Pregenerated sensors for FBXO27 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037463Ensembl transcript IDs: ENSMUST00000039998.11, ENSMUST00000108280.2, ENSMUST00000108281.8, ENSMUST00000127368.2, ENSMUST00000151227.2
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAACCCTGGGCTCATCCCCAGCACTGCACAAGACTGAGTGGTACTaGTGTGTGCCTGTAGTCCCAGCACATGAGTGTCAAAGGCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: ETLGSSPALHKTEWY*CVPVVPAHECQRQK Trigger: TTTCTGCCTTTGACACTCATGTGCTGGGACTACAGGCACACACCAGTACCACTCAGTCTTGTGCAGTGCTGGGGATGAGCCCAGGGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR CCA 90 bp | ATGCATGAAACCCTGGGCTCATCCCCAGCACTGCACAAGACTGAGTaGTACTGGTGTGTGCCTGTAGTCCCAGCACATGAGTGTCAAAGG | + |
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Preference number: 1 (lower is better) Translates to: MHETLGSSPALHKTE*YWCVPVVPAHECQR Trigger: CCTTTGACACTCATGTGCTGGGACTACAGGCACACACCAGTACCACTCAGTCTTGTGCAGTGCTGGGGATGAGCCCAGGGTTTCATGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR GCA 90 bp | CCTGAGGCAGAAACAGGACATGACCAGAGGGGACACTGGGGACATTaGTCAGATAGTAGAATGTTTGCTGGCATGCATGAAACCCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: PEAETGHDQRGHWGH*SDSRMFAGMHETLG Trigger: GCCCAGGGTTTCATGCATGCCAGCAAACATTCTACTATCTGAGCAATGTCCCCAGTGTCCCCTCTGGTCATGTCCTGTTTCTGCCTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR GCA 90 bp | ATCCATGCATCCGGGCACACATGCATCCAGGCACCTAGGCACTCATaGTCTAAAGCAGCAGTAATAGGTAGATCTGATGGAGGGCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: IHASGHTCIQAPRHS*SKAAVIGRSDGGLQ Trigger: TTGAAGCCCTCCATCAGATCTACCTATTACTGCTGCTTTAGAGCATGAGTGCCTAGGTGCCTGGATGCATGTGTGCCCGGATGCATGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR GCA 90 bp | GTACACATCCGCAATTATTCCCAGCATTTGGGAGACAGAAGTGAGTaGCAGGAGCGCAAGGCTAGCCTCAGCTACACAGTGAGTCTAAGA | + |
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Preference number: 1 (lower is better) Translates to: VHIRNYSQHLGDRSE*QERKASLSYTVSLR Trigger: TCTTAGACTCACTGTGTAGCTGAGGCTAGCCTTGCGCTCCTGGCACTCACTTCTGTCTCCCAAATGCTGGGAATAATTGCGGATGTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127368.2 |
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| 3UTR CCA 90 bp | GACATTGCTCAGATAGTAGAATGTTTGCTGGCATGCATGAAACCCTaGGCTCATCCCCAGCACTGCACAAGACTGAGTGGTACTGGTGTG | + |
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Preference number: 1 (lower is better) Translates to: DIAQIVECLLACMKP*AHPQHCTRLSGTGV Trigger: CACACCAGTACCACTCAGTCTTGTGCAGTGCTGGGGATGAGCCCAGGGTTTCATGCATGCCAGCAAACATTCTACTATCTGAGCAATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR TCA 90 bp | GCAGTAATAGGTAGATCTGATGGAGGGCTTCAATGTTACAGACTCTaGAAACAAGACCAAGCAGGACCCTTCACTGGATCCCAGAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: AVIGRSDGGLQCYRL*KQDQAGPFTGSQSF Trigger: GAAACTCTGGGATCCAGTGAAGGGTCCTGCTTGGTCTTGTTTTCAGAGTCTGTAACATTGAAGCCCTCCATCAGATCTACCTATTACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGAGGCTGGCTATAGCCAAGAGAGCTTTGGTTCCTTACCCAAGGGAGCTGGAGGCAGAAACAGGACATaGCCAGAGGGGACACTGGGG | + |
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Preference number: 2 (lower is better) Translates to: EEAGYSQESFGSLPKGAGGRNRT*PEGTLG Trigger: CCCCAGTGTCCCCTCTGGTCATGTCCTGTTTCTGCC...TCCAGCTCCCTTGGGTAAGGAACCAAAGCTCTCTTGGCTATAGCCAGCCTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR-3UTR CCA 90 bp | AACCCAGGCATCCATGCATCCGGGCACACATGCATCCAGGCACCTAGGCACTCAAGCAGGACCCTTCACTaGATCCCAGAGTTTCATGTG | + |
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Preference number: 2 (lower is better) Translates to: NPGIHASGHTCIQAPRHSSRTLH*IPEFHV Trigger: CACATGAAACTCTGGGATCCAGTGAAGGGTCCTGCT...TGAGTGCCTAGGTGCCTGGATGCATGTGTGCCCGGATGCATGGATGCCTGGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR-3UTR TCA 90 bp | CATGCATCCATGCATCCGGGCACCCAGGCATCCATGCATCCAGGCACCCAGGCACAATGTTACAGACTCTaGAAACAAGACCAAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: HASMHPGTQASMHPGTQAQCYRL*KQDQAG Trigger: TCCTGCTTGGTCTTGTTTTCAGAGTCTGTAACATTG...TGCCTGGGTGCCTGGATGCATGGATGCCTGGGTGCCCGGATGCATGGATGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR-3UTR GCA 90 bp | GACATGACCAGAGGGGACACTGGGGACATTGCTCAGATAGTAGAATGTTTGCTGGCACCCAGGCATCCATaGATCCAGGCACCCAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: DMTRGDTGDIAQIVECLLAPRHP*IQAPRH Trigger: ATGCCTGGGTGCCTGGATGCATGGATGCCTGGGTGC...CAGCAAACATTCTACTATCTGAGCAATGTCCCCAGTGTCCCCTCTGGTCATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGACATGACCAGAGGGGACACTGGGGACATTGCTCAGATAGTAGAATGTTTGGCACCCAGGCATCCATaGATCCAGGCACCCAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: QDMTRGDTGDIAQIVECLAPRHP*IQAPRH Trigger: ATGCCTGGGTGCCTGGATGCATGGATGCCTGGGTGC...CAAACATTCTACTATCTGAGCAATGTCCCCAGTGTCCCCTCTGGTCATGTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGAGGCTGGCTATAGCCAAGAGAGCTTTGGTTCCTTACCCAAGGGAGCTGGATGTAGTCCCAGCACATaGGTGTCAAAGGCAGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: EEAGYSQESFGSLPKGAGCSPST*VSKAER Trigger: CCTTTCTGCCTTTGACACTCATGTGCTGGGACTACA...TCCAGCTCCCTTGGGTAAGGAACCAAAGCTCTCTTGGCTATAGCCAGCCTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR-3UTR CCA 90 bp | GACATGACCAGAGGGGACACTGGGGACATTGCTCAGATAGTAGAATGTTTGCTGGCATGCATGAAACCCTaGGCTCATCCCCAGCACTGC | + |
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Preference number: 2 (lower is better) Translates to: DMTRGDTGDIAQIVECLLACMKP*AHPQHC Trigger: GCAGTGCTGGGGATGAGCCCAGGGTTTCATGCATGC...CAGCAAACATTCTACTATCTGAGCAATGTCCCCAGTGTCCCCTCTGGTCATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR-3UTR TCA 90 bp | AACCCAGGCATCCATGCATCCGGGCACACATGCATCCAGGCACCTAGGCACTCACAATGTTACAGACTCTaGAAACAAGACCAAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: NPGIHASGHTCIQAPRHSQCYRL*KQDQAG Trigger: TCCTGCTTGGTCTTGTTTTCAGAGTCTGTAACATTG...TGAGTGCCTAGGTGCCTGGATGCATGTGTGCCCGGATGCATGGATGCCTGGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR-3UTR GCA 90 bp | GGGCACCCAGGCATCCATGCATCCAGGCACCCAGGCATCTATGCATCTAGGAACACATTCAGATTGTCTTaGCAAAATGGCGGCCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: GHPGIHASRHPGIYASRNTFRLS*QNGGLL Trigger: CAAAAGGCCGCCATTTTGGCAAGACAATCTGAATGT...GTTCCTAGATGCATAGATGCCTGGGTGCCTGGATGCATGGATGCCTGGGTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTGTGTGCCTGTAGTCCCAGCACATGAGTGTCAAAGGCAGAAAGGAGGGTTGAGCAGGACCCTTCACTaGATCCCAGAGTTTCATGTG | + |
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Preference number: 2 (lower is better) Translates to: WCVPVVPAHECQRQKGGLSRTLH*IPEFHV Trigger: CACATGAAACTCTGGGATCCAGTGAAGGGTCCTGCT...CAACCCTCCTTTCTGCCTTTGACACTCATGTGCTGGGACTACAGGCACACACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR-3UTR TCA 90 bp | TTACCCAAGGGAGCTGGAATTCTGCTAGCCATAAATCCTATGTTCAGCCCTAAGGTTTGCTGGCATGCATaGAACCCTGGGCTCATCCCC | + |
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Preference number: 2 (lower is better) Translates to: LPKGAGILLAINPMFSPKVCWHA*NPGLIP Trigger: GGGGATGAGCCCAGGGTTTCATGCATGCCAGCAAAC...CTTAGGGCTGAACATAGGATTTATGGCTAGCAGAATTCCAGCTCCCTTGGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR-3UTR GCA 90 bp | CGCAATTATTCCCAGCATTTGGGAGACAGAAGTGAGTGCCAGGAGCGCAAGGCTTGGAAGAAGTCTCTCTaGCCTGTGACAGCCATAAAG | + |
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Preference number: 2 (lower is better) Translates to: RNYSQHLGDRSECQERKAWKKSL*PVTAIK Trigger: CTTTATGGCTGTCACAGGGCAGAGAGACTTCTTCCA...AGCCTTGCGCTCCTGGCACTCACTTCTGTCTCCCAAATGCTGGGAATAATTGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127368.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGACATGACCAGAGGGGACACTGGGGACATTGCTCAGATAGTAGAATGTTTGTGTAGTCCCAGCACATaGGTGTCAAAGGCAGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: QDMTRGDTGDIAQIVECLCSPST*VSKAER Trigger: CCTTTCTGCCTTTGACACTCATGTGCTGGGACTACA...CAAACATTCTACTATCTGAGCAATGTCCCCAGTGTCCCCTCTGGTCATGTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR-3UTR GCA 90 bp | TGGTGTGTGCCTGTAGTCCCAGCACATGAGTGTCAAAGGCAGAAAGGAGGGTTGGCACCTAGGCACTCATaGTCTAAAGCAGCAGTAATA | + |
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Preference number: 2 (lower is better) Translates to: WCVPVVPAHECQRQKGGLAPRHS*SKAAVI Trigger: TATTACTGCTGCTTTAGAGCATGAGTGCCTAGGTGC...CAACCCTCCTTTCTGCCTTTGACACTCATGTGCTGGGACTACAGGCACACACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGGCTGGCTATAGCCAAGAGAGCTTTGGTTCCTTACCCAAGGGAGCTGGAGGACACTGGGGACATTaGTCAGATAGTAGAATGTTT | + |
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Preference number: 2 (lower is better) Translates to: EEAGYSQESFGSLPKGAGGHWGH*SDSRMF Trigger: AAACATTCTACTATCTGAGCAATGTCCCCAGTGTCC...TCCAGCTCCCTTGGGTAAGGAACCAAAGCTCTCTTGGCTATAGCCAGCCTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR-3UTR CCA 90 bp | GACATGACCAGAGGGGACACTGGGGACATTGCTCAGATAGTAGAATGTTTGCTGAGCAGGACCCTTCACTaGATCCCAGAGTTTCATGTG | + |
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Preference number: 2 (lower is better) Translates to: DMTRGDTGDIAQIVECLLSRTLH*IPEFHV Trigger: CACATGAAACTCTGGGATCCAGTGAAGGGTCCTGCT...CAGCAAACATTCTACTATCTGAGCAATGTCCCCAGTGTCCCCTCTGGTCATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR-3UTR GCA 90 bp | TGGTGTGTGCCTGTAGTCCCAGCACATGAGTGTCAAAGGCAGAAAGGAGGGTTGACATTCAGATTGTCTTaGCAAAATGGCGGCCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: WCVPVVPAHECQRQKGGLTFRLS*QNGGLL Trigger: CAAAAGGCCGCCATTTTGGCAAGACAATCTGAATGT...CAACCCTCCTTTCTGCCTTTGACACTCATGTGCTGGGACTACAGGCACACACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGGACATGACCAGAGGGGACACTGGGGACATTGCTCAGATAGTAGAATGTTTAAGACTGAGTGGTACTaGTGTGTGCCTGTAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: TGHDQRGHWGHCSDSRMFKTEWY*CVPVVP Trigger: TGGGACTACAGGCACACACCAGTACCACTCAGTCTT...AAACATTCTACTATCTGAGCAATGTCCCCAGTGTCCCCTCTGGTCATGTCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR-3UTR GCA 90 bp | GGCCTGGACTCTAGGCACTTCCCAATTGTTTGGAGAAAATCTGTGGGCAGATACGCACCTAGGCACTCATaGTCTAAAGCAGCAGTAATA | + |
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Preference number: 2 (lower is better) Translates to: GLDSRHFPIVWRKSVGRYAPRHS*SKAAVI Trigger: TATTACTGCTGCTTTAGAGCATGAGTGCCTAGGTGC...GTATCTGCCCACAGATTTTCTCCAAACAATTGGGAAGTGCCTAGAGTCCAGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR-3UTR GCA 90 bp | TTGATGATCGGGGCCTGGACTCTAGGCACTTCCCAATTGTTTGGAGAAAATCTGGAATGTTTGCTGGCATaGATGAAACCCTGGGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: LMIGAWTLGTSQLFGENLECLLA*MKPWAH Trigger: ATGAGCCCAGGGTTTCATGCATGCCAGCAAACATTC...CAGATTTTCTCCAAACAATTGGGAAGTGCCTAGAGTCCAGGCCCCGATCATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR-3UTR TCA 90 bp | GACATGACCAGAGGGGACACTGGGGACATTGCTCAGATAGTAGAATGTTTGCTGCAATGTTACAGACTCTaGAAACAAGACCAAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: DMTRGDTGDIAQIVECLLQCYRL*KQDQAG Trigger: TCCTGCTTGGTCTTGTTTTCAGAGTCTGTAACATTG...CAGCAAACATTCTACTATCTGAGCAATGTCCCCAGTGTCCCCTCTGGTCATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR-3UTR GCA 90 bp | TCAATGTTACAGACTCTGAAAACAAGACCAAGCAGGACCCTTCACTGGATCCCAACATTCAGATTGTCTTaGCAAAATGGCGGCCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: SMLQTLKTRPSRTLHWIPTFRLS*QNGGLL Trigger: CAAAAGGCCGCCATTTTGGCAAGACAATCTGAATGT...TGGGATCCAGTGAAGGGTCCTGCTTGGTCTTGTTTTCAGAGTCTGTAACATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR GCA 72 bp | TTGAGACCAGCATGCACCCATGCATCCGGGCACCCATaGATCCATGCATCCGGGCACCCAGGCATCCATGCA | + |
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Preference number: 3 (lower is better) Translates to: LRPACTHASGHP*IHASGHPGIHA Trigger: TGCATGGATGCCTGGGTGCCCGGATGCATGGATGCATGGGTGCCCGGATGCATGGGTGCATGCTGGTCTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR-3UTR CAA 90 bp | CACCCATGCATCCATGCATCCGGGCACCCAGGCATCCATGCATCCAGGCACCCAAGGGAGGTACAGTACTaGACTCATGAGGGATTCCAG | + |
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Preference number: 3 (lower is better) Translates to: HPCIHASGHPGIHASRHPREVQY*THEGFQ Trigger: CTGGAATCCCTCATGAGTCAAGTACTGTACCTCCCT...TGGGTGCCTGGATGCATGGATGCCTGGGTGCCCGGATGCATGGATGCATGGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR CCA 72 bp | ACCCTGGGCTCATCCCCAGCACTGCACAAGACTGAGTaGTACTGGTGTGTGCCTGTAGTCCCAGCACATGAG | + |
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Preference number: 3 (lower is better) Translates to: TLGSSPALHKTE*YWCVPVVPAHE Trigger: CTCATGTGCTGGGACTACAGGCACACACCAGTACCACTCAGTCTTGTGCAGTGCTGGGGATGAGCCCAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR-3UTR CAA 90 bp | ATCGGGGCCTGGACTCTAGGCACTTCCCAATTGTTTGGAGAAAATCTGTGGGCAAGGCAGAAAGGAGGGTaGTCGCCAGCTGGGATGCCC | + |
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Preference number: 3 (lower is better) Translates to: IGAWTLGTSQLFGENLWARQKGG*SPAGMP Trigger: GGGCATCCCAGCTGGCGACAACCCTCCTTTCTGCCT...TGCCCACAGATTTTCTCCAAACAATTGGGAAGTGCCTAGAGTCCAGGCCCCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR CCA 72 bp | GGCTCATCCCCAGCACTGCACAAGACTGAGTGGTACTaGTGTGTGCCTGTAGTCCCAGCACATGAGTGTCAA | + |
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Preference number: 3 (lower is better) Translates to: GSSPALHKTEWY*CVPVVPAHECQ Trigger: TTGACACTCATGTGCTGGGACTACAGGCACACACCAGTACCACTCAGTCTTGTGCAGTGCTGGGGATGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR GCA 72 bp | CGCAATTATTCCCAGCATTTGGGAGACAGAAGTGAGTaGCAGGAGCGCAAGGCTAGCCTCAGCTACACAGTG | + |
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Preference number: 3 (lower is better) Translates to: RNYSQHLGDRSE*QERKASLSYTV Trigger: CACTGTGTAGCTGAGGCTAGCCTTGCGCTCCTGGCACTCACTTCTGTCTCCCAAATGCTGGGAATAATTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127368.2 |
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| 3UTR-3UTR CAA 90 bp | GAGGAGGCTGGCTATAGCCAAGAGAGCTTTGGTTCCTTACCCAAGGGAGCTGGAGAAGGCACATTCAGATaGTCTTGCCAAAATGGCGGC | + |
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Preference number: 3 (lower is better) Translates to: EEAGYSQESFGSLPKGAGEGTFR*SCQNGG Trigger: GCCGCCATTTTGGCAAGACAATCTGAATGTGCCTTC...TCCAGCTCCCTTGGGTAAGGAACCAAAGCTCTCTTGGCTATAGCCAGCCTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR-3UTR CAA 90 bp | TCCATGCATCCGGGCACACATGCATCCAGGCACCTAGGCACTCATGCTCTAAAGAGGGAGGTACAGTACTaGACTCATGAGGGATTCCAG | + |
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Preference number: 3 (lower is better) Translates to: SMHPGTHASRHLGTHALKREVQY*THEGFQ Trigger: CTGGAATCCCTCATGAGTCAAGTACTGTACCTCCCT...CTTTAGAGCATGAGTGCCTAGGTGCCTGGATGCATGTGTGCCCGGATGCATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR CCA 72 bp | CCTGAGGCAGAAACAGGACATGACCAGAGGGGACACTaGGGACATTGCTCAGATAGTAGAATGTTTGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: PEAETGHDQRGH*GHCSDSRMFAG Trigger: GCCAGCAAACATTCTACTATCTGAGCAATGTCCCCAGTGTCCCCTCTGGTCATGTCCTGTTTCTGCCTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR GCA 72 bp | TCCGGGCACACATGCATCCAGGCACCTAGGCACTCATaGTCTAAAGCAGCAGTAATAGGTAGATCTGATGGA | + |
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Preference number: 3 (lower is better) Translates to: SGHTCIQAPRHS*SKAAVIGRSDG Trigger: TCCATCAGATCTACCTATTACTGCTGCTTTAGAGCATGAGTGCCTAGGTGCCTGGATGCATGTGTGCCCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR CCA 72 bp | CAGACTCTGAAAACAAGACCAAGCAGGACCCTTCACTaGATCCCAGAGTTTCATGTGCCAGGGAGGTACAGT | + |
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Preference number: 3 (lower is better) Translates to: QTLKTRPSRTLH*IPEFHVPGRYS Trigger: ACTGTACCTCCCTGGCACATGAAACTCTGGGATCCAGTGAAGGGTCCTGCTTGGTCTTGTTTTCAGAGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR-3UTR CAA 90 bp | CTGAAAACAAGACCAAGCAGGACCCTTCACTGGATCCCAGAGTTTCATGTGCCAGAAGGCACATTCAGATaGTCTTGCCAAAATGGCGGC | + |
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Preference number: 3 (lower is better) Translates to: LKTRPSRTLHWIPEFHVPEGTFR*SCQNGG Trigger: GCCGCCATTTTGGCAAGACAATCTGAATGTGCCTTC...TGGCACATGAAACTCTGGGATCCAGTGAAGGGTCCTGCTTGGTCTTGTTTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR CCA 72 bp | ACTCTAGGCACTTCCCAATTGTTTGGAGAAAATCTGTaGGCAGATACCCTAAAACACCCTTCAATGAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: TLGTSQLFGENL*ADTLKHPSMRR Trigger: CCTCCTCATTGAAGGGTGTTTTAGGGTATCTGCCCACAGATTTTCTCCAAACAATTGGGAAGTGCCTAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| 3UTR CCA 72 bp | AAAGAGGTTTTATCACCAAGAATGTGGCAGAAATTCTaGGTGGGGCTGTACACATCCGCAATTATTCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: KEVLSPRMWQKF*VGLYTSAIIPS Trigger: GCTGGGAATAATTGCGGATGTGTACAGCCCCACCCAGAATTTCTGCCACATTCTTGGTGATAAAACCTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127368.2 |
||
| CDS-3UTR CCA 90 bp | CCATGCATCCATGCATCCGGGCACCCAGGCATCCATGCATCCAGGCACCCAGGCGTGCGCGGGGGCACGTaGCTCAGTACCAGCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PCIHASGHPGIHASRHPGVRGGT*LSTSRS Trigger: GCTCCTGCTGGTACTGAGCCACGTGCCCCCGCGCAC...GCCTGGGTGCCTGGATGCATGGATGCCTGGGTGCCCGGATGCATGGATGCATGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039998.11 ENSMUST00000108281.8 |
||
| CDS-3UTR GCA 90 bp | GGGCACCCATGCATCCATGCATCCGGGCACCCAGGCATCCATGCATCCAGGCACAGTGCATCAGCAGCGTaGGCGGGGGCACGTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GHPCIHASGHPGIHASRHSASAA*AGARGS Trigger: TGAGCCACGTGCCCCCGCGCACGCTGCTGATGCACT...GTGCCTGGATGCATGGATGCCTGGGTGCCCGGATGCATGGATGCATGGGTGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039998.11 ENSMUST00000108281.8 |
||
| CDS-3UTR GCA 90 bp | CATGCATCCATGCATCCGGGCACCCAGGCATCCATGCATCCAGGCACCCAGGCAGCCGCACCATCCATTTaGGCAGGCCTTGGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: HASMHPGTQASMHPGTQAAAPSI*AGLGHR Trigger: CCTGTGGCCAAGGCCTGCGCAAATGGATGGTGCGGC...TGCCTGGGTGCCTGGATGCATGGATGCCTGGGTGCCCGGATGCATGGATGCATG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039998.11 |
||
| CDS-3UTR CCA 90 bp | ACCAAGCAGGACCCTTCACTGGATCCCAGAGTTTCATGTGCCAGGGAGGTACAGAGGTCCAGGACCTCCTaGGGGTCGGGCTCCGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: TKQDPSLDPRVSCAREVQRSRTS*GSGSGV Trigger: GACGCCGGAGCCCGACCCCCAGGAGGTCCTGGACCT...CTGTACCTCCCTGGCACATGAAACTCTGGGATCCAGTGAAGGGTCCTGCTTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039998.11 ENSMUST00000108281.8 |
||
| CDS-3UTR CCA 90 bp | TGGTGTGTGCCTGTAGTCCCAGCACATGAGTGTCAAAGGCAGAAAGGAGGGTTGCGGCCCGCTGCGCTGTaGTCACGGGCCAGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WCVPVVPAHECQRQKGGLRPAAL*SRASSS Trigger: GCTGCTGCTGGCCCGTGACCACAGCGCAGCGGGCCG...CAACCCTCCTTTCTGCCTTTGACACTCATGTGCTGGGACTACAGGCACACACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039998.11 ENSMUST00000108281.8 |
||
| CDS-3UTR CCA 90 bp | CTGCACAAGACTGAGTGGTACTGGTGTGTGCCTGTAGTCCCAGCACATGAGTGTAGGTCCAGGACCTCCTaGGGGTCGGGCTCCGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LHKTEWYWCVPVVPAHECRSRTS*GSGSGV Trigger: GACGCCGGAGCCCGACCCCCAGGAGGTCCTGGACCT...ACACTCATGTGCTGGGACTACAGGCACACACCAGTACCACTCAGTCTTGTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039998.11 ENSMUST00000108281.8 |
||
| CDS-3UTR CCA 90 bp | TCCCCAGCACTGCACAAGACTGAGTGGTACTGGTGTGTGCCTGTAGTCCCAGCATGGAGTTCGTCACTCTaGCCCCATAGTGGCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SPALHKTEWYWCVPVVPAWSSSL*PHSGQP Trigger: GGGCTGGCCACTATGGGGCCAGAGTGACGAACTCCA...TGCTGGGACTACAGGCACACACCAGTACCACTCAGTCTTGTGCAGTGCTGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
||
| CDS-3UTR TCA 90 bp | CATGCATCCATGCATCCGGGCACCCAGGCATCCATGCATCCAGGCACCCAGGCAGGGCATCAAGAAGCGTaGCAAAGAGACGGTACTTAC | + |
|
Preference number: 4 (lower is better) Translates to: HASMHPGTQASMHPGTQAGHQEA*QRDGTY Trigger: GTAAGTACCGTCTCTTTGTCACGCTTCTTGATGCCC...TGCCTGGGTGCCTGGATGCATGGATGCCTGGGTGCCCGGATGCATGGATGCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
||
| CDS-3UTR GCA 90 bp | ATCGGGGCCTGGACTCTAGGCACTTCCCAATTGTTTGGAGAAAATCTGTGGGCAAGTGCATCAGCAGCGTaGGCGGGGGCACGTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IGAWTLGTSQLFGENLWASASAA*AGARGS Trigger: TGAGCCACGTGCCCCCGCGCACGCTGCTGATGCACT...TGCCCACAGATTTTCTCCAAACAATTGGGAAGTGCCTAGAGTCCAGGCCCCGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039998.11 ENSMUST00000108281.8 |
||
| CDS-3UTR CCA 90 bp | GACATGACCAGAGGGGACACTGGGGACATTGCTCAGATAGTAGAATGTTTGCTGGTGCGCGGGGGCACGTaGCTCAGTACCAGCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DMTRGDTGDIAQIVECLLVRGGT*LSTSRS Trigger: GCTCCTGCTGGTACTGAGCCACGTGCCCCCGCGCAC...CAGCAAACATTCTACTATCTGAGCAATGTCCCCAGTGTCCCCTCTGGTCATGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039998.11 ENSMUST00000108281.8 |
||
| CDS-3UTR CCA 90 bp | TCCCCAGCACTGCACAAGACTGAGTGGTACTGGTGTGTGCCTGTAGTCCCAGCATTGCGCAGGCCTTCTTaGCCACAGGGGTTGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SPALHKTEWYWCVPVVPALRRPS*PQGLLM Trigger: CATCAGCAACCCCTGTGGCCAAGAAGGCCTGCGCAA...TGCTGGGACTACAGGCACACACCAGTACCACTCAGTCTTGTGCAGTGCTGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108281.8 |
||
| CDS-3UTR TCA 90 bp | GGCATGCATGAAACCCTGGGCTCATCCCCAGCACTGCACAAGACTGAGTGGTACCGGAGAACACGTGGGTaGCCTGCAGGTAGATATCAT | + |
|
Preference number: 4 (lower is better) Translates to: GMHETLGSSPALHKTEWYRRTRG*PAGRYH Trigger: ATGATATCTACCTGCAGGTCACCCACGTGTTCTCCG...GTACCACTCAGTCTTGTGCAGTGCTGGGGATGAGCCCAGGGTTTCATGCATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
||
| CDS-3UTR GCA 90 bp | ACCAGAGGGGACACTGGGGACATTGCTCAGATAGTAGAATGTTTGCTGGCATGCGCCGCACCATCCATTTaGGCAGGCCTTCTTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TRGDTGDIAQIVECLLACAAPSI*AGLLGH Trigger: GTGGCCAAGAAGGCCTGCGCAAATGGATGGTGCGGC...GCATGCCAGCAAACATTCTACTATCTGAGCAATGTCCCCAGTGTCCCCTCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108281.8 |
||
| 3UTR CAA 72 bp | AGAGGTGAGCGAACTGAAATAGAGGCAGCTTGTGACTaGAGACCAGCATGCACCCATGCATCCGGGCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGERTEIEAACD*RPACTHASGHP Trigger: TGGGTGCCCGGATGCATGGGTGCATGCTGGTCTCAAGTCACAAGCTGCCTCTATTTCAGTTCGCTCACCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGAGGGGACACTGGGGACATTGCTCAGATAGTAGAATGTTTGCTGGCATGCACTGTCCAGCAGCTCTaGCCACAGACCCTTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TRGDTGDIAQIVECLLACTVQQL*PQTLLH Trigger: GTGGAGAAGGGTCTGTGGCCAGAGCTGCTGGACAGT...GCATGCCAGCAAACATTCTACTATCTGAGCAATGTCCCCAGTGTCCCCTCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGACTCTAGGCACTTCCCAATTGTTTGGAGAAAATCTGTGGGCAGATACTGGAGTTCGTCACTCTaGCCCCATAGTGGCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLDSRHFPIVWRKSVGRYWSSSL*PHSGQP Trigger: GGGCTGGCCACTATGGGGCCAGAGTGACGAACTCCA...GTATCTGCCCACAGATTTTCTCCAAACAATTGGGAAGTGCCTAGAGTCCAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
||
| 3UTR CAA 72 bp | GATCCCAGAGTTTCATGTGCCAGGGAGGTACAGTACTaGACTCATGAGGGATTCCAGCCGACAGCTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DPRVSCAREVQY*THEGFQPTAPG Trigger: TCCTGGAGCTGTCGGCTGGAATCCCTCATGAGTCAAGTACTGTACCTCCCTGGCACATGAAACTCTGGGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
||
| CDS-3UTR CCA 90 bp | CTGAAAACAAGACCAAGCAGGACCCTTCACTGGATCCCAGAGTTTCATGTGCCAACTGTCCAGCAGCTCTaGCCACAGACCCTTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LKTRPSRTLHWIPEFHVPTVQQL*PQTLLH Trigger: GTGGAGAAGGGTCTGTGGCCAGAGCTGCTGGACAGT...TGGCACATGAAACTCTGGGATCCAGTGAAGGGTCCTGCTTGGTCTTGTTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
||
| CDS-3UTR TCA 90 bp | TGGTGTGTGCCTGTAGTCCCAGCACATGAGTGTCAAAGGCAGAAAGGAGGGTTGGGGCATCAAGAAGCGTaGCAAAGAGACGGTACTTAC | + |
|
Preference number: 4 (lower is better) Translates to: WCVPVVPAHECQRQKGGLGHQEA*QRDGTY Trigger: GTAAGTACCGTCTCTTTGTCACGCTTCTTGATGCCC...CAACCCTCCTTTCTGCCTTTGACACTCATGTGCTGGGACTACAGGCACACACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
||
| CDS-3UTR TCA 90 bp | TTGGCTCCCTTAGCTCTAGCCACTATGGAAGAAGTCTCTCTGCCCTGTGACAGCGGGCATCAAGAAGCGTaGCAAAGAGACGGTACTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LAPLALATMEEVSLPCDSGHQEA*QRDGTY Trigger: GTAAGTACCGTCTCTTTGTCACGCTTCTTGATGCCC...GCTGTCACAGGGCAGAGAGACTTCTTCCATAGTGGCTAGAGCTAAGGGAGCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127368.2 |
||
| CDS-3UTR CCA 90 bp | TTGATGATCGGGGCCTGGACTCTAGGCACTTCCCAATTGTTTGGAGAAAATCTGACTGTCCAGCAGCTCTaGCCACAGACCCTTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LMIGAWTLGTSQLFGENLTVQQL*PQTLLH Trigger: GTGGAGAAGGGTCTGTGGCCAGAGCTGCTGGACAGT...CAGATTTTCTCCAAACAATTGGGAAGTGCCTAGAGTCCAGGCCCCGATCATCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCTCCCTTAGCTCTAGCCACTATGGAAGAAGTCTCTCTGCCCTGTGACAGCTGTTCCACTGTTCAATaGGATCTGGCACAGCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LAPLALATMEEVSLPCDSCSTVQ*DLAQRR Trigger: TCTCCGCTGTGCCAGATCCCATTGAACAGTGGAACA...GCTGTCACAGGGCAGAGAGACTTCTTCCATAGTGGCTAGAGCTAAGGGAGCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127368.2 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGACTCTAGGCACTTCCCAATTGTTTGGAGAAAATCTGTGGGCAGATACTGTTCCACTGTTCAATaGGATCTGGCACAGCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLDSRHFPIVWRKSVGRYCSTVQ*DLAQRR Trigger: TCTCCGCTGTGCCAGATCCCATTGAACAGTGGAACA...GTATCTGCCCACAGATTTTCTCCAAACAATTGGGAAGTGCCTAGAGTCCAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
||
| CDS-3UTR CCA 90 bp | TTGATGATCGGGGCCTGGACTCTAGGCACTTCCCAATTGTTTGGAGAAAATCTGTGTTCCACTGTTCAATaGGATCTGGCACAGCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LMIGAWTLGTSQLFGENLCSTVQ*DLAQRR Trigger: TCTCCGCTGTGCCAGATCCCATTGAACAGTGGAACA...CAGATTTTCTCCAAACAATTGGGAAGTGCCTAGAGTCCAGGCCCCGATCATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
||
| CDS-3UTR TCA 90 bp | TTACCCAAGGGAGCTGGAATTCTGCTAGCCATAAATCCTATGTTCAGCCCTAAGGGGCATCAAGAAGCGTaGCAAAGAGACGGTACTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LPKGAGILLAINPMFSPKGHQEA*QRDGTY Trigger: GTAAGTACCGTCTCTTTGTCACGCTTCTTGATGCCC...CTTAGGGCTGAACATAGGATTTATGGCTAGCAGAATTCCAGCTCCCTTGGGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
||
| 3UTR CAA 72 bp | TTGATGATCGGGGCCTGGACTCTAGGCACTTCCCAATaGTTTGGAGAAAATCTGTGGGCAGATACCCTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LMIGAWTLGTSQ*FGENLWADTLK Trigger: TTTTAGGGTATCTGCCCACAGATTTTCTCCAAACAATTGGGAAGTGCCTAGAGTCCAGGCCCCGATCATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
||
| CDS CCA 90 bp | CCCGCTGCGCTGTGGTCACGGGCCAGCAGCAGCAACCATAGGGCCTaGCCATCTACCAGGGCGCGCCAGGCGCGGCACACTCGGCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PAALWSRASSSNHRA*PSTRARQARHTRRQ Trigger: CTGCCGCCGAGTGTGCCGCGCCTGGCGCGCCCTGGTAGATGGCCAGGCCCTATGGTTGCTGCTGCTGGCCCGTGACCACAGCGCAGCGGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039998.11 ENSMUST00000108281.8 |
||
| CDS CCA 90 bp | AGCAGGAGCAGCTCCGGGGGCAGACGGCTCAGGTCCAGGACCTCCTaGGGGTCGGGCTCCGGCGTCGGGACCCGGGTCCTGGATATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SRSSSGGRRLRSRTS*GSGSGVGTRVLDIQ Trigger: CTGGATATCCAGGACCCGGGTCCCGACGCCGGAGCCCGACCCCCAGGAGGTCCTGGACCTGAGCCGTCTGCCCCCGGAGCTGCTCCTGCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108281.8 ENSMUST00000151227.2 |
||
| CDS CCA 90 bp | AGACAGCGGCGGGCTAGTGTCAGCAGGGCGCGGCCCGCTGCGCTGTaGTCACGGGCCAGCAGCAGCAACCATAGGGCCTGGCCATCTACC | + |
|
Preference number: 5 (lower is better) Translates to: RQRRASVSRARPAAL*SRASSSNHRAWPST Trigger: GGTAGATGGCCAGGCCCTATGGTTGCTGCTGCTGGCCCGTGACCACAGCGCAGCGGGCCGCGCCCTGCTGACACTAGCCCGCCGCTGTCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039998.11 ENSMUST00000108281.8 |
||
| CDS CCA 90 bp | GGGTTGCTGATGAGGTTGCGTCCTAGCGGTCTCAGTGCGCAGAATTaGCCCAGCGGGCAGGGCGTGTCTTCGTGGGCAGGGGGCAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: GLLMRLRPSGLSAQN*PSGQGVSSWAGGRQ Trigger: CTGTCTGCCCCCTGCCCACGAAGACACGCCCTGCCCGCTGGGCCAATTCTGCGCACTGAGACCGCTAGGACGCAACCTCATCAGCAACCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039998.11 ENSMUST00000108281.8 |
||
| CDS GCA 90 bp | GGTACAGGTTTCCTGTTCTTCTCCACCACCCATCCATCCCCACCGTaGCGCACCATCCATTTGCGCAGGCCTTGGCCACAGGGGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GTGFLFFSTTHPSPP*RTIHLRRPWPQGLL Trigger: CAGCAACCCCTGTGGCCAAGGCCTGCGCAAATGGATGGTGCGGCACGGTGGGGATGGATGGGTGGTGGAGAAGAACAGGAAACCTGTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039998.11 |
||
| CDS GCA 90 bp | GGTACAGGTTTCCTGTTCTTCTCCACCACCCATCCATCCCCACCGTaGCGCACCATCCATTTGCGCAGGCCTTCTTGGCCACAGGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GTGFLFFSTTHPSPP*RTIHLRRPSWPQGL Trigger: CAACCCCTGTGGCCAAGAAGGCCTGCGCAAATGGATGGTGCGGCACGGTGGGGATGGATGGGTGGTGGAGAAGAACAGGAAACCTGTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108281.8 |
||
| CDS-3UTR CAA 90 bp | GAGGAGGCTGGCTATAGCCAAGAGAGCTTTGGTTCCTTACCCAAGGGAGCTGGACCTTGGCCACAGGGGTaGCTGATGAGGTTGCGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: EEAGYSQESFGSLPKGAGPWPQG*LMRLRP Trigger: AGGACGCAACCTCATCAGCAACCCCTGTGGCCAAGG...TCCAGCTCCCTTGGGTAAGGAACCAAAGCTCTCTTGGCTATAGCCAGCCTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039998.11 |
||
| CDS-3UTR CAA 90 bp | CTGCACAAGACTGAGTGGTACTGGTGTGTGCCTGTAGTCCCAGCACATGAGTGTCCATTTGCGCAGGCCTaGGCCACAGGGGTTGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LHKTEWYWCVPVVPAHECPFAQA*ATGVAD Trigger: ATCAGCAACCCCTGTGGCCAAGGCCTGCGCAAATGG...ACACTCATGTGCTGGGACTACAGGCACACACCAGTACCACTCAGTCTTGTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039998.11 |
||
| CDS-3UTR CAA 90 bp | ACTGAGTGGTACTGGTGTGTGCCTGTAGTCCCAGCACATGAGTGTCAAAGGCAGTCCACGACCTGCTTCTaGCGACACCAGCTGAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TEWYWCVPVVPAHECQRQSTTCF*RHQLKE Trigger: TTCCTTCAGCTGGTGTCGCAAGAAGCAGGTCGTGGA...CTGCCTTTGACACTCATGTGCTGGGACTACAGGCACACACCAGTACCACTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
||
| CDS-3UTR CAA 90 bp | GGCCTGGACTCTAGGCACTTCCCAATTGTTTGGAGAAAATCTGTGGGCAGATACTCTTGGCCACAGGGGTaGCTGATGAGGTTGCGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GLDSRHFPIVWRKSVGRYSWPQG*LMRLRP Trigger: AGGACGCAACCTCATCAGCAACCCCTGTGGCCAAGA...GTATCTGCCCACAGATTTTCTCCAAACAATTGGGAAGTGCCTAGAGTCCAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108281.8 |
||
| CDS-3UTR CAA 90 bp | AGGGATTCCAGCCGACAGCTCCAGGAAGGCACATTCAGATTGTCTTGCCAAAATTCCACGACCTGCTTCTaGCGACACCAGCTGAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RDSSRQLQEGTFRLSCQNSTTCF*RHQLKE Trigger: TTCCTTCAGCTGGTGTCGCAAGAAGCAGGTCGTGGA...ATTTTGGCAAGACAATCTGAATGTGCCTTCCTGGAGCTGTCGGCTGGAATCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
||
| CDS-3UTR CAA 90 bp | TTGATGATCGGGGCCTGGACTCTAGGCACTTCCCAATTGTTTGGAGAAAATCTGTCCACGACCTGCTTCTaGCGACACCAGCTGAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LMIGAWTLGTSQLFGENLSTTCF*RHQLKE Trigger: TTCCTTCAGCTGGTGTCGCAAGAAGCAGGTCGTGGA...CAGATTTTCTCCAAACAATTGGGAAGTGCCTAGAGTCCAGGCCCCGATCATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
||
| CDS CCA 90 bp | GGTGACCTGCAGGTAGATATCATTGTTCCACTGTTCAATGGGATCTaGCACAGCGGAGAACTTATCTATGACGTTCTGGTGGGCATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GDLQVDIIVPLFNGI*HSGELIYDVLVGIK Trigger: CTTGATGCCCACCAGAACGTCATAGATAAGTTCTCCGCTGTGCCAGATCCCATTGAACAGTGGAACAATGATATCTACCTGCAGGTCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
||
| CDS CCA 90 bp | AAAGCTCTGCAGGTAGATATCATTGTTCCACTGTTCAATGGGATCTaGCACAGCGGAGAACTTATCTATGACGTTCTGGTGGGCATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KALQVDIIVPLFNGI*HSGELIYDVLVGIK Trigger: CTTGATGCCCACCAGAACGTCATAGATAAGTTCTCCGCTGTGCCAGATCCCATTGAACAGTGGAACAATGATATCTACCTGCAGAGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127368.2 |
||
| CDS CCA 72 bp | ATGAGGTTGCGTCCTAGCGGTCTCAGTGCGCAGAATTaGCCCAGCGGGCAGGGCGTGTCTTCGTGGGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: MRLRPSGLSAQN*PSGQGVSSWAG Trigger: CCCTGCCCACGAAGACACGCCCTGCCCGCTGGGCCAATTCTGCGCACTGAGACCGCTAGGACGCAACCTCAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039998.11 ENSMUST00000108281.8 |
||
| CDS CAA 72 bp | ACCACCCATCCATCCCCACCGTGCCGCACCATCCATTaGCGCAGGCCTTGGCCACAGGGGTTGCTGATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TTHPSPPCRTIH*RRPWPQGLLMR Trigger: CCTCATCAGCAACCCCTGTGGCCAAGGCCTGCGCAAATGGATGGTGCGGCACGGTGGGGATGGATGGGTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039998.11 |
||
| CDS CAA 90 bp | ACCATCCATTTGCGCAGGCCTTGGCCACAGGGGTTGCTGATGAGGTaGCGTCCTAGCGGTCTCAGTGCGCAGAATTGGCCCAGCGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TIHLRRPWPQGLLMR*RPSGLSAQNWPSGQ Trigger: CTGCCCGCTGGGCCAATTCTGCGCACTGAGACCGCTAGGACGCAACCTCATCAGCAACCCCTGTGGCCAAGGCCTGCGCAAATGGATGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039998.11 |
||
| CDS CAA 90 bp | CCACCGTGCCGCACCATCCATTTGCGCAGGCCTTGGCCACAGGGGTaGCTGATGAGGTTGCGTCCTAGCGGTCTCAGTGCGCAGAATTGG | + |
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Preference number: 6 (lower is better) Translates to: PPCRTIHLRRPWPQG*LMRLRPSGLSAQNW Trigger: CCAATTCTGCGCACTGAGACCGCTAGGACGCAACCTCATCAGCAACCCCTGTGGCCAAGGCCTGCGCAAATGGATGGTGCGGCACGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039998.11 |
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| CDS CCA 72 bp | CCACCGTGCCGCACCATCCATTTGCGCAGGCCTTCTTaGCCACAGGGGTTGCTGATGAGGTTGCGTCCTAGC | + |
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Preference number: 6 (lower is better) Translates to: PPCRTIHLRRPS*PQGLLMRLRPS Trigger: GCTAGGACGCAACCTCATCAGCAACCCCTGTGGCCAAGAAGGCCTGCGCAAATGGATGGTGCGGCACGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108281.8 |
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| CDS CAA 72 bp | TTGCGCAGGCCTTGGCCACAGGGGTTGCTGATGAGGTaGCGTCCTAGCGGTCTCAGTGCGCAGAATTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: LRRPWPQGLLMR*RPSGLSAQNWP Trigger: GGGCCAATTCTGCGCACTGAGACCGCTAGGACGCAACCTCATCAGCAACCCCTGTGGCCAAGGCCTGCGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039998.11 |
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| CDS CAA 72 bp | CGCACCATCCATTTGCGCAGGCCTTGGCCACAGGGGTaGCTGATGAGGTTGCGTCCTAGCGGTCTCAGTGCG | + |
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Preference number: 6 (lower is better) Translates to: RTIHLRRPWPQG*LMRLRPSGLSA Trigger: CGCACTGAGACCGCTAGGACGCAACCTCATCAGCAACCCCTGTGGCCAAGGCCTGCGCAAATGGATGGTGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039998.11 |
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| CDS CAA 72 bp | CGCAGGCCTTCTTGGCCACAGGGGTTGCTGATGAGGTaGCGTCCTAGCGGTCTCAGTGCGCAGAATTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: RRPSWPQGLLMR*RPSGLSAQNWP Trigger: GGGCCAATTCTGCGCACTGAGACCGCTAGGACGCAACCTCATCAGCAACCCCTGTGGCCAAGAAGGCCTGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108281.8 |
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| CDS CAA 72 bp | ACCACCCATCCATCCCCACCGTGCCGCACCATCCATTaGCGCAGGCCTTCTTGGCCACAGGGGTTGCTGATG | + |
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Preference number: 6 (lower is better) Translates to: TTHPSPPCRTIH*RRPSWPQGLLM Trigger: CATCAGCAACCCCTGTGGCCAAGAAGGCCTGCGCAAATGGATGGTGCGGCACGGTGGGGATGGATGGGTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108281.8 |
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| CDS CAA 90 bp | ATCCATTTGCGCAGGCCTTCTTGGCCACAGGGGTTGCTGATGAGGTaGCGTCCTAGCGGTCTCAGTGCGCAGAATTGGCCCAGCGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: IHLRRPSWPQGLLMR*RPSGLSAQNWPSGQ Trigger: CTGCCCGCTGGGCCAATTCTGCGCACTGAGACCGCTAGGACGCAACCTCATCAGCAACCCCTGTGGCCAAGAAGGCCTGCGCAAATGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108281.8 |
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| CDS CAA 90 bp | CCGTGCCGCACCATCCATTTGCGCAGGCCTTCTTGGCCACAGGGGTaGCTGATGAGGTTGCGTCCTAGCGGTCTCAGTGCGCAGAATTGG | + |
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Preference number: 6 (lower is better) Translates to: PCRTIHLRRPSWPQG*LMRLRPSGLSAQNW Trigger: CCAATTCTGCGCACTGAGACCGCTAGGACGCAACCTCATCAGCAACCCCTGTGGCCAAGAAGGCCTGCGCAAATGGATGGTGCGGCACGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108281.8 |
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| CDS CAA 90 bp | TTCTTCTCCACCACCCATCCATCCCCACCGTGCCGCACCATCCATTaGCGCAGGCCTTCTTGGCCACAGGGGTTGCTGATGAGGTTGCGT | + |
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Preference number: 6 (lower is better) Translates to: FFSTTHPSPPCRTIH*RRPSWPQGLLMRLR Trigger: ACGCAACCTCATCAGCAACCCCTGTGGCCAAGAAGGCCTGCGCAAATGGATGGTGCGGCACGGTGGGGATGGATGGGTGGTGGAGAAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108281.8 |
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| CDS CAA 72 bp | ACCATCCATTTGCGCAGGCCTTCTTGGCCACAGGGGTaGCTGATGAGGTTGCGTCCTAGCGGTCTCAGTGCG | + |
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Preference number: 6 (lower is better) Translates to: TIHLRRPSWPQG*LMRLRPSGLSA Trigger: CGCACTGAGACCGCTAGGACGCAACCTCATCAGCAACCCCTGTGGCCAAGAAGGCCTGCGCAAATGGATGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108281.8 |
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| CDS GCA 72 bp | TCTGGCCACAGACCCTTCTCCACCAGGTCCACGACCTaGTTCTTGCGACACCAGCTGAAGGAAGTCACGAAG | + |
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Preference number: 6 (lower is better) Translates to: SGHRPFSTRSTT*FLRHQLKEVTK Trigger: CTTCGTGACTTCCTTCAGCTGGTGTCGCAAGAAGCAGGTCGTGGACCTGGTGGAGAAGGGTCTGTGGCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 |
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| CDS CCA 72 bp | CAGGTAGATATCATTGTTCCACTGTTCAATGGGATCTaGCACAGCGGAGAACTTATCTATGACGTTCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: QVDIIVPLFNGI*HSGELIYDVLV Trigger: CACCAGAACGTCATAGATAAGTTCTCCGCTGTGCCAGATCCCATTGAACAGTGGAACAATGATATCTACCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039998.11 ENSMUST00000108280.2 ENSMUST00000108281.8 ENSMUST00000127368.2 |
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