Pregenerated sensors for FBXO24 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000089984Ensembl transcript IDs: ENSMUST00000031732.14, ENSMUST00000111002.8, ENSMUST00000136028.2
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCATGCAGGTCACACGCAGGTGAGGCAGGCATCGAGACACCTTCCTaGGGGCTAACTGCACTGTATAGGAGCGTGGCTGGTCCAGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: PCRSHAGEAGIETPS*GLTALYRSVAGPAG Trigger: CCCAGCTGGACCAGCCACGCTCCTATACAGTGCAGTTAGCCCTCAGGAAGGTGTCTCGATGCCTGCCTCACCTGCGTGTGACCTGCATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
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| 3UTR TCA 90 bp | TCTTCTCCATTCGGTCCTGCAACGTGGGGCAACTGTGGATCTGGCTaGGGTACTCCTCACAGGCCTGGGCTGTTCCCCCAGGGTCTTGGG | + |
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Preference number: 1 (lower is better) Translates to: SSPFGPATWGNCGSG*GTPHRPGLFPQGLG Trigger: CCCAAGACCCTGGGGGAACAGCCCAGGCCTGTGAGGAGTACCTCAGCCAGATCCACAGTTGCCCCACGTTGCAGGACCGAATGGAGAAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
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| 3UTR CCA 90 bp | TTCATCTTCTCCATTCGGTCCTGCAACGTGGGGCAACTGTGGATCTaGCTGAGGTACTCCTCACAGGCCTGGGCTGTTCCCCCAGGGTCT | + |
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Preference number: 1 (lower is better) Translates to: FIFSIRSCNVGQLWI*LRYSSQAWAVPPGS Trigger: AGACCCTGGGGGAACAGCCCAGGCCTGTGAGGAGTACCTCAGCCAGATCCACAGTTGCCCCACGTTGCAGGACCGAATGGAGAAGATGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
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| 3UTR CCA 90 bp | GGCACTGTTCGATGTCGTGGCTGGACAGCATATAGAGACACTCTCTaGTGGAGCAGAGGGAGCAGGCACACAAAGGGACCTGTGTGGGCT | + |
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Preference number: 1 (lower is better) Translates to: GTVRCRGWTAYRDTL*WSRGSRHTKGPVWA Trigger: AGCCCACACAGGTCCCTTTGTGTGCCTGCTCCCTCTGCTCCACCAGAGAGTGTCTCTATATGCTGTCCAGCCACGACATCGAACAGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
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| 3UTR CCA 90 bp | TGGCTGGCAGGTCTCGATAGACAGGGCACTGTTCGATGTCGTGGCTaGACAGCATATAGAGACACTCTCTGGTGGAGCAGAGGGAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: WLAGLDRQGTVRCRG*TAYRDTLWWSRGSR Trigger: CCTGCTCCCTCTGCTCCACCAGAGAGTGTCTCTATATGCTGTCCAGCCACGACATCGAACAGTGCCCTGTCTATCGAGACCTGCCAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
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| 3UTR CCA 90 bp | GCAGCCCTCTGCAACATGTCCAGTGCCTCCCAGAAGAAATCTTTCTaGGCAGCCATCAAGGGCATCCAGCCCACAATCTCCTTCATCTTC | + |
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Preference number: 1 (lower is better) Translates to: AALCNMSSASQKKSF*AAIKGIQPTISFIF Trigger: GAAGATGAAGGAGATTGTGGGCTGGATGCCCTTGATGGCTGCCCAGAAAGATTTCTTCTGGGAGGCACTGGACATGTTGCAGAGGGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
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| 3UTR-3UTR CCA 90 bp | CATTCGGTCCTGCAACGTGGGGCAACTGTGGATCTGGCTGAGGTACTCCTCACACCCCACCCTGCTGGCTaGCAGGTCTCGATAGACAGG | + |
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Preference number: 2 (lower is better) Translates to: HSVLQRGATVDLAEVLLTPHPAG*QVSIDR Trigger: CCTGTCTATCGAGACCTGCCAGCCAGCAGGGTGGGG...TGTGAGGAGTACCTCAGCCAGATCCACAGTTGCCCCACGTTGCAGGACCGAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
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| 3UTR-3UTR GCA 90 bp | TCAAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTTCGAATACGCAGCACTaGTCCCCACAGCCCCACCCC | + |
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Preference number: 2 (lower is better) Translates to: SNFSLMIVRLGAPPGQAPSNTQH*SPQPHP Trigger: GGGGTGGGGCTGTGGGGAGCAGTGCTGCGTATTCGA...AGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 ENSMUST00000136028.2 |
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| 3UTR-3UTR GCA 90 bp | CCATCAAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCTCGAATACGCAGCACTaGTCCCCACAGCCCCACCCC | + |
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Preference number: 2 (lower is better) Translates to: PSNFSLMIVRLGAPPGQASNTQH*SPQPHP Trigger: GGGGTGGGGCTGTGGGGAGCAGTGCTGCGTATTCGA...GGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTTGATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 ENSMUST00000136028.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTGCACATTTATAAAAGAGGTCCCTCCTCTCCCCTCGAATACGCAGCACTGCCAGGTCACACGCAGGTaGGGCAGGCATCGAGACACC | + |
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Preference number: 2 (lower is better) Translates to: PCTFIKEVPPLPSNTQHCQVTRR*GRHRDT Trigger: GGTGTCTCGATGCCTGCCTCACCTGCGTGTGACCTG...GCAGTGCTGCGTATTCGAGGGGAGAGGAGGGACCTCTTTTATAAATGTGCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
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| 3UTR-3UTR CCA 90 bp | TCCATTCGGTCCTGCAACGTGGGGCAACTGTGGATCTGGCTGAGGTACTCCTCACACTGTATAGGAGCGTaGCTGGTCCAGCTGGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: SIRSCNVGQLWIWLRYSSHCIGA*LVQLGL Trigger: GAGACCCAGCTGGACCAGCCACGCTCCTATACAGTG...TGAGGAGTACCTCAGCCAGATCCACAGTTGCCCCACGTTGCAGGACCGAATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
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| 3UTR-3UTR CCA 90 bp | AAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCGGGTACTGCTCTGGTTaGAAGCCATGCAGGTCACAC | + |
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Preference number: 2 (lower is better) Translates to: KFLAHDSQVRGSSRAGPCGYCSG*KPCRSH Trigger: GTGTGACCTGCATGGCTTCCAACCAGAGCAGTACCC...GCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCTCCATTCGGTCCTGCAACGTGGGGCAACTGTGGATCTGGCTGAGGTACTCCACAGAAGAGGACCTTaGCAGGCAAGGAGAGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: LLHSVLQRGATVDLAEVLHRRGP*QARREP Trigger: TGGCTCTCTCCTTGCCTGCCAAGGTCCTCTTCTGTG...GAGTACCTCAGCCAGATCCACAGTTGCCCCACGTTGCAGGACCGAATGGAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTGGCTGGCAGGTCTCGATAGACAGGGCACTGTTCGATGTCGTGGCTGGACATATAGAGACACTCTCTaGTGGAGCAGAGGGAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: CWLAGLDRQGTVRCRGWTYRDTL*WSRGSR Trigger: CCTGCTCCCTCTGCTCCACCAGAGAGTGTCTCTATA...TGTCCAGCCACGACATCGAACAGTGCCCTGTCTATCGAGACCTGCCAGCCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
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| 3UTR-3UTR GCA 90 bp | CATCTACCAGGCCAAGATGATTATAGCCAAGAGCACAGAAGAGGACCTTGGCAGTCGAATACGCAGCACTaGTCCCCACAGCCCCACCCC | + |
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Preference number: 2 (lower is better) Translates to: HLPGQDDYSQEHRRGPWQSNTQH*SPQPHP Trigger: GGGGTGGGGCTGTGGGGAGCAGTGCTGCGTATTCGA...CTGCCAAGGTCCTCTTCTGTGCTCTTGGCTATAATCATCTTGGCCTGGTAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTTTCTGGGCAGCCATCAAGGGCATCCAGCCCACAATCTCCTTCATCTTCTCAGAGACACTCTCTGGTaGAGCAGAGGGAGCAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: IFLGSHQGHPAHNLLHLLRDTLW*SRGSRH Trigger: GTGCCTGCTCCCTCTGCTCCACCAGAGAGTGTCTCT...GAGAAGATGAAGGAGATTGTGGGCTGGATGCCCTTGATGGCTGCCCAGAAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
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| 3UTR-3UTR TCA 90 bp | AAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACACACAGTGTTCTCTaGCACTCCATCTCTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: KFLAHDSQVRGSSRAGPCTHSVL*HSISSQ Trigger: CTGAGAAGAGATGGAGTGTCAGAGAACACTGTGTGT...GCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 ENSMUST00000136028.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTTTCTGGGCAGCCATCAAGGGCATCCAGCCCACAATCTCCTTCATCTTCTCACAAAGGGACCTGTGTaGGCTCCCCTCGGTCCATTT | + |
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Preference number: 2 (lower is better) Translates to: IFLGSHQGHPAHNLLHLLTKGPV*APLGPF Trigger: AAATGGACCGAGGGGAGCCCACACAGGTCCCTTTGT...GAGAAGATGAAGGAGATTGTGGGCTGGATGCCCTTGATGGCTGCCCAGAAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCAAATTCATCTACCAGGCCAAGATGATTATAGCCAAGAGCACAGAAGAGGACAAGGAGAGAGCCAGTaGCATCTGGTGGTCCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: GQIHLPGQDDYSQEHRRGQGESQ*HLVVQG Trigger: CCCCTGGACCACCAGATGCCACTGGCTCTCTCCTTG...TCCTCTTCTGTGCTCTTGGCTATAATCATCTTGGCCTGGTAGATGAATTTGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTTTCTGGGCAGCCATCAAGGGCATCCAGCCCACAATCTCCTTCATCTTCTCACACACAGTGTTCTCTaGCACTCCATCTCTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: IFLGSHQGHPAHNLLHLLTHSVL*HSISSQ Trigger: CTGAGAAGAGATGGAGTGTCAGAGAACACTGTGTGT...GAGAAGATGAAGGAGATTGTGGGCTGGATGCCCTTGATGGCTGCCCAGAAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
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| 3UTR-3UTR GCA 90 bp | CATCTACCAGGCCAAGATGATTATAGCCAAGAGCACAGAAGAGGACCTTGGCAGTCCAGGGCAGGCCCCTaGACATTTATAAAAGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: HLPGQDDYSQEHRRGPWQSRAGP*TFIKEV Trigger: GACCTCTTTTATAAATGTGCAGGGGCCTGCCCTGGA...CTGCCAAGGTCCTCTTCTGTGCTCTTGGCTATAATCATCTTGGCCTGGTAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
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| 3UTR-3UTR GCA 90 bp | GACAGGGCACTGTTCGATGTCGTGGCTGGACAGCATATAGAGACACTCTCTGGTTATCTGTTATTTCCCTaGATAAAGATCCGGCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: DRALFDVVAGQHIETLSGYLLFP*IKIRPN Trigger: ATTTGGCCGGATCTTTATGCAGGGAAATAACAGATA...ACCAGAGAGTGTCTCTATATGCTGTCCAGCCACGACATCGAACAGTGCCCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
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| 3UTR TCA 72 bp | TTCGGTCCTGCAACGTGGGGCAACTGTGGATCTGGCTaGGGTACTCCTCACAGGCCTGGGCTGTTCCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: FGPATWGNCGSG*GTPHRPGLFPQ Trigger: CTGGGGGAACAGCCCAGGCCTGTGAGGAGTACCTCAGCCAGATCCACAGTTGCCCCACGTTGCAGGACCGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
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| 3UTR TCA 72 bp | CTGCTCTGGTTGGAAGCCATGCAGGTCACACGCAGGTaGGGCAGGCATCGAGACACCTTCCTGAGGGCTAAC | + |
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Preference number: 3 (lower is better) Translates to: LLWLEAMQVTRR*GRHRDTFLRAN Trigger: GTTAGCCCTCAGGAAGGTGTCTCGATGCCTGCCTCACCTGCGTGTGACCTGCATGGCTTCCAACCAGAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
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| 3UTR TCA 72 bp | TCACACGCAGGTGAGGCAGGCATCGAGACACCTTCCTaGGGGCTAACTGCACTGTATAGGAGCGTGGCTGGT | + |
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Preference number: 3 (lower is better) Translates to: SHAGEAGIETPS*GLTALYRSVAG Trigger: ACCAGCCACGCTCCTATACAGTGCAGTTAGCCCTCAGGAAGGTGTCTCGATGCCTGCCTCACCTGCGTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
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| 3UTR-3UTR CAA 90 bp | CTTCTCCATTCGGTCCTGCAACGTGGGGCAACTGTGGATCTGGCTGAGGTACTCAGGGTACTGCTCTGGTaGGAAGCCATGCAGGTCACA | + |
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Preference number: 3 (lower is better) Translates to: LLHSVLQRGATVDLAEVLRVLLW*EAMQVT Trigger: TGTGACCTGCATGGCTTCCAACCAGAGCAGTACCCT...GAGTACCTCAGCCAGATCCACAGTTGCCCCACGTTGCAGGACCGAATGGAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
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| 3UTR-3UTR CAA 90 bp | TCCATTCGGTCCTGCAACGTGGGGCAACTGTGGATCTGGCTGAGGTACTCCTCACAGGGGGTCAAAGGCTaGAAGGGTCCCAAAGAGATC | + |
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Preference number: 3 (lower is better) Translates to: SIRSCNVGQLWIWLRYSSQGVKG*KGPKEI Trigger: GATCTCTTTGGGACCCTTCAAGCCTTTGACCCCCTG...TGAGGAGTACCTCAGCCAGATCCACAGTTGCCCCACGTTGCAGGACCGAATGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
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| 3UTR CCA 72 bp | GGTCTCGATAGACAGGGCACTGTTCGATGTCGTGGCTaGACAGCATATAGAGACACTCTCTGGTGGAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: GLDRQGTVRCRG*TAYRDTLWWSR Trigger: TCTGCTCCACCAGAGAGTGTCTCTATATGCTGTCCAGCCACGACATCGAACAGTGCCCTGTCTATCGAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
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| CDS-3UTR CCA 90 bp | TTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACAGGGAGTCGAGGTGTCTaGGCCAGCCCCTCCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: FLAHDSQVRGSSRAGPCTGSRGV*ASPSSS Trigger: GCTGCTGGAGGGGCTGGCCCAGACACCTCGACTCCC...TGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS-3UTR CCA 90 bp | CTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACATTTGCCCGCTGGGTCTCCTaGCCAACCAGCACGATCTGC | + |
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Preference number: 4 (lower is better) Translates to: LAHDSQVRGSSRAGPCTFARWVS*PTSTIC Trigger: GCAGATCGTGCTGGTTGGCCAGGAGACCCAGCGGGC...AAATGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS-3UTR TCA 90 bp | AAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCGGGCCACACTCTTGCTaGGACATCGGCGGCGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: KFLAHDSQVRGSSRAGPCGPHSC*DIGGVL Trigger: GAGGACGCCGCCGATGTCTCAGCAAGAGTGTGGCCC...GCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031732.14 |
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| CDS-3UTR CCA 90 bp | TTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACACGCTTCCACTGGATCTaGCCGAGGGTGGAGGAGACC | + |
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Preference number: 4 (lower is better) Translates to: FLAHDSQVRGSSRAGPCTRFHWI*PRVEET Trigger: GGTCTCCTCCACCCTCGGCCAGATCCAGTGGAAGCG...TGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 ENSMUST00000136028.2 |
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| CDS-3UTR CCA 90 bp | AAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCCAGGCCCGCTTCCACTaGATCTGGCCGAGGGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: KFLAHDSQVRGSSRAGPCQARFH*IWPRVE Trigger: CTCCACCCTCGGCCAGATCCAGTGGAAGCGGGCCTG...GCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 ENSMUST00000136028.2 |
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| CDS-3UTR CCA 90 bp | GCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACATTTATAGGGAGTCGAGGTGTCTaGGCCAGCCCCTCCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: AHDSQVRGSSRAGPCTFIGSRGV*ASPSSS Trigger: GCTGCTGGAGGGGCTGGCCCAGACACCTCGACTCCC...TATAAATGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS-3UTR TCA 90 bp | AAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCCAGGTCACACGCAGGTaGGGCAGGCATCGAGACACC | + |
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Preference number: 4 (lower is better) Translates to: KFLAHDSQVRGSSRAGPCQVTRR*GRHRDT Trigger: GGTGTCTCGATGCCTGCCTCACCTGCGTGTGACCTG...GCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS-3UTR CCA 90 bp | AAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCCGCTTCCACTGGATCTaGCCGAGGGTGGAGGAGACC | + |
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Preference number: 4 (lower is better) Translates to: KFLAHDSQVRGSSRAGPCRFHWI*PRVEET Trigger: GGTCTCCTCCACCCTCGGCCAGATCCAGTGGAAGCG...GCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 ENSMUST00000136028.2 |
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| CDS-3UTR CCA 90 bp | TCAAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTCAGGCCCGCTTCCACTaGATCTGGCCGAGGGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: SNFSLMIVRLGAPPGQAPQARFH*IWPRVE Trigger: CTCCACCCTCGGCCAGATCCAGTGGAAGCGGGCCTG...AGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 ENSMUST00000136028.2 |
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| CDS-3UTR CCA 90 bp | CTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACATTTCAAGGAGAGAGCCAGTaGCATCTGGTGGTCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: LAHDSQVRGSSRAGPCTFQGESQ*HLVVQG Trigger: CCCCTGGACCACCAGATGCCACTGGCTCTCTCCTTG...AAATGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS-3UTR TCA 90 bp | GCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACATTTATACAGGTCACACGCAGGTaGGGCAGGCATCGAGACACC | + |
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Preference number: 4 (lower is better) Translates to: AHDSQVRGSSRAGPCTFIQVTRR*GRHRDT Trigger: GGTGTCTCGATGCCTGCCTCACCTGCGTGTGACCTG...TATAAATGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS-3UTR GCA 90 bp | CTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACATTTGCGGCGTCCTCCGAATaGCTGGAAATACAGGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: LAHDSQVRGSSRAGPCTFAASSE*LEIQAL Trigger: AAGGGCCTGTATTTCCAGGCATTCGGAGGACGCCGC...AAATGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031732.14 |
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| CDS-3UTR CCA 90 bp | CCCTGCACATTTATAAAAGAGGTCCCTCCTCTCCCCTCGAATACGCAGCACTGCCAGGCCCGCTTCCACTaGATCTGGCCGAGGGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: PCTFIKEVPPLPSNTQHCQARFH*IWPRVE Trigger: CTCCACCCTCGGCCAGATCCAGTGGAAGCGGGCCTG...GCAGTGCTGCGTATTCGAGGGGAGAGGAGGGACCTCTTTTATAAATGTGCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 ENSMUST00000136028.2 |
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| CDS-3UTR CCA 90 bp | TTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACAAGACCCGCTGCCCACTaGACTGCAGATAGACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: FLAHDSQVRGSSRAGPCTRPAAH*TADRPP Trigger: TGGAGGTCTATCTGCAGTCCAGTGGGCAGCGGGTCT...TGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS-3UTR CCA 90 bp | CTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACATTTCACTGTATAGGAGCGTaGCTGGTCCAGCTGGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LAHDSQVRGSSRAGPCTFHCIGA*LVQLGL Trigger: GAGACCCAGCTGGACCAGCCACGCTCCTATACAGTG...AAATGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS-3UTR CCA 90 bp | TTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACAAGAGACACTCTCTGGTaGAGCAGAGGGAGCAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: FLAHDSQVRGSSRAGPCTRDTLW*SRGSRH Trigger: GTGCCTGCTCCCTCTGCTCCACCAGAGAGTGTCTCT...TGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS-3UTR CCA 90 bp | CCATCAAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCCCACCCTGCTGGCTaGCAGGTCTCGATAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSNFSLMIVRLGAPPGQAPHPAG*QVSIDR Trigger: CCTGTCTATCGAGACCTGCCAGCCAGCAGGGTGGGG...GGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTTGATGG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR TCA 90 bp | AAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCGGTGGAATGTCATCTTaGAGACCCGCTGCCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: KFLAHDSQVRGSSRAGPCGGMSS*RPAAHW Trigger: CCAGTGGGCAGCGGGTCTTCAAGATGACATTCCACC...GCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR GCA 90 bp | CTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACATTTTCTGGTTGGAAGCCATaGAGGTCACACGCAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LAHDSQVRGSSRAGPCTFSGWKP*RSHAGE Trigger: CTCACCTGCGTGTGACCTGCATGGCTTCCAACCAGA...AAATGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACAACACGTGGTCCTTTGTaGGTAAGAAGCGGCGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLAHDSQVRGSSRAGPCTTRGPL*VRSGGS Trigger: GCTACCGCCGCTTCTTACCCACAAAGGACCACGTGT...TGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 ENSMUST00000136028.2 |
||
| CDS-3UTR CCA 90 bp | CCCTGCACATTTATAAAAGAGGTCCCTCCTCTCCCCTCGAATACGCAGCACTGCCGCTTCCACTGGATCTaGCCGAGGGTGGAGGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: PCTFIKEVPPLPSNTQHCRFHWI*PRVEET Trigger: GGTCTCCTCCACCCTCGGCCAGATCCAGTGGAAGCG...GCAGTGCTGCGTATTCGAGGGGAGAGGAGGGACCTCTTTTATAAATGTGCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 ENSMUST00000136028.2 |
||
| CDS-3UTR CCA 90 bp | CATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACATTTATAAAAGCCCGCTGGGTCTCCTaGCCAACCAGCACGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HDSQVRGSSRAGPCTFIKARWVS*PTSTIC Trigger: GCAGATCGTGCTGGTTGGCCAGGAGACCCAGCGGGC...TTTTATAAATGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CCA 90 bp | CTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACATTTCACAGAAGAGGACCTTaGCAGGCAAGGAGAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LAHDSQVRGSSRAGPCTFHRRGP*QARREP Trigger: TGGCTCTCTCCTTGCCTGCCAAGGTCCTCTTCTGTG...AAATGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CCA 90 bp | CCCTGCACATTTATAAAAGAGGTCCCTCCTCTCCCCTCGAATACGCAGCACTGCCCCCACCCTGCTGGCTaGCAGGTCTCGATAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PCTFIKEVPPLPSNTQHCPHPAG*QVSIDR Trigger: CCTGTCTATCGAGACCTGCCAGCCAGCAGGGTGGGG...GCAGTGCTGCGTATTCGAGGGGAGAGGAGGGACCTCTTTTATAAATGTGCAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CCA 90 bp | CTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACATTTGGGCAACTGTGGATCTaGCTGAGGTACTCCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LAHDSQVRGSSRAGPCTFGQLWI*LRYSSQ Trigger: CTGTGAGGAGTACCTCAGCCAGATCCACAGTTGCCC...AAATGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR TCA 90 bp | AAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCCCAGCACGATCTGCTTaGAGCTCATGGAGTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KFLAHDSQVRGSSRAGPCPARSA*SSWSGG Trigger: TCCACCACTCCATGAGCTTCAAGCAGATCGTGCTGG...GCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR TCA 90 bp | CTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACATTTCTGAAATCCGAGGTCTaGCTCAGCACCAAGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LAHDSQVRGSSRAGPCTFLKSEV*LSTKEW Trigger: CCATTCCTTGGTGCTGAGTCAGACCTCGGATTTCAG...AAATGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CCA 90 bp | GCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACATTTATACACTGTATAGGAGCGTaGCTGGTCCAGCTGGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AHDSQVRGSSRAGPCTFIHCIGA*LVQLGL Trigger: GAGACCCAGCTGGACCAGCCACGCTCCTATACAGTG...TATAAATGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CCA 90 bp | CACATTTATAAAAGAGGTCCCTCCTCTCCCCTCGAATACGCAGCACTGCTCCCCCAAGGAGAGAGCCAGTaGCATCTGGTGGTCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HIYKRGPSSPLEYAALLPQGESQ*HLVVQG Trigger: CCCCTGGACCACCAGATGCCACTGGCTCTCTCCTTG...GGGGAGCAGTGCTGCGTATTCGAGGGGAGAGGAGGGACCTCTTTTATAAATGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CCA 90 bp | CTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACATTTTATAGAGACACTCTCTaGTGGAGCAGAGGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAHDSQVRGSSRAGPCTFYRDTL*WSRGSR Trigger: CCTGCTCCCTCTGCTCCACCAGAGAGTGTCTCTATA...AAATGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CCA 90 bp | CCCTGCACATTTATAAAAGAGGTCCCTCCTCTCCCCTCGAATACGCAGCACTGCTACTCCTCACAGGCCTaGGCTGTTCCCCCAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PCTFIKEVPPLPSNTQHCYSSQA*AVPPGS Trigger: AGACCCTGGGGGAACAGCCCAGGCCTGTGAGGAGTA...GCAGTGCTGCGTATTCGAGGGGAGAGGAGGGACCTCTTTTATAAATGTGCAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR TCA 90 bp | ACTCCATCTCTTCTCAGCTCTAGCCCACGGCTCGACTTCCTTCAGGAGGAAAGGGGGCGACCAAGTCTTTaGCTGGGAGGAAGGAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: TPSLLSSSPRLDFLQEERGRPSL*LGGRRQ Trigger: TTGTCTCCTTCCTCCCAGTCAAAGACTTGGTCGCCC...CCTTTCCTCCTGAAGGAAGTCGAGCCGTGGGCTAGAGCTGAGAAGAGATGGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031732.14 |
||
| CDS-3UTR TCA 90 bp | CTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACATTTCCACGTAGTCAAGAATaGACACGTGGTCCTTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAHDSQVRGSSRAGPCTFPRSQE*TRGPLW Trigger: CCACAAAGGACCACGTGTTCATTCTTGACTACGTGG...AAATGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 ENSMUST00000136028.2 |
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| CDS-3UTR TCA 90 bp | TCAAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTCCAGCACGATCTGCTTaGAGCTCATGGAGTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SNFSLMIVRLGAPPGQAPPARSA*SSWSGG Trigger: TCCACCACTCCATGAGCTTCAAGCAGATCGTGCTGG...AGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR TCA 90 bp | ACTCCATCTCTTCTCAGCTCTAGCCCACGGCTCGACTTCCTTCAGGAGGAAAGGAACTGTGGATCTGGCTaGGGTACTCCTCACAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TPSLLSSSPRLDFLQEERNCGSG*GTPHRP Trigger: AGGCCTGTGAGGAGTACCTCAGCCAGATCCACAGTT...CCTTTCCTCCTGAAGGAAGTCGAGCCGTGGGCTAGAGCTGAGAAGAGATGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR GCA 90 bp | CTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACATTTTCTCCAGTTCCCAGCTaGCCGTATCTGTTATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LAHDSQVRGSSRAGPCTFSPVPS*PYLLFP Trigger: GGGAAATAACAGATACGGGCAGCTGGGAACTGGAGA...AAATGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR GCA 90 bp | CTCCATCTCTTCTCAGCTCTAGCCCACGGCTCGACTTCCTTCAGGAGGAAAGGCAAAGGGACCTTGATGTaGAGCTTGACGAAGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LHLFSALAHGSTSFRRKGKGTLM*SLTKEA Trigger: CGCCTCCTTCGTCAAGCTGCACATCAAGGTCCCTTT...GCCTTTCCTCCTGAAGGAAGTCGAGCCGTGGGCTAGAGCTGAGAAGAGATGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR GCA 90 bp | GACACTCCATCTCTTCTCAGCTCTAGCCCACGGCTCGACTTCCTTCAGGAGGAATTCTCCATTCGGTCCTaGAACGTGGGGCAACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DTPSLLSSSPRLDFLQEEFSIRS*NVGQLW Trigger: CCACAGTTGCCCCACGTTGCAGGACCGAATGGAGAA...TTCCTCCTGAAGGAAGTCGAGCCGTGGGCTAGAGCTGAGAAGAGATGGAGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR GCA 90 bp | TCAAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTTTCTCCATTCGGTCCTaGAACGTGGGGCAACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNFSLMIVRLGAPPGQAPFSIRS*NVGQLW Trigger: CCACAGTTGCCCCACGTTGCAGGACCGAATGGAGAA...AGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CCA 90 bp | CCATCAAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCGGGTACTGCTCTGGTTaGAAGCCATGCAGGTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: PSNFSLMIVRLGAPPGQAGYCSG*KPCRSH Trigger: GTGTGACCTGCATGGCTTCCAACCAGAGCAGTACCC...GGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTTGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CCA 90 bp | ACTCCATCTCTTCTCAGCTCTAGCCCACGGCTCGACTTCCTTCAGGAGGAAAGGGGGTACTGCTCTGGTTaGAAGCCATGCAGGTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: TPSLLSSSPRLDFLQEERGYCSG*KPCRSH Trigger: GTGTGACCTGCATGGCTTCCAACCAGAGCAGTACCC...CCTTTCCTCCTGAAGGAAGTCGAGCCGTGGGCTAGAGCTGAGAAGAGATGGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS-3UTR CCA 90 bp | GCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACATTTATACACAGAAGAGGACCTTaGCAGGCAAGGAGAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AHDSQVRGSSRAGPCTFIHRRGP*QARREP Trigger: TGGCTCTCTCCTTGCCTGCCAAGGTCCTCTTCTGTG...TATAAATGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CCA 90 bp | CACATTTATAAAAGAGGTCCCTCCTCTCCCCTCGAATACGCAGCACTGCTCCCCAGAGACACTCTCTGGTaGAGCAGAGGGAGCAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HIYKRGPSSPLEYAALLPRDTLW*SRGSRH Trigger: GTGCCTGCTCCCTCTGCTCCACCAGAGAGTGTCTCT...GGGGAGCAGTGCTGCGTATTCGAGGGGAGAGGAGGGACCTCTTTTATAAATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CCA 90 bp | CATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACATTTATAAAATACTCCTCACAGGCCTaGGCTGTTCCCCCAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HDSQVRGSSRAGPCTFIKYSSQA*AVPPGS Trigger: AGACCCTGGGGGAACAGCCCAGGCCTGTGAGGAGTA...TTTTATAAATGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CCA 90 bp | ACTCCATCTCTTCTCAGCTCTAGCCCACGGCTCGACTTCCTTCAGGAGGAAAGGGGGCAACTGTGGATCTaGCTGAGGTACTCCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TPSLLSSSPRLDFLQEERGQLWI*LRYSSQ Trigger: CTGTGAGGAGTACCTCAGCCAGATCCACAGTTGCCC...CCTTTCCTCCTGAAGGAAGTCGAGCCGTGGGCTAGAGCTGAGAAGAGATGGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR TCA 90 bp | CTCCATCTCTTCTCAGCTCTAGCCCACGGCTCGACTTCCTTCAGGAGGAAAGGCAGACCAGAGCATTTTTaGGGAAGAAGAGGGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHLFSALAHGSTSFRRKGRPEHF*GRRGSP Trigger: TGGGGACCCTCTTCTTCCTCAAAAATGCTCTGGTCT...GCCTTTCCTCCTGAAGGAAGTCGAGCCGTGGGCTAGAGCTGAGAAGAGATGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 ENSMUST00000136028.2 |
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| CDS-3UTR TCA 90 bp | AAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCAGACCAGAGCATTTTTaGGGAAGAAGAGGGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KFLAHDSQVRGSSRAGPCRPEHF*GRRGSP Trigger: TGGGGACCCTCTTCTTCCTCAAAAATGCTCTGGTCT...GCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 ENSMUST00000136028.2 |
||
| CDS-3UTR TCA 90 bp | CATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACATTTATAAAAGGTGGAATGTCATCTTaGAGACCCGCTGCCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: HDSQVRGSSRAGPCTFIKGGMSS*RPAAHW Trigger: CCAGTGGGCAGCGGGTCTTCAAGATGACATTCCACC...TTTTATAAATGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR TCA 90 bp | GACACTCCATCTCTTCTCAGCTCTAGCCCACGGCTCGACTTCCTTCAGGAGGAACTGAAATCCGAGGTCTaGCTCAGCACCAAGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: DTPSLLSSSPRLDFLQEELKSEV*LSTKEW Trigger: CCATTCCTTGGTGCTGAGTCAGACCTCGGATTTCAG...TTCCTCCTGAAGGAAGTCGAGCCGTGGGCTAGAGCTGAGAAGAGATGGAGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR TCA 90 bp | CACATTTATAAAAGAGGTCCCTCCTCTCCCCTCGAATACGCAGCACTGCTCCCCCCAGCAGCTCCTTGCTaGAATCCGAGGTCTGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: HIYKRGPSSPLEYAALLPPAAPC*NPRSDS Trigger: TGAGTCAGACCTCGGATTTCAGCAAGGAGCTGCTGG...GGGGAGCAGTGCTGCGTATTCGAGGGGAGAGGAGGGACCTCTTTTATAAATGTG 54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR TCA 90 bp | CACATTTATAAAAGAGGTCCCTCCTCTCCCCTCGAATACGCAGCACTGCTCCCCAACTGTGGATCTGGCTaGGGTACTCCTCACAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HIYKRGPSSPLEYAALLPNCGSG*GTPHRP Trigger: AGGCCTGTGAGGAGTACCTCAGCCAGATCCACAGTT...GGGGAGCAGTGCTGCGTATTCGAGGGGAGAGGAGGGACCTCTTTTATAAATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR GCA 90 bp | GCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACATTTATACCAACCAGCACGATCTaGTTGAAGCTCATGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AHDSQVRGSSRAGPCTFIPTSTI*LKLMEW Trigger: CCACTCCATGAGCTTCAAGCAGATCGTGCTGGTTGG...TATAAATGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR GCA 90 bp | CCATCAAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCAAAGGGACCTTGATGTaGAGCTTGACGAAGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PSNFSLMIVRLGAPPGQAKGTLM*SLTKEA Trigger: CGCCTCCTTCGTCAAGCTGCACATCAAGGTCCCTTT...GGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTTGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR GCA 90 bp | CACATTTATAAAAGAGGTCCCTCCTCTCCCCTCGAATACGCAGCACTGCTCCCCTCTTTCCTTCCTCACTaGCGGCTGTTCCCGAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: HIYKRGPSSPLEYAALLPSFLPH*RLFPSS Trigger: GCTACTCGGGAACAGCCGGCAGTGAGGAAGGAAAGA...GGGGAGCAGTGCTGCGTATTCGAGGGGAGAGGAGGGACCTCTTTTATAAATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
||
| CDS-3UTR CCA 90 bp | GACACTCCATCTCTTCTCAGCTCTAGCCCACGGCTCGACTTCCTTCAGGAGGAAGTGTTCCACCAGCTCTaGGGGGAACAACTGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: DTPSLLSSSPRLDFLQEEVFHQL*GEQLNR Trigger: TCTGTTCAGTTGTTCCCCCCAGAGCTGGTGGAACAC...TTCCTCCTGAAGGAAGTCGAGCCGTGGGCTAGAGCTGAGAAGAGATGGAGTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031732.14 |
||
| CDS-3UTR CCA 90 bp | CCCTGCACATTTATAAAAGAGGTCCCTCCTCTCCCCTCGAATACGCAGCACTGCGGATCTGGCCGAGGGTaGAGGAGACCAGAGCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: PCTFIKEVPPLPSNTQHCGSGRG*RRPEHF Trigger: AAAATGCTCTGGTCTCCTCCACCCTCGGCCAGATCC...GCAGTGCTGCGTATTCGAGGGGAGAGGAGGGACCTCTTTTATAAATGTGCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 ENSMUST00000136028.2 |
||
| CDS-3UTR CCA 90 bp | ACTCCATCTCTTCTCAGCTCTAGCCCACGGCTCGACTTCCTTCAGGAGGAAAGGGATAGTGAACCTGTGTaGGCTCCCCTCGGTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: TPSLLSSSPRLDFLQEERDSEPV*APLGPF Trigger: AAATGGACCGAGGGGAGCCCACACAGGTTCACTATC...CCTTTCCTCCTGAAGGAAGTCGAGCCGTGGGCTAGAGCTGAGAAGAGATGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR TCA 90 bp | GATATAGAGGGTACTGCTCTGGTTGGAAGCCATGCAGGTCACACGCAGGTGAGGAGACCAGAGCATTTTTaGGGAAGAAGAGGGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DIEGTALVGSHAGHTQVRRPEHF*GRRGSP Trigger: TGGGGACCCTCTTCTTCCTCAAAAATGCTCTGGTCT...CCTCACCTGCGTGTGACCTGCATGGCTTCCAACCAGAGCAGTACCCTCTATATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
||
| CDS-3UTR GCA 90 bp | CACATTTATAAAAGAGGTCCCTCCTCTCCCCTCGAATACGCAGCACTGCTCCCCCCAACCAGCACGATCTaGTTGAAGCTCATGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HIYKRGPSSPLEYAALLPPTSTI*LKLMEW Trigger: CCACTCCATGAGCTTCAAGCAGATCGTGCTGGTTGG...GGGGAGCAGTGCTGCGTATTCGAGGGGAGAGGAGGGACCTCTTTTATAAATGTG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR GCA 90 bp | CATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACATTTATAAAATCTGGTTGGAAGCCATaGAGGTCACACGCAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HDSQVRGSSRAGPCTFIKSGWKP*RSHAGE Trigger: CTCACCTGCGTGTGACCTGCATGGCTTCCAACCAGA...TTTTATAAATGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CCA 90 bp | CTCCATCTCTTCTCAGCTCTAGCCCACGGCTCGACTTCCTTCAGGAGGAAAGGCGACCAAGTCTTTGACTaGGAGGAAGGAGACAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LHLFSALAHGSTSFRRKGDQVFD*EEGDNV Trigger: CACATTGTCTCCTTCCTCCCAGTCAAAGACTTGGTC...GCCTTTCCTCCTGAAGGAAGTCGAGCCGTGGGCTAGAGCTGAGAAGAGATGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031732.14 |
||
| CDS-3UTR CCA 90 bp | CATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACATTTATAAAAACACGTGGTCCTTTGTaGGTAAGAAGCGGCGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: HDSQVRGSSRAGPCTFIKTRGPL*VRSGGS Trigger: GCTACCGCCGCTTCTTACCCACAAAGGACCACGTGT...TTTTATAAATGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 ENSMUST00000136028.2 |
||
| CDS-3UTR CCA 90 bp | CCCTGCACATTTATAAAAGAGGTCCCTCCTCTCCCCTCGAATACGCAGCACTGCGATAGTGAACCTGTGTaGGCTCCCCTCGGTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: PCTFIKEVPPLPSNTQHCDSEPV*APLGPF Trigger: AAATGGACCGAGGGGAGCCCACACAGGTTCACTATC...GCAGTGCTGCGTATTCGAGGGGAGAGGAGGGACCTCTTTTATAAATGTGCAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CCA 90 bp | CACATTTATAAAAGAGGTCCCTCCTCTCCCCTCGAATACGCAGCACTGCTCCCCTATAGAGACACTCTCTaGTGGAGCAGAGGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HIYKRGPSSPLEYAALLPYRDTL*WSRGSR Trigger: CCTGCTCCCTCTGCTCCACCAGAGAGTGTCTCTATA...GGGGAGCAGTGCTGCGTATTCGAGGGGAGAGGAGGGACCTCTTTTATAAATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CCA 90 bp | AAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCGTTCGATGTCGTGGCTaGACAGCATATAGAGACACT | + |
|
Preference number: 4 (lower is better) Translates to: KFLAHDSQVRGSSRAGPCVRCRG*TAYRDT Trigger: AGTGTCTCTATATGCTGTCCAGCCACGACATCGAAC...GCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR TCA 90 bp | TTCGATGTCGTGGCTGGACAGCATATAGAGACACTCTCTGGTGGAGCAGAGGGACCACGTAGTCAAGAATaGACACGTGGTCCTTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FDVVAGQHIETLSGGAEGPRSQE*TRGPLW Trigger: CCACAAAGGACCACGTGTTCATTCTTGACTACGTGG...TCCCTCTGCTCCACCAGAGAGTGTCTCTATATGCTGTCCAGCCACGACATCGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
||
| CDS-3UTR GCA 90 bp | CACATTTATAAAAGAGGTCCCTCCTCTCCCCTCGAATACGCAGCACTGCTCCCCTCTCCAGTTCCCAGCTaGCCGTATCTGTTATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HIYKRGPSSPLEYAALLPSPVPS*PYLLFP Trigger: GGGAAATAACAGATACGGGCAGCTGGGAACTGGAGA...GGGGAGCAGTGCTGCGTATTCGAGGGGAGAGGAGGGACCTCTTTTATAAATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR GCA 90 bp | AAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCCTGCAACATGTCCAGTaGCTCCCAGAAGAAATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KFLAHDSQVRGSSRAGPCLQHVQ*LPEEIF Trigger: AAAGATTTCTTCTGGGAGGCACTGGACATGTTGCAG...GCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CCA 90 bp | CCCTGCACATTTATAAAAGAGGTCCCTCCTCTCCCCTCGAATACGCAGCACTGCCGTCCTCCGAATGCCTaGAAATACAGGCCCTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PCTFIKEVPPLPSNTQHCRPPNA*KYRPFV Trigger: TACAAAGGGCCTGTATTTCCAGGCATTCGGAGGACG...GCAGTGCTGCGTATTCGAGGGGAGAGGAGGGACCTCTTTTATAAATGTGCAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031732.14 |
||
| CDS-3UTR CCA 90 bp | GCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACATTTATAGTTCGATGTCGTGGCTaGACAGCATATAGAGACACT | + |
|
Preference number: 4 (lower is better) Translates to: AHDSQVRGSSRAGPCTFIVRCRG*TAYRDT Trigger: AGTGTCTCTATATGCTGTCCAGCCACGACATCGAAC...TATAAATGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CCA 90 bp | TCAAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTCAGAAGAAATCTTTCTaGGCAGCCATCAAGGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SNFSLMIVRLGAPPGQAPQKKSF*AAIKGI Trigger: GATGCCCTTGATGGCTGCCCAGAAAGATTTCTTCTG...AGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CCA 90 bp | GACACTCCATCTCTTCTCAGCTCTAGCCCACGGCTCGACTTCCTTCAGGAGGAACAGAAGAAATCTTTCTaGGCAGCCATCAAGGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: DTPSLLSSSPRLDFLQEEQKKSF*AAIKGI Trigger: GATGCCCTTGATGGCTGCCCAGAAAGATTTCTTCTG...TTCCTCCTGAAGGAAGTCGAGCCGTGGGCTAGAGCTGAGAAGAGATGGAGTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR TCA 90 bp | CATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACATTTATAAAACCACGTAGTCAAGAATaGACACGTGGTCCTTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HDSQVRGSSRAGPCTFIKPRSQE*TRGPLW Trigger: CCACAAAGGACCACGTGTTCATTCTTGACTACGTGG...TTTTATAAATGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 ENSMUST00000136028.2 |
||
| CDS-3UTR GCA 90 bp | TCAAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTCTGCAACATGTCCAGTaGCTCCCAGAAGAAATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SNFSLMIVRLGAPPGQAPLQHVQ*LPEEIF Trigger: AAAGATTTCTTCTGGGAGGCACTGGACATGTTGCAG...AGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS-3UTR CCA 90 bp | CTCCATCTCTTCTCAGCTCTAGCCCACGGCTCGACTTCCTTCAGGAGGAAAGGCTCAAGAATGAACACGTaGTCCTTTGTGGGTAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LHLFSALAHGSTSFRRKGSRMNT*SFVGKK Trigger: CTTCTTACCCACAAAGGACCACGTGTTCATTCTTGA...GCCTTTCCTCCTGAAGGAAGTCGAGCCGTGGGCTAGAGCTGAGAAGAGATGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 ENSMUST00000136028.2 |
||
| CDS-3UTR CCA 90 bp | CCATCAAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCAAGCTCATGGAGTGGTaGAATGTCATCTTGAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: PSNFSLMIVRLGAPPGQAKLMEW*NVILKT Trigger: GGTCTTCAAGATGACATTCCACCACTCCATGAGCTT...GGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTTGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS-3UTR CCA 90 bp | GGCCAAATTCATCTACCAGGCCAAGATGATTATAGCCAAGAGCACAGAAGAGGAGGATCTGGCCGAGGGTaGAGGAGACCAGAGCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: GQIHLPGQDDYSQEHRRGGSGRG*RRPEHF Trigger: AAAATGCTCTGGTCTCCTCCACCCTCGGCCAGATCC...TCCTCTTCTGTGCTCTTGGCTATAATCATCTTGGCCTGGTAGATGAATTTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
||
| CDS-3UTR CCA 90 bp | CACATTTATAAAAGAGGTCCCTCCTCTCCCCTCGAATACGCAGCACTGCTCCCCAAGCTCATGGAGTGGTaGAATGTCATCTTGAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: HIYKRGPSSPLEYAALLPKLMEW*NVILKT Trigger: GGTCTTCAAGATGACATTCCACCACTCCATGAGCTT...GGGGAGCAGTGCTGCGTATTCGAGGGGAGAGGAGGGACCTCTTTTATAAATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CCA 90 bp | ACTCCATCTCTTCTCAGCTCTAGCCCACGGCTCGACTTCCTTCAGGAGGAAAGGTTGAAGCTCATGGAGTaGTGGAATGTCATCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TPSLLSSSPRLDFLQEERLKLME*WNVILK Trigger: CTTCAAGATGACATTCCACCACTCCATGAGCTTCAA...CCTTTCCTCCTGAAGGAAGTCGAGCCGTGGGCTAGAGCTGAGAAGAGATGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CCA 90 bp | TTCGATGTCGTGGCTGGACAGCATATAGAGACACTCTCTGGTGGAGCAGAGGGATCAAGAATGAACACGTaGTCCTTTGTGGGTAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FDVVAGQHIETLSGGAEGSRMNT*SFVGKK Trigger: CTTCTTACCCACAAAGGACCACGTGTTCATTCTTGA...TCCCTCTGCTCCACCAGAGAGTGTCTCTATATGCTGTCCAGCCACGACATCGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136028.2 |
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| CDS-3UTR GCA 90 bp | GACACTCCATCTCTTCTCAGCTCTAGCCCACGGCTCGACTTCCTTCAGGAGGAATATCTGTTATTTCCCTaGATAAAGATCCGGCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: DTPSLLSSSPRLDFLQEEYLLFP*IKIRPN Trigger: ATTTGGCCGGATCTTTATGCAGGGAAATAACAGATA...TTCCTCCTGAAGGAAGTCGAGCCGTGGGCTAGAGCTGAGAAGAGATGGAGTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS-3UTR GCA 90 bp | CCATCAAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCTATCTGTTATTTCCCTaGATAAAGATCCGGCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PSNFSLMIVRLGAPPGQAYLLFP*IKIRPN Trigger: ATTTGGCCGGATCTTTATGCAGGGAAATAACAGATA...GGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTTGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS-3UTR CCA 90 bp | CATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACATTTATAAAATCAAGAATGAACACGTaGTCCTTTGTGGGTAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HDSQVRGSSRAGPCTFIKSRMNT*SFVGKK Trigger: CTTCTTACCCACAAAGGACCACGTGTTCATTCTTGA...TTTTATAAATGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 ENSMUST00000136028.2 |
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| CDS TCA 90 bp | TCTTCCAGGGCCGGGCACCAGAACTCTGGTCACGGATTCGAGGGCTaGGCCTTCGACAGATGCGCCTCCACACGCCCTCAGCATCACACA | + |
|
Preference number: 5 (lower is better) Translates to: SSRAGHQNSGHGFEG*AFDRCASTRPQHHT Trigger: TGTGTGATGCTGAGGGCGTGTGGAGGCGCATCTGTCGAAGGCTCAGCCCTCGAATCCGTGACCAGAGTTCTGGTGCCCGGCCCTGGAAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031732.14 |
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| CDS TCA 90 bp | AGAAGCGGCGGTAGCCATGGGCTAGCATGGGGGCCACACTCTTGCTaGGACATCGGCGGCGTCCTCCGAATGCCTGGAAATACAGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RSGGSHGLAWGPHSC*DIGGVLRMPGNTGP Trigger: AGGGCCTGTATTTCCAGGCATTCGGAGGACGCCGCCGATGTCTCAGCAAGAGTGTGGCCCCCATGCTAGCCCATGGCTACCGCCGCTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031732.14 |
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| CDS TCA 90 bp | GCCCCACAGCCGCACCCCAGCAGCTCCTTGCTGAAATCCGAGGTCTaGCTCAGCACCAAGGAATGGTTGAGGCCACACCACAGGGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: APQPHPSSSLLKSEV*LSTKEWLRPHHRAM Trigger: CATCGCCCTGTGGTGTGGCCTCAACCATTCCTTGGTGCTGAGTCAGACCTCGGATTTCAGCAAGGAGCTGCTGGGGTGCGGCTGTGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS GCA 90 bp | GACCTCCACACAGTCACAGGCGCGGCTACCGGTGGTGCCCACCACTaGCGGCTGTTCCCGAGTAGCCAAAACATAGAGGTACTTCCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: DLHTVTGAATGGAHH*RLFPSSQNIEVLPV Trigger: TACCGGAAGTACCTCTATGTTTTGGCTACTCGGGAACAGCCGGCAGTGGTGGGCACCACCGGTAGCCGCGCCTGTGACTGTGTGGAGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS GCA 90 bp | TCTCTGGTGGAGCAGAGGGAGCAGGCACACAAAGGGACCTTGATGTaGAGCTTGACGAAGGAGGCGCTCCCCTTGGGCCAGCCAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLVEQREQAHKGTLM*SLTKEALPLGQPGR Trigger: TCTTCCTGGCTGGCCCAAGGGGAGCGCCTCCTTCGTCAAGCTGCACATCAAGGTCCCTTTGTGTGCCTGCTCCCTCTGCTCCACCAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS GCA 90 bp | AGGAGCAGTAGGGCCCGCTGGGTCTCCTGGCCAACCAGCACGATCTaGTTGAAGCTCATGGAGTGGTGGAATGTCATCTTGAAGACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RSSRARWVSWPTSTI*LKLMEWWNVILKTR Trigger: GCGGGTCTTCAAGATGACATTCCACCACTCCATGAGCTTCAAGCAGATCGTGCTGGTTGGCCAGGAGACCCAGCGGGCCCTACTGCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS CCA 90 bp | ACTTCCGGTAAACCGTGTCACATCTTGGGTCGGACGCAAAATCCTTaGCGCCTCGACACAACACCACGTAGCGGCAGGCCCGCTTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: TSGKPCHILGRTQNP*RLDTTPRSGRPAST Trigger: AGTGGAAGCGGGCCTGCCGCTACGTGGTGTTGTGTCGAGGCGCCAAGGATTTTGCGTCCGACCCAAGATGTGACACGGTTTACCGGAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 ENSMUST00000136028.2 |
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| CDS-3UTR CAA 90 bp | CCATCAAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCATGGGGGCCACACTCTaGCTGAGACATCGGCGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: PSNFSLMIVRLGAPPGQAMGATL*LRHRRR Trigger: ACGCCGCCGATGTCTCAGCAAGAGTGTGGCCCCCAT...GGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTTGATGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031732.14 |
||
| CDS-3UTR CAA 90 bp | CTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACATTTCAGGGGGTCAAAGGCTaGAAGGGTCCCAAAGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: LAHDSQVRGSSRAGPCTFQGVKG*KGPKEI Trigger: GATCTCTTTGGGACCCTTCAAGCCTTTGACCCCCTG...AAATGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CAA 90 bp | CCATCAAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCGCACAGAAGAGGACCTaGGCAGGCAAGGAGAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PSNFSLMIVRLGAPPGQAAQKRT*AGKERA Trigger: GGCTCTCTCCTTGCCTGCCAAGGTCCTCTTCTGTGC...GGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTTGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CAA 90 bp | GACACTCCATCTCTTCTCAGCTCTAGCCCACGGCTCGACTTCCTTCAGGAGGAAGCACAGAAGAGGACCTaGGCAGGCAAGGAGAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DTPSLLSSSPRLDFLQEEAQKRT*AGKERA Trigger: GGCTCTCTCCTTGCCTGCCAAGGTCCTCTTCTGTGC...TTCCTCCTGAAGGAAGTCGAGCCGTGGGCTAGAGCTGAGAAGAGATGGAGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CAA 90 bp | GACACTCCATCTCTTCTCAGCTCTAGCCCACGGCTCGACTTCCTTCAGGAGGAAACCTTGATGTGCAGCTaGACGAAGGAGGCGCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: DTPSLLSSSPRLDFLQEETLMCS*TKEALP Trigger: GGGGAGCGCCTCCTTCGTCAAGCTGCACATCAAGGT...TTCCTCCTGAAGGAAGTCGAGCCGTGGGCTAGAGCTGAGAAGAGATGGAGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CAA 90 bp | TCAAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTACCTTGATGTGCAGCTaGACGAAGGAGGCGCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SNFSLMIVRLGAPPGQAPTLMCS*TKEALP Trigger: GGGGAGCGCCTCCTTCGTCAAGCTGCACATCAAGGT...AGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS CCA 90 bp | TGGGTCTCCTGGCCAACCAGCACGATCTGCTTGAAGCTCATGGAGTaGTGGAATGTCATCTTGAAGACCCGCTGCCCACTGGACTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: WVSWPTSTICLKLME*WNVILKTRCPLDCR Trigger: TCTGCAGTCCAGTGGGCAGCGGGTCTTCAAGATGACATTCCACCACTCCATGAGCTTCAAGCAGATCGTGCTGGTTGGCCAGGAGACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS CCA 90 bp | ATCTTTCCTTCCTCTGTGAGGAGCAGTAGGGCCCGCTGGGTCTCCTaGCCAACCAGCACGATCTGCTTGAAGCTCATGGAGTGGTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: IFPSSVRSSRARWVS*PTSTICLKLMEWWN Trigger: ATTCCACCACTCCATGAGCTTCAAGCAGATCGTGCTGGTTGGCCAGGAGACCCAGCGGGCCCTACTGCTCCTCACAGAGGAAGGAAAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CAA 90 bp | AAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCAGGGCGACCAAGTCTTaGACTGGGAGGAAGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: KFLAHDSQVRGSSRAGPCRATKS*TGRKET Trigger: TGTCTCCTTCCTCCCAGTCAAAGACTTGGTCGCCCT...GCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031732.14 |
||
| CDS-3UTR CAA 90 bp | AAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCCAGGGGGTCAAAGGCTaGAAGGGTCCCAAAGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: KFLAHDSQVRGSSRAGPCQGVKG*KGPKEI Trigger: GATCTCTTTGGGACCCTTCAAGCCTTTGACCCCCTG...GCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CAA 90 bp | TCAAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTTGGTGGAATGTCATCTaGAAGACCCGCTGCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SNFSLMIVRLGAPPGQAPWWNVI*KTRCPL Trigger: CAGTGGGCAGCGGGTCTTCAAGATGACATTCCACCA...AGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CAA 90 bp | CCATCAAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCTGGTGGAATGTCATCTaGAAGACCCGCTGCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: PSNFSLMIVRLGAPPGQAWWNVI*KTRCPL Trigger: CAGTGGGCAGCGGGTCTTCAAGATGACATTCCACCA...GGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTTGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
||
| CDS-3UTR CAA 90 bp | CCATCAAATTTCTCGCTCATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCAGGGTACTGCTCTGGTaGGAAGCCATGCAGGTCACA | + |
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Preference number: 5 (lower is better) Translates to: PSNFSLMIVRLGAPPGQARVLLW*EAMQVT Trigger: TGTGACCTGCATGGCTTCCAACCAGAGCAGTACCCT...GGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTTGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS-3UTR CAA 90 bp | GACACTCCATCTCTTCTCAGCTCTAGCCCACGGCTCGACTTCCTTCAGGAGGAAAGGGTACTGCTCTGGTaGGAAGCCATGCAGGTCACA | + |
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Preference number: 5 (lower is better) Translates to: DTPSLLSSSPRLDFLQEERVLLW*EAMQVT Trigger: TGTGACCTGCATGGCTTCCAACCAGAGCAGTACCCT...TTCCTCCTGAAGGAAGTCGAGCCGTGGGCTAGAGCTGAGAAGAGATGGAGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS-3UTR CAA 90 bp | CATGATAGTCAGGTTAGGGGCTCCTCCAGGGCAGGCCCCTGCACATTTATAAAAACCAGCACGATCTGCTaGAAGCTCATGGAGTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: HDSQVRGSSRAGPCTFIKTSTIC*KLMEWW Trigger: CCACCACTCCATGAGCTTCAAGCAGATCGTGCTGGT...TTTTATAAATGTGCAGGGGCCTGCCCTGGAGGAGCCCCTAACCTGACTATCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS CAA 90 bp | CACAAAGGGACCTTGATGTGCAGCTTGACGAAGGAGGCGCTCCCCTaGGGCCAGCCAGGAAGACGGCCTCCGGCCCCACAGCCGCACCCC | + |
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Preference number: 6 (lower is better) Translates to: HKGTLMCSLTKEALP*GQPGRRPPAPQPHP Trigger: GGGGTGCGGCTGTGGGGCCGGAGGCCGTCTTCCTGGCTGGCCCAAGGGGAGCGCCTCCTTCGTCAAGCTGCACATCAAGGTCCCTTTGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS TCA 72 bp | GCCGGGCACCAGAACTCTGGTCACGGATTCGAGGGCTaGGCCTTCGACAGATGCGCCTCCACACGCCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: AGHQNSGHGFEG*AFDRCASTRPQ Trigger: CTGAGGGCGTGTGGAGGCGCATCTGTCGAAGGCTCAGCCCTCGAATCCGTGACCAGAGTTCTGGTGCCCGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031732.14 |
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| CDS CAA 90 bp | GTGGAGCAGAGGGAGCAGGCACACAAAGGGACCTTGATGTGCAGCTaGACGAAGGAGGCGCTCCCCTTGGGCCAGCCAGGAAGACGGCCT | + |
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Preference number: 6 (lower is better) Translates to: VEQREQAHKGTLMCS*TKEALPLGQPGRRP Trigger: AGGCCGTCTTCCTGGCTGGCCCAAGGGGAGCGCCTCCTTCGTCAAGCTGCACATCAAGGTCCCTTTGTGTGCCTGCTCCCTCTGCTCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS TCA 72 bp | CTCCGGCCCCACAGCCGCACCCCAGCAGCTCCTTGCTaGAATCCGAGGTCTGACTCAGCACCAAGGAATGGT | + |
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Preference number: 6 (lower is better) Translates to: LRPHSRTPAAPC*NPRSDSAPRNG Trigger: ACCATTCCTTGGTGCTGAGTCAGACCTCGGATTTCAGCAAGGAGCTGCTGGGGTGCGGCTGTGGGGCCGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS CAA 72 bp | GGAATGGTTGAGGCCACACCACAGGGCGATGGGGCGTaGCAGATAGTGAACCTGTGTGGGCTCCCCTCGGTC | + |
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Preference number: 6 (lower is better) Translates to: GMVEATPQGDGA*QIVNLCGLPSV Trigger: GACCGAGGGGAGCCCACACAGGTTCACTATCTGCAACGCCCCATCGCCCTGTGGTGTGGCCTCAACCATTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS TCA 72 bp | GGTAGCCATGGGCTAGCATGGGGGCCACACTCTTGCTaGGACATCGGCGGCGTCCTCCGAATGCCTGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: GSHGLAWGPHSC*DIGGVLRMPGN Trigger: ATTTCCAGGCATTCGGAGGACGCCGCCGATGTCTCAGCAAGAGTGTGGCCCCCATGCTAGCCCATGGCTACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031732.14 |
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| CDS GCA 72 bp | ACAGTCACAGGCGCGGCTACCGGTGGTGCCCACCACTaGCGGCTGTTCCCGAGTAGCCAAAACATAGAGGTA | + |
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Preference number: 6 (lower is better) Translates to: TVTGAATGGAHH*RLFPSSQNIEV Trigger: TACCTCTATGTTTTGGCTACTCGGGAACAGCCGGCAGTGGTGGGCACCACCGGTAGCCGCGCCTGTGACTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS CCA 72 bp | ATGGCAGCTCTCTTCCAGGGCCGGGCACCAGAACTCTaGTCACGGATTCGAGGGCTGAGCCTTCGACAGATG | + |
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Preference number: 6 (lower is better) Translates to: MAALFQGRAPEL*SRIRGLSLRQM Trigger: CATCTGTCGAAGGCTCAGCCCTCGAATCCGTGACCAGAGTTCTGGTGCCCGGCCCTGGAAGAGAGCTGCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031732.14 |
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| CDS CCA 72 bp | TCCTCTGTGAGGAGCAGTAGGGCCCGCTGGGTCTCCTaGCCAACCAGCACGATCTGCTTGAAGCTCATGGAG | + |
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Preference number: 6 (lower is better) Translates to: SSVRSSRARWVS*PTSTICLKLME Trigger: CTCCATGAGCTTCAAGCAGATCGTGCTGGTTGGCCAGGAGACCCAGCGGGCCCTACTGCTCCTCACAGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS CCA 72 bp | AAACCGTGTCACATCTTGGGTCGGACGCAAAATCCTTaGCGCCTCGACACAACACCACGTAGCGGCAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: KPCHILGRTQNP*RLDTTPRSGRP Trigger: GGGCCTGCCGCTACGTGGTGTTGTGTCGAGGCGCCAAGGATTTTGCGTCCGACCCAAGATGTGACACGGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 ENSMUST00000136028.2 |
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| CDS CAA 90 bp | AGCAGTAGGGCCCGCTGGGTCTCCTGGCCAACCAGCACGATCTGCTaGAAGCTCATGGAGTGGTGGAATGTCATCTTGAAGACCCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SSRARWVSWPTSTIC*KLMEWWNVILKTRC Trigger: GCAGCGGGTCTTCAAGATGACATTCCACCACTCCATGAGCTTCAAGCAGATCGTGCTGGTTGGCCAGGAGACCCAGCGGGCCCTACTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS GCA 72 bp | AGGGCCCGCTGGGTCTCCTGGCCAACCAGCACGATCTaGTTGAAGCTCATGGAGTGGTGGAATGTCATCTTG | + |
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Preference number: 6 (lower is better) Translates to: RARWVSWPTSTI*LKLMEWWNVIL Trigger: CAAGATGACATTCCACCACTCCATGAGCTTCAAGCAGATCGTGCTGGTTGGCCAGGAGACCCAGCGGGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS CAA 72 bp | GCCCGCTGGGTCTCCTGGCCAACCAGCACGATCTGCTaGAAGCTCATGGAGTGGTGGAATGTCATCTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: ARWVSWPTSTIC*KLMEWWNVILK Trigger: CTTCAAGATGACATTCCACCACTCCATGAGCTTCAAGCAGATCGTGCTGGTTGGCCAGGAGACCCAGCGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS TCA 72 bp | AGTAGTGGCAGGTCTGGCCTAGGGCGACCAAGTCTTTaGCTGGGAGGAAGGAGACAATGTGTTCCACCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SSGRSGLGRPSL*LGGRRQCVPPA Trigger: AGCTGGTGGAACACATTGTCTCCTTCCTCCCAGTCAAAGACTTGGTCGCCCTAGGCCAGACCTGCCACTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031732.14 |
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| CDS CCA 72 bp | CCAACCAGCACGATCTGCTTGAAGCTCATGGAGTGGTaGAATGTCATCTTGAAGACCCGCTGCCCACTGGAC | + |
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Preference number: 6 (lower is better) Translates to: PTSTICLKLMEW*NVILKTRCPLD Trigger: GTCCAGTGGGCAGCGGGTCTTCAAGATGACATTCCACCACTCCATGAGCTTCAAGCAGATCGTGCTGGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS CCA 72 bp | TGGCCAACCAGCACGATCTGCTTGAAGCTCATGGAGTaGTGGAATGTCATCTTGAAGACCCGCTGCCCACTG | + |
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Preference number: 6 (lower is better) Translates to: WPTSTICLKLME*WNVILKTRCPL Trigger: CAGTGGGCAGCGGGTCTTCAAGATGACATTCCACCACTCCATGAGCTTCAAGCAGATCGTGCTGGTTGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031732.14 ENSMUST00000111002.8 |
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| CDS CCA 72 bp | GACTGGGAGGAAGGAGACAATGTGTTCCACCAGCTCTaGGGGGAACAACTGAACAGAAATAGGGTTCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: DWEEGDNVFHQL*GEQLNRNRVPS Trigger: AGAGGGAACCCTATTTCTGTTCAGTTGTTCCCCCCAGAGCTGGTGGAACACATTGTCTCCTTCCTCCCAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031732.14 |
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