Pregenerated sensors for FBXO22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032309Ensembl transcript IDs: ENSMUST00000034859.15, ENSMUST00000140375.8, ENSMUST00000146201.8, ENSMUST00000153970.8
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACTCACTCTATAGACCAGGCTGGCCTCCAACTCAGAAATCTGCCTaGCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCACCAC | + |
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Preference number: 1 (lower is better) Translates to: NSLYRPGWPPTQKSA*LCLPSAGIKGAHHH Trigger: GTGGTGATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTGGAGGCCAGCCTGGTCTATAGAGTGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 ENSMUST00000153970.8 |
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| 3UTR GCA 90 bp | AAGCCAATGGTGTTCTGTTCAGGGATGTTGGCTGCTTTGAGGCGCTaGATAGCAGCCTCGACGGTCTTGGCATCATTTACATCCTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: KPMVFCSGMLAALRR*IAASTVLASFTSSV Trigger: CACTGAGGATGTAAATGATGCCAAGACCGTCGAGGCTGCTATGCAGCGCCTCAAAGCAGCCAACATCCCTGAACAGAACACCATTGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
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| 3UTR GCA 90 bp | GCATGCAAACATGAAGCCAATGGTGTTCTGTTCAGGGATGTTGGCTaGTTTGAGGCGCTGCATAGCAGCCTCGACGGTCTTGGCATCATT | + |
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Preference number: 1 (lower is better) Translates to: ACKHEANGVLFRDVG*FEALHSSLDGLGII Trigger: AATGATGCCAAGACCGTCGAGGCTGCTATGCAGCGCCTCAAAGCAGCCAACATCCCTGAACAGAACACCATTGGCTTCATGTTTGCATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
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| 3UTR TCA 90 bp | CTCAGTGAGGAGAACTGTGGCACTCTGGATTCGGTGCCCACTAAATaGCAGTCCAACCACACCTGTGGCATCAATATCCAGAGGGTTCTT | + |
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Preference number: 1 (lower is better) Translates to: LSEENCGTLDSVPTK*QSNHTCGINIQRVL Trigger: AAGAACCCTCTGGATATTGATGCCACAGGTGTGGTTGGACTGTCATTTAGTGGGCACCGAATCCAGAGTGCCACAGTTCTCCTCACTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
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| 3UTR GCA 90 bp | AACATTCCCCTTGGCTCTGTAGTACTGAAAGCCTCGGCCAACGCATaGAAACATGAAGCCAATGGTGTTCTGTTCAGGGATGTTGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: NIPLGSVVLKASANA*KHEANGVLFRDVGC Trigger: GCAGCCAACATCCCTGAACAGAACACCATTGGCTTCATGTTTGCATGCGTTGGCCGAGGCTTTCAGTACTACAGAGCCAAGGGGAATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
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| 3UTR GCA 90 bp | TCATTTACATCCTCAGTGAGGAGAACTGTGGCACTCTGGATTCGGTaGCCACTAAATGACAGTCCAACCACACCTGTGGCATCAATATCC | + |
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Preference number: 1 (lower is better) Translates to: SFTSSVRRTVALWIR*PLNDSPTTPVASIS Trigger: GGATATTGATGCCACAGGTGTGGTTGGACTGTCATTTAGTGGGCACCGAATCCAGAGTGCCACAGTTCTCCTCACTGAGGATGTAAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
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| 3UTR CCA 90 bp | AGGGCACATGCTGTCTCCATAGTAGTTCTCTTCCTCGCTCTTTTATaGCCACGACACTCTTCCAGGCTGATGAAAGTTTCAGAATCTGCC | + |
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Preference number: 1 (lower is better) Translates to: RAHAVSIVVLFLALL*PRHSSRLMKVSESA Trigger: GGCAGATTCTGAAACTTTCATCAGCCTGGAAGAGTGTCGTGGCCATAAAAGAGCGAGGAAGAGAACTACTATGGAGACAGCATGTGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153970.8 |
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| 3UTR CCA 90 bp | CTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCACCACGCCTaGCAATTTTCTCCTTTCTTAAGTCATGATTCTGCTAAAAGTTCA | + |
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Preference number: 1 (lower is better) Translates to: LCLPSAGIKGAHHHA*QFSPFLSHDSAKSS Trigger: TGAACTTTTAGCAGAATCATGACTTAAGAAAGGAGAAAATTGCCAGGCGTGGTGATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 ENSMUST00000153970.8 |
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| 3UTR CCA 90 bp | TCCAGAGGGTTCTTCTCACAAGTAAGTGAAGACAAATTGTCCACCTaGCCTCCAGCCAAGATGATATTCATATCGCTGAAAGTGCTGACT | + |
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Preference number: 1 (lower is better) Translates to: SRGFFSQVSEDKLST*PPAKMIFISLKVLT Trigger: AGTCAGCACTTTCAGCGATATGAATATCATCTTGGCTGGAGGCCAGGTGGACAATTTGTCTTCACTTACTTGTGAGAAGAACCCTCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
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| 3UTR GCA 90 bp | ATAAAGCAAAACCAGATTCTCCAATTTCTATTTCCTGAGGTCGATTaGTACCTGATCCCATTGGAGTCACCACAATTCCCGGGGTCACAA | + |
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Preference number: 1 (lower is better) Translates to: IKQNQILQFLFPEVD*YLIPLESPQFPGSQ Trigger: TTGTGACCCCGGGAATTGTGGTGACTCCAATGGGATCAGGTAGCAATCGACCTCAGGAAATAGAAATTGGAGAATCTGGTTTTGCTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153970.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCACCACGCCTAAACCTCCACCTTCCTaGTGGCCCTCAACCTCGCAG | + |
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Preference number: 2 (lower is better) Translates to: LPASASRVLGLKVRITTPKPPPS*WPSTSQ Trigger: CTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTT...AGGCGTGGTGATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 ENSMUST00000153970.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCACCACGCCTGGCAATTTTGCTGCTTTGAGGCGCTaGATAGCAGCCTCGACGGTC | + |
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Preference number: 2 (lower is better) Translates to: SASRVLGLKVRITTPGNFAALRR*IAASTV Trigger: GACCGTCGAGGCTGCTATGCAGCGCCTCAAAGCAGC...AAAATTGCCAGGCGTGGTGATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
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| 3UTR-3UTR GCA 90 bp | CTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCTCCAACTCAGAAATCTaGCTGCCTCTGCCTCCCGAG | + |
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Preference number: 2 (lower is better) Translates to: LRNLPASASRVLGLKVRISNSEI*LPLPPE Trigger: CTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTGGA...GATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 ENSMUST00000153970.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCACCACGCCTCTCTATAGACCAGGCTaGCCTCCAACTCAGAAATCT | + |
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Preference number: 2 (lower is better) Translates to: LPASASRVLGLKVRITTPLYRPG*PPTQKS Trigger: AGATTTCTGAGTTGGAGGCCAGCCTGGTCTATAGAG...AGGCGTGGTGATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 ENSMUST00000153970.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCACCACGCCTGGCAAGTCCAACCACACCTGTaGCATCAATATCCAGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: CLCLPSAGIKGAHHHAWQVQPHL*HQYPEG Trigger: ACCCTCTGGATATTGATGCCACAGGTGTGGTTGGAC...TTGCCAGGCGTGGTGATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCACCACGCCTGGCAACAGCCTCGACGGTCTTaGCATCATTTACATCCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: CLCLPSAGIKGAHHHAWQQPRRS*HHLHPQ Trigger: CTGAGGATGTAAATGATGCCAAGACCGTCGAGGCTG...TTGCCAGGCGTGGTGATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
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| 3UTR CAA 90 bp | GGGATGTTGGCTGCTTTGAGGCGCTGCATAGCAGCCTCGACGGTCTaGGCATCATTTACATCCTCAGTGAGGAGAACTGTGGCACTCTGG | + |
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Preference number: 2 (lower is better) Translates to: GMLAALRRCIAASTV*ASFTSSVRRTVALW Trigger: CCAGAGTGCCACAGTTCTCCTCACTGAGGATGTAAATGATGCCAAGACCGTCGAGGCTGCTATGCAGCGCCTCAAAGCAGCCAACATCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
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| 3UTR-3UTR TCA 90 bp | CTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCCAAAGTTACATGGTGTaGAAGGTGCTCTCAGCGAGG | + |
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Preference number: 2 (lower is better) Translates to: LRNLPASASRVLGLKVRIQSYMV*KVLSAR Trigger: CCTCGCTGAGAGCACCTTTCACACCATGTAACTTTG...GATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 ENSMUST00000153970.8 |
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| 3UTR-3UTR GCA 90 bp | CCCCTTGGCTCTGTAGTACTGAAAGCCTCGGCCAACGCATGCAAACATGAAGCCTTCAGGGATGTTGGCTaGTTTGAGGCGCTGCATAGC | + |
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Preference number: 2 (lower is better) Translates to: PLGSVVLKASANACKHEAFRDVG*FEALHS Trigger: GCTATGCAGCGCCTCAAAGCAGCCAACATCCCTGAA...GGCTTCATGTTTGCATGCGTTGGCCGAGGCTTTCAGTACTACAGAGCCAAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
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| 3UTR-3UTR GCA 90 bp | TATTTAAACCTCCACCTTCCTGGTGGCCCTCAACCTCGCAGGGCGCTTATGCAGGCCTCGGCCAACGCATaGAAACATGAAGCCAATGGT | + |
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Preference number: 2 (lower is better) Translates to: YLNLHLPGGPQPRRALMQASANA*KHEANG Trigger: ACCATTGGCTTCATGTTTGCATGCGTTGGCCGAGGC...CTGCATAAGCGCCCTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTTAAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
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| 3UTR-3UTR GCA 90 bp | CCCCTTGGCTCTGTAGTACTGAAAGCCTCGGCCAACGCATGCAAACATGAAGCCCCAAGGACTTGGCACTaGTTGGGGAAAAGCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: PLGSVVLKASANACKHEAPRTWH*LGKSFS Trigger: GGAGAAGCTTTTCCCCAAGCAGTGCCAAGTCCTTGG...GGCTTCATGTTTGCATGCGTTGGCCGAGGCTTTCAGTACTACAGAGCCAAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000153970.8 |
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| 3UTR-3UTR TCA 90 bp | CATCAAGCACTATTTAAACCTCCACCTTCCTGGTGGCCCTCAACCTCGCAGGGCCAAAGTTACATGGTGTaGAAGGTGCTCTCAGCGAGG | + |
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Preference number: 2 (lower is better) Translates to: HQALFKPPPSWWPSTSQGQSYMV*KVLSAR Trigger: CCTCGCTGAGAGCACCTTTCACACCATGTAACTTTG...GCCCTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTTAAATAGTGCTTGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 ENSMUST00000153970.8 |
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| 3UTR-3UTR TCA 90 bp | TATTTAAACCTCCACCTTCCTGGTGGCCCTCAACCTCGCAGGGCGCTTATGCAGCAAAGTTACATGGTGTaGAAGGTGCTCTCAGCGAGG | + |
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Preference number: 2 (lower is better) Translates to: YLNLHLPGGPQPRRALMQQSYMV*KVLSAR Trigger: CCTCGCTGAGAGCACCTTTCACACCATGTAACTTTG...CTGCATAAGCGCCCTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTTAAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 ENSMUST00000153970.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCGCGCATCACCACGCCTaGCAATTTTCTCCTTTCTTA | + |
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Preference number: 2 (lower is better) Translates to: LRNLPASASRVLGLKVRIAHHHA*QFSPFL Trigger: TAAGAAAGGAGAAAATTGCCAGGCGTGGTGATGCGC...GATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 ENSMUST00000153970.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCACCACGCCTGGCAATTTTGTCCAACCACACCTGTaGCATCAATATCCAGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: SASRVLGLKVRITTPGNFVQPHL*HQYPEG Trigger: ACCCTCTGGATATTGATGCCACAGGTGTGGTTGGAC...AAAATTGCCAGGCGTGGTGATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATTTCCTCGCTCTTTTATaGCCACGACACTCTTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: TQKSACLCLPSAGIKGAHFLALL*PRHSSR Trigger: CCTGGAAGAGTGTCGTGGCCATAAAAGAGCGAGGAA...ATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153970.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCACCACGCCTGGCAATTTTCTACCCCCAAAGTTACATaGTGTGAAAGGTGCTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: CLPSAGIKGAHHHAWQFSTPKVT*CERCSQ Trigger: CTGAGAGCACCTTTCACACCATGTAACTTTGGGGGT...AGAAAATTGCCAGGCGTGGTGATGCGCACCTTTAATCCCAGCACTCGGGAGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 ENSMUST00000153970.8 |
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| 3UTR CAA 90 bp | GCAAACATGAAGCCAATGGTGTTCTGTTCAGGGATGTTGGCTGCTTaGAGGCGCTGCATAGCAGCCTCGACGGTCTTGGCATCATTTACA | + |
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Preference number: 2 (lower is better) Translates to: ANMKPMVFCSGMLAA*RRCIAASTVLASFT Trigger: TGTAAATGATGCCAAGACCGTCGAGGCTGCTATGCAGCGCCTCAAAGCAGCCAACATCCCTGAACAGAACACCATTGGCTTCATGTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCATGATGGTTGTGTAGCTATGGAACAGGTCCTCTTCCTTTACCTCATTACAGCTGCTTTGAGGCGCTaGATAGCAGCCTCGACGGTC | + |
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Preference number: 2 (lower is better) Translates to: SHDGCVAMEQVLFLYLITAALRR*IAASTV Trigger: GACCGTCGAGGCTGCTATGCAGCGCCTCAAAGCAGC...TGTAATGAGGTAAAGGAAGAGGACCTGTTCCATAGCTACACAACCATCATGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
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| 3UTR-3UTR TCA 90 bp | CATCAAGCACTATTTAAACCTCCACCTTCCTGGTGGCCCTCAACCTCGCAGGGCCTTCTCACAAGTAAGTaGAGACAAATTGTCCACCTG | + |
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Preference number: 2 (lower is better) Translates to: HQALFKPPPSWWPSTSQGLLTSK*RQIVHL Trigger: CAGGTGGACAATTTGTCTTCACTTACTTGTGAGAAG...GCCCTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTTAAATAGTGCTTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
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| 3UTR-3UTR GCA 90 bp | AACATTCCCCTTGGCTCTGTAGTACTGAAAGCCTCGGCCAACGCATGCAAACATGCACTCTGGATTCGGTaGCCACTAAATGACAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: NIPLGSVVLKASANACKHALWIR*PLNDSP Trigger: TGGACTGTCATTTAGTGGGCACCGAATCCAGAGTGC...ATGTTTGCATGCGTTGGCCGAGGCTTTCAGTACTACAGAGCCAAGGGGAATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
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| 3UTR-3UTR TCA 90 bp | GTGAGGAGAACTGTGGCACTCTGGATTCGGTGCCCACTAAATGACAGTCCAACCCTTCTCACAAGTAAGTaGAGACAAATTGTCCACCTG | + |
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Preference number: 2 (lower is better) Translates to: VRRTVALWIRCPLNDSPTLLTSK*RQIVHL Trigger: CAGGTGGACAATTTGTCTTCACTTACTTGTGAGAAG...GGTTGGACTGTCATTTAGTGGGCACCGAATCCAGAGTGCCACAGTTCTCCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
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| 3UTR-3UTR CCA 90 bp | AACATTCCCCTTGGCTCTGTAGTACTGAAAGCCTCGGCCAACGCATGCAAACATACCCCCAAAGTTACATaGTGTGAAAGGTGCTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: NIPLGSVVLKASANACKHTPKVT*CERCSQ Trigger: CTGAGAGCACCTTTCACACCATGTAACTTTGGGGGT...ATGTTTGCATGCGTTGGCCGAGGCTTTCAGTACTACAGAGCCAAGGGGAATGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
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| 3UTR-3UTR GCA 90 bp | TTACATCTCCTCAGTATAAAGTTCCCAGTGACTATCCGGTCGCAGCCAATCTCCTTTCCTGAGGTCGATTaGTACCTGATCCCATTGGAG | + |
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Preference number: 2 (lower is better) Translates to: LHLLSIKFPVTIRSQPISFPEVD*YLIPLE Trigger: CTCCAATGGGATCAGGTAGCAATCGACCTCAGGAAA...GGAGATTGGCTGCGACCGGATAGTCACTGGGAACTTTATACTGAGGAGATGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153970.8 |
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| 3UTR-3UTR CCA 90 bp | AGTATAAAGTTCCCAGTGACTATCCGGTCGCAGCCAATCTCCCCATTTCCAAAGACCCCCAAAGTTACATaGTGTGAAAGGTGCTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: SIKFPVTIRSQPISPFPKTPKVT*CERCSQ Trigger: CTGAGAGCACCTTTCACACCATGTAACTTTGGGGGT...CTTTGGAAATGGGGAGATTGGCTGCGACCGGATAGTCACTGGGAACTTTATACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
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| 3UTR-3UTR TCA 90 bp | GACACTGGGAAAGAACTTTCTAAATGCATCAGCTTCAACATTCCCCTTGGCTCTCATTTACATCCTCAGTaGGGAGAACTGTGGCACTCT | + |
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Preference number: 2 (lower is better) Translates to: DTGKELSKCISFNIPLGSHLHPQ*GELWHS Trigger: AGAGTGCCACAGTTCTCCTCACTGAGGATGTAAATG...AGAGCCAAGGGGAATGTTGAAGCTGATGCATTTAGAAAGTTCTTTCCCAGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
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| 3UTR-3UTR CCA 90 bp | GCGCATCACCACGCCTGGCAATTTTCTCCTTTCTTAAGTCATGATTCTGCTAAAGACAAATTGTCCACCTaGCCTCCAGCCAAGATGATA | + |
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Preference number: 2 (lower is better) Translates to: AHHHAWQFSPFLSHDSAKDKLST*PPAKMI Trigger: TATCATCTTGGCTGGAGGCCAGGTGGACAATTTGTC...TTTAGCAGAATCATGACTTAAGAAAGGAGAAAATTGCCAGGCGTGGTGATGCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
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| 3UTR CAA 90 bp | GCATCAATATCCAGAGGGTTCTTCTCACAAGTAAGTGAAGACAAATaGTCCACCTGGCCTCCAGCCAAGATGATATTCATATCGCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: ASISRGFFSQVSEDK*STWPPAKMIFISLK Trigger: TTTCAGCGATATGAATATCATCTTGGCTGGAGGCCAGGTGGACAATTTGTCTTCACTTACTTGTGAGAAGAACCCTCTGGATATTGATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
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| 3UTR-3UTR TCA 90 bp | GCATCAATATCCAGAGGGTTCTTCTCACAAGTAAGTGAAGACAAATTGTCCACCCAACGCATGCAAACATaGAGCCAATGGTGTTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: ASISRGFFSQVSEDKLSTQRMQT*SQWCSV Trigger: AACAGAACACCATTGGCTTCATGTTTGCATGCGTTG...GGTGGACAATTTGTCTTCACTTACTTGTGAGAAGAACCCTCTGGATATTGATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGTACAAACAAAATATGGTGATGATTTTCAGAACTGTGTGATAAAGGCTGTTTCCAACTCAGAAATCTaGCTGCCTCTGCCTCCCGAG | + |
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Preference number: 2 (lower is better) Translates to: GVQTKYGDDFQNCVIKAVSNSEI*LPLPPE Trigger: CTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTGGA...AACAGCCTTTATCACACAGTTCTGAAAATCATCACCATATTTTGTTTGTACACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 ENSMUST00000153970.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGATAAAGGCTGTTCCCTTGCAGTCTCTTTACTATGAAGAGGAAAAAGCTGATGCAGGTAATTACTaGCTCCCACCTTACAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: CVIKAVPLQSLYYEEEKADAGNY*LPPYSS Trigger: ACTGCTGTAAGGTGGGAGCCAGTAATTACCTGCATC...AGCTTTTTCCTCTTCATAGTAAAGAGACTGCAAGGGAACAGCCTTTATCACACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCACTTCTTGACTTGTGTGCTTACAATGTTAATGCTGTCCTTCATCTATGTAACCCCCAAAGTTACATaGTGTGAAAGGTGCTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: PHFLTCVLTMLMLSFIYVTPKVT*CERCSQ Trigger: CTGAGAGCACCTTTCACACCATGTAACTTTGGGGGT...TACATAGATGAAGGACAGCATTAACATTGTAAGCACACAAGTCAAGAAGTGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 ENSMUST00000153970.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGTACAAACAAAATATGGTGATGATTTTCAGAACTGTGTGATAAAGGCTGTTCTTCAACATTCCCCTTaGCTCTGTAGTACTGAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: GVQTKYGDDFQNCVIKAVLQHSP*LCSTES Trigger: GCTTTCAGTACTACAGAGCCAAGGGGAATGTTGAAG...AACAGCCTTTATCACACAGTTCTGAAAATCATCACCATATTTTGTTTGTACACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
||
| 3UTR GCA 72 bp | CCAGGCTGGCCTCCAACTCAGAAATCTGCCTGCCTCTaGCTCCCGAGTGCTGGGATTAAAGGTGCGCATCAC | + |
|
Preference number: 3 (lower is better) Translates to: PGWPPTQKSACL*LPSAGIKGAHH Trigger: GTGATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTGGAGGCCAGCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 ENSMUST00000153970.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCACCACGCCTGGCAATTCTGTTCAGGGATGTaGGCTGCTTTGAGGCGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: CLCLPSAGIKGAHHHAWQFCSGM*AALRRC Trigger: GCAGCGCCTCAAAGCAGCCAACATCCCTGAACAGAA...TTGCCAGGCGTGGTGATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
||
| 3UTR-3UTR CAA 90 bp | TATTTAAACCTCCACCTTCCTGGTGGCCCTCAACCTCGCAGGGCGCTTATGCAGGGGATGTTGGCTGCTTaGAGGCGCTGCATAGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: YLNLHLPGGPQPRRALMQGMLAA*RRCIAA Trigger: GGCTGCTATGCAGCGCCTCAAAGCAGCCAACATCCC...CTGCATAAGCGCCCTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTTAAATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCACCACGCCTCCACAGCCTCACTTCTaGACTTGTGTGCTTACAATG | + |
|
Preference number: 3 (lower is better) Translates to: LPASASRVLGLKVRITTPPQPHF*TCVLTM Trigger: CATTGTAAGCACACAAGTCAAGAAGTGAGGCTGTGG...AGGCGTGGTGATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 ENSMUST00000153970.8 |
||
| 3UTR GCA 72 bp | TATAGACCAGGCTGGCCTCCAACTCAGAAATCTGCCTaGCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCG | + |
|
Preference number: 3 (lower is better) Translates to: YRPGWPPTQKSA*LCLPSAGIKGA Trigger: CGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTGGAGGCCAGCCTGGTCTATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 ENSMUST00000153970.8 |
||
| 3UTR TCA 72 bp | CAGCCTCGACGGTCTTGGCATCATTTACATCCTCAGTaGGGAGAACTGTGGCACTCTGGATTCGGTGCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: QPRRSWHHLHPQ*GELWHSGFGAH Trigger: GTGGGCACCGAATCCAGAGTGCCACAGTTCTCCTCACTGAGGATGTAAATGATGCCAAGACCGTCGAGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCACCACGCCTGGCAATTTTCTGTAAGTGAAGACAAATaGTCCACCTGGCCTCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: CLPSAGIKGAHHHAWQFSVSEDK*STWPPA Trigger: GGCTGGAGGCCAGGTGGACAATTTGTCTTCACTTAC...AGAAAATTGCCAGGCGTGGTGATGCGCACCTTTAATCCCAGCACTCGGGAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
||
| 3UTR GCA 72 bp | TCCTCAGTGAGGAGAACTGTGGCACTCTGGATTCGGTaGCCACTAAATGACAGTCCAACCACACCTGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SSVRRTVALWIR*PLNDSPTTPVA Trigger: TGCCACAGGTGTGGTTGGACTGTCATTTAGTGGGCACCGAATCCAGAGTGCCACAGTTCTCCTCACTGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
||
| 3UTR GCA 72 bp | CATGAAGCCAATGGTGTTCTGTTCAGGGATGTTGGCTaGTTTGAGGCGCTGCATAGCAGCCTCGACGGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: HEANGVLFRDVG*FEALHSSLDGL Trigger: AAGACCGTCGAGGCTGCTATGCAGCGCCTCAAAGCAGCCAACATCCCTGAACAGAACACCATTGGCTTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTAAACCTCCACCTTCCTGGTGGCCCTCAACCTCGCAGGGCGCTTATGCAGTGCCACAGCCTCACTTCTaGACTTGTGTGCTTACAATG | + |
|
Preference number: 3 (lower is better) Translates to: FKPPPSWWPSTSQGAYAVPQPHF*TCVLTM Trigger: CATTGTAAGCACACAAGTCAAGAAGTGAGGCTGTGG...CACTGCATAAGCGCCCTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 ENSMUST00000153970.8 |
||
| 3UTR GCA 72 bp | GTGTTCTGTTCAGGGATGTTGGCTGCTTTGAGGCGCTaGATAGCAGCCTCGACGGTCTTGGCATCATTTACA | + |
|
Preference number: 3 (lower is better) Translates to: VFCSGMLAALRR*IAASTVLASFT Trigger: TGTAAATGATGCCAAGACCGTCGAGGCTGCTATGCAGCGCCTCAAAGCAGCCAACATCCCTGAACAGAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCACCACGCCTGGCAATTTTCTCCACAGCCTCACTTCTaGACTTGTGTGCTTACAATG | + |
|
Preference number: 3 (lower is better) Translates to: CLPSAGIKGAHHHAWQFSPQPHF*TCVLTM Trigger: CATTGTAAGCACACAAGTCAAGAAGTGAGGCTGTGG...AGAAAATTGCCAGGCGTGGTGATGCGCACCTTTAATCCCAGCACTCGGGAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 ENSMUST00000153970.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCATCAAGCACTATTTAAACCTCCACCTTCCTGGTGGCCCTCAACCTCGCAGGCAGCCTCGACGGTCTaGGCATCATTTACATCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: VHQALFKPPPSWWPSTSQAASTV*ASFTSS Trigger: TGAGGATGTAAATGATGCCAAGACCGTCGAGGCTGC...CTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTTAAATAGTGCTTGATGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
||
| 3UTR TCA 72 bp | GAGAACTGTGGCACTCTGGATTCGGTGCCCACTAAATaGCAGTCCAACCACACCTGTGGCATCAATATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: ENCGTLDSVPTK*QSNHTCGINIQ Trigger: CTGGATATTGATGCCACAGGTGTGGTTGGACTGTCATTTAGTGGGCACCGAATCCAGAGTGCCACAGTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCGCCTCACTTCTTGACTaGTGTGCTTACAATGTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: LRNLPASASRVLGLKVRIASLLD*CAYNVN Trigger: ATTAACATTGTAAGCACACAAGTCAAGAAGTGAGGC...GATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 ENSMUST00000153970.8 |
||
| 3UTR TCA 72 bp | TGTAGTACTGAAAGCCTCGGCCAACGCATGCAAACATaGAGCCAATGGTGTTCTGTTCAGGGATGTTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: CSTESLGQRMQT*SQWCSVQGCWL Trigger: CAGCCAACATCCCTGAACAGAACACCATTGGCTTCATGTTTGCATGCGTTGGCCGAGGCTTTCAGTACTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
||
| 3UTR GCA 72 bp | CTTGGCTCTGTAGTACTGAAAGCCTCGGCCAACGCATaGAAACATGAAGCCAATGGTGTTCTGTTCAGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: LGSVVLKASANA*KHEANGVLFRD Trigger: ATCCCTGAACAGAACACCATTGGCTTCATGTTTGCATGCGTTGGCCGAGGCTTTCAGTACTACAGAGCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
||
| 3UTR GCA 72 bp | TTGGCACTGCTTGGGGAAAAGCTTCTCCAGGGCACATaGTGTCTCCATAGTAGTTCTCTTCCTCGCTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LALLGEKLLQGT*CLHSSSLPRSF Trigger: AAAAGAGCGAGGAAGAGAACTACTATGGAGACAGCATGTGCCCTGGAGAAGCTTTTCCCCAAGCAGTGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153970.8 |
||
| 3UTR TCA 72 bp | TTCTCCAATTTCTATTTCCTGAGGTCGATTGCTACCTaGTCCCATTGGAGTCACCACAATTCCCGGGGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: FSNFYFLRSIAT*SHWSHHNSRGH Trigger: GTGACCCCGGGAATTGTGGTGACTCCAATGGGATCAGGTAGCAATCGACCTCAGGAAATAGAAATTGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153970.8 |
||
| 3UTR CCA 72 bp | CCGAGTGCTGGGATTAAAGGTGCGCATCACCACGCCTaGCAATTTTCTCCTTTCTTAAGTCATGATTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: PSAGIKGAHHHA*QFSPFLSHDSA Trigger: AGCAGAATCATGACTTAAGAAAGGAGAAAATTGCCAGGCGTGGTGATGCGCACCTTTAATCCCAGCACTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 ENSMUST00000153970.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCATGATGGTTGTGTAGCTATGGAACAGGTCCTCTTCCTTTACCTCATTACAGTAAGTGAAGACAAATaGTCCACCTGGCCTCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SHDGCVAMEQVLFLYLITVSEDK*STWPPA Trigger: GGCTGGAGGCCAGGTGGACAATTTGTCTTCACTTAC...TGTAATGAGGTAAAGGAAGAGGACCTGTTCCATAGCTACACAACCATCATGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGTGCGCATCACCACGCCTGGCAATTTTCTCCTTTCTTAAGTCATGATTCTGCAGCCTCGACGGTCTaGGCATCATTTACATCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: KGAHHHAWQFSPFLSHDSAASTV*ASFTSS Trigger: TGAGGATGTAAATGATGCCAAGACCGTCGAGGCTGC...AGAATCATGACTTAAGAAAGGAGAAAATTGCCAGGCGTGGTGATGCGCACCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
||
| 3UTR TCA 72 bp | GGCATCAATATCCAGAGGGTTCTTCTCACAAGTAAGTaGAGACAAATTGTCCACCTGGCCTCCAGCCAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: GINIQRVLLTSK*RQIVHLASSQD Trigger: ATCTTGGCTGGAGGCCAGGTGGACAATTTGTCTTCACTTACTTGTGAGAAGAACCCTCTGGATATTGATGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
||
| 3UTR CCA 72 bp | GCTGTCTCCATAGTAGTTCTCTTCCTCGCTCTTTTATaGCCACGACACTCTTCCAGGCTGATGAAAGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: AVSIVVLFLALL*PRHSSRLMKVS Trigger: TGAAACTTTCATCAGCCTGGAAGAGTGTCGTGGCCATAAAAGAGCGAGGAAGAGAACTACTATGGAGACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153970.8 |
||
| 3UTR-3UTR CAA 90 bp | GCGCATCACCACGCCTGGCAATTTTCTCCTTTCTTAAGTCATGATTCTGCTAAACCACAGCCTCACTTCTaGACTTGTGTGCTTACAATG | + |
|
Preference number: 3 (lower is better) Translates to: AHHHAWQFSPFLSHDSAKPQPHF*TCVLTM Trigger: CATTGTAAGCACACAAGTCAAGAAGTGAGGCTGTGG...TTTAGCAGAATCATGACTTAAGAAAGGAGAAAATTGCCAGGCGTGGTGATGCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 ENSMUST00000153970.8 |
||
| 3UTR GCA 72 bp | AACCAGATTCTCCAATTTCTATTTCCTGAGGTCGATTaGTACCTGATCCCATTGGAGTCACCACAATTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: NQILQFLFPEVD*YLIPLESPQFP Trigger: CGGGAATTGTGGTGACTCCAATGGGATCAGGTAGCAATCGACCTCAGGAAATAGAAATTGGAGAATCTGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153970.8 |
||
| 3UTR CCA 72 bp | AGTTCAGGGTTGTCCAGAAGACCTACTTCAGTAAGCTaGTGTCTTTCGAGTGTTAAATTCTTGGAGTCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: SSGLSRRPTSVS*CLSSVKFLESL Trigger: TAAGGACTCCAAGAATTTAACACTCGAAAGACACCAGCTTACTGAAGTAGGTCTTCTGGACAACCCTGAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153970.8 |
||
| 3UTR TCA 72 bp | AATAAAGCAAAACCAGATTCTCCAATTTCTATTTCCTaGGGTCGATTGCTACCTGATCCCATTGGAGTCACC | + |
|
Preference number: 3 (lower is better) Translates to: NKAKPDSPISIS*GRLLPDPIGVT Trigger: GGTGACTCCAATGGGATCAGGTAGCAATCGACCTCAGGAAATAGAAATTGGAGAATCTGGTTTTGCTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153970.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCACCACGCCTAGGTCGATTGCTACCTaGTCCCATTGGAGTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LPASASRVLGLKVRITTPRSIAT*SHWSHH Trigger: GTGGTGACTCCAATGGGATCAGGTAGCAATCGACCT...AGGCGTGGTGATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR GCA 90 bp | GTTGGCTGCTTTGAGGCGCTGCATAGCAGCCTCGACGGTCTTGGCATCATTTACGGGTCCGCAGCACTCTaGGTACACACTCCCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VGCFEALHSSLDGLGIIYGSAAL*VHTPST Trigger: TGTGGAGGGAGTGTGTACGCAGAGTGCTGCGGACCC...GTAAATGATGCCAAGACCGTCGAGGCTGCTATGCAGCGCCTCAAAGCAGCCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
||
| CDS-3UTR GCA 90 bp | ACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATGCTGCTTTGAGGCGCTaGATAGCAGCCTCGACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TQKSACLCLPSAGIKGAHAALRR*IAASTV Trigger: GACCGTCGAGGCTGCTATGCAGCGCCTCAAAGCAGC...ATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR GCA 90 bp | TGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCACCACGCCTGGCAATTTTCTGCTGCTTTGAGGCGCTaGATAGCAGCCTCGACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CLPSAGIKGAHHHAWQFSAALRR*IAASTV Trigger: GACCGTCGAGGCTGCTATGCAGCGCCTCAAAGCAGC...AGAAAATTGCCAGGCGTGGTGATGCGCACCTTTAATCCCAGCACTCGGGAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR GCA 90 bp | TGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCACCACGCCTGGCAAGCCTCGGCCAACGCATaGAAACATGAAGCCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLCLPSAGIKGAHHHAWQASANA*KHEANG Trigger: ACCATTGGCTTCATGTTTGCATGCGTTGGCCGAGGC...TTGCCAGGCGTGGTGATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCACCACGCCTGATGCAGGTAATTACTaGCTCCCACCTTACAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPASASRVLGLKVRITTPDAGNY*LPPYSS Trigger: ACTGCTGTAAGGTGGGAGCCAGTAATTACCTGCATC...AGGCGTGGTGATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR TCA 90 bp | TTTAAACCTCCACCTTCCTGGTGGCCCTCAACCTCGCAGGGCGCTTATGCAGTGTCGGTGCCCACTAAATaGCAGTCCAACCACACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FKPPPSWWPSTSQGAYAVSVPTK*QSNHTC Trigger: ACAGGTGTGGTTGGACTGTCATTTAGTGGGCACCGA...CACTGCATAAGCGCCCTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTTAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR GCA 90 bp | TTTAAACCTCCACCTTCCTGGTGGCCCTCAACCTCGCAGGGCGCTTATGCAGTGCCAAGGACTTGGCACTaGTTGGGGAAAAGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FKPPPSWWPSTSQGAYAVPRTWH*LGKSFS Trigger: GGAGAAGCTTTTCCCCAAGCAGTGCCAAGTCCTTGG...CACTGCATAAGCGCCCTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 |
||
| CDS-3UTR GCA 90 bp | CAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCTTCAGGGATGTTGGCTaGTTTGAGGCGCTGCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: QLRNLPASASRVLGLKVRFRDVG*FEALHS Trigger: GCTATGCAGCGCCTCAAAGCAGCCAACATCCCTGAA...GCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR GCA 90 bp | TTTAAACCTCCACCTTCCTGGTGGCCCTCAACCTCGCAGGGCGCTTATGCAGTGGCCTCGGCCAACGCATaGAAACATGAAGCCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: FKPPPSWWPSTSQGAYAVASANA*KHEANG Trigger: ACCATTGGCTTCATGTTTGCATGCGTTGGCCGAGGC...CACTGCATAAGCGCCCTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTTAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| 3UTR CAA 72 bp | AAGCCAATGGTGTTCTGTTCAGGGATGTTGGCTGCTTaGAGGCGCTGCATAGCAGCCTCGACGGTCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPMVFCSGMLAA*RRCIAASTVLA Trigger: TGCCAAGACCGTCGAGGCTGCTATGCAGCGCCTCAAAGCAGCCAACATCCCTGAACAGAACACCATTGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140375.8 ENSMUST00000153970.8 |
||
| CDS-3UTR TCA 90 bp | TCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCACCACGCCTGGCAATTTTTCGGTGCCCACTAAATaGCAGTCCAACCACACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SASRVLGLKVRITTPGNFSVPTK*QSNHTC Trigger: ACAGGTGTGGTTGGACTGTCATTTAGTGGGCACCGA...AAAATTGCCAGGCGTGGTGATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR GCA 90 bp | CATAGCAGCCTCGACGGTCTTGGCATCATTTACATCCTCAGTGAGGAGAACTGTAGATCCAGGTCACGCTaGGATGGGTCCGCAGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: HSSLDGLGIIYILSEENCRSRSR*DGSAAL Trigger: GAGTGCTGCGGACCCATCGCAGCGTGACCTGGATCT...ACAGTTCTCCTCACTGAGGATGTAAATGATGCCAAGACCGTCGAGGCTGCTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140375.8 |
||
| CDS-3UTR GCA 90 bp | CATCAAGCACTATTTAAACCTCCACCTTCCTGGTGGCCCTCAACCTCGCAGGGCCCAAGGACTTGGCACTaGTTGGGGAAAAGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HQALFKPPPSWWPSTSQGPRTWH*LGKSFS Trigger: GGAGAAGCTTTTCCCCAAGCAGTGCCAAGTCCTTGG...GCCCTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTTAAATAGTGCTTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 |
||
| CDS-3UTR GCA 90 bp | ACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCCAAGGACTTGGCACTaGTTGGGGAAAAGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TQKSACLCLPSAGIKGAHPRTWH*LGKSFS Trigger: GGAGAAGCTTTTCCCCAAGCAGTGCCAAGTCCTTGG...ATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 |
||
| CDS-3UTR GCA 90 bp | CATCAAGCACTATTTAAACCTCCACCTTCCTGGTGGCCCTCAACCTCGCAGGGCTTCAGGGATGTTGGCTaGTTTGAGGCGCTGCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: HQALFKPPPSWWPSTSQGFRDVG*FEALHS Trigger: GCTATGCAGCGCCTCAAAGCAGCCAACATCCCTGAA...GCCCTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTTAAATAGTGCTTGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCTTCCTCGCTCTTTTATaGCCACGACACTCTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRNLPASASRVLGLKVRIFLALL*PRHSSR Trigger: CCTGGAAGAGTGTCGTGGCCATAAAAGAGCGAGGAA...GATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 |
||
| CDS-3UTR CCA 90 bp | CAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCGTCCAACCACACCTGTaGCATCAATATCCAGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QLRNLPASASRVLGLKVRVQPHL*HQYPEG Trigger: ACCCTCTGGATATTGATGCCACAGGTGTGGTTGGAC...GCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR TCA 90 bp | TTTAAACCTCCACCTTCCTGGTGGCCCTCAACCTCGCAGGGCGCTTATGCAGTGCATTTACATCCTCAGTaGGGAGAACTGTGGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: FKPPPSWWPSTSQGAYAVHLHPQ*GELWHS Trigger: AGAGTGCCACAGTTCTCCTCACTGAGGATGTAAATG...CACTGCATAAGCGCCCTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR TCA 90 bp | CATCAAGCACTATTTAAACCTCCACCTTCCTGGTGGCCCTCAACCTCGCAGGGCTTAGAGGTTCCCAGGTaGACGAGAGCCATGATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HQALFKPPPSWWPSTSQGLEVPR*TRAMMV Trigger: AACCATCATGGCTCTCGTTCACCTGGGAACCTCTAA...GCCCTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTTAAATAGTGCTTGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR GCA 90 bp | CATCAAGCACTATTTAAACCTCCACCTTCCTGGTGGCCCTCAACCTCGCAGGGCGCACTCTGGATTCGGTaGCCACTAAATGACAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HQALFKPPPSWWPSTSQGALWIR*PLNDSP Trigger: TGGACTGTCATTTAGTGGGCACCGAATCCAGAGTGC...GCCCTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTTAAATAGTGCTTGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR TCA 90 bp | GTTCATCAAGCACTATTTAAACCTCCACCTTCCTGGTGGCCCTCAACCTCGCAGAGGTCGATTGCTACCTaGTCCCATTGGAGTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: VHQALFKPPPSWWPSTSQRSIAT*SHWSHH Trigger: GTGGTGACTCCAATGGGATCAGGTAGCAATCGACCT...CTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTTAAATAGTGCTTGATGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR CCA 90 bp | TATTTAAACCTCCACCTTCCTGGTGGCCCTCAACCTCGCAGGGCGCTTATGCAGCTTCAACATTCCCCTTaGCTCTGTAGTACTGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: YLNLHLPGGPQPRRALMQLQHSP*LCSTES Trigger: GCTTTCAGTACTACAGAGCCAAGGGGAATGTTGAAG...CTGCATAAGCGCCCTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTTAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR TCA 90 bp | CATCAAGCACTATTTAAACCTCCACCTTCCTGGTGGCCCTCAACCTCGCAGGGCCCAATTTCTATTTCCTaGGGTCGATTGCTACCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HQALFKPPPSWWPSTSQGPISIS*GRLLPD Trigger: ATCAGGTAGCAATCGACCTCAGGAAATAGAAATTGG...GCCCTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTTAAATAGTGCTTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR TCA 90 bp | GTTCATCAAGCACTATTTAAACCTCCACCTTCCTGGTGGCCCTCAACCTCGCAGCATTTACATCCTCAGTaGGGAGAACTGTGGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VHQALFKPPPSWWPSTSQHLHPQ*GELWHS Trigger: AGAGTGCCACAGTTCTCCTCACTGAGGATGTAAATG...CTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTTAAATAGTGCTTGATGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGAAGACCTACTTCAGTAAGCTGGTGTCTTTCGAGTGTTAAATTCTTGGAGGGGTCCGCAGCACTCTaGGTACACACTCCCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SRRPTSVSWCLSSVKFLEGSAAL*VHTPST Trigger: TGTGGAGGGAGTGTGTACGCAGAGTGCTGCGGACCC...CTCCAAGAATTTAACACTCGAAAGACACCAGCTTACTGAAGTAGGTCTTCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153970.8 |
||
| CDS-3UTR CCA 90 bp | GTTCATCAAGCACTATTTAAACCTCCACCTTCCTGGTGGCCCTCAACCTCGCAGCTTCAACATTCCCCTTaGCTCTGTAGTACTGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VHQALFKPPPSWWPSTSQLQHSP*LCSTES Trigger: GCTTTCAGTACTACAGAGCCAAGGGGAATGTTGAAG...CTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTTAAATAGTGCTTGATGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR GCA 90 bp | CCTCACTTCTTGACTTGTGTGCTTACAATGTTAATGCTGTCCTTCATCTATGTAGGGTCCGCAGCACTCTaGGTACACACTCCCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PHFLTCVLTMLMLSFIYVGSAAL*VHTPST Trigger: TGTGGAGGGAGTGTGTACGCAGAGTGCTGCGGACCC...TACATAGATGAAGGACAGCATTAACATTGTAAGCACACAAGTCAAGAAGTGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000153970.8 |
||
| CDS-3UTR GCA 90 bp | CCTCACTTCTTGACTTGTGTGCTTACAATGTTAATGCTGTCCTTCATCTATGTAAGATCCAGGTCACGCTaGGATGGGTCCGCAGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: PHFLTCVLTMLMLSFIYVRSRSR*DGSAAL Trigger: GAGTGCTGCGGACCCATCGCAGCGTGACCTGGATCT...TACATAGATGAAGGACAGCATTAACATTGTAAGCACACAAGTCAAGAAGTGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 |
||
| CDS-3UTR CCA 90 bp | GTTCATCAAGCACTATTTAAACCTCCACCTTCCTGGTGGCCCTCAACCTCGCAGCCTACTTCAGTAAGCTaGTGTCTTTCGAGTGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VHQALFKPPPSWWPSTSQPTSVS*CLSSVK Trigger: TTTAACACTCGAAAGACACCAGCTTACTGAAGTAGG...CTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTTAAATAGTGCTTGATGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR GCA 90 bp | CCACAGCCTCACTTCTTGACTTGTGTGCTTACAATGTTAATGCTGTCCTTCATCTTTCCTGAGGTCGATTaGTACCTGATCCCATTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PQPHFLTCVLTMLMLSFIFPEVD*YLIPLE Trigger: CTCCAATGGGATCAGGTAGCAATCGACCTCAGGAAA...GATGAAGGACAGCATTAACATTGTAAGCACACAAGTCAAGAAGTGAGGCTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR CCA 90 bp | CCACAGCCTCACTTCTTGACTTGTGTGCTTACAATGTTAATGCTGTCCTTCATCGACAAATTGTCCACCTaGCCTCCAGCCAAGATGATA | + |
|
Preference number: 4 (lower is better) Translates to: PQPHFLTCVLTMLMLSFIDKLST*PPAKMI Trigger: TATCATCTTGGCTGGAGGCCAGGTGGACAATTTGTC...GATGAAGGACAGCATTAACATTGTAAGCACACAAGTCAAGAAGTGAGGCTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR TCA 90 bp | GCCTCACTTCTTGACTTGTGTGCTTACAATGTTAATGCTGTCCTTCATCTATGTTTAGAGGTTCCCAGGTaGACGAGAGCCATGATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ASLLDLCAYNVNAVLHLCLEVPR*TRAMMV Trigger: AACCATCATGGCTCTCGTTCACCTGGGAACCTCTAA...ACATAGATGAAGGACAGCATTAACATTGTAAGCACACAAGTCAAGAAGTGAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR GCA 90 bp | AAAAATCATCCCAAAGTGACCTCAGAGCGTCACCCAAAGCTACAAAACACACATTTTCCTGAGGTCGATTaGTACCTGATCCCATTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KNHPKVTSERHPKLQNTHFPEVD*YLIPLE Trigger: CTCCAATGGGATCAGGTAGCAATCGACCTCAGGAAA...ATGTGTGTTTTGTAGCTTTGGGTGACGCTCTGAGGTCACTTTGGGATGATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR GCA 90 bp | GCCTCACTTCTTGACTTGTGTGCTTACAATGTTAATGCTGTCCTTCATCTATGTGCACTCTGGATTCGGTaGCCACTAAATGACAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASLLDLCAYNVNAVLHLCALWIR*PLNDSP Trigger: TGGACTGTCATTTAGTGGGCACCGAATCCAGAGTGC...ACATAGATGAAGGACAGCATTAACATTGTAAGCACACAAGTCAAGAAGTGAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR GCA 90 bp | GTTCATCAAGCACTATTTAAACCTCCACCTTCCTGGTGGCCCTCAACCTCGCAGAAAGAACTTTCTAAATaGATCAGCTTCAACATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VHQALFKPPPSWWPSTSQKELSK*ISFNIP Trigger: GGGAATGTTGAAGCTGATGCATTTAGAAAGTTCTTT...CTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTTAAATAGTGCTTGATGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR CCA 90 bp | GCCTCACTTCTTGACTTGTGTGCTTACAATGTTAATGCTGTCCTTCATCTATGTGTCCAACCACACCTGTaGCATCAATATCCAGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ASLLDLCAYNVNAVLHLCVQPHL*HQYPEG Trigger: ACCCTCTGGATATTGATGCCACAGGTGTGGTTGGAC...ACATAGATGAAGGACAGCATTAACATTGTAAGCACACAAGTCAAGAAGTGAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGATAAAGGCTGTTCCCTTGCAGTCTCTTTACTATGAAGAGGAAAAAGCTCAGCCTCGACGGTCTTaGCATCATTTACATCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CVIKAVPLQSLYYEEEKAQPRRS*HHLHPQ Trigger: CTGAGGATGTAAATGATGCCAAGACCGTCGAGGCTG...AGCTTTTTCCTCTTCATAGTAAAGAGACTGCAAGGGAACAGCCTTTATCACACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR TCA 90 bp | TGTGTGATAAAGGCTGTTCCCTTGCAGTCTCTTTACTATGAAGAGGAAAAAGCTCAACGCATGCAAACATaGAGCCAATGGTGTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CVIKAVPLQSLYYEEEKAQRMQT*SQWCSV Trigger: AACAGAACACCATTGGCTTCATGTTTGCATGCGTTG...AGCTTTTTCCTCTTCATAGTAAAGAGACTGCAAGGGAACAGCCTTTATCACACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
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| CDS-3UTR TCA 90 bp | CCTCACTTCTTGACTTGTGTGCTTACAATGTTAATGCTGTCCTTCATCTATGTACAACGCATGCAAACATaGAGCCAATGGTGTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PHFLTCVLTMLMLSFIYVQRMQT*SQWCSV Trigger: AACAGAACACCATTGGCTTCATGTTTGCATGCGTTG...TACATAGATGAAGGACAGCATTAACATTGTAAGCACACAAGTCAAGAAGTGAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
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| CDS-3UTR CCA 90 bp | GGTGTACAAACAAAATATGGTGATGATTTTCAGAACTGTGTGATAAAGGCTGTTTTCCTCGCTCTTTTATaGCCACGACACTCTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVQTKYGDDFQNCVIKAVFLALL*PRHSSR Trigger: CCTGGAAGAGTGTCGTGGCCATAAAAGAGCGAGGAA...AACAGCCTTTATCACACAGTTCTGAAAATCATCACCATATTTTGTTTGTACACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 |
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| CDS-3UTR TCA 90 bp | CCTCACTTCTTGACTTGTGTGCTTACAATGTTAATGCTGTCCTTCATCTATGTACCAATTTCTATTTCCTaGGGTCGATTGCTACCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PHFLTCVLTMLMLSFIYVPISIS*GRLLPD Trigger: ATCAGGTAGCAATCGACCTCAGGAAATAGAAATTGG...TACATAGATGAAGGACAGCATTAACATTGTAAGCACACAAGTCAAGAAGTGAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
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| CDS-3UTR CCA 90 bp | TCACTTCTTGACTTGTGTGCTTACAATGTTAATGCTGTCCTTCATCTATGTATTGACAAATTGTCCACCTaGCCTCCAGCCAAGATGATA | + |
|
Preference number: 4 (lower is better) Translates to: SLLDLCAYNVNAVLHLCIDKLST*PPAKMI Trigger: TATCATCTTGGCTGGAGGCCAGGTGGACAATTTGTC...AATACATAGATGAAGGACAGCATTAACATTGTAAGCACACAAGTCAAGAAGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
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| CDS-3UTR CCA 90 bp | CCTCACTTCTTGACTTGTGTGCTTACAATGTTAATGCTGTCCTTCATCTATGTACCTACTTCAGTAAGCTaGTGTCTTTCGAGTGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PHFLTCVLTMLMLSFIYVPTSVS*CLSSVK Trigger: TTTAACACTCGAAAGACACCAGCTTACTGAAGTAGG...TACATAGATGAAGGACAGCATTAACATTGTAAGCACACAAGTCAAGAAGTGAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| 3UTR CAA 72 bp | GATGATTTTCAGAACTGTGTGATAAAGGCTGTTCCCTaGCAGTCTCTTTACTATGAAGAGGAAAAAGCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: DDFQNCVIKAVP*QSLYYEEEKAN Trigger: GTTAGCTTTTTCCTCTTCATAGTAAAGAGACTGCAAGGGAACAGCCTTTATCACACAGTTCTGAAAATCATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 ENSMUST00000153970.8 |
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| CDS-3UTR GCA 90 bp | GGTGTACAAACAAAATATGGTGATGATTTTCAGAACTGTGTGATAAAGGCTGTTAAAGAACTTTCTAAATaGATCAGCTTCAACATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GVQTKYGDDFQNCVIKAVKELSK*ISFNIP Trigger: GGGAATGTTGAAGCTGATGCATTTAGAAAGTTCTTT...AACAGCCTTTATCACACAGTTCTGAAAATCATCACCATATTTTGTTTGTACACC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
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| CDS GCA 90 bp | CCAGGTGGCCCGCTTCAGCCACACCCGCGGAGATCCAGGTCACGCTaGGATGGGTCCGCAGCACTCTGCGTACACACTCCCTCCACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGGPLQPHPRRSRSR*DGSAALCVHTPSTG Trigger: GCCTGTGGAGGGAGTGTGTACGCAGAGTGCTGCGGACCCATCGCAGCGTGACCTGGATCTCCGCGGGTGTGGCTGAAGCGGGCCACCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 |
||
| CDS CCA 90 bp | TGGCCCGCTTCAGCCACACCCGCGGAGATCCAGGTCACGCTGCGATaGGTCCGCAGCACTCTGCGTACACACTCCCTCCACAGGCGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: WPASATPAEIQVTLR*VRSTLRTHSLHRRH Trigger: ATGCCGCCTGTGGAGGGAGTGTGTACGCAGAGTGCTGCGGACCCATCGCAGCGTGACCTGGATCTCCGCGGGTGTGGCTGAAGCGGGCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 |
||
| CDS GCA 90 bp | CACCCGCGGAGATCCAGGTCACGCTGCGATGGGTCCGCAGCACTCTaGGTACACACTCCCTCCACAGGCGGCATACTCCGGCTACCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: HPRRSRSRCDGSAAL*VHTPSTGGILRLPE Trigger: TTCGGGTAGCCGGAGTATGCCGCCTGTGGAGGGAGTGTGTACGCAGAGTGCTGCGGACCCATCGCAGCGTGACCTGGATCTCCGCGGGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 |
||
| CDS GCA 90 bp | CTGCGTACACACTCCCTCCACAGGCGGCATACTTCAGCACGTAGGTaGTTCGCGGATCTGTGGAGGAGGAGACGCCGCCACCGCCGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LRTHSLHRRHTSARR*FADLWRRRRRHRRL Trigger: CAGGCGGCGGTGGCGGCGTCTCCTCCTCCACAGATCCGCGAAGCACCTACGTGCTGAAGTATGCCGCCTGTGGAGGGAGTGTGTACGCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153970.8 |
||
| CDS CCA 90 bp | TCAAGCGCCTCAGCTACCACGCGCACCAAGCAATGTCCCTCCAGGTaGCCCGCTTCAGCCACACCCGCGGAGATCCAGGTCACGCTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: SSASATTRTKQCPSR*PASATPAEIQVTLR Trigger: TCGCAGCGTGACCTGGATCTCCGCGGGTGTGGCTGAAGCGGGCCACCTGGAGGGACATTGCTTGGTGCGCGTGGTAGCTGAGGCGCTTGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 |
||
| CDS-3UTR CAA 90 bp | TTTAAACCTCCACCTTCCTGGTGGCCCTCAACCTCGCAGGGCGCTTATGCAGTGGGGATGTTGGCTGCTTaGAGGCGCTGCATAGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FKPPPSWWPSTSQGAYAVGMLAA*RRCIAA Trigger: GGCTGCTATGCAGCGCCTCAAAGCAGCCAACATCCC...CACTGCATAAGCGCCCTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTTAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR CAA 90 bp | TATTTAAACCTCCACCTTCCTGGTGGCCCTCAACCTCGCAGGGCGCTTATGCAGACCCGAAGCAGCGCTTaGGCCGGCAGGAAGGTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: YLNLHLPGGPQPRRALMQTRSSA*AGRKVN Trigger: GTTTACCTTCCTGCCGGCCAAAGCGCTGCTTCGGGT...CTGCATAAGCGCCCTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTTAAATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 |
||
| CDS-3UTR CAA 90 bp | TGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCACCACGCCTGGCAACACAATCCCAAGGACTaGGCACTGCTTGGGGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: CLCLPSAGIKGAHHHAWQHNPKD*ALLGEK Trigger: CTTTTCCCCAAGCAGTGCCAAGTCCTTGGGATTGTG...TTGCCAGGCGTGGTGATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 |
||
| CDS-3UTR CAA 90 bp | TGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCACCACGCCTGGCAAGCAGCCTCGACGGTCTaGGCATCATTTACATCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CLCLPSAGIKGAHHHAWQAASTV*ASFTSS Trigger: TGAGGATGTAAATGATGCCAAGACCGTCGAGGCTGC...TTGCCAGGCGTGGTGATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR CAA 90 bp | CATCAAGCACTATTTAAACCTCCACCTTCCTGGTGGCCCTCAACCTCGCAGGGCGGGATGTTGGCTGCTTaGAGGCGCTGCATAGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: HQALFKPPPSWWPSTSQGGMLAA*RRCIAA Trigger: GGCTGCTATGCAGCGCCTCAAAGCAGCCAACATCCC...GCCCTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTTAAATAGTGCTTGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR CAA 90 bp | CAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCAGGACTTGGCACTGCTaGGGGAAAAGCTTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QLRNLPASASRVLGLKVRRTWHC*GKSFSR Trigger: CCTGGAGAAGCTTTTCCCCAAGCAGTGCCAAGTCCT...GCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 |
||
| CDS-3UTR CAA 90 bp | ACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATAGGACTTGGCACTGCTaGGGGAAAAGCTTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TQKSACLCLPSAGIKGAHRTWHC*GKSFSR Trigger: CCTGGAGAAGCTTTTCCCCAAGCAGTGCCAAGTCCT...ATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCTGCTACCTGATCCCATaGGAGTCACCACAATTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LRNLPASASRVLGLKVRICYLIP*ESPQFP Trigger: CGGGAATTGTGGTGACTCCAATGGGATCAGGTAGCA...GATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCGTAAGTGAAGACAAATaGTCCACCTGGCCTCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: LRNLPASASRVLGLKVRIVSEDK*STWPPA Trigger: GGCTGGAGGCCAGGTGGACAATTTGTCTTCACTTAC...GATGCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
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| CDS-3UTR CAA 90 bp | GTGAGGAGAACTGTGGCACTCTGGATTCGGTGCCCACTAAATGACAGTCCAACCAGGACTTGGCACTGCTaGGGGAAAAGCTTCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: VRRTVALWIRCPLNDSPTRTWHC*GKSFSR Trigger: CCTGGAGAAGCTTTTCCCCAAGCAGTGCCAAGTCCT...GGTTGGACTGTCATTTAGTGGGCACCGAATCCAGAGTGCCACAGTTCTCCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140375.8 |
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| CDS-3UTR CAA 90 bp | TATTTAAACCTCCACCTTCCTGGTGGCCCTCAACCTCGCAGGGCGCTTATGCAGCACAATCCCAAGGACTaGGCACTGCTTGGGGAAAAG | + |
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Preference number: 5 (lower is better) Translates to: YLNLHLPGGPQPRRALMQHNPKD*ALLGEK Trigger: CTTTTCCCCAAGCAGTGCCAAGTCCTTGGGATTGTG...CTGCATAAGCGCCCTGCGAGGTTGAGGGCCACCAGGAAGGTGGAGGTTTAAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 ENSMUST00000146201.8 |
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| CDS-3UTR CAA 90 bp | TGCCTCCCGAGTGCTGGGATTAAAGGTGCGCATCACCACGCCTGGCAATTTTCTTGCTACCTGATCCCATaGGAGTCACCACAATTCCCG | + |
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Preference number: 5 (lower is better) Translates to: CLPSAGIKGAHHHAWQFSCYLIP*ESPQFP Trigger: CGGGAATTGTGGTGACTCCAATGGGATCAGGTAGCA...AGAAAATTGCCAGGCGTGGTGATGCGCACCTTTAATCCCAGCACTCGGGAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
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| CDS-3UTR CAA 90 bp | CAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGCGCACACGAAGTTCAGGGTaGTCCAGAAGACCTACTTCA | + |
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Preference number: 5 (lower is better) Translates to: QLRNLPASASRVLGLKVRTRSSG*SRRPTS Trigger: TGAAGTAGGTCTTCTGGACAACCCTGAACTTCGTGT...GCGCACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
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| CDS-3UTR CAA 90 bp | AAAGGTGCGCATCACCACGCCTGGCAATTTTCTCCTTTCTTAAGTCATGATTCTACCCGAAGCAGCGCTTaGGCCGGCAGGAAGGTAAAC | + |
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Preference number: 5 (lower is better) Translates to: KGAHHHAWQFSPFLSHDSTRSSA*AGRKVN Trigger: GTTTACCTTCCTGCCGGCCAAAGCGCTGCTTCGGGT...AGAATCATGACTTAAGAAAGGAGAAAATTGCCAGGCGTGGTGATGCGCACCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 |
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| CDS-3UTR CAA 90 bp | TGGCTCCCACCTTACAGCAGTTATAGCCAAAGACAAGGACCACACGAAGTTCAGCACAATCCCAAGGACTaGGCACTGCTTGGGGAAAAG | + |
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Preference number: 5 (lower is better) Translates to: WLPPYSSYSQRQGPHEVQHNPKD*ALLGEK Trigger: CTTTTCCCCAAGCAGTGCCAAGTCCTTGGGATTGTG...CTGAACTTCGTGTGGTCCTTGTCTTTGGCTATAACTGCTGTAAGGTGGGAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140375.8 |
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| CDS-3UTR CAA 90 bp | AAAGGTGCGCATCACCACGCCTGGCAATTTTCTCCTTTCTTAAGTCATGATTCTGTAAGTGAAGACAAATaGTCCACCTGGCCTCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: KGAHHHAWQFSPFLSHDSVSEDK*STWPPA Trigger: GGCTGGAGGCCAGGTGGACAATTTGTCTTCACTTAC...AGAATCATGACTTAAGAAAGGAGAAAATTGCCAGGCGTGGTGATGCGCACCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
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| CDS-3UTR CAA 90 bp | TGTGTGATAAAGGCTGTTCCCTTGCAGTCTCTTTACTATGAAGAGGAAAAAGCTTTCTGTTCAGGGATGTaGGCTGCTTTGAGGCGCTGC | + |
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Preference number: 5 (lower is better) Translates to: CVIKAVPLQSLYYEEEKAFCSGM*AALRRC Trigger: GCAGCGCCTCAAAGCAGCCAACATCCCTGAACAGAA...AGCTTTTTCCTCTTCATAGTAAAGAGACTGCAAGGGAACAGCCTTTATCACACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
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| CDS-3UTR CAA 90 bp | CCTCACTTCTTGACTTGTGTGCTTACAATGTTAATGCTGTCCTTCATCTATGTATTCTGTTCAGGGATGTaGGCTGCTTTGAGGCGCTGC | + |
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Preference number: 5 (lower is better) Translates to: PHFLTCVLTMLMLSFIYVFCSGM*AALRRC Trigger: GCAGCGCCTCAAAGCAGCCAACATCCCTGAACAGAA...TACATAGATGAAGGACAGCATTAACATTGTAAGCACACAAGTCAAGAAGTGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
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| CDS-3UTR CAA 90 bp | TCACTTCTTGACTTGTGTGCTTACAATGTTAATGCTGTCCTTCATCTATGTATTGCAGCCTCGACGGTCTaGGCATCATTTACATCCTCA | + |
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Preference number: 5 (lower is better) Translates to: SLLDLCAYNVNAVLHLCIAASTV*ASFTSS Trigger: TGAGGATGTAAATGATGCCAAGACCGTCGAGGCTGC...AATACATAGATGAAGGACAGCATTAACATTGTAAGCACACAAGTCAAGAAGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
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| CDS-3UTR CAA 90 bp | TCACTTCTTGACTTGTGTGCTTACAATGTTAATGCTGTCCTTCATCTATGTATTACACGAAGTTCAGGGTaGTCCAGAAGACCTACTTCA | + |
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Preference number: 5 (lower is better) Translates to: SLLDLCAYNVNAVLHLCITRSSG*SRRPTS Trigger: TGAAGTAGGTCTTCTGGACAACCCTGAACTTCGTGT...AATACATAGATGAAGGACAGCATTAACATTGTAAGCACACAAGTCAAGAAGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000146201.8 |
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| CDS CCA 72 bp | CGGCATACTTCAGCACGTAGGTGCTTCGCGGATCTGTaGAGGAGGAGACGCCGCCACCGCCGCCTGCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: RHTSARRCFADL*RRRRRHRRLPA Trigger: AGCCGGCAGGCGGCGGTGGCGGCGTCTCCTCCTCCACAGATCCGCGAAGCACCTACGTGCTGAAGTATGCCG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153970.8 |
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| CDS GCA 72 bp | CCGCTTCAGCCACACCCGCGGAGATCCAGGTCACGCTaGGATGGGTCCGCAGCACTCTGCGTACACACTCCC | + |
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Preference number: 6 (lower is better) Translates to: PLQPHPRRSRSR*DGSAALCVHTP Trigger: GGGAGTGTGTACGCAGAGTGCTGCGGACCCATCGCAGCGTGACCTGGATCTCCGCGGGTGTGGCTGAAGCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 |
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| CDS CCA 72 bp | CAAGGTTACTCAGCACGTAGGTGCTTCGCGGATCTGTaGAGGAGGAGACGCCGCCACCGCCGCCTGCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: QGYSARRCFADL*RRRRRHRRLPA Trigger: AGCCGGCAGGCGGCGGTGGCGGCGTCTCCTCCTCCACAGATCCGCGAAGCACCTACGTGCTGAGTAACCTTG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 |
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| CDS CCA 72 bp | TCAGCCACACCCGCGGAGATCCAGGTCACGCTGCGATaGGTCCGCAGCACTCTGCGTACACACTCCCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: SATPAEIQVTLR*VRSTLRTHSLH Trigger: GTGGAGGGAGTGTGTACGCAGAGTGCTGCGGACCCATCGCAGCGTGACCTGGATCTCCGCGGGTGTGGCTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 |
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| CDS CAA 90 bp | CACTCCCTCCACAGGCGGCATACTCCGGCTACCCGAAGCAGCGCTTaGGCCGGCAGGAAGGTAAACACACGCTCCACCACCTCCGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: HSLHRRHTPATRSSA*AGRKVNTRSTTSAR Trigger: CCTTGCGGAGGTGGTGGAGCGTGTGTTTACCTTCCTGCCGGCCAAAGCGCTGCTTCGGGTAGCCGGAGTATGCCGCCTGTGGAGGGAGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 |
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| CDS GCA 72 bp | AGATCCAGGTCACGCTGCGATGGGTCCGCAGCACTCTaGGTACACACTCCCTCCACAGGCGGCATACTCCGG | + |
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Preference number: 6 (lower is better) Translates to: RSRSRCDGSAAL*VHTPSTGGILR Trigger: CCGGAGTATGCCGCCTGTGGAGGGAGTGTGTACGCAGAGTGCTGCGGACCCATCGCAGCGTGACCTGGATCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 |
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| CDS CAA 72 bp | CACAGGCGGCATACTCCGGCTACCCGAAGCAGCGCTTaGGCCGGCAGGAAGGTAAACACACGCTCCACCACC | + |
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Preference number: 6 (lower is better) Translates to: HRRHTPATRSSA*AGRKVNTRSTT Trigger: GGTGGTGGAGCGTGTGTTTACCTTCCTGCCGGCCAAAGCGCTGCTTCGGGTAGCCGGAGTATGCCGCCTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034859.15 ENSMUST00000140375.8 |
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