Pregenerated sensors for FBXO25 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038365Ensembl transcript IDs: ENSMUST00000043520.5, ENSMUST00000209913.2, ENSMUST00000210280.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTCAAGAAAGAAGTACAAATGGAGTCGGGGTCTCTCTCCCTCACTaGCGGTGCACAACTGCCCGCACATCTTCAGCGTCCTGTCAGGTT | + |
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Preference number: 1 (lower is better) Translates to: CQERSTNGVGVSLPH*RCTTARTSSASCQV Trigger: AACCTGACAGGACGCTGAAGATGTGCGGGCAGTTGTGCACCGTCAGTGAGGGAGAGAGACCCCGACTCCATTTGTACTTCTTTCTTGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| 3UTR CCA 90 bp | TTTCTACAAGAGAACTTCAGCCTCACTGGGCTGTTTCCAGCTCCTTaGCAGAGGCTCTATTCTGGTTTGGAGCCCACATCCCGAGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: FLQENFSLTGLFPAP*QRLYSGLEPTSRVW Trigger: CCAGACTCGGGATGTGGGCTCCAAACCAGAATAGAGCCTCTGCCAAGGAGCTGGAAACAGCCCAGTGAGGCTGAAGTTCTCTTGTAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| 3UTR CCA 90 bp | ACTTTACCCAGGAAAGGAATTTCTACAAGAGAACTTCAGCCTCACTaGGCTGTTTCCAGCTCCTTGGCAGAGGCTCTATTCTGGTTTGGA | + |
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Preference number: 1 (lower is better) Translates to: TLPRKGISTRELQPH*AVSSSLAEALFWFG Trigger: TCCAAACCAGAATAGAGCCTCTGCCAAGGAGCTGGAAACAGCCCAGTGAGGCTGAAGTTCTCTTGTAGAAATTCCTTTCCTGGGTAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| 3UTR CAA 90 bp | CACATCTTCAGCGTCCTGTCAGGTTCTCCAAGGAGCAAGCGAGGGTaGCACAGGTACAGGCAGTCACTGAGCCTGTCGTCACTTGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: HIFSVLSGSPRSKRG*HRYRQSLSLSSLVS Trigger: TGACACAAGTGACGACAGGCTCAGTGACTGCCTGTACCTGTGCAACCCTCGCTTGCTCCTTGGAGAACCTGACAGGACGCTGAAGATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| 3UTR CAA 90 bp | ATTTCTACAAGAGAACTTCAGCCTCACTGGGCTGTTTCCAGCTCCTaGGCAGAGGCTCTATTCTGGTTTGGAGCCCACATCCCGAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: ISTRELQPHWAVSSS*AEALFWFGAHIPSL Trigger: CAGACTCGGGATGTGGGCTCCAAACCAGAATAGAGCCTCTGCCAAGGAGCTGGAAACAGCCCAGTGAGGCTGAAGTTCTCTTGTAGAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAAAGGAATTTCTACAAGAGAACTTCAGCCTCACTGGGCTGTTTCCAGCTCCGTTCACAGCCCCACGTaGATTCCTAGCTCCATCTCG | + |
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Preference number: 2 (lower is better) Translates to: RKGISTRELQPHWAVSSSVHSPT*IPSSIS Trigger: CGAGATGGAGCTAGGAATGCACGTGGGGCTGTGAAC...GGAGCTGGAAACAGCCCAGTGAGGCTGAAGTTCTCTTGTAGAAATTCCTTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAAAGGAATTTCTACAAGAGAACTTCAGCCTCACTGGGCTGTTTCCAGCTAGAAAGAAGTACAAATaGAGTCGGGGTCTCTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: PGKEFLQENFSLTGLFPARKKYK*SRGLSP Trigger: GGGAGAGAGACCCCGACTCCATTTGTACTTCTTTCT...AGCTGGAAACAGCCCAGTGAGGCTGAAGTTCTCTTGTAGAAATTCCTTTCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| 3UTR-3UTR CCA 90 bp | CATGGCTCATCACTTTACCCAGGAAAGGAATTTCTACAAGAGAACTTCAGCCTCAGAAAGAAGTACAAATaGAGTCGGGGTCTCTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: HGSSLYPGKEFLQENFSLRKKYK*SRGLSP Trigger: GGGAGAGAGACCCCGACTCCATTTGTACTTCTTTCT...GAGGCTGAAGTTCTCTTGTAGAAATTCCTTTCCTGGGTAAAGTGATGAGCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| 3UTR-3UTR TCA 90 bp | ATAAACATGGCTCATCACTTTACCCAGGAAAGGAATTTCTACAAGAGAACTTCATGGAAAACTGTCTTTTaGCAACCAAGAAGGACATTC | + |
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Preference number: 2 (lower is better) Translates to: INMAHHFTQERNFYKRTSWKTVF*QPRRTF Trigger: GAATGTCCTTCTTGGTTGTCAAAAGACAGTTTTCCA...TGAAGTTCTCTTGTAGAAATTCCTTTCCTGGGTAAAGTGATGAGCCATGTTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| 3UTR TCA 72 bp | AGAAGTACAAATGGAGTCGGGGTCTCTCTCCCTCACTaGCGGTGCACAACTGCCCGCACATCTTCAGCGTCC | + |
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Preference number: 3 (lower is better) Translates to: RSTNGVGVSLPH*RCTTARTSSAS Trigger: GGACGCTGAAGATGTGCGGGCAGTTGTGCACCGTCAGTGAGGGAGAGAGACCCCGACTCCATTTGTACTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| 3UTR-3UTR CAA 90 bp | AGGAAAGGAATTTCTACAAGAGAACTTCAGCCTCACTGGGCTGTTTCCAGCTCCAGGCTCTATTCTGGTTaGGAGCCCACATCCCGAGTC | + |
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Preference number: 3 (lower is better) Translates to: RKGISTRELQPHWAVSSSRLYSG*EPTSRV Trigger: GACTCGGGATGTGGGCTCCAAACCAGAATAGAGCCT...GGAGCTGGAAACAGCCCAGTGAGGCTGAAGTTCTCTTGTAGAAATTCCTTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGGAAAGGAATTTCTACAAGAGAACTTCAGCCTCACTGGGCTGTTTCCAGCTGGAAACACGGGGACATaGATGCTAGCTATGGCCAGT | + |
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Preference number: 3 (lower is better) Translates to: PGKEFLQENFSLTGLFPAGNTGT*MLAMAS Trigger: ACTGGCCATAGCTAGCATCAATGTCCCCGTGTTTCC...AGCTGGAAACAGCCCAGTGAGGCTGAAGTTCTCTTGTAGAAATTCCTTTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| 3UTR CCA 72 bp | AGGAAAGGAATTTCTACAAGAGAACTTCAGCCTCACTaGGCTGTTTCCAGCTCCTTGGCAGAGGCTCTATTC | + |
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Preference number: 3 (lower is better) Translates to: RKGISTRELQPH*AVSSSLAEALF Trigger: GAATAGAGCCTCTGCCAAGGAGCTGGAAACAGCCCAGTGAGGCTGAAGTTCTCTTGTAGAAATTCCTTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| 3UTR-3UTR CAA 90 bp | ATAAACATGGCTCATCACTTTACCCAGGAAAGGAATTTCTACAAGAGAACTTCAAGGCTCTATTCTGGTTaGGAGCCCACATCCCGAGTC | + |
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Preference number: 3 (lower is better) Translates to: INMAHHFTQERNFYKRTSRLYSG*EPTSRV Trigger: GACTCGGGATGTGGGCTCCAAACCAGAATAGAGCCT...TGAAGTTCTCTTGTAGAAATTCCTTTCCTGGGTAAAGTGATGAGCCATGTTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| 3UTR-3UTR CAA 90 bp | AGGAAAGGAATTTCTACAAGAGAACTTCAGCCTCACTGGGCTGTTTCCAGCTCCCAAGGATCAACTGTTTaGTTCTTCATCCCAATTACT | + |
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Preference number: 3 (lower is better) Translates to: RKGISTRELQPHWAVSSSQGSTV*FFIPIT Trigger: AGTAATTGGGATGAAGAACAAAACAGTTGATCCTTG...GGAGCTGGAAACAGCCCAGTGAGGCTGAAGTTCTCTTGTAGAAATTCCTTTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| 3UTR TCA 72 bp | TTCATCCCAATTACTGTAGGATGGAAAACTGTCTTTTaGCAACCAAGAAGGACATTCTCGGTTGTTCATGTC | + |
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Preference number: 3 (lower is better) Translates to: FIPITVGWKTVF*QPRRTFSVVHV Trigger: GACATGAACAACCGAGAATGTCCTTCTTGGTTGTCAAAAGACAGTTTTCCATCCTACAGTAATTGGGATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| 3UTR-3UTR CAA 90 bp | ATAAACATGGCTCATCACTTTACCCAGGAAAGGAATTTCTACAAGAGAACTTCACAAGGATCAACTGTTTaGTTCTTCATCCCAATTACT | + |
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Preference number: 3 (lower is better) Translates to: INMAHHFTQERNFYKRTSQGSTV*FFIPIT Trigger: AGTAATTGGGATGAAGAACAAAACAGTTGATCCTTG...TGAAGTTCTCTTGTAGAAATTCCTTTCCTGGGTAAAGTGATGAGCCATGTTTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| CDS-3UTR TCA 90 bp | CTGCCCGCACATCTTCAGCGTCCTGTCAGGTTCTCCAAGGAGCAAGCGAGGGTTCCGGAGACACAGGAGTaGAGCAGCTGTCGGGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LPAHLQRPVRFSKEQARVPETQE*SSCRGQ Trigger: CTGACCCCGACAGCTGCTTCACTCCTGTGTCTCCGG...AACCCTCGCTTGCTCCTTGGAGAACCTGACAGGACGCTGAAGATGTGCGGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| CDS-3UTR GCA 90 bp | CCAAGGAGCAAGCGAGGGTTGCACAGGTACAGGCAGTCACTGAGCCTGTCGTCATTCTGCAGCTGCTGCTaGCAGCTGAGGACGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: PRSKRGLHRYRQSLSLSSFCSCC*QLRTVS Trigger: GGAGACCGTCCTCAGCTGGCAGCAGCAGCTGCAGAA...TGACGACAGGCTCAGTGACTGCCTGTACCTGTGCAACCCTCGCTTGCTCCTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| CDS-3UTR GCA 90 bp | AGCGTCCTGTCAGGTTCTCCAAGGAGCAAGCGAGGGTTGCACAGGTACAGGCAGTGGAGGTTCTGCAGCTaGTGCTGCCAGCTGAGGACG | + |
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Preference number: 4 (lower is better) Translates to: SVLSGSPRSKRGLHRYRQWRFCS*CCQLRT Trigger: CGTCCTCAGCTGGCAGCAGCAGCTGCAGAACCTCCA...CTGCCTGTACCTGTGCAACCCTCGCTTGCTCCTTGGAGAACCTGACAGGACGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| CDS-3UTR GCA 90 bp | AGCGTCCTGTCAGGTTCTCCAAGGAGCAAGCGAGGGTTGCACAGGTACAGGCAGGTCACCTGGAGGTTCTaGAGCTGCTGCTGCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: SVLSGSPRSKRGLHRYRQVTWRF*SCCCQL Trigger: CAGCTGGCAGCAGCAGCTGCAGAACCTCCAGGTGAC...CTGCCTGTACCTGTGCAACCCTCGCTTGCTCCTTGGAGAACCTGACAGGACGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| CDS-3UTR GCA 90 bp | CCAAGGAGCAAGCGAGGGTTGCACAGGTACAGGCAGTCACTGAGCCTGTCGTCAGTCACCTGGAGGTTCTaGAGCTGCTGCTGCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: PRSKRGLHRYRQSLSLSSVTWRF*SCCCQL Trigger: CAGCTGGCAGCAGCAGCTGCAGAACCTCCAGGTGAC...TGACGACAGGCTCAGTGACTGCCTGTACCTGTGCAACCCTCGCTTGCTCCTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| CDS-3UTR GCA 90 bp | TTCTCCAAGGAGCAAGCGAGGGTTGCACAGGTACAGGCAGTCACTGAGCCTGTCTGGAGGTTCTGCAGCTaGTGCTGCCAGCTGAGGACG | + |
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Preference number: 4 (lower is better) Translates to: FSKEQARVAQVQAVTEPVWRFCS*CCQLRT Trigger: CGTCCTCAGCTGGCAGCAGCAGCTGCAGAACCTCCA...GACAGGCTCAGTGACTGCCTGTACCTGTGCAACCCTCGCTTGCTCCTTGGAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| CDS-3UTR TCA 90 bp | AGGAAAGGAATTTCTACAAGAGAACTTCAGCCTCACTGGGCTGTTTCCAGCTCCGCTGCTGCTGCCAGCTaGGGACGGTCTCCAGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: RKGISTRELQPHWAVSSSAAAAS*GRSPGG Trigger: GCCGCCTGGAGACCGTCCTCAGCTGGCAGCAGCAGC...GGAGCTGGAAACAGCCCAGTGAGGCTGAAGTTCTCTTGTAGAAATTCCTTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| CDS-3UTR GCA 90 bp | CACCAACTACACGACACAGAAAGCACAAGGGACAGCTGTAGACAAGGGCACGGGAGGTTCTGCAGCTGCTaGTGCCAGCTGAGGACGGTC | + |
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Preference number: 4 (lower is better) Translates to: HQLHDTESTRDSCRQGHGRFCSC*CQLRTV Trigger: GACCGTCCTCAGCTGGCAGCAGCAGCTGCAGAACCT...CCCGTGCCCTTGTCTACAGCTGTCCCTTGTGCTTTCTGTGTCGTGTAGTTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| CDS-3UTR GCA 90 bp | CCGTGGCGGGTACTCTTTCCCGTTTTCTCCCCTCTCTGTTTAAGATGCGGACGAGTCACCTGGAGGTTCTaGAGCTGCTGCTGCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: PWRVLFPVFSPLCLRCGRVTWRF*SCCCQL Trigger: CAGCTGGCAGCAGCAGCTGCAGAACCTCCAGGTGAC...TCGTCCGCATCTTAAACAGAGAGGGGAGAAAACGGGAAAGAGTACCCGCCACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210280.2 |
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| CDS-3UTR CCA 90 bp | CCAAGGAGCAAGCGAGGGTTGCACAGGTACAGGCAGTCACTGAGCCTGTCGTCAACCTGCTTTGTCACCTaGAGGTTCTGCAGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PRSKRGLHRYRQSLSLSSTCFVT*RFCSCC Trigger: GCAGCAGCTGCAGAACCTCCAGGTGACAAAGCAGGT...TGACGACAGGCTCAGTGACTGCCTGTACCTGTGCAACCCTCGCTTGCTCCTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043520.5 |
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| CDS-3UTR CCA 90 bp | CAGCGTCCTGTCAGGTTCTCCAAGGAGCAAGCGAGGGTTGCACAGGTACAGGCAAAGAGGATGCTGCAGTaGCGGCAGAAGTGTAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: QRPVRFSKEQARVAQVQAKRMLQ*RQKCSV Trigger: CACGCTACACTTCTGCCGCCACTGCAGCATCCTCTT...TGCCTGTACCTGTGCAACCCTCGCTTGCTCCTTGGAGAACCTGACAGGACGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| CDS-3UTR TCA 90 bp | TCGTGTTCAATGAGGACTCATTTGGCCACAGCCACTGGGGTTGTGAAAATACATGCTGCTGCTGCCAGCTaGGGACGGTCTCCAGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: SCSMRTHLATATGVVKIHAAAAS*GRSPGG Trigger: GCCGCCTGGAGACCGTCCTCAGCTGGCAGCAGCAGC...ATGTATTTTCACAACCCCAGTGGCTGTGGCCAAATGAGTCCTCATTGAACACGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| CDS-3UTR CCA 90 bp | TTCCCGTGGCGGGTACTCTTTCCCGTTTTCTCCCCTCTCTGTTTAAGATGCGGACCAGGATGCCAAGGGTaGAGCTCAGGTCCTGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: FPWRVLFPVFSPLCLRCGPGCQG*SSGPGG Trigger: TCCTCCAGGACCTGAGCTCCACCCTTGGCATCCTGG...TCCGCATCTTAAACAGAGAGGGGAGAAAACGGGAAAGAGTACCCGCCACGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210280.2 |
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| CDS-3UTR CCA 90 bp | GAGTATACCTGTGTGCCCCCACCTCCGCTCCCAGTGTCTAGCAGAACGCTTTCAAGGGTTGGTGTTACCTaGCCCAGGGTGACAATGTCC | + |
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Preference number: 4 (lower is better) Translates to: EYTCVPPPPLPVSSRTLSRVGVT*PRVTMS Trigger: GGACATTGTCACCCTGGGCCAGGTAACACCAACCCT...TGAAAGCGTTCTGCTAGACACTGGGAGCGGAGGTGGGGGCACACAGGTATACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210280.2 |
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| CDS-3UTR TCA 90 bp | TTCCCGTGGCGGGTACTCTTTCCCGTTTTCTCCCCTCTCTGTTTAAGATGCGGATTACCTGGCCCAGGGTaGCAATGTCCCAGCCATCTG | + |
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Preference number: 4 (lower is better) Translates to: FPWRVLFPVFSPLCLRCGLPGPG*QCPSHL Trigger: CAGATGGCTGGGACATTGTCACCCTGGGCCAGGTAA...TCCGCATCTTAAACAGAGAGGGGAGAAAACGGGAAAGAGTACCCGCCACGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210280.2 |
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| CDS-3UTR GCA 90 bp | TGGCGGGTACTCTTTCCCGTTTTCTCCCCTCTCTGTTTAAGATGCGGACGAACATTCTGCAGCTGCTGCTaGCAGCTGAGGACGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: WRVLFPVFSPLCLRCGRTFCSCC*QLRTVS Trigger: GGAGACCGTCCTCAGCTGGCAGCAGCAGCTGCAGAA...TGTTCGTCCGCATCTTAAACAGAGAGGGGAGAAAACGGGAAAGAGTACCCGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210280.2 |
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| CDS-3UTR GCA 90 bp | TGGCGGGTACTCTTTCCCGTTTTCTCCCCTCTCTGTTTAAGATGCGGACGAACAAGGTTCTGCAGCTGCTaGTGCCAGCTGAGGACGGTC | + |
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Preference number: 4 (lower is better) Translates to: WRVLFPVFSPLCLRCGRTRFCSC*CQLRTV Trigger: GACCGTCCTCAGCTGGCAGCAGCAGCTGCAGAACCT...TGTTCGTCCGCATCTTAAACAGAGAGGGGAGAAAACGGGAAAGAGTACCCGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210280.2 |
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| CDS-3UTR GCA 90 bp | GAGTATACCTGTGTGCCCCCACCTCCGCTCCCAGTGTCTAGCAGAACGCTTTCATCCAGAAGAGGATGCTaGAGTGGCGGCAGAAGTGTA | + |
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Preference number: 4 (lower is better) Translates to: EYTCVPPPPLPVSSRTLSSRRGC*SGGRSV Trigger: TACACTTCTGCCGCCACTGCAGCATCCTCTTCTGGA...TGAAAGCGTTCTGCTAGACACTGGGAGCGGAGGTGGGGGCACACAGGTATACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210280.2 |
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| CDS-3UTR TCA 90 bp | CTGCCCGCACATCTTCAGCGTCCTGTCAGGTTCTCCAAGGAGCAAGCGAGGGTTATCAGGCGAGGGTTCTaGTGGTCATCAAGAACCTTT | + |
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Preference number: 4 (lower is better) Translates to: LPAHLQRPVRFSKEQARVIRRGF*WSSRTF Trigger: AAAGGTTCTTGATGACCATCAGAACCCTCGCCTGAT...AACCCTCGCTTGCTCCTTGGAGAACCTGACAGGACGCTGAAGATGTGCGGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| CDS-3UTR TCA 90 bp | TGGCGGGTACTCTTTCCCGTTTTCTCCCCTCTCTGTTTAAGATGCGGACGAACAGCCGCCTGTCTTCACTaGGCATGTACAGGGTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: WRVLFPVFSPLCLRCGRTAACLH*ACTGLV Trigger: CACCAACCCTGTACATGCTCAGTGAAGACAGGCGGC...TGTTCGTCCGCATCTTAAACAGAGAGGGGAGAAAACGGGAAAGAGTACCCGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210280.2 |
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| CDS-3UTR GCA 90 bp | GAGTATACCTGTGTGCCCCCACCTCCGCTCCCAGTGTCTAGCAGAACGCTTTCAATGTTGTTCAGCATGTaGAGGGGCAGGTCACTGAGT | + |
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Preference number: 4 (lower is better) Translates to: EYTCVPPPPLPVSSRTLSMLFSM*RGRSLS Trigger: ACTCAGTGACCTGCCCCTGCACATGCTGAACAACAT...TGAAAGCGTTCTGCTAGACACTGGGAGCGGAGGTGGGGGCACACAGGTATACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210280.2 |
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| CDS-3UTR CCA 90 bp | TCCATCTCGTGTTCAATGAGGACTCATTTGGCCACAGCCACTGGGGTTGTGAAACCAGGATGCCAAGGGTaGAGCTCAGGTCCTGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: SISCSMRTHLATATGVVKPGCQG*SSGPGG Trigger: TCCTCCAGGACCTGAGCTCCACCCTTGGCATCCTGG...TTTCACAACCCCAGTGGCTGTGGCCAAATGAGTCCTCATTGAACACGAGATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| CDS-3UTR CCA 90 bp | ACAAGAGAACTTCAGCCTCACTGGGCTGTTTCCAGCTCCTTGGCAGAGGCTCTAAGGGTTGGTGTTACCTaGCCCAGGGTGACAATGTCC | + |
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Preference number: 4 (lower is better) Translates to: TRELQPHWAVSSSLAEALRVGVT*PRVTMS Trigger: GGACATTGTCACCCTGGGCCAGGTAACACCAACCCT...TAGAGCCTCTGCCAAGGAGCTGGAAACAGCCCAGTGAGGCTGAAGTTCTCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| CDS-3UTR CCA 90 bp | AGCGTCCTGTCAGGTTCTCCAAGGAGCAAGCGAGGGTTGCACAGGTACAGGCAGCCCCGTACTGCTCTTTaGTCGGGTAATACTTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: SVLSGSPRSKRGLHRYRQPRTAL*SGNTSE Trigger: TTCAGAAGTATTACCCGACCAAAGAGCAGTACGGGG...CTGCCTGTACCTGTGCAACCCTCGCTTGCTCCTTGGAGAACCTGACAGGACGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| CDS-3UTR CCA 90 bp | TTCTCCAAGGAGCAAGCGAGGGTTGCACAGGTACAGGCAGTCACTGAGCCTGTCTTTACCTTTGTCACCTaGAGGTTCTGCAGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: FSKEQARVAQVQAVTEPVFTFVT*RFCSCC Trigger: GCAGCAGCTGCAGAACCTCCAGGTGACAAAGGTAAA...GACAGGCTCAGTGACTGCCTGTACCTGTGCAACCCTCGCTTGCTCCTTGGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209913.2 |
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| 3UTR CAA 72 bp | CTGTTTCCAGCTCCTTGGCAGAGGCTCTATTCTGGTTaGGAGCCCACATCCCGAGTCTGGATCTATGATGGC | + |
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Preference number: 4 (lower is better) Translates to: LFPAPWQRLYSG*EPTSRVWIYDG Trigger: GCCATCATAGATCCAGACTCGGGATGTGGGCTCCAAACCAGAATAGAGCCTCTGCCAAGGAGCTGGAAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| 3UTR CAA 72 bp | AGAGAACTTCAGCCTCACTGGGCTGTTTCCAGCTCCTaGGCAGAGGCTCTATTCTGGTTTGGAGCCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: RELQPHWAVSSS*AEALFWFGAHI Trigger: GATGTGGGCTCCAAACCAGAATAGAGCCTCTGCCAAGGAGCTGGAAACAGCCCAGTGAGGCTGAAGTTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR GCA 90 bp | AGGAAAGGAATTTCTACAAGAGAACTTCAGCCTCACTGGGCTGTTTCCAGCTCCCCCCTCTCACCAGGATaGCAAGGGTGGAGCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RKGISTRELQPHWAVSSSPLSPG*QGWSSG Trigger: ACCTGAGCTCCACCCTTGGCATCCTGGTGAGAGGGG...GGAGCTGGAAACAGCCCAGTGAGGCTGAAGTTCTCTTGTAGAAATTCCTTTCCT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAAGGAATTTCTACAAGAGAACTTCAGCCTCACTGGGCTGTTTCCAGCTAGGTTCTGCAGCTGCTaGTGCCAGCTGAGGACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGKEFLQENFSLTGLFPARFCSC*CQLRTV Trigger: GACCGTCCTCAGCTGGCAGCAGCAGCTGCAGAACCT...AGCTGGAAACAGCCCAGTGAGGCTGAAGTTCTCTTGTAGAAATTCCTTTCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR GCA 90 bp | ACTCTTTCCCGTTTTCTCCCCTCTCTGTTTAAGATGCGGACGAACAGTTTGTCCTGGAGGTTCTGCAGCTaGTGCTGCCAGCTGAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: TLSRFLPSLFKMRTNSLSWRFCS*CCQLRT Trigger: CGTCCTCAGCTGGCAGCAGCAGCTGCAGAACCTCCA...GGACAAACTGTTCGTCCGCATCTTAAACAGAGAGGGGAGAAAACGGGAAAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210280.2 |
||
| CDS-3UTR GCA 90 bp | CCGTGGCGGGTACTCTTTCCCGTTTTCTCCCCTCTCTGTTTAAGATGCGGACGAAGGCCAGTGTTTACCTaGTTTGTCACCTGGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PWRVLFPVFSPLCLRCGRRPVFT*FVTWRF Trigger: GAACCTCCAGGTGACAAAGCAGGTAAACACTGGCCT...TCGTCCGCATCTTAAACAGAGAGGGGAGAAAACGGGAAAGAGTACCCGCCACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210280.2 |
||
| CDS-3UTR GCA 90 bp | CACCAACTACACGACACAGAAAGCACAAGGGACAGCTGTAGACAAGGGCACGGGAAGAGGTCAATGAAGTaGTCCGGAGACACAGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HQLHDTESTRDSCRQGHGKRSMK*SGDTGV Trigger: CACTCCTGTGTCTCCGGAGCACTTCATTGACCTCTT...CCCGTGCCCTTGTCTACAGCTGTCCCTTGTGCTTTCTGTGTCGTGTAGTTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR CCA 90 bp | TGGCGGGTACTCTTTCCCGTTTTCTCCCCTCTCTGTTTAAGATGCGGACGAACAACCTGCTTTGTCACCTaGAGGTTCTGCAGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WRVLFPVFSPLCLRCGRTTCFVT*RFCSCC Trigger: GCAGCAGCTGCAGAACCTCCAGGTGACAAAGCAGGT...TGTTCGTCCGCATCTTAAACAGAGAGGGGAGAAAACGGGAAAGAGTACCCGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210280.2 |
||
| CDS-3UTR TCA 90 bp | AGGAAAGGAATTTCTACAAGAGAACTTCAGCCTCACTGGGCTGTTTCCAGCTCCGCCGCCTGTCTTCACTaGGCATGTACAGGGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RKGISTRELQPHWAVSSSAACLH*ACTGLV Trigger: CACCAACCCTGTACATGCTCAGTGAAGACAGGCGGC...GGAGCTGGAAACAGCCCAGTGAGGCTGAAGTTCTCTTGTAGAAATTCCTTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR GCA 90 bp | AGCGTCCTGTCAGGTTCTCCAAGGAGCAAGCGAGGGTTGCACAGGTACAGGCAGCATGCCTTTCCTTTGTaGTTTCCTTATGGACGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVLSGSPRSKRGLHRYRQHAFPL*FPYGRR Trigger: TCTACGTCCATAAGGAAAGCACAAAGGAAAGGCATG...CTGCCTGTACCTGTGCAACCCTCGCTTGCTCCTTGGAGAACCTGACAGGACGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR CCA 90 bp | CACCAACTACACGACACAGAAAGCACAAGGGACAGCTGTAGACAAGGGCACGGGCTCAGTGAGGTTAACTaGGACTTCGCAATTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HQLHDTESTRDSCRQGHGLSEVN*DFAISC Trigger: GCAGCTAATTGCGAAGTCCCAGTTAACCTCACTGAG...CCCGTGCCCTTGTCTACAGCTGTCCCTTGTGCTTTCTGTGTCGTGTAGTTGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR TCA 90 bp | TTCCCGTGGCGGGTACTCTTTCCCGTTTTCTCCCCTCTCTGTTTAAGATGCGGAATCAGGCGAGGGTTCTaGTGGTCATCAAGAACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FPWRVLFPVFSPLCLRCGIRRGF*WSSRTF Trigger: AAAGGTTCTTGATGACCATCAGAACCCTCGCCTGAT...TCCGCATCTTAAACAGAGAGGGGAGAAAACGGGAAAGAGTACCCGCCACGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210280.2 |
||
| CDS-3UTR TCA 90 bp | TCGTGTTCAATGAGGACTCATTTGGCCACAGCCACTGGGGTTGTGAAAATACATGCCGCCTGTCTTCACTaGGCATGTACAGGGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SCSMRTHLATATGVVKIHAACLH*ACTGLV Trigger: CACCAACCCTGTACATGCTCAGTGAAGACAGGCGGC...ATGTATTTTCACAACCCCAGTGGCTGTGGCCAAATGAGTCCTCATTGAACACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR CCA 90 bp | ACTCTTTCCCGTTTTCTCCCCTCTCTGTTTAAGATGCGGACGAACAGTTTGTCCAAGAGGATGCTGCAGTaGCGGCAGAAGTGTAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TLSRFLPSLFKMRTNSLSKRMLQ*RQKCSV Trigger: CACGCTACACTTCTGCCGCCACTGCAGCATCCTCTT...GGACAAACTGTTCGTCCGCATCTTAAACAGAGAGGGGAGAAAACGGGAAAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210280.2 |
||
| CDS-3UTR CCA 90 bp | CCAAGGAGCAAGCGAGGGTTGCACAGGTACAGGCAGTCACTGAGCCTGTCGTCATTTAAGATAATGCTGTaGTTGATGGTGTACTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PRSKRGLHRYRQSLSLSSFKIML*LMVYWL Trigger: TAGCCAGTACACCATCAACCACAGCATTATCTTAAA...TGACGACAGGCTCAGTGACTGCCTGTACCTGTGCAACCCTCGCTTGCTCCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR CCA 90 bp | CATGGCTCATCACTTTACCCAGGAAAGGAATTTCTACAAGAGAACTTCAGCCTCGTGGAGCTCAGGTCCTaGAGGAGGCCTTTGATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HGSSLYPGKEFLQENFSLVELRS*RRPLIR Trigger: CCTGATCAAAGGCCTCCTCCAGGACCTGAGCTCCAC...GAGGCTGAAGTTCTCTTGTAGAAATTCCTTTCCTGGGTAAAGTGATGAGCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR CCA 90 bp | TCGTGTTCAATGAGGACTCATTTGGCCACAGCCACTGGGGTTGTGAAAATACATAGGGTTGGTGTTACCTaGCCCAGGGTGACAATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SCSMRTHLATATGVVKIHRVGVT*PRVTMS Trigger: GGACATTGTCACCCTGGGCCAGGTAACACCAACCCT...ATGTATTTTCACAACCCCAGTGGCTGTGGCCAAATGAGTCCTCATTGAACACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR TCA 90 bp | CAAGGATCAACTGTTTTGTTCTTCATCCCAATTACTGTAGGATGGAAAACTGTCCCGGAGACACAGGAGTaGAGCAGCTGTCGGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QGSTVLFFIPITVGWKTVPETQE*SSCRGQ Trigger: CTGACCCCGACAGCTGCTTCACTCCTGTGTCTCCGG...GACAGTTTTCCATCCTACAGTAATTGGGATGAAGAACAAAACAGTTGATCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAAGGAATTTCTACAAGAGAACTTCAGCCTCACTGGGCTGTTTCCAGCTATGTTGTTCAGCATGTaGAGGGGCAGGTCACTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PGKEFLQENFSLTGLFPAMLFSM*RGRSLS Trigger: ACTCAGTGACCTGCCCCTGCACATGCTGAACAACAT...AGCTGGAAACAGCCCAGTGAGGCTGAAGTTCTCTTGTAGAAATTCCTTTCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR GCA 90 bp | CATCCCAATTACTGTAGGATGGAAAACTGTCTTTTGACAACCAAGAAGGACATTTTCTGCAGCTGCTGCTaGCAGCTGAGGACGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HPNYCRMENCLLTTKKDIFCSCC*QLRTVS Trigger: GGAGACCGTCCTCAGCTGGCAGCAGCAGCTGCAGAA...AATGTCCTTCTTGGTTGTCAAAAGACAGTTTTCCATCCTACAGTAATTGGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR GCA 90 bp | ACAAGAGAACTTCAGCCTCACTGGGCTGTTTCCAGCTCCTTGGCAGAGGCTCTAAAATGTCTACAAAACTaGTGCTCAGCAAAGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TRELQPHWAVSSSLAEALKCLQN*CSAKWY Trigger: GTACCACTTTGCTGAGCAGCAGTTTTGTAGACATTT...TAGAGCCTCTGCCAAGGAGCTGGAAACAGCCCAGTGAGGCTGAAGTTCTCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR CCA 90 bp | CATCTCGTGTTCAATGAGGACTCATTTGGCCACAGCCACTGGGGTTGTGAAAATCCCCGTACTGCTCTTTaGTCGGGTAATACTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HLVFNEDSFGHSHWGCENPRTAL*SGNTSE Trigger: TTCAGAAGTATTACCCGACCAAAGAGCAGTACGGGG...ATTTTCACAACCCCAGTGGCTGTGGCCAAATGAGTCCTCATTGAACACGAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR CCA 90 bp | ACTCTTTCCCGTTTTCTCCCCTCTCTGTTTAAGATGCGGACGAACAGTTTGTCCCCCCGTACTGCTCTTTaGTCGGGTAATACTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLSRFLPSLFKMRTNSLSPRTAL*SGNTSE Trigger: TTCAGAAGTATTACCCGACCAAAGAGCAGTACGGGG...GGACAAACTGTTCGTCCGCATCTTAAACAGAGAGGGGAGAAAACGGGAAAGAGT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000210280.2 |
||
| CDS-3UTR TCA 90 bp | ATCTCGTGTTCAATGAGGACTCATTTGGCCACAGCCACTGGGGTTGTGAAAATAATCAGGCGAGGGTTCTaGTGGTCATCAAGAACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISCSMRTHLATATGVVKIIRRGF*WSSRTF Trigger: AAAGGTTCTTGATGACCATCAGAACCCTCGCCTGAT...TATTTTCACAACCCCAGTGGCTGTGGCCAAATGAGTCCTCATTGAACACGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR TCA 90 bp | CAAGGATCAACTGTTTTGTTCTTCATCCCAATTACTGTAGGATGGAAAACTGTCTTACCTGGCCCAGGGTaGCAATGTCCCAGCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGSTVLFFIPITVGWKTVLPGPG*QCPSHL Trigger: CAGATGGCTGGGACATTGTCACCCTGGGCCAGGTAA...GACAGTTTTCCATCCTACAGTAATTGGGATGAAGAACAAAACAGTTGATCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR GCA 90 bp | TGGCGGGTACTCTTTCCCGTTTTCTCCCCTCTCTGTTTAAGATGCGGACGAACAAAATGTCTACAAAACTaGTGCTCAGCAAAGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: WRVLFPVFSPLCLRCGRTKCLQN*CSAKWY Trigger: GTACCACTTTGCTGAGCAGCAGTTTTGTAGACATTT...TGTTCGTCCGCATCTTAAACAGAGAGGGGAGAAAACGGGAAAGAGTACCCGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000210280.2 |
||
| CDS-3UTR GCA 90 bp | CATGGCTCATCACTTTACCCAGGAAAGGAATTTCTACAAGAGAACTTCAGCCTCAAGAGGTCAATGAAGTaGTCCGGAGACACAGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HGSSLYPGKEFLQENFSLKRSMK*SGDTGV Trigger: CACTCCTGTGTCTCCGGAGCACTTCATTGACCTCTT...GAGGCTGAAGTTCTCTTGTAGAAATTCCTTTCCTGGGTAAAGTGATGAGCCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR CCA 90 bp | ATCTCGTGTTCAATGAGGACTCATTTGGCCACAGCCACTGGGGTTGTGAAAATACTCAGTGAGGTTAACTaGGACTTCGCAATTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISCSMRTHLATATGVVKILSEVN*DFAISC Trigger: GCAGCTAATTGCGAAGTCCCAGTTAACCTCACTGAG...TATTTTCACAACCCCAGTGGCTGTGGCCAAATGAGTCCTCATTGAACACGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR TCA 90 bp | ATAAACATGGCTCATCACTTTACCCAGGAAAGGAATTTCTACAAGAGAACTTCATTACCTGGCCCAGGGTaGCAATGTCCCAGCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: INMAHHFTQERNFYKRTSLPGPG*QCPSHL Trigger: CAGATGGCTGGGACATTGTCACCCTGGGCCAGGTAA...TGAAGTTCTCTTGTAGAAATTCCTTTCCTGGGTAAAGTGATGAGCCATGTTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGATCAACTGTTTTGTTCTTCATCCCAATTACTGTAGGATGGAAAACTGTCAAGAGGATGCTGCAGTaGCGGCAGAAGTGTAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: QGSTVLFFIPITVGWKTVKRMLQ*RQKCSV Trigger: CACGCTACACTTCTGCCGCCACTGCAGCATCCTCTT...GACAGTTTTCCATCCTACAGTAATTGGGATGAAGAACAAAACAGTTGATCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR GCA 90 bp | CATCTCGTGTTCAATGAGGACTCATTTGGCCACAGCCACTGGGGTTGTGAAAATCTTCCTCTTTTTGGCTaGGTATTCACACTCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HLVFNEDSFGHSHWGCENLPLFG*VFTLIV Trigger: AACAATGAGTGTGAATACGCAGCCAAAAAGAGGAAG...ATTTTCACAACCCCAGTGGCTGTGGCCAAATGAGTCCTCATTGAACACGAGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| 3UTR CAA 72 bp | ATTCCTAGCTCCATCTCGTGTTCAATGAGGACTCATTaGGCCACAGCCACTGGGGTTGTGAAAATACATTTT | + |
|
Preference number: 4 (lower is better) Translates to: IPSSISCSMRTH*ATATGVVKIHF Trigger: AAAATGTATTTTCACAACCCCAGTGGCTGTGGCCAAATGAGTCCTCATTGAACACGAGATGGAGCTAGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR GCA 90 bp | ATCTCGTGTTCAATGAGGACTCATTTGGCCACAGCCACTGGGGTTGTGAAAATACTTCCTCTTTTTGGCTaGGTATTCACACTCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ISCSMRTHLATATGVVKILPLFG*VFTLIV Trigger: AACAATGAGTGTGAATACGCAGCCAAAAAGAGGAAG...TATTTTCACAACCCCAGTGGCTGTGGCCAAATGAGTCCTCATTGAACACGAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR GCA 90 bp | CATGGCTCATCACTTTACCCAGGAAAGGAATTTCTACAAGAGAACTTCAGCCTCCATGCCTTTCCTTTGTaGTTTCCTTATGGACGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: HGSSLYPGKEFLQENFSLHAFPL*FPYGRR Trigger: TCTACGTCCATAAGGAAAGCACAAAGGAAAGGCATG...GAGGCTGAAGTTCTCTTGTAGAAATTCCTTTCCTGGGTAAAGTGATGAGCCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR GCA 90 bp | CATCCCAATTACTGTAGGATGGAAAACTGTCTTTTGACAACCAAGAAGGACATTAGGCCAGTGTTTACCTaGTTTGTCACCTGGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HPNYCRMENCLLTTKKDIRPVFT*FVTWRF Trigger: GAACCTCCAGGTGACAAAGCAGGTAAACACTGGCCT...AATGTCCTTCTTGGTTGTCAAAAGACAGTTTTCCATCCTACAGTAATTGGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043520.5 |
||
| CDS-3UTR GCA 90 bp | ATCTCGTGTTCAATGAGGACTCATTTGGCCACAGCCACTGGGGTTGTGAAAATAAAATGTCTACAAAACTaGTGCTCAGCAAAGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ISCSMRTHLATATGVVKIKCLQN*CSAKWY Trigger: GTACCACTTTGCTGAGCAGCAGTTTTGTAGACATTT...TATTTTCACAACCCCAGTGGCTGTGGCCAAATGAGTCCTCATTGAACACGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR GCA 90 bp | ATAAACATGGCTCATCACTTTACCCAGGAAAGGAATTTCTACAAGAGAACTTCATCCAGAAGAGGATGCTaGAGTGGCGGCAGAAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: INMAHHFTQERNFYKRTSSRRGC*SGGRSV Trigger: TACACTTCTGCCGCCACTGCAGCATCCTCTTCTGGA...TGAAGTTCTCTTGTAGAAATTCCTTTCCTGGGTAAAGTGATGAGCCATGTTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| 3UTR CAA 72 bp | CTTCATCCCAATTACTGTAGGATGGAAAACTGTCTTTaGACAACCAAGAAGGACATTCTCGGTTGTTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: LHPNYCRMENCL*TTKKDILGCSC Trigger: ACATGAACAACCGAGAATGTCCTTCTTGGTTGTCAAAAGACAGTTTTCCATCCTACAGTAATTGGGATGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS-3UTR CCA 90 bp | CATCCCAATTACTGTAGGATGGAAAACTGTCTTTTGACAACCAAGAAGGACATTTTTAAGATAATGCTGTaGTTGATGGTGTACTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: HPNYCRMENCLLTTKKDIFKIML*LMVYWL Trigger: TAGCCAGTACACCATCAACCACAGCATTATCTTAAA...AATGTCCTTCTTGGTTGTCAAAAGACAGTTTTCCATCCTACAGTAATTGGGATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
||
| CDS GCA 90 bp | GAAGTGCTCCGGAGACACAGGAGTGAAGCAGCTGTCGGGGTCAGCTaGGGTGCAGGGGTGTCCCGAGTCCTTCCAGAAGAGGATGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: EVLRRHRSEAAVGVS*GAGVSRVLPEEDAA Trigger: TGCAGCATCCTCTTCTGGAAGGACTCGGGACACCCCTGCACCGCAGCTGACCCCGACAGCTGCTTCACTCCTGTGTCTCCGGAGCACTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043520.5 |
||
| CDS GCA 90 bp | GAAGTGCTCCGGAGACACAGGAGTGAAGCAGCTGTCGGGGTCAGCTaGGGTGCAGGGGTGTCCCGAGTCCTTCAACAACCAAGCAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EVLRRHRSEAAVGVS*GAGVSRVLQQPSKV Trigger: CACCTTGCTTGGTTGTTGAAGGACTCGGGACACCCCTGCACCGCAGCTGACCCCGACAGCTGCTTCACTCCTGTGTCTCCGGAGCACTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209913.2 |
||
| CDS GCA 90 bp | TCACTGAGTGTGAGGCCAGTGTTTACCTTTGTCACCTGGAGGTTCTaGAGCTGCTGCTGCCAGCTGAGGACGGTCTCCAGGCGGCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: SLSVRPVFTFVTWRF*SCCCQLRTVSRRQI Trigger: GATCTGCCGCCTGGAGACCGTCCTCAGCTGGCAGCAGCAGCTGCAGAACCTCCAGGTGACAAAGGTAAACACTGGCCTCACACTCAGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209913.2 |
||
| CDS GCA 90 bp | AGGCCAGTGTTTACCTTTGTCACCTGGAGGTTCTGCAGCTGCTGCTaGCAGCTGAGGACGGTCTCCAGGCGGCAGATCCAGATGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: RPVFTFVTWRFCSCC*QLRTVSRRQIQMLM Trigger: CATCAACATCTGGATCTGCCGCCTGGAGACCGTCCTCAGCTGGCAGCAGCAGCTGCAGAACCTCCAGGTGACAAAGGTAAACACTGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209913.2 |
||
| CDS TCA 90 bp | CAGGGTTGGTGTTACCTGGCCCAGGGTGACAATGTCCCAGCCATCTaGGAAACGGTACAGGATGTTGTTCAGCATGTGCAGGGGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QGWCYLAQGDNVPAI*ETVQDVVQHVQGQV Trigger: GACCTGCCCCTGCACATGCTGAACAACATCCTGTACCGTTTCTCAGATGGCTGGGACATTGTCACCCTGGGCCAGGTAACACCAACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 ENSMUST00000210280.2 |
||
| CDS CCA 90 bp | CACAGCCGCCTGTCTTCACTGAGCATGTACAGGGTTGGTGTTACCTaGCCCAGGGTGACAATGTCCCAGCCATCTGAGAAACGGTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: HSRLSSLSMYRVGVT*PRVTMSQPSEKRYR Trigger: CCTGTACCGTTTCTCAGATGGCTGGGACATTGTCACCCTGGGCCAGGTAACACCAACCCTGTACATGCTCAGTGAAGACAGGCGGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 ENSMUST00000210280.2 |
||
| CDS TCA 90 bp | TCACCAGGATGCCAAGGGTGGAGCTCAGGTCCTGGAGGAGGCCTTTaGTCAGGCGAGGGTTCTGATGGTCATCAAGAACCTTTTGGACGA | + |
|
Preference number: 5 (lower is better) Translates to: SPGCQGWSSGPGGGL*SGEGSDGHQEPFGR Trigger: TCGTCCAAAAGGTTCTTGATGACCATCAGAACCCTCGCCTGATCAAAGGCCTCCTCCAGGACCTGAGCTCCACCCTTGGCATCCTGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 ENSMUST00000210280.2 |
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| CDS-3UTR CAA 90 bp | AGCGTCCTGTCAGGTTCTCCAAGGAGCAAGCGAGGGTTGCACAGGTACAGGCAGCAGTGTTTACCTGCTTaGTCACCTGGAGGTTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: SVLSGSPRSKRGLHRYRQQCLPA*SPGGSA Trigger: TGCAGAACCTCCAGGTGACAAAGCAGGTAAACACTG...CTGCCTGTACCTGTGCAACCCTCGCTTGCTCCTTGGAGAACCTGACAGGACGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043520.5 |
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| CDS GCA 90 bp | AGTCCTTCAACAACCAAGCAAGGTGGTAGTCCTTCCAGAAGAGGATaGTGCAGTGGCGGCAGAAGTGTAGCGTGTCCCCGTACTGCTCTT | + |
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Preference number: 5 (lower is better) Translates to: SPSTTKQGGSPSRRG*CSGGRSVACPRTAL Trigger: AAGAGCAGTACGGGGACACGCTACACTTCTGCCGCCACTGCAGCATCCTCTTCTGGAAGGACTACCACCTTGCTTGGTTGTTGAAGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209913.2 |
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| CDS-3UTR CAA 90 bp | TATACCTGTGTGCCCCCACCTCCGCTCCCAGTGTCTAGCAGAACGCTTTCAGTAAAACGGTACAGGATGTaGTTCAGCATGTGCAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: YTCVPPPPLPVSSRTLSVKRYRM*FSMCRG Trigger: GCCCCTGCACATGCTGAACAACATCCTGTACCGTTT...TACTGAAAGCGTTCTGCTAGACACTGGGAGCGGAGGTGGGGGCACACAGGTATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000210280.2 |
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| CDS-3UTR CAA 90 bp | TCCATCTCGTGTTCAATGAGGACTCATTTGGCCACAGCCACTGGGGTTGTGAAAGGCCAGTGTTTACCTTaGTCACCTGGAGGTTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: SISCSMRTHLATATGVVKGQCLP*SPGGSA Trigger: TGCAGAACCTCCAGGTGACAAAGGTAAACACTGGCC...TTTCACAACCCCAGTGGCTGTGGCCAAATGAGTCCTCATTGAACACGAGATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209913.2 |
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| CDS-3UTR CAA 90 bp | ATCTCGTGTTCAATGAGGACTCATTTGGCCACAGCCACTGGGGTTGTGAAAATAAAACGGTACAGGATGTaGTTCAGCATGTGCAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: ISCSMRTHLATATGVVKIKRYRM*FSMCRG Trigger: GCCCCTGCACATGCTGAACAACATCCTGTACCGTTT...TATTTTCACAACCCCAGTGGCTGTGGCCAAATGAGTCCTCATTGAACACGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| CDS-3UTR CAA 90 bp | AGGAAAGGAATTTCTACAAGAGAACTTCAGCCTCACTGGGCTGTTTCCAGCTCCAGCCATGCCTTTCCTTaGTGCTTTCCTTATGGACGT | + |
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Preference number: 5 (lower is better) Translates to: RKGISTRELQPHWAVSSSSHAFP*CFPYGR Trigger: ACGTCCATAAGGAAAGCACAAAGGAAAGGCATGGCT...GGAGCTGGAAACAGCCCAGTGAGGCTGAAGTTCTCTTGTAGAAATTCCTTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| CDS-3UTR CAA 90 bp | CATGGCTCATCACTTTACCCAGGAAAGGAATTTCTACAAGAGAACTTCAGCCTCAAACGGTACAGGATGTaGTTCAGCATGTGCAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: HGSSLYPGKEFLQENFSLKRYRM*FSMCRG Trigger: GCCCCTGCACATGCTGAACAACATCCTGTACCGTTT...GAGGCTGAAGTTCTCTTGTAGAAATTCCTTTCCTGGGTAAAGTGATGAGCCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| CDS-3UTR CAA 90 bp | CATCTCGTGTTCAATGAGGACTCATTTGGCCACAGCCACTGGGGTTGTGAAAATTCCTTCTTCCTCTTTTaGGCTGCGTATTCACACTCA | + |
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Preference number: 5 (lower is better) Translates to: HLVFNEDSFGHSHWGCENSFFLF*AAYSHS Trigger: TGAGTGTGAATACGCAGCCAAAAAGAGGAAGAAGGA...ATTTTCACAACCCCAGTGGCTGTGGCCAAATGAGTCCTCATTGAACACGAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| CDS-3UTR CAA 90 bp | AGGAAAGGAATTTCTACAAGAGAACTTCAGCCTCACTGGGCTGTTTCCAGCTCCTCCTTCTTCCTCTTTTaGGCTGCGTATTCACACTCA | + |
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Preference number: 5 (lower is better) Translates to: RKGISTRELQPHWAVSSSSFFLF*AAYSHS Trigger: TGAGTGTGAATACGCAGCCAAAAAGAGGAAGAAGGA...GGAGCTGGAAACAGCCCAGTGAGGCTGAAGTTCTCTTGTAGAAATTCCTTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| CDS-3UTR CAA 90 bp | CATCCCAATTACTGTAGGATGGAAAACTGTCTTTTGACAACCAAGAAGGACATTAGCCATGCCTTTCCTTaGTGCTTTCCTTATGGACGT | + |
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Preference number: 5 (lower is better) Translates to: HPNYCRMENCLLTTKKDISHAFP*CFPYGR Trigger: ACGTCCATAAGGAAAGCACAAAGGAAAGGCATGGCT...AATGTCCTTCTTGGTTGTCAAAAGACAGTTTTCCATCCTACAGTAATTGGGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| CDS TCA 90 bp | CTGAAGCGTGAAATACATCAGCTTCCACTCGATATGACCTTTTTCTaGAAGGATCAAATGTCTACAAAACTGCTGCTCAGCAAAGTGGTA | + |
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Preference number: 5 (lower is better) Translates to: LKREIHQLPLDMTFF*KDQMSTKLLLSKVV Trigger: TACCACTTTGCTGAGCAGCAGTTTTGTAGACATTTGATCCTTTCAGAAAAAGGTCATATCGAGTGGAAGCTGATGTATTTCACGCTTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 ENSMUST00000210280.2 |
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| CDS GCA 72 bp | CGGAGACACAGGAGTGAAGCAGCTGTCGGGGTCAGCTaGGGTGCAGGGGTGTCCCGAGTCCTTCCAGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: RRHRSEAAVGVS*GAGVSRVLPEE Trigger: CTCTTCTGGAAGGACTCGGGACACCCCTGCACCGCAGCTGACCCCGACAGCTGCTTCACTCCTGTGTCTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043520.5 |
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| CDS GCA 72 bp | CGACTAGCACTGACTTCCCCACCCCTCTCACCAGGATaGCAAGGGTGGAGCTCAGGTCCTGGAGGAGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: RLALTSPPLSPG*QGWSSGPGGGL Trigger: AAGGCCTCCTCCAGGACCTGAGCTCCACCCTTGGCATCCTGGTGAGAGGGGTGGGGAAGTCAGTGCTAGTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 ENSMUST00000210280.2 |
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| CDS GCA 72 bp | ACCTGCTTTGTCACCTGGAGGTTCTGCAGCTGCTGCTaGCAGCTGAGGACGGTCTCCAGGCGGCAGATCCAG | + |
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Preference number: 6 (lower is better) Translates to: TCFVTWRFCSCC*QLRTVSRRQIQ Trigger: CTGGATCTGCCGCCTGGAGACCGTCCTCAGCTGGCAGCAGCAGCTGCAGAACCTCCAGGTGACAAAGCAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000210280.2 |
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| CDS CAA 90 bp | TGCTGCTGCCAGCTGAGGACGGTCTCCAGGCGGCAGATCCAGATGTaGATGTTCCCGACTAGCACTGACTTCCCCACCCCTCTCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: CCCQLRTVSRRQIQM*MFPTSTDFPTPLTR Trigger: CCTGGTGAGAGGGGTGGGGAAGTCAGTGCTAGTCGGGAACATCAACATCTGGATCTGCCGCCTGGAGACCGTCCTCAGCTGGCAGCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 ENSMUST00000210280.2 |
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| CDS GCA 72 bp | TGCAGGGGTGTCCCGAGTCCTTCCAGAAGAGGATGCTaGAGTGGCGGCAGAAGTGTAGCGTGTCCCCGTACT | + |
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Preference number: 6 (lower is better) Translates to: CRGVPSPSRRGC*SGGRSVACPRT Trigger: AGTACGGGGACACGCTACACTTCTGCCGCCACTGCAGCATCCTCTTCTGGAAGGACTCGGGACACCCCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043520.5 |
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| CDS CCA 72 bp | GGGTGTCCCGAGTCCTTCCAGAAGAGGATGCTGCAGTaGCGGCAGAAGTGTAGCGTGTCCCCGTACTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GCPESFQKRMLQ*RQKCSVSPYCS Trigger: AGAGCAGTACGGGGACACGCTACACTTCTGCCGCCACTGCAGCATCCTCTTCTGGAAGGACTCGGGACACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043520.5 |
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| CDS GCA 72 bp | TTTACCTGCTTTGTCACCTGGAGGTTCTGCAGCTGCTaGTGCCAGCTGAGGACGGTCTCCAGGCGGCAGATC | + |
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Preference number: 6 (lower is better) Translates to: FTCFVTWRFCSC*CQLRTVSRRQI Trigger: GATCTGCCGCCTGGAGACCGTCCTCAGCTGGCAGCAGCAGCTGCAGAACCTCCAGGTGACAAAGCAGGTAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000210280.2 |
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| CDS GCA 72 bp | AGGCCAGTGTTTACCTGCTTTGTCACCTGGAGGTTCTaGAGCTGCTGCTGCCAGCTGAGGACGGTCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: RPVFTCFVTWRF*SCCCQLRTVSR Trigger: CCTGGAGACCGTCCTCAGCTGGCAGCAGCAGCTGCAGAACCTCCAGGTGACAAAGCAGGTAAACACTGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000210280.2 |
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| CDS GCA 72 bp | TTTACCTTTGTCACCTGGAGGTTCTGCAGCTGCTGCTaGCAGCTGAGGACGGTCTCCAGGCGGCAGATCCAG | + |
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Preference number: 6 (lower is better) Translates to: FTFVTWRFCSCC*QLRTVSRRQIQ Trigger: CTGGATCTGCCGCCTGGAGACCGTCCTCAGCTGGCAGCAGCAGCTGCAGAACCTCCAGGTGACAAAGGTAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209913.2 |
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| CDS GCA 72 bp | GTGTTTACCTTTGTCACCTGGAGGTTCTGCAGCTGCTaGTGCCAGCTGAGGACGGTCTCCAGGCGGCAGATC | + |
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Preference number: 6 (lower is better) Translates to: VFTFVTWRFCSC*CQLRTVSRRQI Trigger: GATCTGCCGCCTGGAGACCGTCCTCAGCTGGCAGCAGCAGCTGCAGAACCTCCAGGTGACAAAGGTAAACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209913.2 |
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| CDS CAA 72 bp | CAGCTGAGGACGGTCTCCAGGCGGCAGATCCAGATGTaGATGTTCCCGACTAGCACTGACTTCCCCACCCCT | + |
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Preference number: 6 (lower is better) Translates to: QLRTVSRRQIQM*MFPTSTDFPTP Trigger: AGGGGTGGGGAAGTCAGTGCTAGTCGGGAACATCAACATCTGGATCTGCCGCCTGGAGACCGTCCTCAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 ENSMUST00000210280.2 |
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| CDS GCA 72 bp | GTCGGCCTGAAGTCCTTACCTTCCAGAAGAGGATGCTaGAGTGGCGGCAGAAGTGTAGCGTGTCCCCGTACT | + |
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Preference number: 6 (lower is better) Translates to: VGLKSLPSRRGC*SGGRSVACPRT Trigger: AGTACGGGGACACGCTACACTTCTGCCGCCACTGCAGCATCCTCTTCTGGAAGGTAAGGACTTCAGGCCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210280.2 |
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| CDS TCA 72 bp | TGCCAAGGGTGGAGCTCAGGTCCTGGAGGAGGCCTTTaGTCAGGCGAGGGTTCTGATGGTCATCAAGAACCT | + |
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Preference number: 6 (lower is better) Translates to: CQGWSSGPGGGL*SGEGSDGHQEP Trigger: AGGTTCTTGATGACCATCAGAACCCTCGCCTGATCAAAGGCCTCCTCCAGGACCTGAGCTCCACCCTTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 ENSMUST00000210280.2 |
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| CDS GCA 72 bp | ACCAAGCAAGGTGGTAGTCCTTCCAGAAGAGGATGCTaGAGTGGCGGCAGAAGTGTAGCGTGTCCCCGTACT | + |
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Preference number: 6 (lower is better) Translates to: TKQGGSPSRRGC*SGGRSVACPRT Trigger: AGTACGGGGACACGCTACACTTCTGCCGCCACTGCAGCATCCTCTTCTGGAAGGACTACCACCTTGCTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209913.2 |
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| CDS CCA 72 bp | CCTGAAGTCCTTACCTTCCAGAAGAGGATGCTGCAGTaGCGGCAGAAGTGTAGCGTGTCCCCGTACTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: PEVLTFQKRMLQ*RQKCSVSPYCS Trigger: AGAGCAGTACGGGGACACGCTACACTTCTGCCGCCACTGCAGCATCCTCTTCTGGAAGGTAAGGACTTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210280.2 |
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| CDS CCA 72 bp | TCACTGAGTGTGAGGCCAGTGTTTACCTTTGTCACCTaGAGGTTCTGCAGCTGCTGCTGCCAGCTGAGGACG | + |
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Preference number: 6 (lower is better) Translates to: SLSVRPVFTFVT*RFCSCCCQLRT Trigger: CGTCCTCAGCTGGCAGCAGCAGCTGCAGAACCTCCAGGTGACAAAGGTAAACACTGGCCTCACACTCAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209913.2 |
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| CDS TCA 72 bp | TGTTACCTGGCCCAGGGTGACAATGTCCCAGCCATCTaGGAAACGGTACAGGATGTTGTTCAGCATGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: CYLAQGDNVPAI*ETVQDVVQHVQ Trigger: CTGCACATGCTGAACAACATCCTGTACCGTTTCTCAGATGGCTGGGACATTGTCACCCTGGGCCAGGTAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 ENSMUST00000210280.2 |
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| CDS CCA 72 bp | CCACTATTTAAGATAATGCTGTGGTTGATGGTGTACTaGCTATCCTCGCTCCTGAGCTCGTGGCTACAGGGG | + |
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Preference number: 6 (lower is better) Translates to: PLFKIMLWLMVY*LSSLLSSWLQG Trigger: CCCCTGTAGCCACGAGCTCAGGAGCGAGGATAGCCAGTACACCATCAACCACAGCATTATCTTAAATAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| CDS TCA 72 bp | AAATGTCTACAAAACTGCTGCTCAGCAAAGTGGTACTaGCACAGTCGCTTCCACAGCCGCCTGTCTTCACTG | + |
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Preference number: 6 (lower is better) Translates to: KCLQNCCSAKWY*HSRFHSRLSSL Trigger: CAGTGAAGACAGGCGGCTGTGGAAGCGACTGTGTCAGTACCACTTTGCTGAGCAGCAGTTTTGTAGACATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 ENSMUST00000210280.2 |
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| CDS CAA 72 bp | ATTTCTTCTTCACCACTATTTAAGATAATGCTGTGGTaGATGGTGTACTGGCTATCCTCGCTCCTGAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: ISSSPLFKIMLW*MVYWLSSLLSS Trigger: CGAGCTCAGGAGCGAGGATAGCCAGTACACCATCAACCACAGCATTATCTTAAATAGTGGTGAAGAAGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 |
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| CDS TCA 72 bp | CGTACTGCTCTTTGGTCGGGTAATACTTCTGAAGCGTaGAATACATCAGCTTCCACTCGATATGACCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: RTALWSGNTSEA*NTSASTRYDLF Trigger: AAAAAGGTCATATCGAGTGGAAGCTGATGTATTTCACGCTTCAGAAGTATTACCCGACCAAAGAGCAGTACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043520.5 ENSMUST00000209913.2 ENSMUST00000210280.2 |
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