAAGATGCTTTGTTGATTAGTCAGTATAAGGAAGGAGACAGGATGTAGACAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| 3UTR-3UTR CCA 90 bp | GTACAGCTAATTCCTATTCATAGAAACAGCCTCCTGATGGGAGTAGGAAGGCTCTACATTCAACAGATGTaGTATACAGAAGATGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: VQLIPIHRNSLLMGVGRLYIQQM*YTEDEA Trigger: AGCCTCATCTTCTGTATACCACATCTGTTGAATGTA...GAGCCTTCCTACTCCCATCAGGAGGCTGTTTCTATGAATAGGAATTAGCTGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| 3UTR-3UTR TCA 90 bp | AGTTGCAGCTGTCAATCATCCATGTTCCTGTTAGTAATCCTGATAATTTGTTGGTTTTGTCACGTCAGGTaGTTACAAACAAGGGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: SCSCQSSMFLLVILIICWFCHVR*LQTRVS Trigger: GGAGACCCTTGTTTGTAATCACCTGACGTGACAAAA...CCAACAAATTATCAGGATTACTAACAGGAACATGGATGATTGACAGCTGCAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTGTCTACATCCTGTCTCCTTCCTTATACTGACTAATCAACAAAGCATCTTTTTTTGTCACGTCAGGTaGTTACAAACAAGGGTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: CCLHPVSFLILTNQQSIFFCHVR*LQTRVS Trigger: GGAGACCCTTGTTTGTAATCACCTGACGTGACAAAA...AAAGATGCTTTGTTGATTAGTCAGTATAAGGAAGGAGACAGGATGTAGACAACA 40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR-3UTR CCA 90 bp | AATGTATTTTATACAAACCTAGATGGAATAGAGGAGGGCTTGCTCTGGCGAGTATCTCCCATTGACCCCTaGAAGAGAAAACAAACAATT | + |
|
Preference number: 2 (lower is better) Translates to: NVFYTNLDGIEEGLLWRVSPIDP*KRKQTI Trigger: AATTGTTTGTTTTCTCTTCCAGGGGTCAATGGGAGA...TACTCGCCAGAGCAAGCCCTCCTCTATTCCATCTAGGTTTGTATAAAATACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR-3UTR CCA 90 bp | CGTAGAATAATTCTACGTAACGATACACTATCTCAAGCCCTCCTCTCATCCCCTTTTAAGTGGTCTGATTaGTCCTTCACATCTTCTAAT | + |
|
Preference number: 2 (lower is better) Translates to: RRIILRNDTLSQALLSSPFKWSD*SFTSSN Trigger: ATTAGAAGATGTGAAGGACCAATCAGACCACTTAAA...AGGGGATGAGAGGAGGGCTTGAGATAGTGTATCGTTACGTAGAATTATTCTACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| 3UTR-3UTR GCA 90 bp | AATGACAAGGAAGTGTGGGGCCAGCTTTGTCATGGTTTCTTAATTGCTACTTTAGTAATGATAAAAATTTaGAACTCAGGTCGGTGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: NDKEVWGQLCHGFLIATLVMIKI*NSGRCD Trigger: GTCACACCGACCTGAGTTGCAAATTTTTATCATTAC...TAAAGTAGCAATTAAGAAACCATGACAAAGCTGGCCCCACACTTCCTTGTCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR-3UTR CCA 90 bp | AATGACAAGGAAGTGTGGGGCCAGCTTTGTCATGGTTTCTTAATTGCTACTTTAGCTCAATACTATCTATaGGAAATAGGCACTTACACA | + |
|
Preference number: 2 (lower is better) Translates to: NDKEVWGQLCHGFLIATLAQYYL*EIGTYT Trigger: TGTGTAAGTGCCTATTTCCCATAGATAGTATTGAGC...TAAAGTAGCAATTAAGAAACCATGACAAAGCTGGCCCCACACTTCCTTGTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGCCATCTTCCAGCTTAAGAACAAAAGCTCAATACTATCTATGGGAAATAGGCGCTCAATACTATCTATaGGAAATAGGCACTTACACA | + |
|
Preference number: 2 (lower is better) Translates to: WPSSSLRTKAQYYLWEIGAQYYL*EIGTYT Trigger: TGTGTAAGTGCCTATTTCCCATAGATAGTATTGAGC...GCCTATTTCCCATAGATAGTATTGAGCTTTTGTTCTTAAGCTGGAAGATGGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGTCATGGTTTCTTAATTGCTACTTTACTGGGAAAGTCCTTTTAAAGGGGGTTGGATTCATCCATGTCTaGAGAGTCATCATTTTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LSWFLNCYFTGKVLLKGVGFIHV*RVIIFF Trigger: GAAGAAAATGATGACTCTGCAGACATGGATGAATCC...AACCCCCTTTAAAAGGACTTTCCCAGTAAAGTAGCAATTAAGAAACCATGACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111136.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTTGTCTACATCCTGTCTCCTTCCTTATACTGACTAATCAACAAAGCATCTTTCTTCCGGCTATATGCTaGGCACAATTATTTACATTA | + |
|
Preference number: 2 (lower is better) Translates to: CCLHPVSFLILTNQQSIFLPAIC*AQLFTL Trigger: TAATGTAAATAATTGTGCTCAGCATATAGCCGGAAG...AAAGATGCTTTGTTGATTAGTCAGTATAAGGAAGGAGACAGGATGTAGACAACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTTTACCCACAAGTTTGCAGGTTTATCACTTCCTTTCAAATTCTCTAATGATCGTAATGATAAAAATTTaGAACTCAGGTCGGTGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: PLPTSLQVYHFLSNSLMIVMIKI*NSGRCD Trigger: GTCACACCGACCTGAGTTGCAAATTTTTATCATTAC...GATCATTAGAGAATTTGAAAGGAAGTGATAAACCTGCAAACTTGTGGGTAAAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGTCATGGTTTCTTAATTGCTACTTTACTGGGAAAGTCCTTTTAAAGGGGGTTTACATTCAACAGATGTaGTATACAGAAGATGAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: LSWFLNCYFTGKVLLKGVYIQQM*YTEDEA Trigger: AGCCTCATCTTCTGTATACCACATCTGTTGAATGTA...AACCCCCTTTAAAAGGACTTTCCCAGTAAAGTAGCAATTAAGAAACCATGACAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTTGCAGCTGTCAATCATCCATGTTCCTGTTAGTAATCCTGATAATTTGTTGGTTTTACTTTGTAGCCTaGGCTAATTTCAAACTCACT | + |
|
Preference number: 2 (lower is better) Translates to: SCSCQSSMFLLVILIICWFYFVA*ANFKLT Trigger: AGTGAGTTTGAAATTAGCCCAGGCTACAAAGTAAAA...CCAACAAATTATCAGGATTACTAACAGGAACATGGATGATTGACAGCTGCAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGCTACTGTTGTACCTATCACAAGGTAACCTTAAGATTGAGATTTGTAAAATAAAAGTCAATTTTAAGTaGTCTGATTGGTCCTTCACA | + |
|
Preference number: 2 (lower is better) Translates to: GLLLYLSQGNLKIEICKIKVNFK*SDWSFT Trigger: TGTGAAGGACCAATCAGACCACTTAAAATTGACTTT...TATTTTACAAATCTCAATCTTAAGGTTACCTTGTGATAGGTACAACAGTAGCCC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| 3UTR CCA 72 bp | AGGGCATCCAATAATGCTAGTGGCCTCCATGGGCACTaGGCACCCAAGTGGTGCACAGATATACACAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: RASNNASGLHGH*APKWCTDIHRG Trigger: CCCTCTGTGTATATCTGTGCACCACTTGGGTGCCCAGTGCCCATGGAGGCCACTAGCATTATTGGATGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028603.10 |
||
| 3UTR GCA 72 bp | CCAGGAACCCCAATGCTTGTGAGTCCTCCCCCAGGCTaGTATGTTGTTCCTCAGTTGCAGCTGTCAATCATC | + |
|
Preference number: 3 (lower is better) Translates to: PGTPMLVSPPPG*YVVPQLQLSII Trigger: GATGATTGACAGCTGCAACTGAGGAACAACATAGCAGCCTGGGGGAGGACTCACAAGCATTGGGGTTCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR CCA 72 bp | GGAAGTCTGGTCTGGTGTTGGCCAAGAATGGAAGTCTaGTCTGGTGTAGGCATGGTGCACACATCTAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: GSLVWCWPRMEV*SGVGMVHTSST Trigger: AGTGCTAGATGTGTGCACCATGCCTACACCAGACCAGACTTCCATTCTTGGCCAACACCAGACCAGACTTCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCACTCCAGGAGCTGGGAGGGCGTCTTCTAAGCATTCAATGTCTACAACTCAGCAGGCCACACAGCTATaGTTGGGAACAGTGGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PTPGAGRASSKHSMSTTQQATQL*LGTVEK Trigger: TTTTTCCACTGTTCCCAACAATAGCTGTGTGGCCTG...CTGAGTTGTAGACATTGAATGCTTAGAAGACGCCCTCCCAGCTCCTGGAGTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| 3UTR GCA 72 bp | GCTCCAGTAACTTACGTCCTACCTGTTCTTGTCCTCTaGGGGTGCAGCTATGGTGAAGCGGCTGACTTAATA | + |
|
Preference number: 3 (lower is better) Translates to: APVTYVLPVLVL*GCSYGEAADLI Trigger: TATTAAGTCAGCCGCTTCACCATAGCTGCACCCGCAGAGGACAAGAACAGGTAGGACGTAAGTTACTGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR CCA 72 bp | TCTGGGCTAACCAAGAATGGAAGTCTGGTCTGGTGTTaGCCAAGAATGGAAGTCTGGTCTGGTGTAGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: SGLTKNGSLVWC*PRMEVWSGVGM Trigger: CATGCCTACACCAGACCAGACTTCCATTCTTGGCCAACACCAGACCAGACTTCCATTCTTGGTTAGCCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| 3UTR GCA 72 bp | GTAACTTACGTCCTACCTGTTCTTGTCCTCTGCGGGTaGAGCTATGGTGAAGCGGCTGACTTAATAAGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: VTYVLPVLVLCG*SYGEAADLISS Trigger: ACTGCTTATTAAGTCAGCCGCTTCACCATAGCTGCACCCGCAGAGGACAAGAACAGGTAGGACGTAAGTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR GCA 72 bp | GGTCTAGTCTTCTCTTTCAACGCTGTAGGCAAACCCTaGTTTGGCAGTGGTCATCATGCTGTTGAGGACACA | + |
|
Preference number: 3 (lower is better) Translates to: GLVFSFNAVGKP*FGSGHHAVEDT Trigger: TGTGTCCTCAACAGCATGATGACCACTGCCAAAGCAGGGTTTGCCTACAGCGTTGAAAGAGAAGACTAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR CCA 72 bp | TATACAAACCTAGATGGAATAGAGGAGGGCTTGCTCTaGCGAGTAACCGCTCTCCACACCCACTTTTCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: YTNLDGIEEGLL*RVTALHTHFSS Trigger: GCTAGAAAAGTGGGTGTGGAGAGCGGTTACTCGCCAGAGCAAGCCCTCCTCTATTCCATCTAGGTTTGTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCATTTGTTCCTCTACCTACAAGCACAAAGTCAAGCAAAGCGATCCAACGCAGAGCTGCTCTCCCATaGACCCCTGGAAGAGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: FPFVPLPTSTKSSKAIQRRAALP*TPGREN Trigger: GTTTTCTCTTCCAGGGGTCAATGGGAGAGCAGCTCT...GCGTTGGATCGCTTTGCTTGACTTTGTGCTTGTAGGTAGAGGAACAAATGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR-3UTR CAA 90 bp | GTACAGCTAATTCCTATTCATAGAAACAGCCTCCTGATGGGAGTAGGAAGGCTCAAACATGCAGCTGCCTaGAGTTTCCCAGGAACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: VQLIPIHRNSLLMGVGRLKHAAA*SFPGTP Trigger: TGGGGTTCCTGGGAAACTCAAGGCAGCTGCATGTTT...GAGCCTTCCTACTCCCATCAGGAGGCTGTTTCTATGAATAGGAATTAGCTGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR CCA 72 bp | ATAGGTTCTGGGCTAACCAAGAATGGAAGTCTGGTCTaGTGTTGGCCAAGAATGGAAGTCTGGTCTGGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: IGSGLTKNGSLV*CWPRMEVWSGV Trigger: TACACCAGACCAGACTTCCATTCTTGGCCAACACCAGACCAGACTTCCATTCTTGGTTAGCCCAGAACCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGTATTTTATACAAACCTAGATGGAATAGAGGAGGGCTTGCTCTGGCGAGTAACGTCCTACCTGTTCTaGTCCTCTGCGGGTGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: NVFYTNLDGIEEGLLWRVTSYLF*SSAGAA Trigger: AGCTGCACCCGCAGAGGACAAGAACAGGTAGGACGT...TACTCGCCAGAGCAAGCCCTCCTCTATTCCATCTAGGTTTGTATAAAATACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACATGCAGCTGCCTTGAGTTTCCCAGGAACCCCAATGCTTGTGAGTCCTCCCCTTGGGTGGGTGTTTTaGTTACATATAAAATCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: KHAAALSFPGTPMLVSPPLGWVF*LHIKSS Trigger: TGAGGATTTTATATGTAACAAAAACACCCACCCAAG...GGGAGGACTCACAAGCATTGGGGTTCCTGGGAAACTCAAGGCAGCTGCATGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR GCA 72 bp | AGCAGTGCAAACTTGCTAGAAGAGATTCTTCAAACATaGAGCTGCCTTGAGTTTCCCAGGAACCCCAATGCT | + |
|
Preference number: 3 (lower is better) Translates to: SSANLLEEILQT*SCLEFPRNPNA Trigger: AGCATTGGGGTTCCTGGGAAACTCAAGGCAGCTGCATGTTTGAAGAATCTCTTCTAGCAAGTTTGCACTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR CCA 72 bp | ACCAGCTATACTCAGGCTGTAAGCCAGCAAGCACCATaGCCATCTTCCAGCTTAAGAACAAAAGCTCAATAC | + |
|
Preference number: 3 (lower is better) Translates to: TSYTQAVSQQAP*PSSSLRTKAQY Trigger: GTATTGAGCTTTTGTTCTTAAGCTGGAAGATGGCCATGGTGCTTGCTGGCTTACAGCCTGAGTATAGCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR TCA 72 bp | AAAATGATACATTCAACAGATGTGGTATACAGAAGATaGGGCTGCCGCGGGCTTCTGTTGAAACACCATGCG | + |
|
Preference number: 3 (lower is better) Translates to: KMIHSTDVVYRR*GCRGLLLKHHA Trigger: CGCATGGTGTTTCAACAGAAGCCCGCGGCAGCCTCATCTTCTGTATACCACATCTGTTGAATGTATCATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR TCA 72 bp | AGGCAAACCCTGCTTTGGCAGTGGTCATCATGCTGTTaGGGACACATTTTTGTCACGTCAGGTGATTACAAA | + |
|
Preference number: 3 (lower is better) Translates to: RQTLLWQWSSCC*GHIFVTSGDYK Trigger: TTTGTAATCACCTGACGTGACAAAAATGTGTCCTCAACAGCATGATGACCACTGCCAAAGCAGGGTTTGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR CCA 72 bp | TTTAAGGATAGGATGGTACCACGCTCATATAGGTTCTaGGCTAACCAAGAATGGAAGTCTGGTCTGGTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: FKDRMVPRSYRF*ANQEWKSGLVL Trigger: CAACACCAGACCAGACTTCCATTCTTGGTTAGCCCAGAACCTATATGAGCGTGGTACCATCCTATCCTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| 3UTR-3UTR CAA 90 bp | GTACAGCTAATTCCTATTCATAGAAACAGCCTCCTGATGGGAGTAGGAAGGCTCGTTGAGGACACATTTTaGTCACGTCAGGTGATTACA | + |
|
Preference number: 3 (lower is better) Translates to: VQLIPIHRNSLLMGVGRLVEDTF*SRQVIT Trigger: TGTAATCACCTGACGTGACAAAAATGTGTCCTCAAC...GAGCCTTCCTACTCCCATCAGGAGGCTGTTTCTATGAATAGGAATTAGCTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR GCA 72 bp | GTCTTTGCACAGTCAGTCCTTCCTGCAGTCTCTTTCTaGCCTTGGGTGGGTGTTTTTGTTACATATAAAATC | + |
|
Preference number: 3 (lower is better) Translates to: VFAQSVLPAVSF*PWVGVFVTYKI Trigger: GATTTTATATGTAACAAAAACACCCACCCAAGGGCAGAAAGAGACTGCAGGAAGGACTGACTGTGCAAAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR CCA 72 bp | TCATCCATGTTCCTGTTAGTAATCCTGATAATTTGTTaGCCCACCAGGCTGAGCTTGGATGGATTTCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SSMFLLVILIIC*PTRLSLDGFLW Trigger: CCAAAGAAATCCATCCAAGCTCAGCCTGGTGGGCCAACAAATTATCAGGATTACTAACAGGAACATGGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR CCA 72 bp | GCTTCACTGATGAGTATCAACCATTTAAGGATAGGATaGTACCACGCTCATATAGGTTCTGGGCTAACCAAG | + |
|
Preference number: 3 (lower is better) Translates to: ASLMSINHLRIG*YHAHIGSGLTK Trigger: CTTGGTTAGCCCAGAACCTATATGAGCGTGGTACCATCCTATCCTTAAATGGTTGATACTCATCAGTGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGACTGTGTTGCCAGGTAATTTTATCACTGTGCAAAGACCACAAAATGTATTTAGAGCTGCTCTCCCATaGACCCCTGGAAGAGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: VTVLPGNFITVQRPQNVFRAALP*TPGREN Trigger: GTTTTCTCTTCCAGGGGTCAATGGGAGAGCAGCTCT...AAATACATTTTGTGGTCTTTGCACAGTGATAAAATTACCTGGCAACACAGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR TCA 72 bp | CAAACAAGGGTCTCCAGATCTGATATTGACCTCTCTTaGAATAGTCGTACTGCCTTCAATGAAGCAGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: QTRVSRSDIDLS*NSRTAFNEADA Trigger: AGCATCTGCTTCATTGAAGGCAGTACGACTATTTCAAGAGAGGTCAATATCAGATCTGGAGACCCTTGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR GCA 72 bp | CCTCAATCTGCCTCTCAAGTTGGGATTACAGGTATGTaGCACCATGGCCTGGCTATATTTTCTATTTATATT | + |
|
Preference number: 3 (lower is better) Translates to: PQSASQVGITGM*HHGLAIFSIYI Trigger: AATATAAATAGAAAATATAGCCAGGCCATGGTGGCACATACCTGTAATCCCAACTTGAGAGGCAGATTGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTGTAGCCTGGGCTAATTTCAAACTCACTATAATCCTTCTGCCTCAATCTGCCTCTCCAGATCTGATATaGACCTCTCTTGAAATAGTC | + |
|
Preference number: 3 (lower is better) Translates to: FVAWANFKLTIILLPQSASPDLI*TSLEIV Trigger: GACTATTTCAAGAGAGGTCAATATCAGATCTGGAGA...GGCAGATTGAGGCAGAAGGATTATAGTGAGTTTGAAATTAGCCCAGGCTACAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGTATTTTATACAAACCTAGATGGAATAGAGGAGGGCTTGCTCTGGCGAGTAACAAACAATTCCCATTaGTTCCTCTACCTACAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: NVFYTNLDGIEEGLLWRVTNNSH*FLYLQA Trigger: TGCTTGTAGGTAGAGGAACAAATGGGAATTGTTTGT...TACTCGCCAGAGCAAGCCCTCCTCTATTCCATCTAGGTTTGTATAAAATACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTACCCACAAGTTTGCAGGTTTATCACTTCCTTTCAAATTCTCTAATGATCGTGGTCATCATGCTGTaGAGGACACATTTTTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: PLPTSLQVYHFLSNSLMIVVIML*RTHFCH Trigger: GTGACAAAAATGTGTCCTCAACAGCATGATGACCAC...GATCATTAGAGAATTTGAAAGGAAGTGATAAACCTGCAAACTTGTGGGTAAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTTGTCTACATCCTGTCTCCTTCCTTATACTGACTAATCAACAAAGCATCTTTGTGGTCATCATGCTGTaGAGGACACATTTTTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: CCLHPVSFLILTNQQSIFVVIML*RTHFCH Trigger: GTGACAAAAATGTGTCCTCAACAGCATGATGACCAC...AAAGATGCTTTGTTGATTAGTCAGTATAAGGAAGGAGACAGGATGTAGACAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR-3UTR CAA 90 bp | AACGATACACTATCTCAAGCCCTCCTCTCATCCCCTTTACCCAAGAAAGAAAATCCTAAACAAAGATGGTaGGTCTTAGAACAAAGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: NDTLSQALLSSPLPKKENPKQRW*VLEQSH Trigger: ATGACTTTGTTCTAAGACCAACCATCTTTGTTTAGG...ATTTTCTTTCTTGGGTAAAGGGGATGAGAGGAGGGCTTGAGATAGTGTATCGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTTGTACCTATCACAAGGTAACCTTAAGATTGAGATTTGTAAAATACGTCTGGCAGGCCACACAGCTATaGTTGGGAACAGTGGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: CCTYHKVTLRLRFVKYVWQATQL*LGTVEK Trigger: TTTTTCCACTGTTCCCAACAATAGCTGTGTGGCCTG...CCAGACGTATTTTACAAATCTCAATCTTAAGGTTACCTTGTGATAGGTACAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGACTGTGTTGCCAGGTAATTTTATCACTGTGCAAAGACCACAAAATGTATTTACAAACAATTCCCATTaGTTCCTCTACCTACAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: VTVLPGNFITVQRPQNVFTNNSH*FLYLQA Trigger: TGCTTGTAGGTAGAGGAACAAATGGGAATTGTTTGT...AAATACATTTTGTGGTCTTTGCACAGTGATAAAATTACCTGGCAACACAGTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGCTACTGTTGTACCTATCACAAGGTAACCTTAAGATTGAGATTTGTAAAATACCTAAACAAAGATGGTaGGTCTTAGAACAAAGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: GLLLYLSQGNLKIEICKIPKQRW*VLEQSH Trigger: ATGACTTTGTTCTAAGACCAACCATCTTTGTTTAGG...TATTTTACAAATCTCAATCTTAAGGTTACCTTGTGATAGGTACAACAGTAGCCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| 3UTR TCA 72 bp | GTCCTATTTGAATTTCTGATATGGTACATACTGACATaGCCATGTAAACAGGTTCTTAGGCATCAATGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VLFEFLIWYILT*PCKQVLRHQWF Trigger: AAACCATTGATGCCTAAGAACCTGTTTACATGGTCATGTCAGTATGTACCATATCAGAAATTCAAATAGGAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| CDS-3UTR CCA 90 bp | AAGCATCAAGCTGACCCTGCTCGGCTGCCTGCCTGCCCATGCATTACCTCAATGGCAGCAGAGGGTCGGTaGGCAGCGACTCCAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KHQADPARLPACPCITSMAAEGR*AATPGS Trigger: TGACCCTGGAGTCGCTGCCCACCGACCCTCTGCTGC...CATTGAGGTAATGCATGGGCAGGCAGGCAGCCGAGCAGGGTCAGCTTGATGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTCAGCTCTGAATGGACCAGCTATACTCAGGCTGTAAGCCAGCAAGCACCAGCAGCAGAGGGTCGGTaGGCAGCGACTCCAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AVSSEWTSYTQAVSQQAPAAEGR*AATPGS Trigger: TGACCCTGGAGTCGCTGCCCACCGACCCTCTGCTGC...TGGTGCTTGCTGGCTTACAGCCTGAGTATAGCTGGTCCATTCAGAGCTGACTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| CDS-3UTR CCA 90 bp | AAACATGCAGCTGCCTTGAGTTTCCCAGGAACCCCAATGCTTGTGAGTCCTCCCGCAGCAGAGGGTCGGTaGGCAGCGACTCCAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KHAAALSFPGTPMLVSPPAAEGR*AATPGS Trigger: TGACCCTGGAGTCGCTGCCCACCGACCCTCTGCTGC...GGGAGGACTCACAAGCATTGGGGTTCCTGGGAAACTCAAGGCAGCTGCATGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| CDS-3UTR CCA 90 bp | CGTAGAATAATTCTACGTAACGATACACTATCTCAAGCCCTCCTCTCATCCCCTGCAGCAGAGGGTCGGTaGGCAGCGACTCCAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RRIILRNDTLSQALLSSPAAEGR*AATPGS Trigger: TGACCCTGGAGTCGCTGCCCACCGACCCTCTGCTGC...AGGGGATGAGAGGAGGGCTTGAGATAGTGTATCGTTACGTAGAATTATTCTACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| CDS-3UTR CCA 90 bp | AAGCATCAAGCTGACCCTGCTCGGCTGCCTGCCTGCCCATGCATTACCTCAATGCCGAGCCATTTGGTCTaGACATTGGTAGAACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KHQADPARLPACPCITSMPSHLV*TLVEHF Trigger: GAAGTGTTCTACCAATGTCCAGACCAAATGGCTCGG...CATTGAGGTAATGCATGGGCAGGCAGGCAGCCGAGCAGGGTCAGCTTGATGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| CDS-3UTR CCA 90 bp | AACCTAGATGGAATAGAGGAGGGCTTGCTCTGGCGAGTAACCGCTCTCCACACCCACAGAGCTGAGTTCTaGCAGAAACGATGTGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: NLDGIEEGLLWRVTALHTHRAEF*QKRCGH Trigger: GTGTCCACATCGTTTCTGCCAGAACTCAGCTCTGTG...GGTGTGGAGAGCGGTTACTCGCCAGAGCAAGCCCTCCTCTATTCCATCTAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| CDS-3UTR CCA 90 bp | CCCACTCCAGGAGCTGGGAGGGCGTCTTCTAAGCATTCAATGTCTACAACTCAGACTACTCCAGGTCCCTaGACTTCTTCCACATCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PTPGAGRASSKHSMSTTQTTPGP*TSSTSP Trigger: AGGGGATGTGGAAGAAGTCCAGGGACCTGGAGTAGT...CTGAGTTGTAGACATTGAATGCTTAGAAGACGCCCTCCCAGCTCCTGGAGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| CDS-3UTR TCA 90 bp | AACCTAGATGGAATAGAGGAGGGCTTGCTCTGGCGAGTAACCGCTCTCCACACCCAGTGGATCATGAGTTaGAAGCTGGCTAAGTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: NLDGIEEGLLWRVTALHTQWIMS*KLAKSS Trigger: CGAAGACTTAGCCAGCTTTCAACTCATGATCCACTG...GGTGTGGAGAGCGGTTACTCGCCAGAGCAAGCCCTCCTCTATTCCATCTAGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| CDS-3UTR CCA 90 bp | CGCTCATATAGGTTCTGGGCTAACCAAGAATGGAAGTCTGGTCTGGTGTTGGCCACTACTCCAGGTCCCTaGACTTCTTCCACATCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSYRFWANQEWKSGLVLATTPGP*TSSTSP Trigger: AGGGGATGTGGAAGAAGTCCAGGGACCTGGAGTAGT...GGCCAACACCAGACCAGACTTCCATTCTTGGTTAGCCCAGAACCTATATGAGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| CDS-3UTR CCA 90 bp | CCCACTCCAGGAGCTGGGAGGGCGTCTTCTAAGCATTCAATGTCTACAACTCAGCCGAGCCATTTGGTCTaGACATTGGTAGAACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: PTPGAGRASSKHSMSTTQPSHLV*TLVEHF Trigger: GAAGTGTTCTACCAATGTCCAGACCAAATGGCTCGG...CTGAGTTGTAGACATTGAATGCTTAGAAGACGCCCTCCCAGCTCCTGGAGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| CDS-3UTR CCA 90 bp | CCCACTCCAGGAGCTGGGAGGGCGTCTTCTAAGCATTCAATGTCTACAACTCAGTGTGAAGAAATAGTGTaGCGGATGCACAGAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PTPGAGRASSKHSMSTTQCEEIV*RMHRAE Trigger: CTCAGCTCTGTGCATCCGCCACACTATTTCTTCACA...CTGAGTTGTAGACATTGAATGCTTAGAAGACGCCCTCCCAGCTCCTGGAGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| CDS-3UTR TCA 90 bp | TGTTGGCCAAGAATGGAAGTCTGGTCTGGTGTAGGCATGGTGCACACATCTAGCCAGTGGATCATGAGTTaGAAGCTGGCTAAGTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: CWPRMEVWSGVGMVHTSSQWIMS*KLAKSS Trigger: CGAAGACTTAGCCAGCTTTCAACTCATGATCCACTG...GCTAGATGTGTGCACCATGCCTACACCAGACCAGACTTCCATTCTTGGCCAACA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| CDS-3UTR TCA 90 bp | CCCACTCCAGGAGCTGGGAGGGCGTCTTCTAAGCATTCAATGTCTACAACTCAGCCCTTCCATGTAGCCTaGTGTTGTAGAAAATGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PTPGAGRASSKHSMSTTQPFHVA*CCRKCG Trigger: ACCACATTTTCTACAACATCAGGCTACATGGAAGGG...CTGAGTTGTAGACATTGAATGCTTAGAAGACGCCCTCCCAGCTCCTGGAGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| CDS-3UTR CCA 90 bp | CGCTCATATAGGTTCTGGGCTAACCAAGAATGGAAGTCTGGTCTGGTGTTGGCCTGTGAAGAAATAGTGTaGCGGATGCACAGAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSYRFWANQEWKSGLVLACEEIV*RMHRAE Trigger: CTCAGCTCTGTGCATCCGCCACACTATTTCTTCACA...GGCCAACACCAGACCAGACTTCCATTCTTGGTTAGCCCAGAACCTATATGAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| 3UTR CAA 72 bp | TTCTGGGCTAACCAAGAATGGAAGTCTGGTCTGGTGTaGGCCAAGAATGGAAGTCTGGTCTGGTGTAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FWANQEWKSGLV*AKNGSLVWCRH Trigger: ATGCCTACACCAGACCAGACTTCCATTCTTGGCCAACACCAGACCAGACTTCCATTCTTGGTTAGCCCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| CDS-3UTR TCA 90 bp | CGCTCATATAGGTTCTGGGCTAACCAAGAATGGAAGTCTGGTCTGGTGTTGGCCCCCTTCCATGTAGCCTaGTGTTGTAGAAAATGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSYRFWANQEWKSGLVLAPFHVA*CCRKCG Trigger: ACCACATTTTCTACAACATCAGGCTACATGGAAGGG...GGCCAACACCAGACCAGACTTCCATTCTTGGTTAGCCCAGAACCTATATGAGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| 3UTR CAA 72 bp | GTGAGTCCTCCCCCAGGCTGCTATGTTGTTCCTCAGTaGCAGCTGTCAATCATCCATGTTCCTGTTAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: VSPPPGCYVVPQ*QLSIIHVPVSN Trigger: ATTACTAACAGGAACATGGATGATTGACAGCTGCAACTGAGGAACAACATAGCAGCCTGGGGGAGGACTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| CDS-3UTR TCA 90 bp | AAGATGAGGCTGCCGCGGGCTTCTGTTGAAACACCATGCGATTGTACTCTTTTACAGTGGATCATGAGTTaGAAGCTGGCTAAGTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: KMRLPRASVETPCDCTLLQWIMS*KLAKSS Trigger: CGAAGACTTAGCCAGCTTTCAACTCATGATCCACTG...TAAAAGAGTACAATCGCATGGTGTTTCAACAGAAGCCCGCGGCAGCCTCATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| CDS-3UTR TCA 90 bp | AAACATGCAGCTGCCTTGAGTTTCCCAGGAACCCCAATGCTTGTGAGTCCTCCCAAACGATGTGGACACTaGAACTGTAATATCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KHAAALSFPGTPMLVSPPKRCGH*NCNISS Trigger: ACTGGAGATATTACAGTTTCAGTGTCCACATCGTTT...GGGAGGACTCACAAGCATTGGGGTTCCTGGGAAACTCAAGGCAGCTGCATGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| CDS-3UTR CCA 90 bp | AAGATGAGGCTGCCGCGGGCTTCTGTTGAAACACCATGCGATTGTACTCTTTTACCGAGCCATTTGGTCTaGACATTGGTAGAACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KMRLPRASVETPCDCTLLPSHLV*TLVEHF Trigger: GAAGTGTTCTACCAATGTCCAGACCAAATGGCTCGG...TAAAAGAGTACAATCGCATGGTGTTTCAACAGAAGCCCGCGGCAGCCTCATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| CDS-3UTR CCA 90 bp | AAGCATCAAGCTGACCCTGCTCGGCTGCCTGCCTGCCCATGCATTACCTCAATGTGTTGCCACACATTCTaGATCATGAATATATCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KHQADPARLPACPCITSMCCHTF*IMNISE Trigger: TTCAGATATATTCATGATCCAGAATGTGTGGCAACA...CATTGAGGTAATGCATGGGCAGGCAGGCAGCCGAGCAGGGTCAGCTTGATGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| CDS-3UTR TCA 90 bp | TGTTGGCCAAGAATGGAAGTCTGGTCTGGTGTAGGCATGGTGCACACATCTAGCAAACGATGTGGACACTaGAACTGTAATATCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CWPRMEVWSGVGMVHTSSKRCGH*NCNISS Trigger: ACTGGAGATATTACAGTTTCAGTGTCCACATCGTTT...GCTAGATGTGTGCACCATGCCTACACCAGACCAGACTTCCATTCTTGGCCAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| CDS-3UTR CCA 90 bp | CGTAGAATAATTCTACGTAACGATACACTATCTCAAGCCCTCCTCTCATCCCCTCACAGAGCTGAGTTCTaGCAGAAACGATGTGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: RRIILRNDTLSQALLSSPHRAEF*QKRCGH Trigger: GTGTCCACATCGTTTCTGCCAGAACTCAGCTCTGTG...AGGGGATGAGAGGAGGGCTTGAGATAGTGTATCGTTACGTAGAATTATTCTACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| 3UTR CAA 72 bp | GTATTTTATACAAACCTAGATGGAATAGAGGAGGGCTaGCTCTGGCGAGTAACCGCTCTCCACACCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: VFYTNLDGIEEG*LWRVTALHTHF Trigger: AAAGTGGGTGTGGAGAGCGGTTACTCGCCAGAGCAAGCCCTCCTCTATTCCATCTAGGTTTGTATAAAATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| CDS-3UTR TCA 90 bp | CGTAGAATAATTCTACGTAACGATACACTATCTCAAGCCCTCCTCTCATCCCCTCAGTGGATCATGAGTTaGAAGCTGGCTAAGTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: RRIILRNDTLSQALLSSPQWIMS*KLAKSS Trigger: CGAAGACTTAGCCAGCTTTCAACTCATGATCCACTG...AGGGGATGAGAGGAGGGCTTGAGATAGTGTATCGTTACGTAGAATTATTCTACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTCAGCTCTGAATGGACCAGCTATACTCAGGCTGTAAGCCAGCAAGCACCATGTTGCCACACATTCTaGATCATGAATATATCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: AVSSEWTSYTQAVSQQAPCCHTF*IMNISE Trigger: TTCAGATATATTCATGATCCAGAATGTGTGGCAACA...TGGTGCTTGCTGGCTTACAGCCTGAGTATAGCTGGTCCATTCAGAGCTGACTGC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| CDS-3UTR CCA 90 bp | AACGATACACTATCTCAAGCCCTCCTCTCATCCCCTTTACCCAAGAAAGAAAATCACAGAGCTGAGTTCTaGCAGAAACGATGTGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: NDTLSQALLSSPLPKKENHRAEF*QKRCGH Trigger: GTGTCCACATCGTTTCTGCCAGAACTCAGCTCTGTG...ATTTTCTTTCTTGGGTAAAGGGGATGAGAGGAGGGCTTGAGATAGTGTATCGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| 3UTR CAA 72 bp | TTTGGCAGTGGTCATCATGCTGTTGAGGACACATTTTaGTCACGTCAGGTGATTACAAACAAGGGTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FGSGHHAVEDTF*SRQVITNKGLQ Trigger: CTGGAGACCCTTGTTTGTAATCACCTGACGTGACAAAAATGTGTCCTCAACAGCATGATGACCACTGCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR CAA 72 bp | GATGAGAATGGGTCCTCTTCCAGGAAGGTTACTGGCTaGTCCACTTTTCTAGAATTACCTCAAACCTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: DENGSSSRKVTG*STFLELPQTYP Trigger: TGGGTAGGTTTGAGGTAATTCTAGAAAAGTGGACAAGCCAGTAACCTTCCTGGAAGAGGACCCATTCTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| CDS-3UTR GCA 90 bp | CGTAGAATAATTCTACGTAACGATACACTATCTCAAGCCCTCCTCTCATCCCCTTCAAGCCGGTGTGTATaGAAAAGGTTAAAGGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RRIILRNDTLSQALLSSPSSRCV*KRLKGD Trigger: GTCTCCCTTTAACCTTTTGCATACACACCGGCTTGA...AGGGGATGAGAGGAGGGCTTGAGATAGTGTATCGTTACGTAGAATTATTCTACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
||
| 3UTR CAA 72 bp | TTGTTGGCCCACCAGGCTGAGCTTGGATGGATTTCTTaGGTCTGTTATTGTCCTCTGTCCCAGAAAATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLAHQAELGWIS*VCYCPLSQKIK Trigger: TTTTATTTTCTGGGACAGAGGACAATAACAGACCAAAGAAATCCATCCAAGCTCAGCCTGGTGGGCCAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| CDS-3UTR TCA 90 bp | AATGACAAGGAAGTGTGGGGCCAGCTTTGTCATGGTTTCTTAATTGCTACTTTACTCCACAGTGGATCATaGGTTGAAAGCTGGCTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NDKEVWGQLCHGFLIATLLHSGS*VESWLS Trigger: ACTTAGCCAGCTTTCAACTCATGATCCACTGTGGAG...TAAAGTAGCAATTAAGAAACCATGACAAAGCTGGCCCCACACTTCCTTGTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| CDS-3UTR TCA 90 bp | TTTGTAGCCTGGGCTAATTTCAAACTCACTATAATCCTTCTGCCTCAATCTGCCCCCTTCCATGTAGCCTaGTGTTGTAGAAAATGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FVAWANFKLTIILLPQSAPFHVA*CCRKCG Trigger: ACCACATTTTCTACAACATCAGGCTACATGGAAGGG...GGCAGATTGAGGCAGAAGGATTATAGTGAGTTTGAAATTAGCCCAGGCTACAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028603.10 |
||
| CDS-3UTR CCA 90 bp | AATGTATTTTATACAAACCTAGATGGAATAGAGGAGGGCTTGCTCTGGCGAGTACCGAGCCATTTGGTCTaGACATTGGTAGAACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: NVFYTNLDGIEEGLLWRVPSHLV*TLVEHF Trigger: GAAGTGTTCTACCAATGTCCAGACCAAATGGCTCGG...TACTCGCCAGAGCAAGCCCTCCTCTATTCCATCTAGGTTTGTATAAAATACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| CDS-3UTR CCA 90 bp | TGTTGTCTACATCCTGTCTCCTTCCTTATACTGACTAATCAACAAAGCATCTTTACTACTCCAGGTCCCTaGACTTCTTCCACATCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CCLHPVSFLILTNQQSIFTTPGP*TSSTSP Trigger: AGGGGATGTGGAAGAAGTCCAGGGACCTGGAGTAGT...AAAGATGCTTTGTTGATTAGTCAGTATAAGGAAGGAGACAGGATGTAGACAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR CAA 72 bp | ATCATCCATGTTCCTGTTAGTAATCCTGATAATTTGTaGGCCCACCAGGCTGAGCTTGGATGGATTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: IIHVPVSNPDNL*AHQAELGWISL Trigger: CAAAGAAATCCATCCAAGCTCAGCCTGGTGGGCCAACAAATTATCAGGATTACTAACAGGAACATGGATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR CAA 72 bp | TCAATCATCCATGTTCCTGTTAGTAATCCTGATAATTaGTTGGCCCACCAGGCTGAGCTTGGATGGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SIIHVPVSNPDN*LAHQAELGWIS Trigger: AGAAATCCATCCAAGCTCAGCCTGGTGGGCCAACAAATTATCAGGATTACTAACAGGAACATGGATGATTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| 3UTR CAA 72 bp | AACACCTCTCCCAGTGGTTATATAAGCAGTGCAAACTaGCTAGAAGAGATTCTTCAAACATGCAGCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NTSPSGYISSAN*LEEILQTCSCL Trigger: AAGGCAGCTGCATGTTTGAAGAATCTCTTCTAGCAAGTTTGCACTGCTTATATAACCACTGGGAGAGGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| CDS-3UTR CCA 90 bp | TGTTGTCTACATCCTGTCTCCTTCCTTATACTGACTAATCAACAAAGCATCTTTCAGAGCGGTAGTGATTaGACAGTGCCATACTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CCLHPVSFLILTNQQSIFQSGSD*TVPYFP Trigger: TGGGAAGTATGGCACTGTCCAATCACTACCGCTCTG...AAAGATGCTTTGTTGATTAGTCAGTATAAGGAAGGAGACAGGATGTAGACAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| CDS-3UTR CCA 90 bp | TGTGAGAACGGTCATAGCGTAAGAACTTTAACTTTTAAAGCCCAAAGTTATGTTACTACTCCAGGTCCCTaGACTTCTTCCACATCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CENGHSVRTLTFKAQSYVTTPGP*TSSTSP Trigger: AGGGGATGTGGAAGAAGTCCAGGGACCTGGAGTAGT...AACATAACTTTGGGCTTTAAAAGTTAAAGTTCTTACGCTATGACCGTTCTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| CDS-3UTR CCA 90 bp | AAGATGAGGCTGCCGCGGGCTTCTGTTGAAACACCATGCGATTGTACTCTTTTATTCATATATCCGACCTaGGCTAATAATTGGAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: KMRLPRASVETPCDCTLLFIYPT*ANNWKF Trigger: GAATTTCCAATTATTAGCCCAGGTCGGATATATGAA...TAAAAGAGTACAATCGCATGGTGTTTCAACAGAAGCCCGCGGCAGCCTCATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028603.10 |
||
| 3UTR CAA 72 bp | TCAGGTGATTACAAACAAGGGTCTCCAGATCTGATATaGACCTCTCTTGAAATAGTCGTACTGCCTTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: SGDYKQGSPDLI*TSLEIVVLPSM Trigger: CATTGAAGGCAGTACGACTATTTCAAGAGAGGTCAATATCAGATCTGGAGACCCTTGTTTGTAATCACCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTACCCACAAGTTTGCAGGTTTATCACTTCCTTTCAAATTCTCTAATGATCTGTGAAGAAATAGTGTaGCGGATGCACAGAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLPTSLQVYHFLSNSLMICEEIV*RMHRAE Trigger: CTCAGCTCTGTGCATCCGCCACACTATTTCTTCACA...GATCATTAGAGAATTTGAAAGGAAGTGATAAACCTGCAAACTTGTGGGTAAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
||
| CDS-3UTR TCA 90 bp | AATGACAAGGAAGTGTGGGGCCAGCTTTGTCATGGTTTCTTAATTGCTACTTTAAAACGATGTGGACACTaGAACTGTAATATCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NDKEVWGQLCHGFLIATLKRCGH*NCNISS Trigger: ACTGGAGATATTACAGTTTCAGTGTCCACATCGTTT...TAAAGTAGCAATTAAGAAACCATGACAAAGCTGGCCCCACACTTCCTTGTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| CDS-3UTR GCA 90 bp | TGTTGTCTACATCCTGTCTCCTTCCTTATACTGACTAATCAACAAAGCATCTTTTCAAGCCGGTGTGTATaGAAAAGGTTAAAGGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: CCLHPVSFLILTNQQSIFSSRCV*KRLKGD Trigger: GTCTCCCTTTAACCTTTTGCATACACACCGGCTTGA...AAAGATGCTTTGTTGATTAGTCAGTATAAGGAAGGAGACAGGATGTAGACAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| CDS-3UTR CCA 90 bp | TGTGAGAACGGTCATAGCGTAAGAACTTTAACTTTTAAAGCCCAAAGTTATGTTTGTGAAGAAATAGTGTaGCGGATGCACAGAGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: CENGHSVRTLTFKAQSYVCEEIV*RMHRAE Trigger: CTCAGCTCTGTGCATCCGCCACACTATTTCTTCACA...AACATAACTTTGGGCTTTAAAAGTTAAAGTTCTTACGCTATGACCGTTCTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| CDS-3UTR GCA 90 bp | TGTTGTACCTATCACAAGGTAACCTTAAGATTGAGATTTGTAAAATACGTCTGGTCAAGCCGGTGTGTATaGAAAAGGTTAAAGGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: CCTYHKVTLRLRFVKYVWSSRCV*KRLKGD Trigger: GTCTCCCTTTAACCTTTTGCATACACACCGGCTTGA...CCAGACGTATTTTACAAATCTCAATCTTAAGGTTACCTTGTGATAGGTACAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| CDS-3UTR GCA 90 bp | TGTGAGAACGGTCATAGCGTAAGAACTTTAACTTTTAAAGCCCAAAGTTATGTTTCAAGCCGGTGTGTATaGAAAAGGTTAAAGGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: CENGHSVRTLTFKAQSYVSSRCV*KRLKGD Trigger: GTCTCCCTTTAACCTTTTGCATACACACCGGCTTGA...AACATAACTTTGGGCTTTAAAAGTTAAAGTTCTTACGCTATGACCGTTCTCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| CDS-3UTR CCA 90 bp | AACGATACACTATCTCAAGCCCTCCTCTCATCCCCTTTACCCAAGAAAGAAAATTGTTGCCACACATTCTaGATCATGAATATATCTGAA | + |
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Preference number: 4 (lower is better) Translates to: NDTLSQALLSSPLPKKENCCHTF*IMNISE Trigger: TTCAGATATATTCATGATCCAGAATGTGTGGCAACA...ATTTTCTTTCTTGGGTAAAGGGGATGAGAGGAGGGCTTGAGATAGTGTATCGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| 3UTR CAA 72 bp | TCCAACCATTTTACAGCCCACAAATTAGGGCTACTGTaGTACCTATCACAAGGTAACCTTAAGATTGAGATT | + |
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Preference number: 4 (lower is better) Translates to: SNHFTAHKLGLL*YLSQGNLKIEI Trigger: AATCTCAATCTTAAGGTTACCTTGTGATAGGTACAACAGTAGCCCTAATTTGTGGGCTGTAAAATGGTTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| 3UTR CAA 72 bp | GATGACTTGGCAAACATTGTCAAACAATCAGTCAGCTaGGCCTGTCATAGAATAAATTCTCACATGGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: DDLANIVKQSVS*ACHRINSHMVE Trigger: TTCTACCATGTGAGAATTTATTCTATGACAGGCCAAGCTGACTGATTGTTTGACAATGTTTGCCAAGTCATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| CDS-3UTR GCA 90 bp | TGTTGTCTACATCCTGTCTCCTTCCTTATACTGACTAATCAACAAAGCATCTTTAATATCTCCAGTTGTTaGCACACATTCTGGATCATG | + |
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Preference number: 4 (lower is better) Translates to: CCLHPVSFLILTNQQSIFNISSC*HTFWIM Trigger: CATGATCCAGAATGTGTGGCAACAACTGGAGATATT...AAAGATGCTTTGTTGATTAGTCAGTATAAGGAAGGAGACAGGATGTAGACAACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| CDS-3UTR GCA 90 bp | TGTTGTCTACATCCTGTCTCCTTCCTTATACTGACTAATCAACAAAGCATCTTTGGATTCATCCATGTCTaGAGAGTCATCATTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: CCLHPVSFLILTNQQSIFGFIHV*RVIIFF Trigger: GAAGAAAATGATGACTCTGCAGACATGGATGAATCC...AAAGATGCTTTGTTGATTAGTCAGTATAAGGAAGGAGACAGGATGTAGACAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028603.10 |
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| CDS-3UTR CCA 90 bp | GTGACTGTGTTGCCAGGTAATTTTATCACTGTGCAAAGACCACAAAATGTATTTTCAGGACCCATTTCCTaGGCTAATAATTGGAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: VTVLPGNFITVQRPQNVFSGPIS*ANNWKF Trigger: GAATTTCCAATTATTAGCCCAGGAAATGGGTCCTGA...AAATACATTTTGTGGTCTTTGCACAGTGATAAAATTACCTGGCAACACAGTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111136.8 |
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| CDS-3UTR TCA 90 bp | GGGCTACTGTTGTACCTATCACAAGGTAACCTTAAGATTGAGATTTGTAAAATAAAACGATGTGGACACTaGAACTGTAATATCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLLLYLSQGNLKIEICKIKRCGH*NCNISS Trigger: ACTGGAGATATTACAGTTTCAGTGTCCACATCGTTT...TATTTTACAAATCTCAATCTTAAGGTTACCTTGTGATAGGTACAACAGTAGCCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| CDS-3UTR CCA 90 bp | TGTGAGAACGGTCATAGCGTAAGAACTTTAACTTTTAAAGCCCAAAGTTATGTTTGTTGCCACACATTCTaGATCATGAATATATCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CENGHSVRTLTFKAQSYVCCHTF*IMNISE Trigger: TTCAGATATATTCATGATCCAGAATGTGTGGCAACA...AACATAACTTTGGGCTTTAAAAGTTAAAGTTCTTACGCTATGACCGTTCTCACA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| CDS-3UTR CCA 90 bp | GGGCTACTGTTGTACCTATCACAAGGTAACCTTAAGATTGAGATTTGTAAAATATTCATATATCCGACCTaGGCTAATAATTGGAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: GLLLYLSQGNLKIEICKIFIYPT*ANNWKF Trigger: GAATTTCCAATTATTAGCCCAGGTCGGATATATGAA...TATTTTACAAATCTCAATCTTAAGGTTACCTTGTGATAGGTACAACAGTAGCCC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| CDS-3UTR CCA 90 bp | TGTTGTACCTATCACAAGGTAACCTTAAGATTGAGATTTGTAAAATACGTCTGGTTCATATATCCGACCTaGGCTAATAATTGGAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: CCTYHKVTLRLRFVKYVWFIYPT*ANNWKF Trigger: GAATTTCCAATTATTAGCCCAGGTCGGATATATGAA...CCAGACGTATTTTACAAATCTCAATCTTAAGGTTACCTTGTGATAGGTACAACA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| CDS GCA 90 bp | GCCCGTTGTGGATCCGGTATGAACAGCGATAATCATCCGGGAGCTTaGAACCGATCTGAGCTTCGACAGCATCCAGGTCTTCCTCACGTG | + |
|
Preference number: 5 (lower is better) Translates to: ARCGSGMNSDNHPGA*NRSELRQHPGLPHV Trigger: CACGTGAGGAAGACCTGGATGCTGTCGAAGCTCAGATCGGTTGCAAGCTCCCGGATGATTATCGCTGTTCATACCGGATCCACAACGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028603.10 ENSMUST00000102565.4 ENSMUST00000111135.8 ENSMUST00000111136.8 |
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| CDS TCA 90 bp | CGGCGTAATGGTCGATGTACCTCCCCACGTCTGAGTAGGTCTCTATaGAGAGGGATCTCCAGCACTGACTCTTCCCGGCTTTTTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RRNGRCTSPRLSRSL*RGISSTDSSRLFLP Trigger: AGGAAGAAAAAGCCGGGAAGAGTCAGTGCTGGAGATCCCTCTTCATAGAGACCTACTCAGACGTGGGGAGGTACATCGACCATTACGCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028603.10 ENSMUST00000102565.4 ENSMUST00000111135.8 ENSMUST00000111136.8 |
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| CDS TCA 90 bp | GGCCTTTTTAATGGCGGCGTAATGGTCGATGTACCTCCCCACGTCTaGGTAGGTCTCTATGAAGAGGGATCTCCAGCACTGACTCTTCCC | + |
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Preference number: 5 (lower is better) Translates to: GLFNGGVMVDVPPHV*VGLYEEGSPALTLP Trigger: GGGAAGAGTCAGTGCTGGAGATCCCTCTTCATAGAGACCTACTCAGACGTGGGGAGGTACATCGACCATTACGCCGCCATTAAAAAGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028603.10 ENSMUST00000102565.4 ENSMUST00000111135.8 ENSMUST00000111136.8 |
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| CDS-3UTR CAA 90 bp | AAGCATCAAGCTGACCCTGCTCGGCTGCCTGCCTGCCCATGCATTACCTCAATGACTAACTTTTGCCCGTaGTGGATCCGGTATGAACAG | + |
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Preference number: 5 (lower is better) Translates to: KHQADPARLPACPCITSMTNFCP*WIRYEQ Trigger: CTGTTCATACCGGATCCACAACGGGCAAAAGTTAGT...CATTGAGGTAATGCATGGGCAGGCAGGCAGCCGAGCAGGGTCAGCTTGATGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| CDS-3UTR CAA 90 bp | AACCTAGATGGAATAGAGGAGGGCTTGCTCTGGCGAGTAACCGCTCTCCACACCACTAACTTTTGCCCGTaGTGGATCCGGTATGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: NLDGIEEGLLWRVTALHTTNFCP*WIRYEQ Trigger: CTGTTCATACCGGATCCACAACGGGCAAAAGTTAGT...GGTGTGGAGAGCGGTTACTCGCCAGAGCAAGCCCTCCTCTATTCCATCTAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| CDS GCA 90 bp | TTGGTCTGGACATTGGTAGAACACTTCGTTCTTATTCCGCCCCTCTaGAGCCTCCACAGCTATGTACTGACTCAAGCCGGTGTGTATGCA | + |
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Preference number: 5 (lower is better) Translates to: LVWTLVEHFVLIPPL*SLHSYVLTQAGVYA Trigger: TGCATACACACCGGCTTGAGTCAGTACATAGCTGTGGAGGCTGCAGAGGGGCGGAATAAGAACGAAGTGTTCTACCAATGTCCAGACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028603.10 ENSMUST00000102565.4 ENSMUST00000111135.8 ENSMUST00000111136.8 |
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| CDS GCA 90 bp | CCTCTGCAGCCTCCACAGCTATGTACTGACTCAAGCCGGTGTGTATaGAAAAGGTTAAAGGGAGACAGTATTTCAGTCCCTGTCTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: PLQPPQLCTDSSRCV*KRLKGDSISVPVSA Trigger: AGCAGAGACAGGGACTGAAATACTGTCTCCCTTTAACCTTTTGCATACACACCGGCTTGAGTCAGTACATAGCTGTGGAGGCTGCAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028603.10 ENSMUST00000102565.4 ENSMUST00000111135.8 ENSMUST00000111136.8 |
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| CDS-3UTR CAA 90 bp | CGCTCATATAGGTTCTGGGCTAACCAAGAATGGAAGTCTGGTCTGGTGTTGGCCACTAACTTTTGCCCGTaGTGGATCCGGTATGAACAG | + |
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Preference number: 5 (lower is better) Translates to: RSYRFWANQEWKSGLVLATNFCP*WIRYEQ Trigger: CTGTTCATACCGGATCCACAACGGGCAAAAGTTAGT...GGCCAACACCAGACCAGACTTCCATTCTTGGTTAGCCCAGAACCTATATGAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| CDS CCA 90 bp | CTGCAGCAGTATCAACATCTAGTAGATCTTCAGAGCGGTAGTGATTaGACAGTGCCATACTTCCCAGCAACCCCGGCACCACTAACTTTT | + |
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Preference number: 5 (lower is better) Translates to: LQQYQHLVDLQSGSD*TVPYFPATPAPLTF Trigger: AAAAGTTAGTGGTGCCGGGGTTGCTGGGAAGTATGGCACTGTCCAATCACTACCGCTCTGAAGATCTACTAGATGTTGATACTGCTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028603.10 ENSMUST00000102565.4 ENSMUST00000111135.8 ENSMUST00000111136.8 |
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| CDS-3UTR CAA 90 bp | TTCCCATTTGTTCCTCTACCTACAAGCACAAAGTCAAGCAAAGCGATCCAACGCACTAACTTTTGCCCGTaGTGGATCCGGTATGAACAG | + |
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Preference number: 5 (lower is better) Translates to: FPFVPLPTSTKSSKAIQRTNFCP*WIRYEQ Trigger: CTGTTCATACCGGATCCACAACGGGCAAAAGTTAGT...GCGTTGGATCGCTTTGCTTGACTTTGTGCTTGTAGGTAGAGGAACAAATGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| CDS-3UTR CAA 90 bp | CGCTCATATAGGTTCTGGGCTAACCAAGAATGGAAGTCTGGTCTGGTGTTGGCCAAAATGTGGTACAGCTaGTGTATTCATATATCCGAC | + |
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Preference number: 5 (lower is better) Translates to: RSYRFWANQEWKSGLVLAKMWYS*CIHISD Trigger: GTCGGATATATGAATACACAAGCTGTACCACATTTT...GGCCAACACCAGACCAGACTTCCATTCTTGGTTAGCCCAGAACCTATATGAGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| CDS-3UTR CAA 90 bp | AATGACAAGGAAGTGTGGGGCCAGCTTTGTCATGGTTTCTTAATTGCTACTTTACATTTGGTCTGGACATaGGTAGAACACTTCGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: NDKEVWGQLCHGFLIATLHLVWT*VEHFVL Trigger: AAGAACGAAGTGTTCTACCAATGTCCAGACCAAATG...TAAAGTAGCAATTAAGAAACCATGACAAAGCTGGCCCCACACTTCCTTGTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028603.10 ENSMUST00000111136.8 |
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| CDS-3UTR CAA 90 bp | CGTAGAATAATTCTACGTAACGATACACTATCTCAAGCCCTCCTCTCATCCCCTAAAATGTGGTACAGCTaGTGTATTCATATATCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: RRIILRNDTLSQALLSSPKMWYS*CIHISD Trigger: GTCGGATATATGAATACACAAGCTGTACCACATTTT...AGGGGATGAGAGGAGGGCTTGAGATAGTGTATCGTTACGTAGAATTATTCTACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| CDS-3UTR CAA 90 bp | GTGACTGTGTTGCCAGGTAATTTTATCACTGTGCAAAGACCACAAAATGTATTTAAAATGTGGTACAGCTaGTGTATTCATATATCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: VTVLPGNFITVQRPQNVFKMWYS*CIHISD Trigger: GTCGGATATATGAATACACAAGCTGTACCACATTTT...AAATACATTTTGTGGTCTTTGCACAGTGATAAAATTACCTGGCAACACAGTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028603.10 |
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| CDS TCA 72 bp | AATGGCGGCGTAATGGTCGATGTACCTCCCCACGTCTaGGTAGGTCTCTATGAAGAGGGATCTCCAGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: NGGVMVDVPPHV*VGLYEEGSPAL Trigger: CAGTGCTGGAGATCCCTCTTCATAGAGACCTACTCAGACGTGGGGAGGTACATCGACCATTACGCCGCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028603.10 ENSMUST00000102565.4 ENSMUST00000111135.8 ENSMUST00000111136.8 |
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| CDS GCA 72 bp | GGATCCGGTATGAACAGCGATAATCATCCGGGAGCTTaGAACCGATCTGAGCTTCGACAGCATCCAGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GSGMNSDNHPGA*NRSELRQHPGL Trigger: AAGACCTGGATGCTGTCGAAGCTCAGATCGGTTGCAAGCTCCCGGATGATTATCGCTGTTCATACCGGATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028603.10 ENSMUST00000102565.4 ENSMUST00000111135.8 ENSMUST00000111136.8 |
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| CDS GCA 72 bp | ACATTGGTAGAACACTTCGTTCTTATTCCGCCCCTCTaGAGCCTCCACAGCTATGTACTGACTCAAGCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: TLVEHFVLIPPL*SLHSYVLTQAG Trigger: ACCGGCTTGAGTCAGTACATAGCTGTGGAGGCTGCAGAGGGGCGGAATAAGAACGAAGTGTTCTACCAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028603.10 ENSMUST00000102565.4 ENSMUST00000111135.8 ENSMUST00000111136.8 |
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| CDS CCA 72 bp | TATCAACATCTAGTAGATCTTCAGAGCGGTAGTGATTaGACAGTGCCATACTTCCCAGCAACCCCGGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: YQHLVDLQSGSD*TVPYFPATPAP Trigger: TGGTGCCGGGGTTGCTGGGAAGTATGGCACTGTCCAATCACTACCGCTCTGAAGATCTACTAGATGTTGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028603.10 ENSMUST00000102565.4 ENSMUST00000111135.8 ENSMUST00000111136.8 |
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| CDS CAA 72 bp | AATAGCAGCAGGATTCCGAGCCATTTGGTCTGGACATaGGTAGAACACTTCGTTCTTATTCCGCCCCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: NSSRIPSHLVWT*VEHFVLIPPLC Trigger: GCAGAGGGGCGGAATAAGAACGAAGTGTTCTACCAATGTCCAGACCAAATGGCTCGGAATCCTGCTGCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028603.10 ENSMUST00000102565.4 ENSMUST00000111135.8 ENSMUST00000111136.8 |
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| CDS CCA 72 bp | CATGTCAATAGCAGCAGGATTCCGAGCCATTTGGTCTaGACATTGGTAGAACACTTCGTTCTTATTCCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: HVNSSRIPSHLV*TLVEHFVLIPP Trigger: GGGCGGAATAAGAACGAAGTGTTCTACCAATGTCCAGACCAAATGGCTCGGAATCCTGCTGCTATTGACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028603.10 ENSMUST00000102565.4 ENSMUST00000111135.8 ENSMUST00000111136.8 |
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| CDS GCA 72 bp | CCTCCACAGCTATGTACTGACTCAAGCCGGTGTGTATaGAAAAGGTTAAAGGGAGACAGTATTTCAGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PPQLCTDSSRCV*KRLKGDSISVP Trigger: AGGGACTGAAATACTGTCTCCCTTTAACCTTTTGCATACACACCGGCTTGAGTCAGTACATAGCTGTGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028603.10 ENSMUST00000102565.4 ENSMUST00000111135.8 ENSMUST00000111136.8 |
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| CDS CCA 72 bp | GCTTGTGTATTCATATATCCGACCTGGGCTAATAATTaGAAATTCACCGACTACTCCAGGTCCCTGGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: ACVFIYPTWANN*KFTDYSRSLDF Trigger: GAAGTCCAGGGACCTGGAGTAGTCGGTGAATTTCCAATTATTAGCCCAGGTCGGATATATGAATACACAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028603.10 ENSMUST00000102565.4 ENSMUST00000111135.8 |
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| CDS TCA 72 bp | TCTGAAAATCTGGTCTCTGATGATGGGGAAACCACCTaGTACAACATTGTTGACATAGGATGTAAACCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SENLVSDDGETT*YNIVDIGCKPV Trigger: GACTGGTTTACATCCTATGTCAACAATGTTGTATCAGGTGGTTTCCCCATCATCAGAGACCAGATTTTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028603.10 ENSMUST00000102565.4 ENSMUST00000111135.8 ENSMUST00000111136.8 |
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