Pregenerated sensors for FBXO28 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047539Ensembl transcript IDs: ENSMUST00000051431.10, ENSMUST00000192544.6, ENSMUST00000194213.2, ENSMUST00000195061.6
Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCCTTCCGTCGTTTCCGAGGGGACTCCTCACTCTGCCCAGACCCTaGGGAGGTCCCTACTGCACTTTCCATGACTTCCCGGAGCTTGCG | + |
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Preference number: 1 (lower is better) Translates to: CLPSFPRGLLTLPRP*GGPYCTFHDFPELA Trigger: CGCAAGCTCCGGGAAGTCATGGAAAGTGCAGTAGGGACCTCCTCAGGGTCTGGGCAGAGTGAGGAGTCCCCTCGGAAACGACGGAAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192544.6 |
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| 3UTR GCA 90 bp | CCCTACTGCACTTTCCATGACTTCCCGGAGCTTGCGTTCCAGCTCTaGCAGCCGTGCGTTCTGTTCGCCTATGATCTGGGTCTGCTCGAG | + |
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Preference number: 1 (lower is better) Translates to: PYCTFHDFPELAFQL*QPCVLFAYDLGLLE Trigger: CTCGAGCAGACCCAGATCATAGGCGAACAGAACGCACGGCTGGCAGAGCTGGAACGCAAGCTCCGGGAAGTCATGGAAAGTGCAGTAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
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| 3UTR GCA 90 bp | ATGGCTTCCGTTGCCTTCCGTCGTTTCCGAGGGGACTCCTCACTCTaGCCAGACCCTGAGGAGGTCCCTACTGCACTTTCCATGACTTCC | + |
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Preference number: 1 (lower is better) Translates to: MASVAFRRFRGDSSL*PDPEEVPTALSMTS Trigger: GGAAGTCATGGAAAGTGCAGTAGGGACCTCCTCAGGGTCTGGGCAGAGTGAGGAGTCCCCTCGGAAACGACGGAAGGCAACGGAAGCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192544.6 |
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| 3UTR GCA 90 bp | CGCCTGAGGACAGTCACGCCAGCGCCGTTGGTTCTGACCTGCTGCTaGAGTTTGGTAACCTCTTGTCTGGACGGGTTTTGCTTGGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: RLRTVTPAPLVLTCC*SLVTSCLDGFCLEK Trigger: CTTCTCCAAGCAAAACCCGTCCAGACAAGAGGTTACCAAACTGCAGCAGCAGGTCAGAACCAACGGCGCTGGCGTGACTGTCCTCAGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
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| 3UTR GCA 90 bp | TCACGCCTGAGGACAGTCACGCCAGCGCCGTTGGTTCTGACCTGCTaGTGCAGTTTGGTAACCTCTTGTCTGGACGGGTTTTGCTTGGAG | + |
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Preference number: 1 (lower is better) Translates to: SRLRTVTPAPLVLTC*CSLVTSCLDGFCLE Trigger: CTCCAAGCAAAACCCGTCCAGACAAGAGGTTACCAAACTGCAGCAGCAGGTCAGAACCAACGGCGCTGGCGTGACTGTCCTCAGGCGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
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| 3UTR GCA 90 bp | ATCTCACGCCTGAGGACAGTCACGCCAGCGCCGTTGGTTCTGACCTaGTGCTGCAGTTTGGTAACCTCTTGTCTGGACGGGTTTTGCTTG | + |
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Preference number: 1 (lower is better) Translates to: ISRLRTVTPAPLVLT*CCSLVTSCLDGFCL Trigger: CAAGCAAAACCCGTCCAGACAAGAGGTTACCAAACTGCAGCAGCAGGTCAGAACCAACGGCGCTGGCGTGACTGTCCTCAGGCGTGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
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| 3UTR GCA 90 bp | ACTTTCCATGACTTCCCGGAGCTTGCGTTCCAGCTCTGCCAGCCGTaGGTTCTGTTCGCCTATGATCTGGGTCTGCTCGAGCAGTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: TFHDFPELAFQLCQP*VLFAYDLGLLEQFL Trigger: CAGAAACTGCTCGAGCAGACCCAGATCATAGGCGAACAGAACGCACGGCTGGCAGAGCTGGAACGCAAGCTCCGGGAAGTCATGGAAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
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| 3UTR GCA 90 bp | AGGGCCTGTTCTCCTCCCCTCCTGTCCATTCTTTTCATGTGTGTATaGCGCCTGTGTGTGGTGTGGACTGTGGGCAAACTTAGGCATGGG | + |
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Preference number: 1 (lower is better) Translates to: RACSPPLLSILFMCV*RLCVVWTVGKLRHG Trigger: CCCATGCCTAAGTTTGCCCACAGTCCACACCACACACAGGCGGCATACACACATGAAAAGAATGGACAGGAGGGGAGGAGAACAGGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| 3UTR GCA 90 bp | AGTTTGGTAACCTCTTGTCTGGACGGGTTTTGCTTGGAGAAGAGCTaGATTGTTGTCAGGGCTGCGGATGGCCCGGGAACTGGAGGAGAG | + |
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Preference number: 1 (lower is better) Translates to: SLVTSCLDGFCLEKS*IVVRAADGPGTGGE Trigger: CTCTCCTCCAGTTCCCGGGCCATCCGCAGCCCTGACAACAATGCAGCTCTTCTCCAAGCAAAACCCGTCCAGACAAGAGGTTACCAAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
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| 3UTR GCA 90 bp | ATTCCGAAGTCGTTTGGATTTCCTAAGAGAGTCTATGGCTTCCGTTaGCTTCCGTCGTTTCCGAGGGGACTCCTCACTCTGCCCAGACCC | + |
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Preference number: 1 (lower is better) Translates to: IPKSFGFPKRVYGFR*LPSFPRGLLTLPRP Trigger: GGGTCTGGGCAGAGTGAGGAGTCCCCTCGGAAACGACGGAAGGCAACGGAAGCCATAGACTCTCTTAGGAAATCCAAACGACTTCGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192544.6 |
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| 3UTR GCA 90 bp | AAGCCTAAGGACACCATGTTGCTCCGATATCCTGACAGGAGTAACTaGTTAAACTCTCAGCCACGGACGTCGTCCTCTGGAGCTAGAGCC | + |
|
Preference number: 1 (lower is better) Translates to: KPKDTMLLRYPDRSN*LNSQPRTSSSGARA Trigger: GGCTCTAGCTCCAGAGGACGACGTCCGTGGCTGAGAGTTTAAGCAGTTACTCCTGTCAGGATATCGGAGCAACATGGTGTCCTTAGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051431.10 ENSMUST00000192544.6 |
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| 3UTR GCA 90 bp | ACACCAGTGCAGGAGTGGTATGAAGTGCGCTGCCTAGGCAATGCATaGATCCATCCATGCAAATGGAGGACACGGCCCCAAAGAAAACTG | + |
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Preference number: 1 (lower is better) Translates to: TPVQEWYEVRCLGNA*IHPCKWRTRPQRKL Trigger: CAGTTTTCTTTGGGGCCGTGTCCTCCATTTGCATGGATGGATGCATGCATTGCCTAGGCAGCGCACTTCATACCACTCCTGCACTGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| 3UTR GCA 90 bp | AGAGGTTCAAGATCAACACCAGTGCAGGAGTGGTATGAAGTGCGCTaGCTAGGCAATGCATGCATCCATCCATGCAAATGGAGGACACGG | + |
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Preference number: 1 (lower is better) Translates to: RGSRSTPVQEWYEVR*LGNACIHPCKWRTR Trigger: CCGTGTCCTCCATTTGCATGGATGGATGCATGCATTGCCTAGGCAGCGCACTTCATACCACTCCTGCACTGGTGTTGATCTTGAACCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| 3UTR GCA 90 bp | GAGTGGTATGAAGTGCGCTGCCTAGGCAATGCATGCATCCATCCATaGAAATGGAGGACACGGCCCCAAAGAAAACTGAAAGCATGTACC | + |
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Preference number: 1 (lower is better) Translates to: EWYEVRCLGNACIHP*KWRTRPQRKLKACT Trigger: GGTACATGCTTTCAGTTTTCTTTGGGGCCGTGTCCTCCATTTGCATGGATGGATGCATGCATTGCCTAGGCAGCGCACTTCATACCACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| 3UTR TCA 90 bp | AAGCGCAAAGGATGCCAACCACAAGAGCCAAGTATAAGTTGTGTCTaGTCGCCTGGAAGCCTAAGGACACCATGTTGCTCCGATATCCTG | + |
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Preference number: 1 (lower is better) Translates to: KRKGCQPQEPSISCV*SPGSLRTPCCSDIL Trigger: CAGGATATCGGAGCAACATGGTGTCCTTAGGCTTCCAGGCGATCAGACACAACTTATACTTGGCTCTTGTGGTTGGCATCCTTTGCGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051431.10 ENSMUST00000192544.6 |
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| 3UTR GCA 90 bp | CCTAAAGGATGCATAATGTGTCACGCTGGACGGATGACAACCTTGTaGTTTTCTCCCACTGTGGGGTTACCAAACCCTCAGGTAACACAG | + |
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Preference number: 1 (lower is better) Translates to: PKGCIMCHAGRMTTL*FSPTVGLPNPQVTQ Trigger: CTGTGTTACCTGAGGGTTTGGTAACCCCACAGTGGGAGAAAAGCACAAGGTTGTCATCCGTCCAGCGTGACACATTATGCATCCTTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| 3UTR CCA 90 bp | AGGATGCCAACCACAAGAGCCAAGTATAAGTTGTGTCTGATCGCCTaGAAGCCTAAGGACACCATGTTGCTCCGATATCCTGACAGGAGT | + |
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Preference number: 1 (lower is better) Translates to: RMPTTRAKYKLCLIA*KPKDTMLLRYPDRS Trigger: ACTCCTGTCAGGATATCGGAGCAACATGGTGTCCTTAGGCTTCCAGGCGATCAGACACAACTTATACTTGGCTCTTGTGGTTGGCATCCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051431.10 ENSMUST00000192544.6 |
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| 3UTR CCA 90 bp | TCTCAAGGTTATAGTCATGAAACAGTACAGCTCTGTCTGATGGGCTaGAGATCACAGGCTCGCACTGTAGACCCCTTCCTGCTTACTGTG | + |
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Preference number: 1 (lower is better) Translates to: SQGYSHETVQLCLMG*RSQARTVDPFLLTV Trigger: CACAGTAAGCAGGAAGGGGTCTACAGTGCGAGCCTGTGATCTCCAGCCCATCAGACAGAGCTGTACTGTTTCATGACTATAACCTTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| 3UTR TCA 90 bp | GACAGGCACCACGCAGCATTTCTTTGGAGGTTAAAGTGCAGGCTATaGAATGGCATACAAAACAGTGCATGCAGTAGTGCGATCCCAAGG | + |
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Preference number: 1 (lower is better) Translates to: DRHHAAFLWRLKCRL*NGIQNSACSSAIPR Trigger: CCTTGGGATCGCACTACTGCATGCACTGTTTTGTATGCCATTTCATAGCCTGCACTTTAACCTCCAAAGAAATGCTGCGTGGTGCCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| 3UTR GCA 90 bp | ATGGGCATGGTTAGTACAAATCTATTGCAAGGTAAGACGGGTCTGTaGATCAGCTCCACCAGAGAAGCGCAAAGGATGCCAACCACAAGA | + |
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Preference number: 1 (lower is better) Translates to: MGMVSTNLLQGKTGL*ISSTREAQRMPTTR Trigger: TCTTGTGGTTGGCATCCTTTGCGCTTCTCTGGTGGAGCTGATGCACAGACCCGTCTTACCTTGCAATAGATTTGTACTAACCATGCCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051431.10 ENSMUST00000192544.6 |
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| 3UTR CCA 90 bp | TCTTCAAAATTGGAACAATCTTCTCATCAAAGTACTCCATCGCCATaGAGGAGATATCCCGTAACTCCTGCAGCACCTCGTGAGCTCGCT | + |
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Preference number: 1 (lower is better) Translates to: SSKLEQSSHQSTPSP*RRYPVTPAAPRELA Trigger: AGCGAGCTCACGAGGTGCTGCAGGAGTTACGGGATATCTCCTCCATGGCGATGGAGTACTTTGATGAGAAGATTGTTCCAATTTTGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192544.6 |
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| 3UTR CCA 90 bp | GTCTTAGCCAGTACACCTGAACCCTACAGAGAAGAGATACATCAATaGACTCTAACAGTCTCTTGTGCCTGTAAAACTGGAGGACAAATG | + |
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Preference number: 1 (lower is better) Translates to: VLASTPEPYREEIHQ*TLTVSCACKTGGQM Trigger: CATTTGTCCTCCAGTTTTACAGGCACAAGAGACTGTTAGAGTCCATTGATGTATCTCTTCTCTGTAGGGTTCAGGTGTACTGGCTAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| 3UTR TCA 90 bp | AAAGAAAGAGCCTTGGATTTGAGGTTCTGTCTTAGCCAGTACACCTaGACCCTACAGAGAAGAGATACATCAATGGACTCTAACAGTCTC | + |
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Preference number: 1 (lower is better) Translates to: KERALDLRFCLSQYT*TLQRRDTSMDSNSL Trigger: GAGACTGTTAGAGTCCATTGATGTATCTCTTCTCTGTAGGGTTCAGGTGTACTGGCTAAGACAGAACCTCAAATCCAAGGCTCTTTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| 3UTR TCA 90 bp | AACCGGGAGAAAGAACCATTTTATACAATTTGGAGGTTGTTAAAGTaGCCATTCAGGAGGCTGACAGCGCAAGACAGGCTTTTCCAGTTA | + |
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Preference number: 1 (lower is better) Translates to: NREKEPFYTIWRLLK*PFRRLTAQDRLFQL Trigger: TAACTGGAAAAGCCTGTCTTGCGCTGTCAGCCTCCTGAATGGTCACTTTAACAACCTCCAAATTGTATAAAATGGTTCTTTCTCCCGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| 3UTR TCA 90 bp | ACAGGAGTGCAAACAAGACTAAAGCTCTGTTCAGAGTTATTTATGTaGGAGCTTGAAAGTGGTATGAAAAAGCTTCCCTCAGGTCATGCC | + |
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Preference number: 1 (lower is better) Translates to: TGVQTRLKLCSELFM*ELESGMKKLPSGHA Trigger: GGCATGACCTGAGGGAAGCTTTTTCATACCACTTTCAAGCTCTCACATAAATAACTCTGAACAGAGCTTTAGTCTTGTTTGCACTCCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| 3UTR TCA 90 bp | CTGAAGACATACTACATTGTAGATGGACTTTCAAAGTCAGAGATTTaGACAGAACCCAAGGGCAGGATCACGAAGGGACAACACTTAAGA | + |
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Preference number: 1 (lower is better) Translates to: LKTYYIVDGLSKSEI*TEPKGRITKGQHLR Trigger: TCTTAAGTGTTGTCCCTTCGTGATCCTGCCCTTGGGTTCTGTTCAAATCTCTGACTTTGAAAGTCCATCTACAATGTAGTATGTCTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| 3UTR-3UTR TCA 90 bp | TCACGCCTGAGGACAGTCACGCCAGCGCCGTTGGTTCTGACCTGCTGCTGCAGTCTGGAGGAGAGCCCATaGGTCTTCCTGACACATCTG | + |
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Preference number: 2 (lower is better) Translates to: SRLRTVTPAPLVLTCCCSLEESP*VFLTHL Trigger: CAGATGTGTCAGGAAGACTCATGGGCTCTCCTCCAG...ACTGCAGCAGCAGGTCAGAACCAACGGCGCTGGCGTGACTGTCCTCAGGCGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
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| 3UTR-3UTR TCA 90 bp | TTCCAGCTCTGCCAGCCGTGCGTTCTGTTCGCCTATGATCTGGGTCTGCTCGAGCAGCGCCGTTGGTTCTaGCCTGCTGCTGCAGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: FQLCQPCVLFAYDLGLLEQRRWF*PAAAVW Trigger: CCAAACTGCAGCAGCAGGTCAGAACCAACGGCGCTG...CTCGAGCAGACCCAGATCATAGGCGAACAGAACGCACGGCTGGCAGAGCTGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
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| 3UTR CAA 90 bp | GACCCTGAGGAGGTCCCTACTGCACTTTCCATGACTTCCCGGAGCTaGCGTTCCAGCTCTGCCAGCCGTGCGTTCTGTTCGCCTATGATC | + |
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Preference number: 2 (lower is better) Translates to: DPEEVPTALSMTSRS*RSSSASRAFCSPMI Trigger: GATCATAGGCGAACAGAACGCACGGCTGGCAGAGCTGGAACGCAAGCTCCGGGAAGTCATGGAAAGTGCAGTAGGGACCTCCTCAGGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192544.6 |
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| 3UTR-3UTR TCA 90 bp | GAGGAGGTCCCTACTGCACTTTCCATGACTTCCCGGAGCTTGCGTTCCAGCTCTCAGCGCCGTTGGTTCTaGCCTGCTGCTGCAGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: EEVPTALSMTSRSLRSSSQRRWF*PAAAVW Trigger: CCAAACTGCAGCAGCAGGTCAGAACCAACGGCGCTG...AGAGCTGGAACGCAAGCTCCGGGAAGTCATGGAAAGTGCAGTAGGGACCTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
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| 3UTR-3UTR TCA 90 bp | ATTGTTGTCAGGGCTGCGGATGGCCCGGGAACTGGAGGAGAGCCCATGAGTCTTCTGGAGGAGAGCCCATaGGTCTTCCTGACACATCTG | + |
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Preference number: 2 (lower is better) Translates to: IVVRAADGPGTGGEPMSLLEESP*VFLTHL Trigger: CAGATGTGTCAGGAAGACTCATGGGCTCTCCTCCAG...AAGACTCATGGGCTCTCCTCCAGTTCCCGGGCCATCCGCAGCCCTGACAACAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192544.6 ENSMUST00000194213.2 ENSMUST00000195061.6 |
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| 3UTR-3UTR CCA 90 bp | CCGTGCGTTCTGTTCGCCTATGATCTGGGTCTGCTCGAGCAGTTTCTGGTCTTGGGATGGCCCGGGAACTaGAGGAGAGCCCATGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: PCVLFAYDLGLLEQFLVLGWPGN*RRAHES Trigger: AGACTCATGGGCTCTCCTCCAGTTCCCGGGCCATCC...CAAGACCAGAAACTGCTCGAGCAGACCCAGATCATAGGCGAACAGAACGCACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
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| 3UTR CAA 90 bp | AGGACAGTCACGCCAGCGCCGTTGGTTCTGACCTGCTGCTGCAGTTaGGTAACCTCTTGTCTGGACGGGTTTTGCTTGGAGAAGAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: RTVTPAPLVLTCCCS*VTSCLDGFCLEKSC Trigger: GCAGCTCTTCTCCAAGCAAAACCCGTCCAGACAAGAGGTTACCAAACTGCAGCAGCAGGTCAGAACCAACGGCGCTGGCGTGACTGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
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| 3UTR CAA 90 bp | CGAAGCTCAGAAATCTCACGCCTGAGGACAGTCACGCCAGCGCCGTaGGTTCTGACCTGCTGCTGCAGTTTGGTAACCTCTTGTCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: RSSEISRLRTVTPAP*VLTCCCSLVTSCLD Trigger: GTCCAGACAAGAGGTTACCAAACTGCAGCAGCAGGTCAGAACCAACGGCGCTGGCGTGACTGTCCTCAGGCGTGAGATTTCTGAGCTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
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| 3UTR-3UTR TCA 90 bp | AGCGCCGACTCCGGGATAAGCTCACTGACAGGGGACAGGCACCACGCAGCATTTTCAAAGTCAGAGATTTaGACAGAACCCAAGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: SADSGISSLTGDRHHAAFSKSEI*TEPKGR Trigger: CCTGCCCTTGGGTTCTGTTCAAATCTCTGACTTTGA...AAATGCTGCGTGGTGCCTGTCCCCTGTCAGTGAGCTTATCCCGGAGTCGGCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| 3UTR-3UTR GCA 90 bp | GCCAGCCGTGCGTTCTGTTCGCCTATGATCTGGGTCTGCTCGAGCAGTTTCTGGGAGAAGCGCAAAGGATaGCAACCACAAGAGCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: ASRAFCSPMIWVCSSSFWEKRKG*QPQEPS Trigger: ACTTGGCTCTTGTGGTTGGCATCCTTTGCGCTTCTC...CCAGAAACTGCTCGAGCAGACCCAGATCATAGGCGAACAGAACGCACGGCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192544.6 |
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| 3UTR-3UTR CCA 90 bp | TTGAGTGAAGGACGGCTGCTCAAAGTGAGAGCAGGAAGTGGCCACCTTCCACCACGCCTGTGTGTGGTGTaGACTGTGGGCAAACTTAGG | + |
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Preference number: 2 (lower is better) Translates to: LSEGRLLKVRAGSGHLPPRLCVV*TVGKLR Trigger: CCTAAGTTTGCCCACAGTCCACACCACACACAGGCG...TGGTGGAAGGTGGCCACTTCCTGCTCTCACTTTGAGCAGCCGTCCTTCACTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| 3UTR-3UTR CCA 90 bp | TTTCTGCTGCTCTTGCACTTTGGTGCGAAGCTCAGAAATCTCACGCCTGAGGACGGATGGCCCGGGAACTaGAGGAGAGCCCATGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: FLLLLHFGAKLRNLTPEDGWPGN*RRAHES Trigger: AGACTCATGGGCTCTCCTCCAGTTCCCGGGCCATCC...GTCCTCAGGCGTGAGATTTCTGAGCTTCGCACCAAAGTGCAAGAGCAGCAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
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| 3UTR CAA 90 bp | GCCAGCGCCGTTGGTTCTGACCTGCTGCTGCAGTTTGGTAACCTCTaGTCTGGACGGGTTTTGCTTGGAGAAGAGCTGCATTGTTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: ASAVGSDLLLQFGNL*SGRVLLGEELHCCQ Trigger: CTGACAACAATGCAGCTCTTCTCCAAGCAAAACCCGTCCAGACAAGAGGTTACCAAACTGCAGCAGCAGGTCAGAACCAACGGCGCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
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| 3UTR-3UTR TCA 90 bp | CTGCTCAAAGTGAGAGCAGGAAGTGGCCACCTTCCACCAGTAGCAGCCACTGGCTGGAGGTTGTTAAAGTaGCCATTCAGGAGGCTGACA | + |
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Preference number: 2 (lower is better) Translates to: LLKVRAGSGHLPPVAATGWRLLK*PFRRLT Trigger: TGTCAGCCTCCTGAATGGTCACTTTAACAACCTCCA...GCCAGTGGCTGCTACTGGTGGAAGGTGGCCACTTCCTGCTCTCACTTTGAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| 3UTR-3UTR CCA 90 bp | AGCTCTGCCAGCCGTGCGTTCTGTTCGCCTATGATCTGGGTCTGCTCGAGCAGTAGTACTCCATCGCCATaGAGGAGATATCCCGTAACT | + |
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Preference number: 2 (lower is better) Translates to: SSASRAFCSPMIWVCSSSSTPSP*RRYPVT Trigger: AGTTACGGGATATCTCCTCCATGGCGATGGAGTACT...ACTGCTCGAGCAGACCCAGATCATAGGCGAACAGAACGCACGGCTGGCAGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192544.6 |
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| 3UTR-3UTR GCA 90 bp | CTGCTCAAAGTGAGAGCAGGAAGTGGCCACCTTCCACCAGTAGCAGCCACTGGCAACAAAGGAAGATCCTaGCAGGAAATGCAAGCGTTC | + |
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Preference number: 2 (lower is better) Translates to: LLKVRAGSGHLPPVAATGNKGRS*QEMQAF Trigger: GAACGCTTGCATTTCCTGGCAGGATCTTCCTTTGTT...GCCAGTGGCTGCTACTGGTGGAAGGTGGCCACTTCCTGCTCTCACTTTGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| 3UTR-3UTR CCA 90 bp | AGCGCCGACTCCGGGATAAGCTCACTGACAGGGGACAGGCACCACGCAGCATTTGTGCAGGCTATGAAATaGCATACAAAACAGTGCATG | + |
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Preference number: 2 (lower is better) Translates to: SADSGISSLTGDRHHAAFVQAMK*HTKQCM Trigger: CATGCACTGTTTTGTATGCCATTTCATAGCCTGCAC...AAATGCTGCGTGGTGCCTGTCCCCTGTCAGTGAGCTTATCCCGGAGTCGGCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| 3UTR-3UTR GCA 90 bp | CTCTTGCACTTTGGTGCGAAGCTCAGAAATCTCACGCCTGAGGACAGTCACGCCTGTCTGGACGGGTTTTaGTTGGAGAAGAGCTGCATT | + |
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Preference number: 2 (lower is better) Translates to: LLHFGAKLRNLTPEDSHACLDGF*LEKSCI Trigger: AATGCAGCTCTTCTCCAAGCAAAACCCGTCCAGACA...GGCGTGACTGTCCTCAGGCGTGAGATTTCTGAGCTTCGCACCAAAGTGCAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
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| 3UTR CAA 90 bp | ACCAGAGAAGCGCAAAGGATGCCAACCACAAGAGCCAAGTATAAGTaGTGTCTGATCGCCTGGAAGCCTAAGGACACCATGTTGCTCCGA | + |
|
Preference number: 2 (lower is better) Translates to: TREAQRMPTTRAKYK*CLIAWKPKDTMLLR Trigger: TCGGAGCAACATGGTGTCCTTAGGCTTCCAGGCGATCAGACACAACTTATACTTGGCTCTTGTGGTTGGCATCCTTTGCGCTTCTCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051431.10 ENSMUST00000192544.6 |
||
| 3UTR CAA 90 bp | CTCGAGCAGTTTCTGGTCTTGGTCTTGAAGCTGTTTCTGCTGCTCTaGCACTTTGGTGCGAAGCTCAGAAATCTCACGCCTGAGGACAGT | + |
|
Preference number: 2 (lower is better) Translates to: LEQFLVLVLKLFLLL*HFGAKLRNLTPEDS Trigger: ACTGTCCTCAGGCGTGAGATTTCTGAGCTTCGCACCAAAGTGCAAGAGCAGCAGAAACAGCTTCAAGACCAAGACCAGAAACTGCTCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| 3UTR-3UTR CCA 90 bp | CCGTTGGTTCTGACCTGCTGCTGCAGTTTGGTAACCTCTTGTCTGGACGGGTTTTGGACGGGTTTTGCTTaGAGAAGAGCTGCATTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: PLVLTCCCSLVTSCLDGFWTGFA*RRAALL Trigger: CAACAATGCAGCTCTTCTCCAAGCAAAACCCGTCCA...AAACCCGTCCAGACAAGAGGTTACCAAACTGCAGCAGCAGGTCAGAACCAACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| 3UTR CAA 90 bp | CGGGATAAGCTCACTGACAGGGGACAGGCACCACGCAGCATTTCTTaGGAGGTTAAAGTGCAGGCTATGAAATGGCATACAAAACAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: RDKLTDRGQAPRSIS*EVKVQAMKWHTKQC Trigger: GCACTGTTTTGTATGCCATTTCATAGCCTGCACTTTAACCTCCAAAGAAATGCTGCGTGGTGCCTGTCCCCTGTCAGTGAGCTTATCCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR-3UTR TCA 90 bp | ACAGCGCAAGACAGGCTTTTCCAGTTACAAGCTCAAAACAGGAGTGCAAACAAGGGAGGACAAATGGACTaGCAACTCTCTCCCGACAGG | + |
|
Preference number: 2 (lower is better) Translates to: TAQDRLFQLQAQNRSANKGGQMD*QLSPDR Trigger: CCTGTCGGGAGAGAGTTGTCAGTCCATTTGTCCTCC...CTTGTTTGCACTCCTGTTTTGAGCTTGTAACTGGAAAAGCCTGTCTTGCGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR-3UTR TCA 90 bp | CCTTTTATTCCCACCTTCAGATCTTACAGTGTCTGCTTTCTGAGGGTTTGGTACTGGCTGGGAACCATGTaGGCAAAGTGTCTGGGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: PFIPTFRSYSVCFLRVWYWLGTM*AKCLGS Trigger: GCTCCCCAGACACTTTGCTCACATGGTTCCCAGCCA...GTACCAAACCCTCAGAAAGCAGACACTGTAAGATCTGAAGGTGGGAATAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR-3UTR GCA 90 bp | CCATTCTTTTCATGTGTGTATGCCGCCTGTGTGTGGTGTGGACTGTGGGCAAACTGCCTAGGCAATGCATaGATCCATCCATGCAAATGG | + |
|
Preference number: 2 (lower is better) Translates to: PFFSCVYAACVWCGLWANCLGNA*IHPCKW Trigger: CCATTTGCATGGATGGATGCATGCATTGCCTAGGCA...GTTTGCCCACAGTCCACACCACACACAGGCGGCATACACACATGAAAAGAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR-3UTR GCA 90 bp | TTTCTGCTGCTCTTGCACTTTGGTGCGAAGCTCAGAAATCTCACGCCTGAGGACTGTCTGGACGGGTTTTaGTTGGAGAAGAGCTGCATT | + |
|
Preference number: 2 (lower is better) Translates to: FLLLLHFGAKLRNLTPEDCLDGF*LEKSCI Trigger: AATGCAGCTCTTCTCCAAGCAAAACCCGTCCAGACA...GTCCTCAGGCGTGAGATTTCTGAGCTTCGCACCAAAGTGCAAGAGCAGCAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| 3UTR-3UTR GCA 90 bp | GAAGCTGTTTCTGCTGCTCTTGCACTTTGGTGCGAAGCTCAGAAATCTCACGCCGTTCTGACCTGCTGCTaGAGTTTGGTAACCTCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: EAVSAALALWCEAQKSHAVLTCC*SLVTSC Trigger: ACAAGAGGTTACCAAACTGCAGCAGCAGGTCAGAAC...GGCGTGAGATTTCTGAGCTTCGCACCAAAGTGCAAGAGCAGCAGAAACAGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| 3UTR-3UTR CCA 90 bp | AGCTGTTTCTGCTGCTCTTGCACTTTGGTGCGAAGCTCAGAAATCTCACGCCTGTGGACGGGTTTTGCTTaGAGAAGAGCTGCATTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: SCFCCSCTLVRSSEISRLWTGFA*RRAALL Trigger: CAACAATGCAGCTCTTCTCCAAGCAAAACCCGTCCA...CAGGCGTGAGATTTCTGAGCTTCGCACCAAAGTGCAAGAGCAGCAGAAACAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| 3UTR-3UTR CCA 90 bp | AGCTGTTTCTGCTGCTCTTGCACTTTGGTGCGAAGCTCAGAAATCTCACGCCTGGCTGCTCTTGCACTTTaGTGCGAAGCTCAGAAATCT | + |
|
Preference number: 2 (lower is better) Translates to: SCFCCSCTLVRSSEISRLAALAL*CEAQKS Trigger: AGATTTCTGAGCTTCGCACCAAAGTGCAAGAGCAGC...CAGGCGTGAGATTTCTGAGCTTCGCACCAAAGTGCAAGAGCAGCAGAAACAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| 3UTR CAA 90 bp | TTAGCCCCCAAACACGATAGAATGGGCATGGTTAGTACAAATCTATaGCAAGGTAAGACGGGTCTGTGCATCAGCTCCACCAGAGAAGCG | + |
|
Preference number: 2 (lower is better) Translates to: LAPKHDRMGMVSTNL*QGKTGLCISSTREA Trigger: CGCTTCTCTGGTGGAGCTGATGCACAGACCCGTCTTACCTTGCAATAGATTTGTACTAACCATGCCCATTCTATCGTGTTTGGGGGCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051431.10 ENSMUST00000192544.6 |
||
| 3UTR-3UTR GCA 90 bp | GACAGCGCAAGACAGGCTTTTCCAGTTACAAGCTCAAAACAGGAGTGCAAACAAGCGCTGCCTAGGCAATaGATGCATCCATCCATGCAA | + |
|
Preference number: 2 (lower is better) Translates to: DSARQAFPVTSSKQECKQALPRQ*MHPSMQ Trigger: TTGCATGGATGGATGCATGCATTGCCTAGGCAGCGC...TTGTTTGCACTCCTGTTTTGAGCTTGTAACTGGAAAAGCCTGTCTTGCGCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR-3UTR GCA 90 bp | CACCTTCCACCAGTAGCAGCCACTGGCTTTTGTGGACTTAGTGTTTTGTTGATAGATCCTGCCAGGAAATaGAAGCGTTCTCTCCCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: HLPPVAATGFCGLSVLLIDPARK*KRSLPG Trigger: ACCTGGGAGAGAACGCTTGCATTTCCTGGCAGGATC...TATCAACAAAACACTAAGTCCACAAAAGCCAGTGGCTGCTACTGGTGGAAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR-3UTR CCA 90 bp | GACAGGGCCTGTTCTCCTCCCCTCCTGTCCATTCTTTTCATGTGTGTATGCCGCCCAAACACGATAGAATaGGCATGGTTAGTACAAATC | + |
|
Preference number: 2 (lower is better) Translates to: DRACSPPLLSILFMCVCRPNTIE*AWLVQI Trigger: GATTTGTACTAACCATGCCCATTCTATCGTGTTTGG...GCGGCATACACACATGAAAAGAATGGACAGGAGGGGAGGAGAACAGGCCCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR-3UTR GCA 90 bp | CCTAACGCCTGGAGACACCCCTTGCCAGTAGTTTATAAAAATAGTTGCTACTGTGGTAAGACGGGTCTGTaGATCAGCTCCACCAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: PNAWRHPLPVVYKNSCYCGKTGL*ISSTRE Trigger: TTCTCTGGTGGAGCTGATGCACAGACCCGTCTTACC...ACAGTAGCAACTATTTTTATAAACTACTGGCAAGGGGTGTCTCCAGGCGTTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR-3UTR GCA 90 bp | ACAGCGCAAGACAGGCTTTTCCAGTTACAAGCTCAAAACAGGAGTGCAAACAAGTGGTATGAAGTGCGCTaGCTAGGCAATGCATGCATC | + |
|
Preference number: 2 (lower is better) Translates to: TAQDRLFQLQAQNRSANKWYEVR*LGNACI Trigger: GATGCATGCATTGCCTAGGCAGCGCACTTCATACCA...CTTGTTTGCACTCCTGTTTTGAGCTTGTAACTGGAAAAGCCTGTCTTGCGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR-3UTR CCA 90 bp | GATTTCCTAAGAGAGTCTATGGCTTCCGTTGCCTTCCGTCGTTTCCGAGGGGACCCAAACACGATAGAATaGGCATGGTTAGTACAAATC | + |
|
Preference number: 2 (lower is better) Translates to: DFLRESMASVAFRRFRGDPNTIE*AWLVQI Trigger: GATTTGTACTAACCATGCCCATTCTATCGTGTTTGG...GTCCCCTCGGAAACGACGGAAGGCAACGGAAGCCATAGACTCTCTTAGGAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192544.6 |
||
| 3UTR-3UTR CCA 90 bp | GACAGGGGACAGGCACCACGCAGCATTTCTTTGGAGGTTAAAGTGCAGGCTATGCTCCATATACCACTATaGTCTCCCAAAGTGAACATT | + |
|
Preference number: 2 (lower is better) Translates to: DRGQAPRSISLEVKVQAMLHIPL*SPKVNI Trigger: AATGTTCACTTTGGGAGACCATAGTGGTATATGGAG...CATAGCCTGCACTTTAACCTCCAAAGAAATGCTGCGTGGTGCCTGTCCCCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR-3UTR GCA 90 bp | TGTGTAAGTGCTCAGAAAAGCCACTTTATCAGACTAGCTCATGGAAGACTAGAGCGGATGACAACCTTGTaGTTTTCTCCCACTGTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: CVSAQKSHFIRLAHGRLERMTTL*FSPTVG Trigger: CCCCACAGTGGGAGAAAAGCACAAGGTTGTCATCCG...CTCTAGTCTTCCATGAGCTAGTCTGATAAAGTGGCTTTTCTGAGCACTTACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR-3UTR CCA 90 bp | TTGCAAGGTAAGACGGGTCTGTGCATCAGCTCCACCAGAGAAGCGCAAAGGATGACGATAGAATGGGCATaGTTAGTACAAATCTATTGC | + |
|
Preference number: 2 (lower is better) Translates to: LQGKTGLCISSTREAQRMTIEWA*LVQIYC Trigger: GCAATAGATTTGTACTAACCATGCCCATTCTATCGT...CATCCTTTGCGCTTCTCTGGTGGAGCTGATGCACAGACCCGTCTTACCTTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051431.10 ENSMUST00000192544.6 |
||
| 3UTR-3UTR TCA 90 bp | CACCTTCCACCAGTAGCAGCCACTGGCTTTTGTGGACTTAGTGTTTTGTTGATATTGCAAGAGACCTGCTaGGAAAAGAAGATCCAGACA | + |
|
Preference number: 2 (lower is better) Translates to: HLPPVAATGFCGLSVLLILQETC*EKKIQT Trigger: TGTCTGGATCTTCTTTTCTCAGCAGGTCTCTTGCAA...TATCAACAAAACACTAAGTCCACAAAAGCCAGTGGCTGCTACTGGTGGAAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR-3UTR TCA 90 bp | CACCTTCCACCAGTAGCAGCCACTGGCTTTTGTGGACTTAGTGTTTTGTTGATATATGGTCTCCCAAAGTaGACATTACAGACCCCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: HLPPVAATGFCGLSVLLIYGLPK*TLQTPN Trigger: ATTGGGGGTCTGTAATGTTCACTTTGGGAGACCATA...TATCAACAAAACACTAAGTCCACAAAAGCCAGTGGCTGCTACTGGTGGAAGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR-3UTR GCA 90 bp | CATCACTTCAATACCAAAGTACTAACCGTGTCTCAGACATTCCAGACAAAGGTCGAGAAGCGCAAAGGATaGCAACCACAAGAGCCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: HHFNTKVLTVSQTFQTKVEKRKG*QPQEPS Trigger: ACTTGGCTCTTGTGGTTGGCATCCTTTGCGCTTCTC...GACCTTTGTCTGGAATGTCTGAGACACGGTTAGTACTTTGGTATTGAAGTGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR-3UTR GCA 90 bp | CCACGCAGCATTTCTTTGGAGGTTAAAGTGCAGGCTATGAAATGGCATACAAAACTTTTCATGTGTGTATaGCGCCTGTGTGTGGTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: PRSISLEVKVQAMKWHTKLFMCV*RLCVVW Trigger: CCACACCACACACAGGCGGCATACACACATGAAAAG...TTTTGTATGCCATTTCATAGCCTGCACTTTAACCTCCAAAGAAATGCTGCGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR-3UTR CCA 90 bp | CACCTTCCACCAGTAGCAGCCACTGGCTTTTGTGGACTTAGTGTTTTGTTGATAAGACAGGGACCTTTATaGATGACCTTGCTGACAAAT | + |
|
Preference number: 2 (lower is better) Translates to: HLPPVAATGFCGLSVLLIRQGPL*MTLLTN Trigger: ATTTGTCAGCAAGGTCATCCATAAAGGTCCCTGTCT...TATCAACAAAACACTAAGTCCACAAAAGCCAGTGGCTGCTACTGGTGGAAGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR-3UTR TCA 90 bp | GGGAAATTGGGAAAGGCCAACCTCACTCAAGCGTGCCTTAGTTTCGATTTGAGTTTAAAGTGCAGGCTATaGAATGGCATACAAAACAGT | + |
|
Preference number: 2 (lower is better) Translates to: GKLGKANLTQACLSFDLSLKCRL*NGIQNS Trigger: ACTGTTTTGTATGCCATTTCATAGCCTGCACTTTAA...ACTCAAATCGAAACTAAGGCACGCTTGAGTGAGGTTGGCCTTTCCCAATTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR-3UTR CCA 90 bp | CAAGCGAGTCATAGCTTTATTCTCAAGGTTATAGTCATGAAACAGTACAGCTCTATCCATCCATGCAAATaGAGGACACGGCCCCAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: QASHSFILKVIVMKQYSSIHPCK*RTRPQR Trigger: TCTTTGGGGCCGTGTCCTCCATTTGCATGGATGGAT...AGAGCTGTACTGTTTCATGACTATAACCTTGAGAATAAAGCTATGACTCGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR CAA 90 bp | ACTGAAGACATACTACATTGTAGATGGACTTTCAAAGTCAGAGATTaGAACAGAACCCAAGGGCAGGATCACGAAGGGACAACACTTAAG | + |
|
Preference number: 2 (lower is better) Translates to: TEDILHCRWTFKVRD*NRTQGQDHEGTTLK Trigger: CTTAAGTGTTGTCCCTTCGTGATCCTGCCCTTGGGTTCTGTTCAAATCTCTGACTTTGAAAGTCCATCTACAATGTAGTATGTCTTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR-3UTR GCA 90 bp | TCGTCCTCTGGAGCTAGAGCCATATTCCAATCTACTTCCTATTCCGAAGTCGTTTTAGTACAAATCTATTaGAAGGTAAGACGGGTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SSSGARAIFQSTSYSEVVLVQIY*KVRRVC Trigger: ACAGACCCGTCTTACCTTGCAATAGATTTGTACTAA...AACGACTTCGGAATAGGAAGTAGATTGGAATATGGCTCTAGCTCCAGAGGACGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192544.6 |
||
| 3UTR-3UTR GCA 90 bp | GAAAGAACCATTTTATACAATTTGGAGGTTGTTAAAGTGACCATTCAGGAGGCTTTAGTACAAATCTATTaGAAGGTAAGACGGGTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: ERTILYNLEVVKVTIQEALVQIY*KVRRVC Trigger: ACAGACCCGTCTTACCTTGCAATAGATTTGTACTAA...AGCCTCCTGAATGGTCACTTTAACAACCTCCAAATTGTATAAAATGGTTCTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR GCA 72 bp | GACTTCCCGGAGCTTGCGTTCCAGCTCTGCCAGCCGTaGGTTCTGTTCGCCTATGATCTGGGTCTGCTCGAG | + |
|
Preference number: 3 (lower is better) Translates to: DFPELAFQLCQP*VLFAYDLGLLE Trigger: CTCGAGCAGACCCAGATCATAGGCGAACAGAACGCACGGCTGGCAGAGCTGGAACGCAAGCTCCGGGAAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| 3UTR GCA 72 bp | GTTGCCTTCCGTCGTTTCCGAGGGGACTCCTCACTCTaGCCAGACCCTGAGGAGGTCCCTACTGCACTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: VAFRRFRGDSSL*PDPEEVPTALS Trigger: GGAAAGTGCAGTAGGGACCTCCTCAGGGTCTGGGCAGAGTGAGGAGTCCCCTCGGAAACGACGGAAGGCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192544.6 |
||
| 3UTR-3UTR CAA 90 bp | AGGGCTGCGGATGGCCCGGGAACTGGAGGAGAGCCCATGAGTCTTCCTGACACATGGAGAAGAGCTGCATaGTTGTCAGGGCTGCGGATG | + |
|
Preference number: 3 (lower is better) Translates to: RAADGPGTGGEPMSLPDTWRRAA*LSGLRM Trigger: CATCCGCAGCCCTGACAACAATGCAGCTCTTCTCCA...TGTGTCAGGAAGACTCATGGGCTCTCCTCCAGTTCCCGGGCCATCCGCAGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| 3UTR GCA 72 bp | CTGAGGACAGTCACGCCAGCGCCGTTGGTTCTGACCTaGTGCTGCAGTTTGGTAACCTCTTGTCTGGACGGG | + |
|
Preference number: 3 (lower is better) Translates to: LRTVTPAPLVLT*CCSLVTSCLDG Trigger: CCCGTCCAGACAAGAGGTTACCAAACTGCAGCAGCAGGTCAGAACCAACGGCGCTGGCGTGACTGTCCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTCAAAGTGAGAGCAGGAAGTGGCCACCTTCCACCAGTAGCAGCCACTGGCCCTAAGGACACCATGTaGCTCCGATATCCTGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: LLKVRAGSGHLPPVAATGPKDTM*LRYPDR Trigger: CCTGTCAGGATATCGGAGCAACATGGTGTCCTTAGG...GCCAGTGGCTGCTACTGGTGGAAGGTGGCCACTTCCTGCTCTCACTTTGAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR-3UTR CAA 90 bp | GGTGCGAAGCTCAGAAATCTCACGCCTGAGGACAGTCACGCCAGCGCCGTTGGTCTGGACGGGTTTTGCTaGGAGAAGAGCTGCATTGTT | + |
|
Preference number: 3 (lower is better) Translates to: GAKLRNLTPEDSHASAVGLDGFC*EKSCIV Trigger: AACAATGCAGCTCTTCTCCAAGCAAAACCCGTCCAG...ACCAACGGCGCTGGCGTGACTGTCCTCAGGCGTGAGATTTCTGAGCTTCGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| 3UTR-3UTR CAA 90 bp | AATCTCACGCCTGAGGACAGTCACGCCAGCGCCGTTGGTTCTGACCTGCTGCTGTTGTCTGGACGGGTTTaGCTTGGAGAAGAGCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: NLTPEDSHASAVGSDLLLLSGRV*LGEELH Trigger: ATGCAGCTCTTCTCCAAGCAAAACCCGTCCAGACAA...CAGCAGCAGGTCAGAACCAACGGCGCTGGCGTGACTGTCCTCAGGCGTGAGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGTCTTGGTCTTGAAGCTGTTTCTGCTGCTCTTGCACTTTGGTGCGAAGCTGTCACGCCAGCGCCGTaGGTTCTGACCTGCTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SGLGLEAVSAALALWCEAVTPAP*VLTCCC Trigger: GCAGCAGCAGGTCAGAACCAACGGCGCTGGCGTGAC...AGCTTCGCACCAAAGTGCAAGAGCAGCAGAAACAGCTTCAAGACCAAGACCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCTGCCAGCCGTGCGTTCTGTTCGCCTATGATCTGGGTCTGCTCGAGCAGTCTGTTTCTGCTGCTCTaGCACTTTGGTGCGAAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SSASRAFCSPMIWVCSSSLFLLL*HFGAKL Trigger: GAGCTTCGCACCAAAGTGCAAGAGCAGCAGAAACAG...ACTGCTCGAGCAGACCCAGATCATAGGCGAACAGAACGCACGGCTGGCAGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| 3UTR GCA 72 bp | ACAGTCACGCCAGCGCCGTTGGTTCTGACCTGCTGCTaGAGTTTGGTAACCTCTTGTCTGGACGGGTTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: TVTPAPLVLTCC*SLVTSCLDGFC Trigger: GCAAAACCCGTCCAGACAAGAGGTTACCAAACTGCAGCAGCAGGTCAGAACCAACGGCGCTGGCGTGACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| 3UTR GCA 72 bp | ACTTTCCATGACTTCCCGGAGCTTGCGTTCCAGCTCTaGCAGCCGTGCGTTCTGTTCGCCTATGATCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TFHDFPELAFQL*QPCVLFAYDLG Trigger: ACCCAGATCATAGGCGAACAGAACGCACGGCTGGCAGAGCTGGAACGCAAGCTCCGGGAAGTCATGGAAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| 3UTR-3UTR CAA 90 bp | AGCTTGCGTTCCAGCTCTGCCAGCCGTGCGTTCTGTTCGCCTATGATCTGGGTCGGGGCTCTGGTAGAATaGACATATCTCAGTACACGG | + |
|
Preference number: 3 (lower is better) Translates to: SLRSSSASRAFCSPMIWVGALVE*TYLSTR Trigger: CCGTGTACTGAGATATGTCAATTCTACCAGAGCCCC...GACCCAGATCATAGGCGAACAGAACGCACGGCTGGCAGAGCTGGAACGCAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192544.6 |
||
| 3UTR GCA 72 bp | CAGGAGTGGTATGAAGTGCGCTGCCTAGGCAATGCATaGATCCATCCATGCAAATGGAGGACACGGCCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: QEWYEVRCLGNA*IHPCKWRTRPQ Trigger: TTGGGGCCGTGTCCTCCATTTGCATGGATGGATGCATGCATTGCCTAGGCAGCGCACTTCATACCACTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR-3UTR CAA 90 bp | GATTTCCTAAGAGAGTCTATGGCTTCCGTTGCCTTCCGTCGTTTCCGAGGGGACTGGAGAAGAGCTGCATaGTTGTCAGGGCTGCGGATG | + |
|
Preference number: 3 (lower is better) Translates to: DFLRESMASVAFRRFRGDWRRAA*LSGLRM Trigger: CATCCGCAGCCCTGACAACAATGCAGCTCTTCTCCA...GTCCCCTCGGAAACGACGGAAGGCAACGGAAGCCATAGACTCTCTTAGGAAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192544.6 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGTCCCTACTGCACTTTCCATGACTTCCCGGAGCTTGCGTTCCAGCTCTGCCAGTTTGGTAACCTCTaGTCTGGACGGGTTTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GGPYCTFHDFPELAFQLCQFGNL*SGRVLL Trigger: AAGCAAAACCCGTCCAGACAAGAGGTTACCAAACTG...GCAGAGCTGGAACGCAAGCTCCGGGAAGTCATGGAAAGTGCAGTAGGGACCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| 3UTR-3UTR CAA 90 bp | AGCTTGCGTTCCAGCTCTGCCAGCCGTGCGTTCTGTTCGCCTATGATCTGGGTCGAGCAGTTTCTGGTCTaGGTCTTGAAGCTGTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLRSSSASRAFCSPMIWVEQFLV*VLKLFL Trigger: CAGAAACAGCTTCAAGACCAAGACCAGAAACTGCTC...GACCCAGATCATAGGCGAACAGAACGCACGGCTGGCAGAGCTGGAACGCAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTCAAAGTGAGAGCAGGAAGTGGCCACCTTCCACCAGTAGCAGCCACTGGCTTCAAAGTCAGAGATTaGAACAGAACCCAAGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LLKVRAGSGHLPPVAATGFKVRD*NRTQGQ Trigger: CTGCCCTTGGGTTCTGTTCAAATCTCTGACTTTGAA...GCCAGTGGCTGCTACTGGTGGAAGGTGGCCACTTCCTGCTCTCACTTTGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR GCA 72 bp | GACACCATGTTGCTCCGATATCCTGACAGGAGTAACTaGTTAAACTCTCAGCCACGGACGTCGTCCTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: DTMLLRYPDRSN*LNSQPRTSSSG Trigger: TCCAGAGGACGACGTCCGTGGCTGAGAGTTTAAGCAGTTACTCCTGTCAGGATATCGGAGCAACATGGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051431.10 ENSMUST00000192544.6 |
||
| 3UTR GCA 72 bp | TGCTGCAGTTTGGTAACCTCTTGTCTGGACGGGTTTTaGTTGGAGAAGAGCTGCATTGTTGTCAGGGCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: CCSLVTSCLDGF*LEKSCIVVRAA Trigger: CGCAGCCCTGACAACAATGCAGCTCTTCTCCAAGCAAAACCCGTCCAGACAAGAGGTTACCAAACTGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| 3UTR GCA 72 bp | TCGTTTGGATTTCCTAAGAGAGTCTATGGCTTCCGTTaGCTTCCGTCGTTTCCGAGGGGACTCCTCACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SFGFPKRVYGFR*LPSFPRGLLTL Trigger: CAGAGTGAGGAGTCCCCTCGGAAACGACGGAAGGCAACGGAAGCCATAGACTCTCTTAGGAAATCCAAACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192544.6 |
||
| 3UTR-3UTR CAA 90 bp | TCTTGCACTTTGGTGCGAAGCTCAGAAATCTCACGCCTGAGGACAGTCACGCCATTGTCTGGACGGGTTTaGCTTGGAGAAGAGCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: SCTLVRSSEISRLRTVTPLSGRV*LGEELH Trigger: ATGCAGCTCTTCTCCAAGCAAAACCCGTCCAGACAA...TGGCGTGACTGTCCTCAGGCGTGAGATTTCTGAGCTTCGCACCAAAGTGCAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| 3UTR-3UTR CAA 90 bp | TTGCAAGGTAAGACGGGTCTGTGCATCAGCTCCACCAGAGAAGCGCAAAGGATGGAGCAGTTTCTGGTCTaGGTCTTGAAGCTGTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LQGKTGLCISSTREAQRMEQFLV*VLKLFL Trigger: CAGAAACAGCTTCAAGACCAAGACCAGAAACTGCTC...CATCCTTTGCGCTTCTCTGGTGGAGCTGATGCACAGACCCGTCTTACCTTGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192544.6 |
||
| 3UTR TCA 72 bp | GGATGCCAACCACAAGAGCCAAGTATAAGTTGTGTCTaGTCGCCTGGAAGCCTAAGGACACCATGTTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GCQPQEPSISCV*SPGSLRTPCCS Trigger: GGAGCAACATGGTGTCCTTAGGCTTCCAGGCGATCAGACACAACTTATACTTGGCTCTTGTGGTTGGCATCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051431.10 ENSMUST00000192544.6 |
||
| 3UTR TCA 72 bp | AACTTTCCCTCAGTTGGGTCCCTACTAAGTCATGGTTaGCCCAGGAGCACAGAGCTGAGTCAGATCAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: NFPSVGSLLSHG*PRSTELSQIRG Trigger: ACCTCTGATCTGACTCAGCTCTGTGCTCCTGGGTCAACCATGACTTAGTAGGGACCCAACTGAGGGAAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR GCA 72 bp | GAAGTGCGCTGCCTAGGCAATGCATGCATCCATCCATaGAAATGGAGGACACGGCCCCAAAGAAAACTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: EVRCLGNACIHP*KWRTRPQRKLK Trigger: TTTCAGTTTTCTTTGGGGCCGTGTCCTCCATTTGCATGGATGGATGCATGCATTGCCTAGGCAGCGCACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR GCA 72 bp | AGATCAACACCAGTGCAGGAGTGGTATGAAGTGCGCTaGCTAGGCAATGCATGCATCCATCCATGCAAATGG | + |
|
Preference number: 3 (lower is better) Translates to: RSTPVQEWYEVR*LGNACIHPCKW Trigger: CCATTTGCATGGATGGATGCATGCATTGCCTAGGCAGCGCACTTCATACCACTCCTGCACTGGTGTTGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR GCA 72 bp | GCATGGGAATGGTTTGATGCAAACAAAGGAAGATCCTaGCAGGAAATGCAAGCGTTCTCTCCCAGGTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: AWEWFDANKGRS*QEMQAFSPRWL Trigger: CAGCCACCTGGGAGAGAACGCTTGCATTTCCTGGCAGGATCTTCCTTTGTTTGCATCAAACCATTCCCATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR GCA 72 bp | CTTGGGAAATTGGGAAAGGCCAACCTCACTCAAGCGTaGCTTAGTTTCGATTTGAGTGAAGGACGGCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LGKLGKANLTQA*LSFDLSEGRLL Trigger: GAGCAGCCGTCCTTCACTCAAATCGAAACTAAGGCACGCTTGAGTGAGGTTGGCCTTTCCCAATTTCCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR CCA 72 bp | CGCTGCCTAGGCAATGCATGCATCCATCCATGCAAATaGAGGACACGGCCCCAAAGAAAACTGAAAGCATGT | + |
|
Preference number: 3 (lower is better) Translates to: RCLGNACIHPCK*RTRPQRKLKAC Trigger: ACATGCTTTCAGTTTTCTTTGGGGCCGTGTCCTCCATTTGCATGGATGGATGCATGCATTGCCTAGGCAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR CCA 72 bp | TATAGTCATGAAACAGTACAGCTCTGTCTGATGGGCTaGAGATCACAGGCTCGCACTGTAGACCCCTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: YSHETVQLCLMG*RSQARTVDPFL Trigger: CAGGAAGGGGTCTACAGTGCGAGCCTGTGATCTCCAGCCCATCAGACAGAGCTGTACTGTTTCATGACTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGCTGCTCTTGCACTTTGGTGCGAAGCTCAGAAATCTCACGCCTGAGGACACAGTTTGGTAACCTCTaGTCTGGACGGGTTTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: FCCSCTLVRSSEISRLRTQFGNL*SGRVLL Trigger: AAGCAAAACCCGTCCAGACAAGAGGTTACCAAACTG...TGTCCTCAGGCGTGAGATTTCTGAGCTTCGCACCAAAGTGCAAGAGCAGCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| 3UTR CCA 72 bp | AACAAACTTTCCCTCAGTTGGGTCCCTACTAAGTCATaGTTGACCCAGGAGCACAGAGCTGAGTCAGATCAG | + |
|
Preference number: 3 (lower is better) Translates to: NKLSLSWVPTKS*LTQEHRAESDQ Trigger: CTGATCTGACTCAGCTCTGTGCTCCTGGGTCAACCATGACTTAGTAGGGACCCAACTGAGGGAAAGTTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR CCA 72 bp | TGTCCATTCTTTTCATGTGTGTATGCCGCCTGTGTGTaGTGTGGACTGTGGGCAAACTTAGGCATGGGAATG | + |
|
Preference number: 3 (lower is better) Translates to: CPFFSCVYAACV*CGLWANLGMGM Trigger: CATTCCCATGCCTAAGTTTGCCCACAGTCCACACCACACACAGGCGGCATACACACATGAAAAGAATGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR GCA 72 bp | GTTAGTACAAATCTATTGCAAGGTAAGACGGGTCTGTaGATCAGCTCCACCAGAGAAGCGCAAAGGATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: VSTNLLQGKTGL*ISSTREAQRMP Trigger: TGGCATCCTTTGCGCTTCTCTGGTGGAGCTGATGCACAGACCCGTCTTACCTTGCAATAGATTTGTACTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051431.10 ENSMUST00000192544.6 |
||
| 3UTR CCA 72 bp | ACCACAAGAGCCAAGTATAAGTTGTGTCTGATCGCCTaGAAGCCTAAGGACACCATGTTGCTCCGATATCCT | + |
|
Preference number: 3 (lower is better) Translates to: TTRAKYKLCLIA*KPKDTMLLRYP Trigger: AGGATATCGGAGCAACATGGTGTCCTTAGGCTTCCAGGCGATCAGACACAACTTATACTTGGCTCTTGTGGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051431.10 ENSMUST00000192544.6 |
||
| 3UTR CCA 72 bp | TTGGAACAATCTTCTCATCAAAGTACTCCATCGCCATaGAGGAGATATCCCGTAACTCCTGCAGCACCTCGT | + |
|
Preference number: 3 (lower is better) Translates to: LEQSSHQSTPSP*RRYPVTPAAPR Trigger: ACGAGGTGCTGCAGGAGTTACGGGATATCTCCTCCATGGCGATGGAGTACTTTGATGAGAAGATTGTTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192544.6 |
||
| 3UTR-3UTR CAA 90 bp | TCGTCCTCTGGAGCTAGAGCCATATTCCAATCTACTTCCTATTCCGAAGTCGTTCTGGACGGGTTTTGCTaGGAGAAGAGCTGCATTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SSSGARAIFQSTSYSEVVLDGFC*EKSCIV Trigger: AACAATGCAGCTCTTCTCCAAGCAAAACCCGTCCAG...AACGACTTCGGAATAGGAAGTAGATTGGAATATGGCTCTAGCTCCAGAGGACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192544.6 |
||
| 3UTR-3UTR CAA 90 bp | TCGTCCTCTGGAGCTAGAGCCATATTCCAATCTACTTCCTATTCCGAAGTCGTTAGAGCCAAGTATAAGTaGTGTCTGATCGCCTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SSSGARAIFQSTSYSEVVRAKYK*CLIAWK Trigger: CTTCCAGGCGATCAGACACAACTTATACTTGGCTCT...AACGACTTCGGAATAGGAAGTAGATTGGAATATGGCTCTAGCTCCAGAGGACGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192544.6 |
||
| 3UTR TCA 72 bp | TGTGGACTGTGGGCAAACTTAGGCATGGGAATGGTTTaGTGCAAACAAAGGAAGATCCTGCCAGGAAATGCA | + |
|
Preference number: 3 (lower is better) Translates to: CGLWANLGMGMV*CKQRKILPGNA Trigger: TGCATTTCCTGGCAGGATCTTCCTTTGTTTGCATCAAACCATTCCCATGCCTAAGTTTGCCCACAGTCCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR GCA 72 bp | GGTTTGATGCAAACAAAGGAAGATCCTGCCAGGAAATaGAAGCGTTCTCTCCCAGGTGGCTGGTTAAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: GLMQTKEDPARK*KRSLPGGWLSF Trigger: AAAACTTAACCAGCCACCTGGGAGAGAACGCTTGCATTTCCTGGCAGGATCTTCCTTTGTTTGCATCAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR-3UTR CAA 90 bp | GCCCCCAAACACGATAGAATGGGCATGGTTAGTACAAATCTATTGCAAGGTAAGAGAGCCAAGTATAAGTaGTGTCTGATCGCCTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: APKHDRMGMVSTNLLQGKRAKYK*CLIAWK Trigger: CTTCCAGGCGATCAGACACAACTTATACTTGGCTCT...CTTACCTTGCAATAGATTTGTACTAACCATGCCCATTCTATCGTGTTTGGGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051431.10 ENSMUST00000192544.6 |
||
| 3UTR TCA 72 bp | GCCTTGGATTTGAGGTTCTGTCTTAGCCAGTACACCTaGACCCTACAGAGAAGAGATACATCAATGGACTCT | + |
|
Preference number: 3 (lower is better) Translates to: ALDLRFCLSQYT*TLQRRDTSMDS Trigger: AGAGTCCATTGATGTATCTCTTCTCTGTAGGGTTCAGGTGTACTGGCTAAGACAGAACCTCAAATCCAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR TCA 72 bp | CACGCAGCATTTCTTTGGAGGTTAAAGTGCAGGCTATaGAATGGCATACAAAACAGTGCATGCAGTAGTGCG | + |
|
Preference number: 3 (lower is better) Translates to: HAAFLWRLKCRL*NGIQNSACSSA Trigger: CGCACTACTGCATGCACTGTTTTGTATGCCATTTCATAGCCTGCACTTTAACCTCCAAAGAAATGCTGCGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR GCA 72 bp | AACACGATAGAATGGGCATGGTTAGTACAAATCTATTaGAAGGTAAGACGGGTCTGTGCATCAGCTCCACCA | + |
|
Preference number: 3 (lower is better) Translates to: NTIEWAWLVQIY*KVRRVCASAPP Trigger: TGGTGGAGCTGATGCACAGACCCGTCTTACCTTGCAATAGATTTGTACTAACCATGCCCATTCTATCGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051431.10 ENSMUST00000192544.6 |
||
| 3UTR-3UTR CAA 90 bp | ATGGTTAGTACAAATCTATTGCAAGGTAAGACGGGTCTGTGCATCAGCTCCACCGTTAGTACAAATCTATaGCAAGGTAAGACGGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: MVSTNLLQGKTGLCISSTVSTNL*QGKTGL Trigger: CAGACCCGTCTTACCTTGCAATAGATTTGTACTAAC...GGTGGAGCTGATGCACAGACCCGTCTTACCTTGCAATAGATTTGTACTAACCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051431.10 ENSMUST00000192544.6 |
||
| 3UTR-3UTR CAA 90 bp | TCGTCCTCTGGAGCTAGAGCCATATTCCAATCTACTTCCTATTCCGAAGTCGTTGTTAGTACAAATCTATaGCAAGGTAAGACGGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SSSGARAIFQSTSYSEVVVSTNL*QGKTGL Trigger: CAGACCCGTCTTACCTTGCAATAGATTTGTACTAAC...AACGACTTCGGAATAGGAAGTAGATTGGAATATGGCTCTAGCTCCAGAGGACGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192544.6 |
||
| 3UTR-3UTR CAA 90 bp | CACCTTCCACCAGTAGCAGCCACTGGCTTTTGTGGACTTAGTGTTTTGTTGATACATAAGGATTCTCCTTaGAAATCCTGTATGCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: HLPPVAATGFCGLSVLLIHKDSP*KSCMLL Trigger: CAGCAGCATACAGGATTTCAAAGGAGAATCCTTATG...TATCAACAAAACACTAAGTCCACAAAAGCCAGTGGCTGCTACTGGTGGAAGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR TCA 72 bp | CTGATTCCCAGGCTTCTAAAGCTCGTGGCTATCTTCTaGCACAATGGGAAGAAGGTGAATTTAATGCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LIPRLLKLVAIF*HNGKKVNLMLE Trigger: CTCAAGCATTAAATTCACCTTCTTCCCATTGTGTCAGAAGATAGCCACGAGCTTTAGAAGCCTGGGAATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR CCA 72 bp | AGTACACCTGAACCCTACAGAGAAGAGATACATCAATaGACTCTAACAGTCTCTTGTGCCTGTAAAACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: STPEPYREEIHQ*TLTVSCACKTG Trigger: TCCAGTTTTACAGGCACAAGAGACTGTTAGAGTCCATTGATGTATCTCTTCTCTGTAGGGTTCAGGTGTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR CCA 72 bp | CATGATATAATTTTCTTCAACAAACTTTCCCTCAGTTaGGTCCCTACTAAGTCATGGTTGACCCAGGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: HDIIFFNKLSLS*VPTKSWLTQEH Trigger: GTGCTCCTGGGTCAACCATGACTTAGTAGGGACCCAACTGAGGGAAAGTTTGTTGAAGAAAATTATATCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR CCA 72 bp | ACCTTCAGATCTTACAGTGTCTGCTTTCTGAGGGTTTaGTACAGGCAACGAACAAGTATTCACACTAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: TFRSYSVCFLRV*YRQRTSIHTRR Trigger: TCTTCTAGTGTGAATACTTGTTCGTTGCCTGTACCAAACCCTCAGAAAGCAGACACTGTAAGATCTGAAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR TCA 72 bp | AAAGAACCATTTTATACAATTTGGAGGTTGTTAAAGTaGCCATTCAGGAGGCTGACAGCGCAAGACAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: KEPFYTIWRLLK*PFRRLTAQDRL Trigger: AAGCCTGTCTTGCGCTGTCAGCCTCCTGAATGGTCACTTTAACAACCTCCAAATTGTATAAAATGGTTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR TCA 72 bp | CAAACAAGACTAAAGCTCTGTTCAGAGTTATTTATGTaGGAGCTTGAAAGTGGTATGAAAAAGCTTCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: QTRLKLCSELFM*ELESGMKKLPS Trigger: TGAGGGAAGCTTTTTCATACCACTTTCAAGCTCTCACATAAATAACTCTGAACAGAGCTTTAGTCTTGTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| CDS-3UTR CCA 90 bp | TGTTGTCAGGGCTGCGGATGGCCCGGGAACTGGAGGAGAGCCCATGAGTCTTCCTTGTTTTGGGGCAGGTaGTCCGGTGCCAGCGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CCQGCGWPGNWRRAHESSLFWGR*SGASAG Trigger: GCCCGCGCTGGCACCGGACCACCTGCCCCAAAACAA...GGAAGACTCATGGGCTCTCCTCCAGTTCCCGGGCCATCCGCAGCCCTGACAACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000192544.6 ENSMUST00000194213.2 ENSMUST00000195061.6 |
||
| CDS-3UTR CCA 90 bp | ACGCCTGAGGACAGTCACGCCAGCGCCGTTGGTTCTGACCTGCTGCTGCAGTTTTTGTTTTGGGGCAGGTaGTCCGGTGCCAGCGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TPEDSHASAVGSDLLLQFLFWGR*SGASAG Trigger: GCCCGCGCTGGCACCGGACCACCTGCCCCAAAACAA...AAACTGCAGCAGCAGGTCAGAACCAACGGCGCTGGCGTGACTGTCCTCAGGCGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| CDS-3UTR CCA 90 bp | TTGAGTGAAGGACGGCTGCTCAAAGTGAGAGCAGGAAGTGGCCACCTTCCACCATTGTTTTGGGGCAGGTaGTCCGGTGCCAGCGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSEGRLLKVRAGSGHLPPLFWGR*SGASAG Trigger: GCCCGCGCTGGCACCGGACCACCTGCCCCAAAACAA...TGGTGGAAGGTGGCCACTTCCTGCTCTCACTTTGAGCAGCCGTCCTTCACTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR CAA 72 bp | GAGGTCCCTACTGCACTTTCCATGACTTCCCGGAGCTaGCGTTCCAGCTCTGCCAGCCGTGCGTTCTGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: EVPTALSMTSRS*RSSSASRAFCS Trigger: CGAACAGAACGCACGGCTGGCAGAGCTGGAACGCAAGCTCCGGGAAGTCATGGAAAGTGCAGTAGGGACCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| CDS-3UTR CCA 90 bp | ATTGTTGTCAGGGCTGCGGATGGCCCGGGAACTGGAGGAGAGCCCATGAGTCTTTCTCGATGGCTACGATaGGCAGCGCCACCAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IVVRAADGPGTGGEPMSLSRWLR*AAPPVC Trigger: ACACACTGGTGGCGCTGCCCATCGTAGCCATCGAGA...AAGACTCATGGGCTCTCCTCCAGTTCCCGGGCCATCCGCAGCCCTGACAACAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192544.6 ENSMUST00000194213.2 ENSMUST00000195061.6 |
||
| CDS-3UTR CCA 90 bp | GCCAGCCGTGCGTTCTGTTCGCCTATGATCTGGGTCTGCTCGAGCAGTTTCTGGTCTCGATGGCTACGATaGGCAGCGCCACCAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASRAFCSPMIWVCSSSFWSRWLR*AAPPVC Trigger: ACACACTGGTGGCGCTGCCCATCGTAGCCATCGAGA...CCAGAAACTGCTCGAGCAGACCCAGATCATAGGCGAACAGAACGCACGGCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| CDS-3UTR GCA 90 bp | CTGCTCAAAGTGAGAGCAGGAAGTGGCCACCTTCCACCAGTAGCAGCCACTGGCGTCTATGGCTTCCGTTaGCTTCCGTCGTTTCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLKVRAGSGHLPPVAATGVYGFR*LPSFPR Trigger: CCTCGGAAACGACGGAAGGCAACGGAAGCCATAGAC...GCCAGTGGCTGCTACTGGTGGAAGGTGGCCACTTCCTGCTCTCACTTTGAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| CDS-3UTR TCA 90 bp | GTCAGGGCTGCGGATGGCCCGGGAACTGGAGGAGAGCCCATGAGTCTTCCTGACGCTTTAACTTGCTTCTaGCACAGGTTATGGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: VRAADGPGTGGEPMSLPDALTCF*HRLWNL Trigger: GAGGTTCCATAACCTGTGTCAGAAGCAAGTTAAAGC...GTCAGGAAGACTCATGGGCTCTCCTCCAGTTCCCGGGCCATCCGCAGCCCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192544.6 ENSMUST00000194213.2 ENSMUST00000195061.6 |
||
| CDS-3UTR TCA 90 bp | GACAGGGGACAGGCACCACGCAGCATTTCTTTGGAGGTTAAAGTGCAGGCTATGCAGAAATCTCACGCCTaGGGACAGTCACGCCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: DRGQAPRSISLEVKVQAMQKSHA*GQSRQR Trigger: GCGCTGGCGTGACTGTCCTCAGGCGTGAGATTTCTG...CATAGCCTGCACTTTAACCTCCAAAGAAATGCTGCGTGGTGCCTGTCCCCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR CAA 72 bp | ACGCCAGCGCCGTTGGTTCTGACCTGCTGCTGCAGTTaGGTAACCTCTTGTCTGGACGGGTTTTGCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TPAPLVLTCCCS*VTSCLDGFCLE Trigger: CTCCAAGCAAAACCCGTCCAGACAAGAGGTTACCAAACTGCAGCAGCAGGTCAGAACCAACGGCGCTGGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| 3UTR CAA 72 bp | GAAATCTCACGCCTGAGGACAGTCACGCCAGCGCCGTaGGTTCTGACCTGCTGCTGCAGTTTGGTAACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EISRLRTVTPAP*VLTCCCSLVTS Trigger: AGAGGTTACCAAACTGCAGCAGCAGGTCAGAACCAACGGCGCTGGCGTGACTGTCCTCAGGCGTGAGATTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| CDS-3UTR TCA 90 bp | TTGAGTGAAGGACGGCTGCTCAAAGTGAGAGCAGGAAGTGGCCACCTTCCACCACGTTCTGTTCGCCTATaGTCTGGGTCTGCTCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSEGRLLKVRAGSGHLPPRSVRL*SGSARA Trigger: TGCTCGAGCAGACCCAGATCATAGGCGAACAGAACG...TGGTGGAAGGTGGCCACTTCCTGCTCTCACTTTGAGCAGCCGTCCTTCACTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| CDS-3UTR CCA 90 bp | TCTTGCACTTTGGTGCGAAGCTCAGAAATCTCACGCCTGAGGACAGTCACGCCATCTCGATGGCTACGATaGGCAGCGCCACCAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SCTLVRSSEISRLRTVTPSRWLR*AAPPVC Trigger: ACACACTGGTGGCGCTGCCCATCGTAGCCATCGAGA...TGGCGTGACTGTCCTCAGGCGTGAGATTTCTGAGCTTCGCACCAAAGTGCAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| CDS-3UTR CCA 90 bp | AGCGCCGACTCCGGGATAAGCTCACTGACAGGGGACAGGCACCACGCAGCATTTGCTGCTCTTGCACTTTaGTGCGAAGCTCAGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: SADSGISSLTGDRHHAAFAALAL*CEAQKS Trigger: AGATTTCTGAGCTTCGCACCAAAGTGCAAGAGCAGC...AAATGCTGCGTGGTGCCTGTCCCCTGTCAGTGAGCTTATCCCGGAGTCGGCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| CDS-3UTR TCA 90 bp | CCGGAGCTTGCGTTCCAGCTCTGCCAGCCGTGCGTTCTGTTCGCCTATGATCTGGCTTTAACTTGCTTCTaGCACAGGTTATGGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: PELAFQLCQPCVLFAYDLALTCF*HRLWNL Trigger: GAGGTTCCATAACCTGTGTCAGAAGCAAGTTAAAGC...CAGATCATAGGCGAACAGAACGCACGGCTGGCAGAGCTGGAACGCAAGCTCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| CDS-3UTR TCA 90 bp | ACCATGTTGCTCCGATATCCTGACAGGAGTAACTGCTTAAACTCTCAGCCACGGCAGCGCCGTTGGTTCTaGCCTGCTGCTGCAGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TMLLRYPDRSNCLNSQPRQRRWF*PAAAVW Trigger: CCAAACTGCAGCAGCAGGTCAGAACCAACGGCGCTG...CCGTGGCTGAGAGTTTAAGCAGTTACTCCTGTCAGGATATCGGAGCAACATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| CDS-3UTR TCA 90 bp | TTGAGTGAAGGACGGCTGCTCAAAGTGAGAGCAGGAAGTGGCCACCTTCCACCACTACTGCACTTTCCATaGCTTCCCGGAGCTTGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSEGRLLKVRAGSGHLPPLLHFP*LPGACV Trigger: AACGCAAGCTCCGGGAAGTCATGGAAAGTGCAGTAG...TGGTGGAAGGTGGCCACTTCCTGCTCTCACTTTGAGCAGCCGTCCTTCACTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| CDS-3UTR CCA 90 bp | ATTGTTGTCAGGGCTGCGGATGGCCCGGGAACTGGAGGAGAGCCCATGAGTCTTAGTACTCCATCGCCATaGAGGAGATATCCCGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: IVVRAADGPGTGGEPMSLSTPSP*RRYPVT Trigger: AGTTACGGGATATCTCCTCCATGGCGATGGAGTACT...AAGACTCATGGGCTCTCCTCCAGTTCCCGGGCCATCCGCAGCCCTGACAACAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000194213.2 ENSMUST00000195061.6 |
||
| 3UTR CAA 72 bp | CTGCTGCAGTTTGGTAACCTCTTGTCTGGACGGGTTTaGCTTGGAGAAGAGCTGCATTGTTGTCAGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLQFGNLLSGRV*LGEELHCCQGC Trigger: GCAGCCCTGACAACAATGCAGCTCTTCTCCAAGCAAAACCCGTCCAGACAAGAGGTTACCAAACTGCAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| CDS-3UTR TCA 90 bp | GACAGGGCCTGTTCTCCTCCCCTCCTGTCCATTCTTTTCATGTGTGTATGCCGCTTCTGGTCTTGGTCTTaGAGCTGTTTCTGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DRACSPPLLSILFMCVCRFWSWS*SCFCCS Trigger: AGAGCAGCAGAAACAGCTTCAAGACCAAGACCAGAA...GCGGCATACACACATGAAAAGAATGGACAGGAGGGGAGGAGAACAGGCCCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| CDS-3UTR CCA 90 bp | GGGAAATTGGGAAAGGCCAACCTCACTCAAGCGTGCCTTAGTTTCGATTTGAGTTCTCGATGGCTACGATaGGCAGCGCCACCAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GKLGKANLTQACLSFDLSSRWLR*AAPPVC Trigger: ACACACTGGTGGCGCTGCCCATCGTAGCCATCGAGA...ACTCAAATCGAAACTAAGGCACGCTTGAGTGAGGTTGGCCTTTCCCAATTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| CDS-3UTR TCA 90 bp | TTGAGTGAAGGACGGCTGCTCAAAGTGAGAGCAGGAAGTGGCCACCTTCCACCAGCAAGGATGTCTGCATaGCGAGCTAAAGAATGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSEGRLLKVRAGSGHLPPARMSA*RAKEWF Trigger: AAACCATTCTTTAGCTCGTCATGCAGACATCCTTGC...TGGTGGAAGGTGGCCACTTCCTGCTCTCACTTTGAGCAGCCGTCCTTCACTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| CDS-3UTR GCA 90 bp | CATCACTTCAATACCAAAGTACTAACCGTGTCTCAGACATTCCAGACAAAGGTCGGGGACTCCTCACTCTaGCCAGACCCTGAGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HHFNTKVLTVSQTFQTKVGDSSL*PDPEEV Trigger: GACCTCCTCAGGGTCTGGGCAGAGTGAGGAGTCCCC...GACCTTTGTCTGGAATGTCTGAGACACGGTTAGTACTTTGGTATTGAAGTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| CDS-3UTR CCA 90 bp | TCTTCAAAATTGGAACAATCTTCTCATCAAAGTACTCCATCGCCATGGAGGAGATTGTTTTGGGGCAGGTaGTCCGGTGCCAGCGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSKLEQSSHQSTPSPWRRLFWGR*SGASAG Trigger: GCCCGCGCTGGCACCGGACCACCTGCCCCAAAACAA...TCTCCTCCATGGCGATGGAGTACTTTGATGAGAAGATTGTTCCAATTTTGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000192544.6 |
||
| CDS-3UTR CCA 90 bp | TGCTGCTCTTGCACTTTGGTGCGAAGCTCAGAAATCTCACGCCTGAGGACAGTCAGTACTCCATCGCCATaGAGGAGATATCCCGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: CCSCTLVRSSEISRLRTVSTPSP*RRYPVT Trigger: AGTTACGGGATATCTCCTCCATGGCGATGGAGTACT...GACTGTCCTCAGGCGTGAGATTTCTGAGCTTCGCACCAAAGTGCAAGAGCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195061.6 |
||
| 3UTR CAA 72 bp | GCGCAAAGGATGCCAACCACAAGAGCCAAGTATAAGTaGTGTCTGATCGCCTGGAAGCCTAAGGACACCATG | + |
|
Preference number: 4 (lower is better) Translates to: AQRMPTTRAKYK*CLIAWKPKDTM Trigger: CATGGTGTCCTTAGGCTTCCAGGCGATCAGACACAACTTATACTTGGCTCTTGTGGTTGGCATCCTTTGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051431.10 ENSMUST00000192544.6 |
||
| 3UTR CAA 72 bp | AAACTTTCCCTCAGTTGGGTCCCTACTAAGTCATGGTaGACCCAGGAGCACAGAGCTGAGTCAGATCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLSLSWVPTKSW*TQEHRAESDQR Trigger: CCTCTGATCTGACTCAGCTCTGTGCTCCTGGGTCAACCATGACTTAGTAGGGACCCAACTGAGGGAAAGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR CAA 72 bp | GGATGCATAATGTGTCACGCTGGACGGATGACAACCTaGTGCTTTTCTCCCACTGTGGGGTTACCAAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: GCIMCHAGRMTT*CFSPTVGLPNP Trigger: AGGGTTTGGTAACCCCACAGTGGGAGAAAAGCACAAGGTTGTCATCCGTCCAGCGTGACACATTATGCATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR CAA 72 bp | TGCAGTTTGGTAACCTCTTGTCTGGACGGGTTTTGCTaGGAGAAGAGCTGCATTGTTGTCAGGGCTGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CSLVTSCLDGFC*EKSCIVVRAAD Trigger: ATCCGCAGCCCTGACAACAATGCAGCTCTTCTCCAAGCAAAACCCGTCCAGACAAGAGGTTACCAAACTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
||
| CDS-3UTR GCA 90 bp | CCATTCTTTTCATGTGTGTATGCCGCCTGTGTGTGGTGTGGACTGTGGGCAAACGTTCTGACCTGCTGCTaGAGTTTGGTAACCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PFFSCVYAACVWCGLWANVLTCC*SLVTSC Trigger: ACAAGAGGTTACCAAACTGCAGCAGCAGGTCAGAAC...GTTTGCCCACAGTCCACACCACACACAGGCGGCATACACACATGAAAAGAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| CDS-3UTR GCA 90 bp | TCTCAAGGTTATAGTCATGAAACAGTACAGCTCTGTCTGATGGGCTGGAGATCACTTGCGTTCCAGCTCTaGCAGCCGTGCGTTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQGYSHETVQLCLMGWRSLAFQL*QPCVLF Trigger: GAACAGAACGCACGGCTGGCAGAGCTGGAACGCAAG...TGATCTCCAGCCCATCAGACAGAGCTGTACTGTTTCATGACTATAACCTTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| CDS-3UTR CCA 90 bp | CCTAACGCCTGGAGACACCCCTTGCCAGTAGTTTATAAAAATAGTTGCTACTGTACCAGTGTGTTGTTTTaGGGCAGGTGGTCCGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PNAWRHPLPVVYKNSCYCTSVLF*GRWSGA Trigger: GGCACCGGACCACCTGCCCCAAAACAACACACTGGT...ACAGTAGCAACTATTTTTATAAACTACTGGCAAGGGGTGTCTCCAGGCGTTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| CDS-3UTR CCA 90 bp | TGTGTAAGTGCTCAGAAAAGCCACTTTATCAGACTAGCTCATGGAAGACTAGAGGGATGGCCCGGGAACTaGAGGAGAGCCCATGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CVSAQKSHFIRLAHGRLEGWPGN*RRAHES Trigger: AGACTCATGGGCTCTCCTCCAGTTCCCGGGCCATCC...CTCTAGTCTTCCATGAGCTAGTCTGATAAAGTGGCTTTTCTGAGCACTTACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR CAA 72 bp | CTCACTGACAGGGGACAGGCACCACGCAGCATTTCTTaGGAGGTTAAAGTGCAGGCTATGAAATGGCATACA | + |
|
Preference number: 4 (lower is better) Translates to: LTDRGQAPRSIS*EVKVQAMKWHT Trigger: TGTATGCCATTTCATAGCCTGCACTTTAACCTCCAAAGAAATGCTGCGTGGTGCCTGTCCCCTGTCAGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| CDS-3UTR TCA 90 bp | TCTCAAGGTTATAGTCATGAAACAGTACAGCTCTGTCTGATGGGCTGGAGATCACTGGAGGAGAGCCCATaGGTCTTCCTGACACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQGYSHETVQLCLMGWRSLEESP*VFLTHL Trigger: CAGATGTGTCAGGAAGACTCATGGGCTCTCCTCCAG...TGATCTCCAGCCCATCAGACAGAGCTGTACTGTTTCATGACTATAACCTTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| CDS-3UTR CCA 90 bp | GACAGGGGACAGGCACCACGCAGCATTTCTTTGGAGGTTAAAGTGCAGGCTATGATCAATCACCTTTCCTaGGATGAAGCAACAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: DRGQAPRSISLEVKVQAMINHLS*DEATEV Trigger: AACCTCTGTTGCTTCATCCCAGGAAAGGTGATTGAT...CATAGCCTGCACTTTAACCTCCAAAGAAATGCTGCGTGGTGCCTGTCCCCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR CAA 72 bp | GTGTGGACTGTGGGCAAACTTAGGCATGGGAATGGTTaGATGCAAACAAAGGAAGATCCTGCCAGGAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: VWTVGKLRHGNG*MQTKEDPARKC Trigger: GCATTTCCTGGCAGGATCTTCCTTTGTTTGCATCAAACCATTCCCATGCCTAAGTTTGCCCACAGTCCACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| CDS-3UTR GCA 90 bp | GACAGCGCAAGACAGGCTTTTCCAGTTACAAGCTCAAAACAGGAGTGCAAACAACCTATGATCTGGGTCTaGTCGAGCAGTTTCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DSARQAFPVTSSKQECKQPMIWV*SSSFWS Trigger: AGACCAGAAACTGCTCGAGCAGACCCAGATCATAGG...TTGTTTGCACTCCTGTTTTGAGCTTGTAACTGGAAAAGCCTGTCTTGCGCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| CDS-3UTR GCA 90 bp | GACAGCGCAAGACAGGCTTTTCCAGTTACAAGCTCAAAACAGGAGTGCAAACAATGTCTGGACGGGTTTTaGTTGGAGAAGAGCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: DSARQAFPVTSSKQECKQCLDGF*LEKSCI Trigger: AATGCAGCTCTTCTCCAAGCAAAACCCGTCCAGACA...TTGTTTGCACTCCTGTTTTGAGCTTGTAACTGGAAAAGCCTGTCTTGCGCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR CAA 72 bp | AAACACGATAGAATGGGCATGGTTAGTACAAATCTATaGCAAGGTAAGACGGGTCTGTGCATCAGCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: KHDRMGMVSTNL*QGKTGLCISST Trigger: GGTGGAGCTGATGCACAGACCCGTCTTACCTTGCAATAGATTTGTACTAACCATGCCCATTCTATCGTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051431.10 ENSMUST00000192544.6 |
||
| 3UTR CAA 72 bp | CCAGTAGCAGCCACTGGCTTTTGTGGACTTAGTGTTTaGTTGATAATTTCCCGAGGACGGGCTCTACATTTA | + |
|
Preference number: 4 (lower is better) Translates to: PVAATGFCGLSV*LIISRGRALHL Trigger: TAAATGTAGAGCCCGTCCTCGGGAAATTATCAACAAAACACTAAGTCCACAAAAGCCAGTGGCTGCTACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| CDS-3UTR TCA 90 bp | CCTAACGCCTGGAGACACCCCTTGCCAGTAGTTTATAAAAATAGTTGCTACTGTGCTTTAACTTGCTTCTaGCACAGGTTATGGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: PNAWRHPLPVVYKNSCYCALTCF*HRLWNL Trigger: GAGGTTCCATAACCTGTGTCAGAAGCAAGTTAAAGC...ACAGTAGCAACTATTTTTATAAACTACTGGCAAGGGGTGTCTCCAGGCGTTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| CDS-3UTR TCA 90 bp | AATTGGAACAATCTTCTCATCAAAGTACTCCATCGCCATGGAGGAGATATCCCGGCTTTAACTTGCTTCTaGCACAGGTTATGGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: NWNNLLIKVLHRHGGDIPALTCF*HRLWNL Trigger: GAGGTTCCATAACCTGTGTCAGAAGCAAGTTAAAGC...CGGGATATCTCCTCCATGGCGATGGAGTACTTTGATGAGAAGATTGTTCCAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192544.6 |
||
| CDS-3UTR GCA 90 bp | CCACGCAGCATTTCTTTGGAGGTTAAAGTGCAGGCTATGAAATGGCATACAAAATGTTTCTGCTGCTCTTaGACTTTGGTGCGAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PRSISLEVKVQAMKWHTKCFCCS*TLVRSS Trigger: TGAGCTTCGCACCAAAGTGCAAGAGCAGCAGAAACA...TTTTGTATGCCATTTCATAGCCTGCACTTTAACCTCCAAAGAAATGCTGCGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| CDS-3UTR CCA 90 bp | CATCACTTCAATACCAAAGTACTAACCGTGTCTCAGACATTCCAGACAAAGGTCAGTACTCCATCGCCATaGAGGAGATATCCCGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: HHFNTKVLTVSQTFQTKVSTPSP*RRYPVT Trigger: AGTTACGGGATATCTCCTCCATGGCGATGGAGTACT...GACCTTTGTCTGGAATGTCTGAGACACGGTTAGTACTTTGGTATTGAAGTGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR CAA 72 bp | GTAGCAGCCACTGGCTTTTGTGGACTTAGTGTTTTGTaGATAATTTCCCGAGGACGGGCTCTACATTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VAATGFCGLSVL*IISRGRALHLS Trigger: ACTTAAATGTAGAGCCCGTCCTCGGGAAATTATCAACAAAACACTAAGTCCACAAAAGCCAGTGGCTGCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR CAA 72 bp | AGCCATATTCCAATCTACTTCCTATTCCGAAGTCGTTaGGATTTCCTAAGAGAGTCTATGGCTTCCGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SHIPIYFLFRSR*DFLRESMASVA Trigger: GGCAACGGAAGCCATAGACTCTCTTAGGAAATCCAAACGACTTCGGAATAGGAAGTAGATTGGAATATGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192544.6 |
||
| 3UTR CAA 72 bp | ATACTACATTGTAGATGGACTTTCAAAGTCAGAGATTaGAACAGAACCCAAGGGCAGGATCACGAAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: ILHCRWTFKVRD*NRTQGQDHEGT Trigger: TGTCCCTTCGTGATCCTGCCCTTGGGTTCTGTTCAAATCTCTGACTTTGAAAGTCCATCTACAATGTAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| CDS-3UTR GCA 90 bp | CAAGCGAGTCATAGCTTTATTCTCAAGGTTATAGTCATGAAACAGTACAGCTCTGCTCTTGCACTTTGGTaGGAAGCTCAGAAATCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QASHSFILKVIVMKQYSSALALW*EAQKSH Trigger: GTGAGATTTCTGAGCTTCGCACCAAAGTGCAAGAGC...AGAGCTGTACTGTTTCATGACTATAACCTTGAGAATAAAGCTATGACTCGCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| CDS-3UTR CCA 90 bp | CAAGCGAGTCATAGCTTTATTCTCAAGGTTATAGTCATGAAACAGTACAGCTCTTGGACGGGTTTTGCTTaGAGAAGAGCTGCATTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QASHSFILKVIVMKQYSSWTGFA*RRAALL Trigger: CAACAATGCAGCTCTTCTCCAAGCAAAACCCGTCCA...AGAGCTGTACTGTTTCATGACTATAACCTTGAGAATAAAGCTATGACTCGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR CAA 72 bp | GGCAAGCCAGTTTTAGCTATTAAAATAGTGCATGATTaGGAGACTCCATATACCACTATGGTCTCCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GKPVLAIKIVHD*ETPYTTMVSQS Trigger: ACTTTGGGAGACCATAGTGGTATATGGAGTCTCCAAATCATGCACTATTTTAATAGCTAAAACTGGCTTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| 3UTR CAA 72 bp | AATATACAACCGGGAGAAAGAACCATTTTATACAATTaGGAGGTTGTTAAAGTGACCATTCAGGAGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: NIQPGERTILYN*EVVKVTIQEAD Trigger: GTCAGCCTCCTGAATGGTCACTTTAACAACCTCCAAATTGTATAAAATGGTTCTTTCTCCCGGTTGTATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| CDS CCA 90 bp | ATGGCTACGATGGGCAGCGCCACCAGTGTGTTGTTTTGGGGCAGGTaGTCCGGTGCCAGCGCGGGCGCGGCGGGTGCCTGGGACCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: MATMGSATSVLFWGR*SGASAGAAGAWDPG Trigger: GCCCGGGTCCCAGGCACCCGCCGCGCCCGCGCTGGCACCGGACCACCTGCCCCAAAACAACACACTGGTGGCGCTGCCCATCGTAGCCAT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000051431.10 ENSMUST00000192544.6 ENSMUST00000194213.2 ENSMUST00000195061.6 |
||
| CDS-3UTR CAA 90 bp | ATTGTTGTCAGGGCTGCGGATGGCCCGGGAACTGGAGGAGAGCCCATGAGTCTTAGCGCCACCAGTGTGTaGTTTTGGGGCAGGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: IVVRAADGPGTGGEPMSLSATSV*FWGRWS Trigger: GGACCACCTGCCCCAAAACAACACACTGGTGGCGCT...AAGACTCATGGGCTCTCCTCCAGTTCCCGGGCCATCCGCAGCCCTGACAACAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000192544.6 ENSMUST00000194213.2 ENSMUST00000195061.6 |
||
| CDS-3UTR CAA 90 bp | GACAGGGCCTGTTCTCCTCCCCTCCTGTCCATTCTTTTCATGTGTGTATGCCGCAGCGCCACCAGTGTGTaGTTTTGGGGCAGGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DRACSPPLLSILFMCVCRSATSV*FWGRWS Trigger: GGACCACCTGCCCCAAAACAACACACTGGTGGCGCT...GCGGCATACACACATGAAAAGAATGGACAGGAGGGGAGGAGAACAGGCCCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
||
| CDS-3UTR CAA 90 bp | CTCTTGCACTTTGGTGCGAAGCTCAGAAATCTCACGCCTGAGGACAGTCACGCCAGCGCCACCAGTGTGTaGTTTTGGGGCAGGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLHFGAKLRNLTPEDSHASATSV*FWGRWS Trigger: GGACCACCTGCCCCAAAACAACACACTGGTGGCGCT...GGCGTGACTGTCCTCAGGCGTGAGATTTCTGAGCTTCGCACCAAAGTGCAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
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| CDS-3UTR CAA 90 bp | TTCTGCTGCTCTTGCACTTTGGTGCGAAGCTCAGAAATCTCACGCCTGAGGACAAGCGCCACCAGTGTGTaGTTTTGGGGCAGGTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: FCCSCTLVRSSEISRLRTSATSV*FWGRWS Trigger: GGACCACCTGCCCCAAAACAACACACTGGTGGCGCT...TGTCCTCAGGCGTGAGATTTCTGAGCTTCGCACCAAAGTGCAAGAGCAGCAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192544.6 ENSMUST00000195061.6 |
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| CDS-3UTR CAA 90 bp | CTGCTCAAAGTGAGAGCAGGAAGTGGCCACCTTCCACCAGTAGCAGCCACTGGCGGGGCTCTGGTAGAATaGACATATCTCAGTACACGG | + |
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Preference number: 5 (lower is better) Translates to: LLKVRAGSGHLPPVAATGGALVE*TYLSTR Trigger: CCGTGTACTGAGATATGTCAATTCTACCAGAGCCCC...GCCAGTGGCTGCTACTGGTGGAAGGTGGCCACTTCCTGCTCTCACTTTGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| CDS-3UTR CAA 90 bp | TTGAGTGAAGGACGGCTGCTCAAAGTGAGAGCAGGAAGTGGCCACCTTCCACCATGGAGAAGAGCTGCATaGTTGTCAGGGCTGCGGATG | + |
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Preference number: 5 (lower is better) Translates to: LSEGRLLKVRAGSGHLPPWRRAA*LSGLRM Trigger: CATCCGCAGCCCTGACAACAATGCAGCTCTTCTCCA...TGGTGGAAGGTGGCCACTTCCTGCTCTCACTTTGAGCAGCCGTCCTTCACTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| CDS-3UTR CAA 90 bp | CTGCTCAAAGTGAGAGCAGGAAGTGGCCACCTTCCACCAGTAGCAGCCACTGGCCTGGACGGGTTTTGCTaGGAGAAGAGCTGCATTGTT | + |
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Preference number: 5 (lower is better) Translates to: LLKVRAGSGHLPPVAATGLDGFC*EKSCIV Trigger: AACAATGCAGCTCTTCTCCAAGCAAAACCCGTCCAG...GCCAGTGGCTGCTACTGGTGGAAGGTGGCCACTTCCTGCTCTCACTTTGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| CDS-3UTR CAA 90 bp | CTGCTCAAAGTGAGAGCAGGAAGTGGCCACCTTCCACCAGTAGCAGCCACTGGCTTGTCTGGACGGGTTTaGCTTGGAGAAGAGCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: LLKVRAGSGHLPPVAATGLSGRV*LGEELH Trigger: ATGCAGCTCTTCTCCAAGCAAAACCCGTCCAGACAA...GCCAGTGGCTGCTACTGGTGGAAGGTGGCCACTTCCTGCTCTCACTTTGAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| CDS-3UTR CAA 90 bp | GACAGCGCAAGACAGGCTTTTCCAGTTACAAGCTCAAAACAGGAGTGCAAACAAGTCACGCCAGCGCCGTaGGTTCTGACCTGCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: DSARQAFPVTSSKQECKQVTPAP*VLTCCC Trigger: GCAGCAGCAGGTCAGAACCAACGGCGCTGGCGTGAC...TTGTTTGCACTCCTGTTTTGAGCTTGTAACTGGAAAAGCCTGTCTTGCGCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| CDS-3UTR CAA 90 bp | CTGCTCAAAGTGAGAGCAGGAAGTGGCCACCTTCCACCAGTAGCAGCCACTGGCGAGCAGTTTCTGGTCTaGGTCTTGAAGCTGTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: LLKVRAGSGHLPPVAATGEQFLV*VLKLFL Trigger: CAGAAACAGCTTCAAGACCAAGACCAGAAACTGCTC...GCCAGTGGCTGCTACTGGTGGAAGGTGGCCACTTCCTGCTCTCACTTTGAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| CDS-3UTR CAA 90 bp | TTGCAAGGTAAGACGGGTCTGTGCATCAGCTCCACCAGAGAAGCGCAAAGGATGAGTCTATGGCTTCCGTaGCCTTCCGTCGTTTCCGAG | + |
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Preference number: 5 (lower is better) Translates to: LQGKTGLCISSTREAQRMSLWLP*PSVVSE Trigger: CTCGGAAACGACGGAAGGCAACGGAAGCCATAGACT...CATCCTTTGCGCTTCTCTGGTGGAGCTGATGCACAGACCCGTCTTACCTTGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| CDS-3UTR CAA 90 bp | ACCATGTTGCTCCGATATCCTGACAGGAGTAACTGCTTAAACTCTCAGCCACGGCTGTTTCTGCTGCTCTaGCACTTTGGTGCGAAGCTC | + |
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Preference number: 5 (lower is better) Translates to: TMLLRYPDRSNCLNSQPRLFLLL*HFGAKL Trigger: GAGCTTCGCACCAAAGTGCAAGAGCAGCAGAAACAG...CCGTGGCTGAGAGTTTAAGCAGTTACTCCTGTCAGGATATCGGAGCAACATGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| CDS TCA 90 bp | TTCAACAGTGACAACCTCGTTTCCACAGCGGCAAGGATGTCTGCATaGCGAGCTAAAGAATGGTTTCTTCTTTCTGACTCTCTCCTCGGT | + |
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Preference number: 5 (lower is better) Translates to: FNSDNLVSTAARMSA*RAKEWFLLSDSLLG Trigger: ACCGAGGAGAGAGTCAGAAAGAAGAAACCATTCTTTAGCTCGTCATGCAGACATCCTTGCCGCTGTGGAAACGAGGTTGTCACTGTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051431.10 ENSMUST00000194213.2 |
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| CDS TCA 90 bp | ACAGAGGTTGGAATCCACATACTTCATGAAGGTCATATTCAACAGTaGCAACCTCGTTTCCACAGCGGCAAGGATGTCTGCATGACGAGC | + |
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Preference number: 5 (lower is better) Translates to: TEVGIHILHEGHIQQ*QPRFHSGKDVCMTS Trigger: GCTCGTCATGCAGACATCCTTGCCGCTGTGGAAACGAGGTTGTCACTGTTGAATATGACCTTCATGAAGTATGTGGATTCCAACCTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051431.10 ENSMUST00000194213.2 |
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| CDS-3UTR CAA 90 bp | GGGAAATTGGGAAAGGCCAACCTCACTCAAGCGTGCCTTAGTTTCGATTTGAGTCAGTTTGGTAACCTCTaGTCTGGACGGGTTTTGCTT | + |
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Preference number: 5 (lower is better) Translates to: GKLGKANLTQACLSFDLSQFGNL*SGRVLL Trigger: AAGCAAAACCCGTCCAGACAAGAGGTTACCAAACTG...ACTCAAATCGAAACTAAGGCACGCTTGAGTGAGGTTGGCCTTTCCCAATTTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| CDS-3UTR CAA 90 bp | ATGGTTAGTACAAATCTATTGCAAGGTAAGACGGGTCTGTGCATCAGCTCCACCTGCTGCTCTTGCACTTaGGTGCGAAGCTCAGAAATC | + |
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Preference number: 5 (lower is better) Translates to: MVSTNLLQGKTGLCISSTCCSCT*VRSSEI Trigger: GATTTCTGAGCTTCGCACCAAAGTGCAAGAGCAGCA...GGTGGAGCTGATGCACAGACCCGTCTTACCTTGCAATAGATTTGTACTAACCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| CDS-3UTR CAA 90 bp | ACCATGTTGCTCCGATATCCTGACAGGAGTAACTGCTTAAACTCTCAGCCACGGATGAAGCAACAGAGGTaGGAATCCACATACTTCATG | + |
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Preference number: 5 (lower is better) Translates to: TMLLRYPDRSNCLNSQPRMKQQR*ESTYFM Trigger: CATGAAGTATGTGGATTCCAACCTCTGTTGCTTCAT...CCGTGGCTGAGAGTTTAAGCAGTTACTCCTGTCAGGATATCGGAGCAACATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| CDS-3UTR CAA 90 bp | ACCATGTTGCTCCGATATCCTGACAGGAGTAACTGCTTAAACTCTCAGCCACGGCTATTCCGAAGTCGTTaGGATTTCCTAAGAGAGTCT | + |
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Preference number: 5 (lower is better) Translates to: TMLLRYPDRSNCLNSQPRLFRSR*DFLRES Trigger: AGACTCTCTTAGGAAATCCAAACGACTTCGGAATAG...CCGTGGCTGAGAGTTTAAGCAGTTACTCCTGTCAGGATATCGGAGCAACATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051431.10 |
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| CDS CAA 72 bp | TTCTCGATGGCTACGATGGGCAGCGCCACCAGTGTGTaGTTTTGGGGCAGGTGGTCCGGTGCCAGCGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: FSMATMGSATSV*FWGRWSGASAG Trigger: GCCCGCGCTGGCACCGGACCACCTGCCCCAAAACAACACACTGGTGGCGCTGCCCATCGTAGCCATCGAGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000051431.10 ENSMUST00000192544.6 ENSMUST00000194213.2 ENSMUST00000195061.6 |
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| CDS CCA 72 bp | TTGGAACAATCTTCTCATCAAAGTACTCCATCGCCATaGAGGAGATATCCCGTAACTCCTGCAGCACCTCGG | + |
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Preference number: 6 (lower is better) Translates to: LEQSSHQSTPSP*RRYPVTPAAPR Trigger: CCGAGGTGCTGCAGGAGTTACGGGATATCTCCTCCATGGCGATGGAGTACTTTGATGAGAAGATTGTTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195061.6 |
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| CDS TCA 72 bp | GACAACCTCGTTTCCACAGCGGCAAGGATGTCTGCATaGCGAGCTAAAGAATGGTTTCTTCTTTCTGACTCT | + |
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Preference number: 6 (lower is better) Translates to: DNLVSTAARMSA*RAKEWFLLSDS Trigger: AGAGTCAGAAAGAAGAAACCATTCTTTAGCTCGTCATGCAGACATCCTTGCCGCTGTGGAAACGAGGTTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051431.10 ENSMUST00000194213.2 |
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| CDS TCA 72 bp | GGAATCCACATACTTCATGAAGGTCATATTCAACAGTaGCAACCTCGTTTCCACAGCGGCAAGGATGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: GIHILHEGHIQQ*QPRFHSGKDVC Trigger: GCAGACATCCTTGCCGCTGTGGAAACGAGGTTGTCACTGTTGAATATGACCTTCATGAAGTATGTGGATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051431.10 ENSMUST00000194213.2 |
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