Pregenerated sensors for FBXO21 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032898Ensembl transcript IDs: ENSMUST00000035579.10, ENSMUST00000201611.2, ENSMUST00000202447.4
Found 239 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | AGCGAGCGGTGTGGTGTGAGGATACACATGCGGCAGGCAGGCGGGTaGGCAAGGCTGGCAGGCGGCCCCCTAAAGCTCCGCTCACTACAG | + |
Preference number: 1 (lower is better) Translates to: SERCGVRIHMRQAGG*ARLAGGPLKLRSLQ Trigger: CTGTAGTGAGCGGAGCTTTAGGGGGCCGCCTGCCAGCCTTGCCCACCCGCCTGCCTGCCGCATGTGTATCCTCACACCACACCGCTCGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR TCA 90 bp | GAGGAGCGCACACCATCTAAAGTGGGGAGGCAGCCAGGCTGCTGGTaGAGTGGCTGTCCTGTGCTGACTCCAGGGGCAGCACACGTCCTT | + |
Preference number: 1 (lower is better) Translates to: EERTPSKVGRQPGCW*SGCPVLTPGAAHVL Trigger: AAGGACGTGTGCTGCCCCTGGAGTCAGCACAGGACAGCCACTTCACCAGCAGCCTGGCTGCCTCCCCACTTTAGATGGTGTGCGCTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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3UTR GCA 90 bp | CGAAGCAGAAACCCAGCAATGGAGACTCCCACCATGCTCCGAGGCTaGTTAGTACTGGGGTGCAAGGGTGTGAGTCCTCGTGGGGCGGGC | + |
Preference number: 1 (lower is better) Translates to: RSRNPAMETPTMLRG*LVLGCKGVSPRGAG Trigger: GCCCGCCCCACGAGGACTCACACCCTTGCACCCCAGTACTAAGCAGCCTCGGAGCATGGTGGGAGTCTCCATTGCTGGGTTTCTGCTTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR TCA 90 bp | GGGACAAGCACACGAGCCATGCCACGGGACACGGTGCCTTTCAACTaGTTCACTAGTGTAGCGGAGAGCAACGCTGTCTGTGGCTGGAGG | + |
Preference number: 1 (lower is better) Translates to: GTSTRAMPRDTVPFN*FTSVAESNAVCGWR Trigger: CCTCCAGCCACAGACAGCGTTGCTCTCCGCTACACTAGTGAATCAGTTGAAAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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3UTR TCA 90 bp | TGCTCCTCACTCACAGACAGCATCAGGCAGAAGCCAAGGGTGACCTaGGGCCAGACCTCATCCAAGAGTCAGCGTCCTGGAGCCTTCAGA | + |
Preference number: 1 (lower is better) Translates to: CSSLTDSIRQKPRVT*GQTSSKSQRPGAFR Trigger: TCTGAAGGCTCCAGGACGCTGACTCTTGGATGAGGTCTGGCCTCAGGTCACCCTTGGCTTCTGCCTGATGCTGTCTGTGAGTGAGGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR TCA 90 bp | TCCTGCCCTTCTAGTAACTGCCTCATCCCATCATCCTGGGGCTGGTaGAGGGCAATGGAAGAGGGAGCGCTCATTTGGAGCGAGCGGTGT | + |
Preference number: 1 (lower is better) Translates to: SCPSSNCLIPSSWGW*RAMEEGALIWSERC Trigger: ACACCGCTCGCTCCAAATGAGCGCTCCCTCTTCCATTGCCCTTCACCAGCCCCAGGATGATGGGATGAGGCAGTTACTAGAAGGGCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR GCA 90 bp | AGCGTCCTGGAGCCTTCAGACAGGCAGCTTGAAGCCCAGAGCATGTaGTCCGCTTCCCGTAAGCCCAACACTCTCAAAATGGAGGGTCTG | + |
Preference number: 1 (lower is better) Translates to: SVLEPSDRQLEAQSM*SASRKPNTLKMEGL Trigger: CAGACCCTCCATTTTGAGAGTGTTGGGCTTACGGGAAGCGGAGCACATGCTCTGGGCTTCAAGCTGCCTGTCTGAAGGCTCCAGGACGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR CCA 90 bp | GCGGCAGGCCTGACTCAGCGACCTTGTTCCAGAGATGAGGAAATATaGCCCCGACTGACTGTCCAGCGGGAGAGACTGACACAAGGTAGA | + |
Preference number: 1 (lower is better) Translates to: AAGLTQRPCSRDEEI*PRLTVQRERLTQGR Trigger: TCTACCTTGTGTCAGTCTCTCCCGCTGGACAGTCAGTCGGGGCCATATTTCCTCATCTCTGGAACAAGGTCGCTGAGTCAGGCCTGCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR TCA 90 bp | TTTCCAAATGTAAGTCTGGACCCGCCTCTGACTGGTTCTGCCTGGTaGGGCACAGGCTGGGCAGGAACCTTTTCAGCTGCAAGAGCTTCA | + |
Preference number: 1 (lower is better) Translates to: FPNVSLDPPLTGSAW*GTGWAGTFSAARAS Trigger: TGAAGCTCTTGCAGCTGAAAAGGTTCCTGCCCAGCCTGTGCCTCACCAGGCAGAACCAGTCAGAGGCGGGTCCAGACTTACATTTGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR CCA 90 bp | TGTGCTCCGCTTCCCGTAAGCCCAACACTCTCAAAATGGAGGGTCTaGATGTGTGACTCAGGAGTGACAGGGAACATGACACCTGTCTCC | + |
Preference number: 1 (lower is better) Translates to: CAPLPVSPTLSKWRV*MCDSGVTGNMTPVS Trigger: GGAGACAGGTGTCATGTTCCCTGTCACTCCTGAGTCACACATCCAGACCCTCCATTTTGAGAGTGTTGGGCTTACGGGAAGCGGAGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR CCA 90 bp | CCCAGAGCATGTGCTCCGCTTCCCGTAAGCCCAACACTCTCAAAATaGAGGGTCTGGATGTGTGACTCAGGAGTGACAGGGAACATGACA | + |
Preference number: 1 (lower is better) Translates to: PRACAPLPVSPTLSK*RVWMCDSGVTGNMT Trigger: TGTCATGTTCCCTGTCACTCCTGAGTCACACATCCAGACCCTCCATTTTGAGAGTGTTGGGCTTACGGGAAGCGGAGCACATGCTCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR TCA 90 bp | GCTTCCCGTAAGCCCAACACTCTCAAAATGGAGGGTCTGGATGTGTaGCTCAGGAGTGACAGGGAACATGACACCTGTCTCCCCTGGTTA | + |
Preference number: 1 (lower is better) Translates to: ASRKPNTLKMEGLDV*LRSDREHDTCLPWL Trigger: TAACCAGGGGAGACAGGTGTCATGTTCCCTGTCACTCCTGAGTCACACATCCAGACCCTCCATTTTGAGAGTGTTGGGCTTACGGGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR-3UTR TCA 90 bp | CAAGCACACGAGCCATGCCACGGGACACGGTGCCTTTCAACTGATTCACTAGTGGTGGCTGTCCTGTGCTaGCTCCAGGGGCAGCACACG | + |
Preference number: 2 (lower is better) Translates to: QAHEPCHGTRCLSTDSLVVAVLC*LQGQHT Trigger: CGTGTGCTGCCCCTGGAGTCAGCACAGGACAGCCAC...CACTAGTGAATCAGTTGAAAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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3UTR-3UTR TCA 90 bp | TGGGAAGGGGGTGAGAGGACAGAATGTCACACACTGTCACCACGGGACAAGCACCAGCCAGGCTGCTGGTaGAGTGGCTGTCCTGTGCTG | + |
Preference number: 2 (lower is better) Translates to: WEGGERTECHTLSPRDKHQPGCW*SGCPVL Trigger: CAGCACAGGACAGCCACTTCACCAGCAGCCTGGCTG...GTGCTTGTCCCGTGGTGACAGTGTGTGACATTCTGTCCTCTCACCCCCTTCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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3UTR-3UTR TCA 90 bp | TCTGGTAAAGGCTTGCTCCTCACTCACAGACAGCATCAGGCAGAAGCCAAGGGTGTGGCTGTCCTGTGCTaGCTCCAGGGGCAGCACACG | + |
Preference number: 2 (lower is better) Translates to: SGKGLLLTHRQHQAEAKGVAVLC*LQGQHT Trigger: CGTGTGCTGCCCCTGGAGTCAGCACAGGACAGCCAC...ACCCTTGGCTTCTGCCTGATGCTGTCTGTGAGTGAGGAGCAAGCCTTTACCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR-3UTR TCA 90 bp | CAAGCACACGAGCCATGCCACGGGACACGGTGCCTTTCAACTGATTCACTAGTGCAGCCAGGCTGCTGGTaGAGTGGCTGTCCTGTGCTG | + |
Preference number: 2 (lower is better) Translates to: QAHEPCHGTRCLSTDSLVQPGCW*SGCPVL Trigger: CAGCACAGGACAGCCACTTCACCAGCAGCCTGGCTG...CACTAGTGAATCAGTTGAAAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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3UTR-3UTR CCA 90 bp | AGAGATGAGGAAATATGGCCCCGACTGACTGTCCAGCGGGAGAGACTGACACAAGCACACCATCTAAAGTaGGGAGGCAGCCAGGCTGCT | + |
Preference number: 2 (lower is better) Translates to: RDEEIWPRLTVQRERLTQAHHLK*GGSQAA Trigger: AGCAGCCTGGCTGCCTCCCCACTTTAGATGGTGTGC...TTGTGTCAGTCTCTCCCGCTGGACAGTCAGTCGGGGCCATATTTCCTCATCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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3UTR-3UTR TCA 90 bp | GGTCAGGGAGGGAAGCCATCTTTCTCAGCTTTGACGTTTCTCTACAGGAAAAAGCAGCCAGGCTGCTGGTaGAGTGGCTGTCCTGTGCTG | + |
Preference number: 2 (lower is better) Translates to: GQGGKPSFSALTFLYRKKQPGCW*SGCPVL Trigger: CAGCACAGGACAGCCACTTCACCAGCAGCCTGGCTG...CTTTTTCCTGTAGAGAAACGTCAAAGCTGAGAAAGATGGCTTCCCTCCCTGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR-3UTR GCA 90 bp | GACCTCATCCAAGAGTCAGCGTCCTGGAGCCTTCAGACAGGCAGCTTGAAGCCCCAACAGGCAGAAATGTaGACAGACCCAGTGAGAGAA | + |
Preference number: 2 (lower is better) Translates to: DLIQESASWSLQTGSLKPQQAEM*TDPVRE Trigger: TTCTCTCACTGGGTCTGTGCACATTTCTGCCTGTTG...GGGCTTCAAGCTGCCTGTCTGAAGGCTCCAGGACGCTGACTCTTGGATGAGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR-3UTR CCA 90 bp | GGTCAGGGAGGGAAGCCATCTTTCTCAGCTTTGACGTTTCTCTACAGGAAAAAGGGACCCGCCTCTGACTaGTTCTGCCTGGTGAGGCAC | + |
Preference number: 2 (lower is better) Translates to: GQGGKPSFSALTFLYRKKGPASD*FCLVRH Trigger: GTGCCTCACCAGGCAGAACCAGTCAGAGGCGGGTCC...CTTTTTCCTGTAGAGAAACGTCAAAGCTGAGAAAGATGGCTTCCCTCCCTGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR-3UTR TCA 90 bp | CAAATACCAACTTACACGAGTGATATAGGCTCCCTCAGCCAAACGAAGCCTTCGATGGGACTGCTTGTCTaGGGACCAGGTAGCACCCAC | + |
Preference number: 2 (lower is better) Translates to: QIPTYTSDIGSLSQTKPSMGLLV*GPGSTH Trigger: GTGGGTGCTACCTGGTCCTCAGACAAGCAGTCCCAT...CGAAGGCTTCGTTTGGCTGAGGGAGCCTATATCACTCGTGTAAGTTGGTATTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR-3UTR CCA 90 bp | GGTCAGGGAGGGAAGCCATCTTTCTCAGCTTTGACGTTTCTCTACAGGAAAAAGGCACACCATCTAAAGTaGGGAGGCAGCCAGGCTGCT | + |
Preference number: 2 (lower is better) Translates to: GQGGKPSFSALTFLYRKKAHHLK*GGSQAA Trigger: AGCAGCCTGGCTGCCTCCCCACTTTAGATGGTGTGC...CTTTTTCCTGTAGAGAAACGTCAAAGCTGAGAAAGATGGCTTCCCTCCCTGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR-3UTR TCA 90 bp | GGTCAGGGAGGGAAGCCATCTTTCTCAGCTTTGACGTTTCTCTACAGGAAAAAGGAGGGTCTGGATGTGTaGCTCAGGAGTGACAGGGAA | + |
Preference number: 2 (lower is better) Translates to: GQGGKPSFSALTFLYRKKEGLDV*LRSDRE Trigger: TTCCCTGTCACTCCTGAGTCACACATCCAGACCCTC...CTTTTTCCTGTAGAGAAACGTCAAAGCTGAGAAAGATGGCTTCCCTCCCTGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR-3UTR GCA 90 bp | AAGAACAGACCCGTTCTCTTGGTTTGGGGACCAGGAGGTACAAGTTTTAAGAGCCCATTGCTGTGCATTTaGTCAGAGAACCAACGTAAC | + |
Preference number: 2 (lower is better) Translates to: KNRPVLLVWGPGGTSFKSPLLCI*SENQRN Trigger: GTTACGTTGGTTCTCTGAGCAAATGCACAGCAATGG...GCTCTTAAAACTTGTACCTCCTGGTCCCCAAACCAAGAGAACGGGTCTGTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR-3UTR GCA 90 bp | GGTCAGGGAGGGAAGCCATCTTTCTCAGCTTTGACGTTTCTCTACAGGAAAAAGGACCGACTTAAGATCTaGTCAGGATACTGGAGTAGA | + |
Preference number: 2 (lower is better) Translates to: GQGGKPSFSALTFLYRKKDRLKI*SGYWSR Trigger: TCTACTCCAGTATCCTGAGCAGATCTTAAGTCGGTC...CTTTTTCCTGTAGAGAAACGTCAAAGCTGAGAAAGATGGCTTCCCTCCCTGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR-3UTR TCA 90 bp | CAAATACCAACTTACACGAGTGATATAGGCTCCCTCAGCCAAACGAAGCCTTCGCATCTTTCTCAGCTTTaGCGTTTCTCTACAGGAAAA | + |
Preference number: 2 (lower is better) Translates to: QIPTYTSDIGSLSQTKPSHLSQL*RFSTGK Trigger: TTTTCCTGTAGAGAAACGTCAAAGCTGAGAAAGATG...CGAAGGCTTCGTTTGGCTGAGGGAGCCTATATCACTCGTGTAAGTTGGTATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR TCA 72 bp | GGCAGCCAGGCTGCTGGTGAAGTGGCTGTCCTGTGCTaGCTCCAGGGGCAGCACACGTCCTTCAGGAATCCT | + |
Preference number: 3 (lower is better) Translates to: GSQAAGEVAVLC*LQGQHTSFRNP Trigger: AGGATTCCTGAAGGACGTGTGCTGCCCCTGGAGTCAGCACAGGACAGCCACTTCACCAGCAGCCTGGCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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3UTR TCA 72 bp | GGCGGCAGGCCTGACTCAGCGACCTTGTTCCAGAGATaGGGAAATATGGCCCCGACTGACTGTCCAGCGGGA | + |
Preference number: 3 (lower is better) Translates to: GGRPDSATLFQR*GNMAPTDCPAG Trigger: TCCCGCTGGACAGTCAGTCGGGGCCATATTTCCTCATCTCTGGAACAAGGTCGCTGAGTCAGGCCTGCCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR CCA 72 bp | GCCTCATCCCATCATCCTGGGGCTGGTGAAGGGCAATaGAAGAGGGAGCGCTCATTTGGAGCGAGCGGTGTG | + |
Preference number: 3 (lower is better) Translates to: ASSHHPGAGEGQ*KRERSFGASGV Trigger: CACACCGCTCGCTCCAAATGAGCGCTCCCTCTTCCATTGCCCTTCACCAGCCCCAGGATGATGGGATGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR TCA 72 bp | GTAAGTCTGGACCCGCCTCTGACTGGTTCTGCCTGGTaGGGCACAGGCTGGGCAGGAACCTTTTCAGCTGCA | + |
Preference number: 3 (lower is better) Translates to: VSLDPPLTGSAW*GTGWAGTFSAA Trigger: TGCAGCTGAAAAGGTTCCTGCCCAGCCTGTGCCTCACCAGGCAGAACCAGTCAGAGGCGGGTCCAGACTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR CCA 72 bp | GACCTGAGGCCAGACCTCATCCAAGAGTCAGCGTCCTaGAGCCTTCAGACAGGCAGCTTGAAGCCCAGAGCA | + |
Preference number: 3 (lower is better) Translates to: DLRPDLIQESAS*SLQTGSLKPRA Trigger: TGCTCTGGGCTTCAAGCTGCCTGTCTGAAGGCTCCAGGACGCTGACTCTTGGATGAGGTCTGGCCTCAGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR TCA 72 bp | CTCACAGACAGCATCAGGCAGAAGCCAAGGGTGACCTaGGGCCAGACCTCATCCAAGAGTCAGCGTCCTGGA | + |
Preference number: 3 (lower is better) Translates to: LTDSIRQKPRVT*GQTSSKSQRPG Trigger: TCCAGGACGCTGACTCTTGGATGAGGTCTGGCCTCAGGTCACCCTTGGCTTCTGCCTGATGCTGTCTGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR GCA 72 bp | AACCCAGCAATGGAGACTCCCACCATGCTCCGAGGCTaGTTAGTACTGGGGTGCAAGGGTGTGAGTCCTCGT | + |
Preference number: 3 (lower is better) Translates to: NPAMETPTMLRG*LVLGCKGVSPR Trigger: ACGAGGACTCACACCCTTGCACCCCAGTACTAAGCAGCCTCGGAGCATGGTGGGAGTCTCCATTGCTGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR CCA 72 bp | TTCACTAGTGTAGCGGAGAGCAACGCTGTCTGTGGCTaGAGGAGCGCACACCATCTAAAGTGGGGAGGCAGC | + |
Preference number: 3 (lower is better) Translates to: FTSVAESNAVCG*RSAHHLKWGGS Trigger: GCTGCCTCCCCACTTTAGATGGTGTGCGCTCCTCCAGCCACAGACAGCGTTGCTCTCCGCTACACTAGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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3UTR GCA 72 bp | TCCAAATGTAAGTCTGGACCCGCCTCTGACTGGTTCTaGCTGGTGAGGCACAGGCTGGGCAGGAACCTTTTC | + |
Preference number: 3 (lower is better) Translates to: SKCKSGPASDWF*LVRHRLGRNLF Trigger: GAAAAGGTTCCTGCCCAGCCTGTGCCTCACCAGGCAGAACCAGTCAGAGGCGGGTCCAGACTTACATTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR TCA 72 bp | ACACGAGCCATGCCACGGGACACGGTGCCTTTCAACTaGTTCACTAGTGTAGCGGAGAGCAACGCTGTCTGT | + |
Preference number: 3 (lower is better) Translates to: TRAMPRDTVPFN*FTSVAESNAVC Trigger: ACAGACAGCGTTGCTCTCCGCTACACTAGTGAATCAGTTGAAAGGCACCGTGTCCCGTGGCATGGCTCGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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3UTR TCA 72 bp | TCTAGTAACTGCCTCATCCCATCATCCTGGGGCTGGTaGAGGGCAATGGAAGAGGGAGCGCTCATTTGGAGC | + |
Preference number: 3 (lower is better) Translates to: SSNCLIPSSWGW*RAMEEGALIWS Trigger: GCTCCAAATGAGCGCTCCCTCTTCCATTGCCCTTCACCAGCCCCAGGATGATGGGATGAGGCAGTTACTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR GCA 72 bp | TCACACACTGTCACCACGGGACAAGCACACGAGCCATaGCACGGGACACGGTGCCTTTCAACTGATTCACTA | + |
Preference number: 3 (lower is better) Translates to: SHTVTTGQAHEP*HGTRCLSTDSL Trigger: TAGTGAATCAGTTGAAAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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3UTR GCA 72 bp | GAGCCTTCAGACAGGCAGCTTGAAGCCCAGAGCATGTaGTCCGCTTCCCGTAAGCCCAACACTCTCAAAATG | + |
Preference number: 3 (lower is better) Translates to: EPSDRQLEAQSM*SASRKPNTLKM Trigger: CATTTTGAGAGTGTTGGGCTTACGGGAAGCGGAGCACATGCTCTGGGCTTCAAGCTGCCTGTCTGAAGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR CCA 72 bp | CTGACTCAGCGACCTTGTTCCAGAGATGAGGAAATATaGCCCCGACTGACTGTCCAGCGGGAGAGACTGACA | + |
Preference number: 3 (lower is better) Translates to: LTQRPCSRDEEI*PRLTVQRERLT Trigger: TGTCAGTCTCTCCCGCTGGACAGTCAGTCGGGGCCATATTTCCTCATCTCTGGAACAAGGTCGCTGAGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR GCA 72 bp | CTGGTGAGGCACAGGCTGGGCAGGAACCTTTTCAGCTaGAAGAGCTTCAAGCTTCCTGCCCTTCTAGTAACT | + |
Preference number: 3 (lower is better) Translates to: LVRHRLGRNLFS*KSFKLPALLVT Trigger: AGTTACTAGAAGGGCAGGAAGCTTGAAGCTCTTGCAGCTGAAAAGGTTCCTGCCCAGCCTGTGCCTCACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR TCA 72 bp | AAGTACAATCTAACGGAAGGCAGAGGGCGGCAGGCCTaGCTCAGCGACCTTGTTCCAGAGATGAGGAAATAT | + |
Preference number: 3 (lower is better) Translates to: KYNLTEGRGRQA*LSDLVPEMRKY Trigger: ATATTTCCTCATCTCTGGAACAAGGTCGCTGAGTCAGGCCTGCCGCCCTCTGCCTTCCGTTAGATTGTACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR TCA 72 bp | AAGCCCAACACTCTCAAAATGGAGGGTCTGGATGTGTaGCTCAGGAGTGACAGGGAACATGACACCTGTCTC | + |
Preference number: 3 (lower is better) Translates to: KPNTLKMEGLDV*LRSDREHDTCL Trigger: GAGACAGGTGTCATGTTCCCTGTCACTCCTGAGTCACACATCCAGACCCTCCATTTTGAGAGTGTTGGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR GCA 72 bp | CAGGAACCTTTTCAGCTGCAAGAGCTTCAAGCTTCCTaGCCTTCTAGTAACTGCCTCATCCCATCATCCTGG | + |
Preference number: 3 (lower is better) Translates to: QEPFQLQELQAS*PSSNCLIPSSW Trigger: CCAGGATGATGGGATGAGGCAGTTACTAGAAGGGCAGGAAGCTTGAAGCTCTTGCAGCTGAAAAGGTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR CCA 72 bp | CTTCCCGTAAGCCCAACACTCTCAAAATGGAGGGTCTaGATGTGTGACTCAGGAGTGACAGGGAACATGACA | + |
Preference number: 3 (lower is better) Translates to: LPVSPTLSKWRV*MCDSGVTGNMT Trigger: TGTCATGTTCCCTGTCACTCCTGAGTCACACATCCAGACCCTCCATTTTGAGAGTGTTGGGCTTACGGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR TCA 72 bp | TGTCTCCCCTGGTTAGGCTTCATCAGTTCATTTTCCTaGTCAGAAGAACAGACCCGTTCTCTTGGTTTGGGG | + |
Preference number: 3 (lower is better) Translates to: CLPWLGFISSFS*SEEQTRSLGLG Trigger: CCCCAAACCAAGAGAACGGGTCTGTTCTTCTGATCAGGAAAATGAACTGATGAAGCCTAACCAGGGGAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR CCA 72 bp | TTTCCTGATCAGAAGAACAGACCCGTTCTCTTGGTTTaGGGACCAGGAGGTACAAGTTTTAAGAGCCATTTT | + |
Preference number: 3 (lower is better) Translates to: FPDQKNRPVLLV*GPGGTSFKSHF Trigger: AAAATGGCTCTTAAAACTTGTACCTCCTGGTCCCCAAACCAAGAGAACGGGTCTGTTCTTCTGATCAGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR TCA 72 bp | AGTGATATAGGCTCCCTCAGCCAAACGAAGCCTTCGTaGAGAAACACATTTAAAAACAGTCTAAGTACATTA | + |
Preference number: 3 (lower is better) Translates to: SDIGSLSQTKPS*RNTFKNSLSTL Trigger: TAATGTACTTAGACTGTTTTTAAATGTGTTTCTTCACGAAGGCTTCGTTTGGCTGAGGGAGCCTATATCACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | CACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTGCCTTGGCGGCGGCAGGTGCTaGACACGCGGCCGATGTCCA | + |
Preference number: 4 (lower is better) Translates to: HTVTTGQAHEPCHGTRCLGGGRC*TRGRCP Trigger: TGGACATCGGCCGCGTGTCCAGCACCTGCCGCCGCC...AAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR TCA 90 bp | GGGCAGCACACGTCCTTCAGGAATCCTGGTCCCCTAGAAGGTAGCAGCAGCAGCAGGACTCACCTGCCCTaGAGGTCAGGCTGGGGTGGC | + |
Preference number: 4 (lower is better) Translates to: GQHTSFRNPGPLEGSSSSRTHLP*RSGWGG Trigger: GCCACCCCAGCCTGACCTTCAGGGCAGGTGAGTCCT...GCTGCTGCTGCTACCTTCTAGGGGACCAGGATTCCTGAAGGACGTGTGCTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR TCA 90 bp | CCTGTGCTGACTCCAGGGGCAGCACACGTCCTTCAGGAATCCTGGTCCCCTAGAAGGACTCACCTGCCCTaGAGGTCAGGCTGGGGTGGC | + |
Preference number: 4 (lower is better) Translates to: PVLTPGAAHVLQESWSPRRTHLP*RSGWGG Trigger: GCCACCCCAGCCTGACCTTCAGGGCAGGTGAGTCCT...TCTAGGGGACCAGGATTCCTGAAGGACGTGTGCTGCCCCTGGAGTCAGCACAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | CACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTGCCTTCACCTCACCCGGAACTaGTCCTTCCACACCTGCCCG | + |
Preference number: 4 (lower is better) Translates to: HTVTTGQAHEPCHGTRCLHLTRN*SFHTCP Trigger: CGGGCAGGTGTGGAAGGAGCAGTTCCGGGTGAGGTG...AAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | CTCCAGGGGCAGCACACGTCCTTCAGGAATCCTGGTCCCCTAGAAGGTAGCAGCCACCACGCCGTAGAGTaGTGCCGTCACGTGCTGGCC | + |
Preference number: 4 (lower is better) Translates to: LQGQHTSFRNPGPLEGSSHHAVE*CRHVLA Trigger: GGCCAGCACGTGACGGCAGCACTCTACGGCGTGGTG...GCTGCTACCTTCTAGGGGACCAGGATTCCTGAAGGACGTGTGCTGCCCCTGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | AGGGATGGGAAGGGGGTGAGAGGACAGAATGTCACACACTGTCACCACGGGACAGGCGGCGGCAGGTGCTaGACACGCGGCCGATGTCCA | + |
Preference number: 4 (lower is better) Translates to: RDGKGVRGQNVTHCHHGTGGGRC*TRGRCP Trigger: TGGACATCGGCCGCGTGTCCAGCACCTGCCGCCGCC...TGTCCCGTGGTGACAGTGTGTGACATTCTGTCCTCTCACCCCCTTCCCATCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | CACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTGCCTTAGCAGGAGCTGCACCTaGTCCGGGTACATCGCCAGG | + |
Preference number: 4 (lower is better) Translates to: HTVTTGQAHEPCHGTRCLSRSCT*SGYIAR Trigger: CCTGGCGATGTACCCGGACCAGGTGCAGCTCCTGCT...AAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR TCA 90 bp | CTCCAGGGGCAGCACACGTCCTTCAGGAATCCTGGTCCCCTAGAAGGTAGCAGCTGGGGTGGCGGCTGTTaGTGCCACGGAGGGTTTTGC | + |
Preference number: 4 (lower is better) Translates to: LQGQHTSFRNPGPLEGSSWGGGC*CHGGFC Trigger: GCAAAACCCTCCGTGGCATCAACAGCCGCCACCCCA...GCTGCTACCTTCTAGGGGACCAGGATTCCTGAAGGACGTGTGCTGCCCCTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR TCA 90 bp | CAGAATGTCACACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACAGGACTCACCTGCCCTaGAGGTCAGGCTGGGGTGGC | + |
Preference number: 4 (lower is better) Translates to: QNVTHCHHGTSTRAMPRDRTHLP*RSGWGG Trigger: GCCACCCCAGCCTGACCTTCAGGGCAGGTGAGTCCT...GTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTGTGACATTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR TCA 90 bp | CACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTGCCTTTCAGTGGCTTGGGAAGTTaGCAGGCTCCAGGGGAACCC | + |
Preference number: 4 (lower is better) Translates to: HCHHGTSTRAMPRDTVPFSGLGS*QAPGEP Trigger: GGGTTCCCCTGGAGCCTGTCAACTTCCCAAGCCACT...GAAAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | GTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTGCCTTTCAACTTGCTCCTTCCACACCTaGCCGCTGCTCTGGCACACC | + |
Preference number: 4 (lower is better) Translates to: VTTGQAHEPCHGTRCLSTCSFHT*PLLWHT Trigger: GGTGTGCCAGAGCAGCGGGCAGGTGTGGAAGGAGCA...AGTTGAAAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | AGGAGCGCACACCATCTAAAGTGGGGAGGCAGCCAGGCTGCTGGTGAAGTGGCTCACCTCACCCGGAACTaGTCCTTCCACACCTGCCCG | + |
Preference number: 4 (lower is better) Translates to: RSAHHLKWGGSQAAGEVAHLTRN*SFHTCP Trigger: CGGGCAGGTGTGGAAGGAGCAGTTCCGGGTGAGGTG...AGCCACTTCACCAGCAGCCTGGCTGCCTCCCCACTTTAGATGGTGTGCGCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | GGGCAGCACACGTCCTTCAGGAATCCTGGTCCCCTAGAAGGTAGCAGCAGCAGCGCCCCTTCTGCACCTTaGCACCACCGCAGCAGGAAG | + |
Preference number: 4 (lower is better) Translates to: GQHTSFRNPGPLEGSSSSAPSAP*HHRSRK Trigger: CTTCCTGCTGCGGTGGTGCCAAGGTGCAGAAGGGGC...GCTGCTGCTGCTACCTTCTAGGGGACCAGGATTCCTGAAGGACGTGTGCTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | AGGAGCGCACACCATCTAAAGTGGGGAGGCAGCCAGGCTGCTGGTGAAGTGGCTGCCCCTTCTGCACCTTaGCACCACCGCAGCAGGAAG | + |
Preference number: 4 (lower is better) Translates to: RSAHHLKWGGSQAAGEVAAPSAP*HHRSRK Trigger: CTTCCTGCTGCGGTGGTGCCAAGGTGCAGAAGGGGC...AGCCACTTCACCAGCAGCCTGGCTGCCTCCCCACTTTAGATGGTGTGCGCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | GTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTGCCTTTCAACTAGCAGGAGCTGCACCTaGTCCGGGTACATCGCCAGG | + |
Preference number: 4 (lower is better) Translates to: VTTGQAHEPCHGTRCLSTSRSCT*SGYIAR Trigger: CCTGGCGATGTACCCGGACCAGGTGCAGCTCCTGCT...AGTTGAAAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR TCA 90 bp | CAGAATGTCACACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACTGGGGTGGCGGCTGTTaGTGCCACGGAGGGTTTTGC | + |
Preference number: 4 (lower is better) Translates to: QNVTHCHHGTSTRAMPRDWGGGC*CHGGFC Trigger: GCAAAACCCTCCGTGGCATCAACAGCCGCCACCCCA...GTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTGTGACATTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR TCA 90 bp | TGTCACACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTAGTGGCTTGGGAAGTTaGCAGGCTCCAGGGGAACCC | + |
Preference number: 4 (lower is better) Translates to: CHTLSPRDKHTSHATGHGSGLGS*QAPGEP Trigger: GGGTTCCCCTGGAGCCTGTCAACTTCCCAAGCCACT...ACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTGTGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR TCA 90 bp | GCTGTCTGTGGCTGGAGGAGCGCACACCATCTAAAGTGGGGAGGCAGCCAGGCTGGTCCAAGGAGTCTCTaGGGAGCTGGTAGGACTGGT | + |
Preference number: 4 (lower is better) Translates to: AVCGWRSAHHLKWGGSQAGPRSL*GAGRTG Trigger: ACCAGTCCTACCAGCTCCTCAGAGACTCCTTGGACC...AGCCTGGCTGCCTCCCCACTTTAGATGGTGTGCGCTCCTCCAGCCACAGACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | CAGAATGTCACACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACAAGGTCAGGCTGGGGTaGCGGCTGTTGATGCCACGG | + |
Preference number: 4 (lower is better) Translates to: QNVTHCHHGTSTRAMPRDKVRLG*RLLMPR Trigger: CCGTGGCATCAACAGCCGCCACCCCAGCCTGACCTT...GTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTGTGACATTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | CACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTGCCTTTCCACCGCAGCAGGAAGTaGCTTGGGAAGTTGACAGGC | + |
Preference number: 4 (lower is better) Translates to: HCHHGTSTRAMPRDTVPFHRSRK*LGKLTG Trigger: GCCTGTCAACTTCCCAAGCCACTTCCTGCTGCGGTG...GAAAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | AGGAGCGCACACCATCTAAAGTGGGGAGGCAGCCAGGCTGCTGGTGAAGTGGCTTCCCCTTCTGCACCTTaGCACCACCGCAGCAGGAAG | + |
Preference number: 4 (lower is better) Translates to: RSAHHLKWGGSQAAGEVASPSAP*HHRSRK Trigger: CTTCCTGCTGCGGTGGTGCCAAGGTGCAGAAGGGGA...AGCCACTTCACCAGCAGCCTGGCTGCCTCCCCACTTTAGATGGTGTGCGCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201611.2 |
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CDS-3UTR TCA 90 bp | AATGTCACACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGAGTGGCTTGGGAAGTTaGCAGGCTCCAGGGGAACCC | + |
Preference number: 4 (lower is better) Translates to: NVTHCHHGTSTRAMPRDTSGLGS*QAPGEP Trigger: GGGTTCCCCTGGAGCCTGTCAACTTCCCAAGCCACT...CGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTGTGACATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR TCA 90 bp | GTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTGCCTTTCAACTGGTCCAAGGAGTCTCTaGGGAGCTGGTAGGACTGGT | + |
Preference number: 4 (lower is better) Translates to: VTTGQAHEPCHGTRCLSTGPRSL*GAGRTG Trigger: ACCAGTCCTACCAGCTCCTCAGAGACTCCTTGGACC...AGTTGAAAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | CCTGTGCTGACTCCAGGGGCAGCACACGTCCTTCAGGAATCCTGGTCCCCTAGACATAGAGGACTCACCTaGCCTGAAGGTCAGGCTGGG | + |
Preference number: 4 (lower is better) Translates to: PVLTPGAAHVLQESWSPRHRGLT*PEGQAG Trigger: CCCAGCCTGACCTTCAGGGCAGGTGAGTCCTCTATG...TCTAGGGGACCAGGATTCCTGAAGGACGTGTGCTGCCCCTGGAGTCAGCACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | CAAGCACACGAGCCATGCCACGGGACACGGTGCCTTTCAACTGATTCACTAGTGCACCACGCCGTAGAGTaGTGCCGTCACGTGCTGGCC | + |
Preference number: 4 (lower is better) Translates to: QAHEPCHGTRCLSTDSLVHHAVE*CRHVLA Trigger: GGCCAGCACGTGACGGCAGCACTCTACGGCGTGGTG...CACTAGTGAATCAGTTGAAAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | CCTGTGCTGACTCCAGGGGCAGCACACGTCCTTCAGGAATCCTGGTCCCCTAGAGGTAGGACTGGTCAATaGCTTCCCTCTTGCCCAGGC | + |
Preference number: 4 (lower is better) Translates to: PVLTPGAAHVLQESWSPRGRTGQ*LPSCPG Trigger: GCCTGGGCAAGAGGGAAGGCATTGACCAGTCCTACC...TCTAGGGGACCAGGATTCCTGAAGGACGTGTGCTGCCCCTGGAGTCAGCACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | CAGAATGTCACACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACTGGAGGAGCAGGAGCTaGACCTGGTCCGGGTACATC | + |
Preference number: 4 (lower is better) Translates to: QNVTHCHHGTSTRAMPRDWRSRS*TWSGYI Trigger: GATGTACCCGGACCAGGTGCAGCTCCTGCTCCTCCA...GTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTGTGACATTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | GGGAAGGGGGTGAGAGGACAGAATGTCACACACTGTCACCACGGGACAAGCACAAAGGTCAGGCTGGGGTaGCGGCTGTTGATGCCACGG | + |
Preference number: 4 (lower is better) Translates to: GKGVRGQNVTHCHHGTSTKVRLG*RLLMPR Trigger: CCGTGGCATCAACAGCCGCCACCCCAGCCTGACCTT...TGTGCTTGTCCCGTGGTGACAGTGTGTGACATTCTGTCCTCTCACCCCCTTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | CACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTGCCTTTCGTCAAGCACCTTCTCTaGCCAGATGCCCAGGTGGAA | + |
Preference number: 4 (lower is better) Translates to: HCHHGTSTRAMPRDTVPFVKHLL*PDAQVE Trigger: TTCCACCTGGGCATCTGGCCAGAGAAGGTGCTTGAC...GAAAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 |
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3UTR CAA 72 bp | GGGCTGGTGAAGGGCAATGGAAGAGGGAGCGCTCATTaGGAGCGAGCGGTGTGGTGTGAGGATACACATGCG | + |
Preference number: 4 (lower is better) Translates to: GLVKGNGRGSAH*ERAVWCEDTHA Trigger: CGCATGTGTATCCTCACACCACACCGCTCGCTCCAAATGAGCGCTCCCTCTTCCATTGCCCTTCACCAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | CAAGCACACGAGCCATGCCACGGGACACGGTGCCTTTCAACTGATTCACTAGTGTGCTCCTTCCACACCTaGCCGCTGCTCTGGCACACC | + |
Preference number: 4 (lower is better) Translates to: QAHEPCHGTRCLSTDSLVCSFHT*PLLWHT Trigger: GGTGTGCCAGAGCAGCGGGCAGGTGTGGAAGGAGCA...CACTAGTGAATCAGTTGAAAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | CACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTGCCTTTGCCACGGAGGGTTTTaGACACAAGCTCCACAATGC | + |
Preference number: 4 (lower is better) Translates to: HTVTTGQAHEPCHGTRCLCHGGF*TQAPQC Trigger: GCATTGTGGAGCTTGTGTGCAAAACCCTCCGTGGCA...AAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | CCTGTGCTGACTCCAGGGGCAGCACACGTCCTTCAGGAATCCTGGTCCCCTAGATGGGGATTCCTGTTCTaGGGGTCAACACCTGGTGCA | + |
Preference number: 4 (lower is better) Translates to: PVLTPGAAHVLQESWSPRWGFLF*GSTPGA Trigger: TGCACCAGGTGTTGACCCGCAGAACAGGAATCCCCA...TCTAGGGGACCAGGATTCCTGAAGGACGTGTGCTGCCCCTGGAGTCAGCACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | TGGGAAGGGGGTGAGAGGACAGAATGTCACACACTGTCACCACGGGACAAGCACTGGAGGAGCAGGAGCTaGACCTGGTCCGGGTACATC | + |
Preference number: 4 (lower is better) Translates to: WEGGERTECHTLSPRDKHWRSRS*TWSGYI Trigger: GATGTACCCGGACCAGGTGCAGCTCCTGCTCCTCCA...GTGCTTGTCCCGTGGTGACAGTGTGTGACATTCTGTCCTCTCACCCCCTTCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | GGGAAGGGGGTGAGAGGACAGAATGTCACACACTGTCACCACGGGACAAGCACATGGAGGAGCAGGAGCTaGACCTGGTCCGGGTACATC | + |
Preference number: 4 (lower is better) Translates to: GKGVRGQNVTHCHHGTSTWRSRS*TWSGYI Trigger: GATGTACCCGGACCAGGTGCAGCTCCTGCTCCTCCA...TGTGCTTGTCCCGTGGTGACAGTGTGTGACATTCTGTCCTCTCACCCCCTTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | GTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTGCCTTTCAACTCCTTCTCTGGCCAGATaGCCAGGTGGAAGTAGAGTC | + |
Preference number: 4 (lower is better) Translates to: VTTGQAHEPCHGTRCLSTPSLAR*PGGSRV Trigger: GACTCTACTTCCACCTGGGCATCTGGCCAGAGAAGG...AGTTGAAAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 |
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CDS-3UTR GCA 90 bp | CACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTGCCTTGGTAGGACTGGTCAATaGCTTCCCCTTCTGCACCTT | + |
Preference number: 4 (lower is better) Translates to: HTVTTGQAHEPCHGTRCLGRTGQ*LPLLHL Trigger: AAGGTGCAGAAGGGGAAGGCATTGACCAGTCCTACC...AAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201611.2 |
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CDS-3UTR CCA 90 bp | GCTGTCTGTGGCTGGAGGAGCGCACACCATCTAAAGTGGGGAGGCAGCCAGGCTGCTGATGTCGGAGAGTaGGTTGCAGTACTGGTCGAT | + |
Preference number: 4 (lower is better) Translates to: AVCGWRSAHHLKWGGSQAADVGE*VAVLVD Trigger: ATCGACCAGTACTGCAACCCACTCTCCGACATCAGC...AGCCTGGCTGCCTCCCCACTTTAGATGGTGTGCGCTCCTCCAGCCACAGACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | CCTGTGCTGACTCCAGGGGCAGCACACGTCCTTCAGGAATCCTGGTCCCCTAGACAGCAGGAAGTGGCTTaGGAAGTTGACAGGCTCCAG | + |
Preference number: 4 (lower is better) Translates to: PVLTPGAAHVLQESWSPRQQEVA*EVDRLQ Trigger: CTGGAGCCTGTCAACTTCCCAAGCCACTTCCTGCTG...TCTAGGGGACCAGGATTCCTGAAGGACGTGTGCTGCCCCTGGAGTCAGCACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | AGGAGCGCACACCATCTAAAGTGGGGAGGCAGCCAGGCTGCTGGTGAAGTGGCTGGTGGAAGTAGAGTCTaGCTTGGAGGAGCAGGAGCT | + |
Preference number: 4 (lower is better) Translates to: RSAHHLKWGGSQAAGEVAGGSRV*LGGAGA Trigger: AGCTCCTGCTCCTCCAAGCCAGACTCTACTTCCACC...AGCCACTTCACCAGCAGCCTGGCTGCCTCCCCACTTTAGATGGTGTGCGCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | CCTGTGCTGACTCCAGGGGCAGCACACGTCCTTCAGGAATCCTGGTCCCCTAGAGGTGGAAGTAGAGTCTaGCTTGGAGGAGCAGGAGCT | + |
Preference number: 4 (lower is better) Translates to: PVLTPGAAHVLQESWSPRGGSRV*LGGAGA Trigger: AGCTCCTGCTCCTCCAAGCCAGACTCTACTTCCACC...TCTAGGGGACCAGGATTCCTGAAGGACGTGTGCTGCCCCTGGAGTCAGCACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | TGTCACACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTGTCAAGCACCTTCTCTaGCCAGATGCCCAGGTGGAA | + |
Preference number: 4 (lower is better) Translates to: CHTLSPRDKHTSHATGHGVKHLL*PDAQVE Trigger: TTCCACCTGGGCATCTGGCCAGAGAAGGTGCTTGAC...ACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTGTGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 |
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CDS-3UTR TCA 90 bp | CAGAATGTCACACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACGGGTGCGAGATTTCCTaGGGCTCCACGTTGTATTCC | + |
Preference number: 4 (lower is better) Translates to: QNVTHCHHGTSTRAMPRDGCEIS*GSTLYS Trigger: GGAATACAACGTGGAGCCTCAGGAAATCTCGCACCC...GTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTGTGACATTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | CACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTGCCTTCCATTACAGGGGACGTaGTCTGAAAAGAACCGCTTG | + |
Preference number: 4 (lower is better) Translates to: HTVTTGQAHEPCHGTRCLPLQGT*SEKNRL Trigger: CAAGCGGTTCTTTTCAGAGCACGTCCCCTGTAATGG...AAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | TGGGAAGGGGGTGAGAGGACAGAATGTCACACACTGTCACCACGGGACAAGCACCATAGAGGACTCACCTaGCCTGAAGGTCAGGCTGGG | + |
Preference number: 4 (lower is better) Translates to: WEGGERTECHTLSPRDKHHRGLT*PEGQAG Trigger: CCCAGCCTGACCTTCAGGGCAGGTGAGTCCTCTATG...GTGCTTGTCCCGTGGTGACAGTGTGTGACATTCTGTCCTCTCACCCCCTTCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | TGTCCTGTGCTGACTCCAGGGGCAGCACACGTCCTTCAGGAATCCTGGTCCCCTTTTCGGATCCACTCATaGCCCATCATGCACGTAGGG | + |
Preference number: 4 (lower is better) Translates to: CPVLTPGAAHVLQESWSPFRIHS*PIMHVG Trigger: CCCTACGTGCATGATGGGGCATGAGTGGATCCGAAA...AGGGGACCAGGATTCCTGAAGGACGTGTGCTGCCCCTGGAGTCAGCACAGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | AGAGATGAGGAAATATGGCCCCGACTGACTGTCCAGCGGGAGAGACTGACACAAAAGGTCAGGCTGGGGTaGCGGCTGTTGATGCCACGG | + |
Preference number: 4 (lower is better) Translates to: RDEEIWPRLTVQRERLTQKVRLG*RLLMPR Trigger: CCGTGGCATCAACAGCCGCCACCCCAGCCTGACCTT...TTGTGTCAGTCTCTCCCGCTGGACAGTCAGTCGGGGCCATATTTCCTCATCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | CCCACCTCCATGCCCTTCTCCAAGTACAATCTAACGGAAGGCAGAGGGCGGCAGCAGCAGGAAGTGGCTTaGGAAGTTGACAGGCTCCAG | + |
Preference number: 4 (lower is better) Translates to: PTSMPFSKYNLTEGRGRQQQEVA*EVDRLQ Trigger: CTGGAGCCTGTCAACTTCCCAAGCCACTTCCTGCTG...CTGCCGCCCTCTGCCTTCCGTTAGATTGTACTTGGAGAAGGGCATGGAGGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR TCA 90 bp | TGTCCTGTGCTGACTCCAGGGGCAGCACACGTCCTTCAGGAATCCTGGTCCCCTATTCCTCTAACCAATTaGCGTAGTCGGTGGGGCTGT | + |
Preference number: 4 (lower is better) Translates to: CPVLTPGAAHVLQESWSPIPLTN*RSRWGC Trigger: ACAGCCCCACCGACTACGTCAATTGGTTAGAGGAAT...AGGGGACCAGGATTCCTGAAGGACGTGTGCTGCCCCTGGAGTCAGCACAGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR TCA 90 bp | TGTCACACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTATTCCTCTAACCAATTaGCGTAGTCGGTGGGGCTGT | + |
Preference number: 4 (lower is better) Translates to: CHTLSPRDKHTSHATGHGIPLTN*RSRWGC Trigger: ACAGCCCCACCGACTACGTCAATTGGTTAGAGGAAT...ACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTGTGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR TCA 90 bp | AGGGTCTGGATGTGTGACTCAGGAGTGACAGGGAACATGACACCTGTCTCCCCTGGTCCAAGGAGTCTCTaGGGAGCTGGTAGGACTGGT | + |
Preference number: 4 (lower is better) Translates to: RVWMCDSGVTGNMTPVSPGPRSL*GAGRTG Trigger: ACCAGTCCTACCAGCTCCTCAGAGACTCCTTGGACC...AGGGGAGACAGGTGTCATGTTCCCTGTCACTCCTGAGTCACACATCCAGACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR TCA 90 bp | TGGGAAGGGGGTGAGAGGACAGAATGTCACACACTGTCACCACGGGACAAGCACGGGTGCGAGATTTCCTaGGGCTCCACGTTGTATTCC | + |
Preference number: 4 (lower is better) Translates to: WEGGERTECHTLSPRDKHGCEIS*GSTLYS Trigger: GGAATACAACGTGGAGCCTCAGGAAATCTCGCACCC...GTGCTTGTCCCGTGGTGACAGTGTGTGACATTCTGTCCTCTCACCCCCTTCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | CTCCAGGGGCAGCACACGTCCTTCAGGAATCCTGGTCCCCTAGAAGGTAGCAGCCCATTACAGGGGACGTaGTCTGAAAAGAACCGCTTG | + |
Preference number: 4 (lower is better) Translates to: LQGQHTSFRNPGPLEGSSPLQGT*SEKNRL Trigger: CAAGCGGTTCTTTTCAGAGCACGTCCCCTGTAATGG...GCTGCTACCTTCTAGGGGACCAGGATTCCTGAAGGACGTGTGCTGCCCCTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | TGGCCCCGACTGACTGTCCAGCGGGAGAGACTGACACAAGGTAGATGGAGACAGTGCCACGGAGGGTTTTaGACACAAGCTCCACAATGC | + |
Preference number: 4 (lower is better) Translates to: WPRLTVQRERLTQGRWRQCHGGF*TQAPQC Trigger: GCATTGTGGAGCTTGTGTGCAAAACCCTCCGTGGCA...CTGTCTCCATCTACCTTGTGTCAGTCTCTCCCGCTGGACAGTCAGTCGGGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | TGGCCCCGACTGACTGTCCAGCGGGAGAGACTGACACAAGGTAGATGGAGACAGAAAGATGTCCAGGGTTaGCCCTTCTGCACCTTGGCA | + |
Preference number: 4 (lower is better) Translates to: WPRLTVQRERLTQGRWRQKDVQG*PFCTLA Trigger: TGCCAAGGTGCAGAAGGGGCAACCCTGGACATCTTT...CTGTCTCCATCTACCTTGTGTCAGTCTCTCCCGCTGGACAGTCAGTCGGGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | CACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTGCCTTTCACTGTCAGCTGCTTaGCCTTCCCAAAAGCATCTA | + |
Preference number: 4 (lower is better) Translates to: HTVTTGQAHEPCHGTRCLSLSAA*PSQKHL Trigger: TAGATGCTTTTGGGAAGGGCAAGCAGCTGACAGTGA...AAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | TGGGAAGGGGGTGAGAGGACAGAATGTCACACACTGTCACCACGGGACAAGCACCAATGCCTTCCCTCTTaGCCAGGCTCAGCAAGTTGC | + |
Preference number: 4 (lower is better) Translates to: WEGGERTECHTLSPRDKHQCLPS*PGSASC Trigger: GCAACTTGCTGAGCCTGGGCAAGAGGGAAGGCATTG...GTGCTTGTCCCGTGGTGACAGTGTGTGACATTCTGTCCTCTCACCCCCTTCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | AGAATGTCACACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACCTTCTCTGGCCAGATaGCCAGGTGGAAGTAGAGTC | + |
Preference number: 4 (lower is better) Translates to: RMSHTVTTGQAHEPCHGTPSLAR*PGGSRV Trigger: GACTCTACTTCCACCTGGGCATCTGGCCAGAGAAGG...TGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTGTGACATTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 |
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CDS-3UTR GCA 90 bp | CCCACCTCCATGCCCTTCTCCAAGTACAATCTAACGGAAGGCAGAGGGCGGCAGTTTCGGATCCACTCATaGCCCATCATGCACGTAGGG | + |
Preference number: 4 (lower is better) Translates to: PTSMPFSKYNLTEGRGRQFRIHS*PIMHVG Trigger: CCCTACGTGCATGATGGGGCATGAGTGGATCCGAAA...CTGCCGCCCTCTGCCTTCCGTTAGATTGTACTTGGAGAAGGGCATGGAGGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | GACCTCATCCAAGAGTCAGCGTCCTGGAGCCTTCAGACAGGCAGCTTGAAGCCCGCTGATGTCGGAGAGTaGGTTGCAGTACTGGTCGAT | + |
Preference number: 4 (lower is better) Translates to: DLIQESASWSLQTGSLKPADVGE*VAVLVD Trigger: ATCGACCAGTACTGCAACCCACTCTCCGACATCAGC...GGGCTTCAAGCTGCCTGTCTGAAGGCTCCAGGACGCTGACTCTTGGATGAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | GGGCAGCACACGTCCTTCAGGAATCCTGGTCCCCTAGAAGGTAGCAGCAGCAGCCTCCAGCTCTGCATTTaGGATGTAGTGTGTGCCTGT | + |
Preference number: 4 (lower is better) Translates to: GQHTSFRNPGPLEGSSSSLQLCI*DVVCAC Trigger: ACAGGCACACACTACATCCCAAATGCAGAGCTGGAG...GCTGCTGCTGCTACCTTCTAGGGGACCAGGATTCCTGAAGGACGTGTGCTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR TCA 90 bp | GGGAAGGGGGTGAGAGGACAGAATGTCACACACTGTCACCACGGGACAAGCACAAGAGCAGAGACATGCTaGTGGGGATTCCTGTTCTGC | + |
Preference number: 4 (lower is better) Translates to: GKGVRGQNVTHCHHGTSTRAETC*WGFLFC Trigger: GCAGAACAGGAATCCCCATCAGCATGTCTCTGCTCT...TGTGCTTGTCCCGTGGTGACAGTGTGTGACATTCTGTCCTCTCACCCCCTTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | GGGAAGGGGGTGAGAGGACAGAATGTCACACACTGTCACCACGGGACAAGCACAAAAGATGTCCAGGGTTaGCCCTTCTGCACCTTGGCA | + |
Preference number: 4 (lower is better) Translates to: GKGVRGQNVTHCHHGTSTKDVQG*PFCTLA Trigger: TGCCAAGGTGCAGAAGGGGCAACCCTGGACATCTTT...TGTGCTTGTCCCGTGGTGACAGTGTGTGACATTCTGTCCTCTCACCCCCTTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | TGTCCTGTGCTGACTCCAGGGGCAGCACACGTCCTTCAGGAATCCTGGTCCCCTTCACTGTCAGCTGCTTaGCCTTCCCAAAAGCATCTA | + |
Preference number: 4 (lower is better) Translates to: CPVLTPGAAHVLQESWSPSLSAA*PSQKHL Trigger: TAGATGCTTTTGGGAAGGGCAAGCAGCTGACAGTGA...AGGGGACCAGGATTCCTGAAGGACGTGTGCTGCCCCTGGAGTCAGCACAGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | AGGGATGGGAAGGGGGTGAGAGGACAGAATGTCACACACTGTCACCACGGGACATTTCGGATCCACTCATaGCCCATCATGCACGTAGGG | + |
Preference number: 4 (lower is better) Translates to: RDGKGVRGQNVTHCHHGTFRIHS*PIMHVG Trigger: CCCTACGTGCATGATGGGGCATGAGTGGATCCGAAA...TGTCCCGTGGTGACAGTGTGTGACATTCTGTCCTCTCACCCCCTTCCCATCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | AGGGATGGGAAGGGGGTGAGAGGACAGAATGTCACACACTGTCACCACGGGACAACTTCTCTGGCCAGATaGCCAGGTGGAAGTAGAGTC | + |
Preference number: 4 (lower is better) Translates to: RDGKGVRGQNVTHCHHGTTSLAR*PGGSRV Trigger: GACTCTACTTCCACCTGGGCATCTGGCCAGAGAAGT...TGTCCCGTGGTGACAGTGTGTGACATTCTGTCCTCTCACCCCCTTCCCATCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | CAAGCACACGAGCCATGCCACGGGACACGGTGCCTTTCAACTGATTCACTAGTGCAGCAGGAAGTGGCTTaGGAAGTTGACAGGCTCCAG | + |
Preference number: 4 (lower is better) Translates to: QAHEPCHGTRCLSTDSLVQQEVA*EVDRLQ Trigger: CTGGAGCCTGTCAACTTCCCAAGCCACTTCCTGCTG...CACTAGTGAATCAGTTGAAAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | TGGCCCCGACTGACTGTCCAGCGGGAGAGACTGACACAAGGTAGATGGAGACAGTCATCACAAGCCCGATaGAGTAGCAGACATCCCTGT | + |
Preference number: 4 (lower is better) Translates to: WPRLTVQRERLTQGRWRQSSQAR*SSRHPC Trigger: ACAGGGATGTCTGCTACTCCATCGGGCTTGTGATGA...CTGTCTCCATCTACCTTGTGTCAGTCTCTCCCGCTGGACAGTCAGTCGGGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR TCA 90 bp | AGAATGTCACACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACAATTCCTCTAACCAATTaGCGTAGTCGGTGGGGCTGT | + |
Preference number: 4 (lower is better) Translates to: RMSHTVTTGQAHEPCHGTIPLTN*RSRWGC Trigger: ACAGCCCCACCGACTACGTCAATTGGTTAGAGGAAT...TGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTGTGACATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR TCA 90 bp | CAGAATGTCACACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACGGTTTTCAATGTCACTaGAGCCATTACAGGGGACGT | + |
Preference number: 4 (lower is better) Translates to: QNVTHCHHGTSTRAMPRDGFQCH*SHYRGR Trigger: ACGTCCCCTGTAATGGCTTCAGTGACATTGAAAACC...GTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTGTGACATTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR TCA 90 bp | AATGTCACACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGGTTTTCAATGTCACTaGAGCCATTACAGGGGACGT | + |
Preference number: 4 (lower is better) Translates to: NVTHCHHGTSTRAMPRDTGFQCH*SHYRGR Trigger: ACGTCCCCTGTAATGGCTTCAGTGACATTGAAAACC...CGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTGTGACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR TCA 90 bp | AAGAACAGACCCGTTCTCTTGGTTTGGGGACCAGGAGGTACAAGTTTTAAGAGCTGGGGTGGCGGCTGTTaGTGCCACGGAGGGTTTTGC | + |
Preference number: 4 (lower is better) Translates to: KNRPVLLVWGPGGTSFKSWGGGC*CHGGFC Trigger: GCAAAACCCTCCGTGGCATCAACAGCCGCCACCCCA...GCTCTTAAAACTTGTACCTCCTGGTCCCCAAACCAAGAGAACGGGTCTGTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | AAGAACAGACCCGTTCTCTTGGTTTGGGGACCAGGAGGTACAAGTTTTAAGAGCCACCTCACCCGGAACTaGTCCTTCCACACCTGCCCG | + |
Preference number: 4 (lower is better) Translates to: KNRPVLLVWGPGGTSFKSHLTRN*SFHTCP Trigger: CGGGCAGGTGTGGAAGGAGCAGTTCCGGGTGAGGTG...GCTCTTAAAACTTGTACCTCCTGGTCCCCAAACCAAGAGAACGGGTCTGTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | CAAGCACACGAGCCATGCCACGGGACACGGTGCCTTTCAACTGATTCACTAGTGCTGTGGATCTGGGCCTaGATGTCTCTGAAGCTGATG | + |
Preference number: 4 (lower is better) Translates to: QAHEPCHGTRCLSTDSLVLWIWA*MSLKLM Trigger: CATCAGCTTCAGAGACATCCAGGCCCAGATCCACAG...CACTAGTGAATCAGTTGAAAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | AGAGATGAGGAAATATGGCCCCGACTGACTGTCCAGCGGGAGAGACTGACACAAGGTGGAAGTAGAGTCTaGCTTGGAGGAGCAGGAGCT | + |
Preference number: 4 (lower is better) Translates to: RDEEIWPRLTVQRERLTQGGSRV*LGGAGA Trigger: AGCTCCTGCTCCTCCAAGCCAGACTCTACTTCCACC...TTGTGTCAGTCTCTCCCGCTGGACAGTCAGTCGGGGCCATATTTCCTCATCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | AGGGATGGGAAGGGGGTGAGAGGACAGAATGTCACACACTGTCACCACGGGACACTCCAGCTCTGCATTTaGGATGTAGTGTGTGCCTGT | + |
Preference number: 4 (lower is better) Translates to: RDGKGVRGQNVTHCHHGTLQLCI*DVVCAC Trigger: ACAGGCACACACTACATCCCAAATGCAGAGCTGGAG...TGTCCCGTGGTGACAGTGTGTGACATTCTGTCCTCTCACCCCCTTCCCATCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | TGGGAAGGGGGTGAGAGGACAGAATGTCACACACTGTCACCACGGGACAAGCACCTCCAGCTCTGCATTTaGGATGTAGTGTGTGCCTGT | + |
Preference number: 4 (lower is better) Translates to: WEGGERTECHTLSPRDKHLQLCI*DVVCAC Trigger: ACAGGCACACACTACATCCCAAATGCAGAGCTGGAG...GTGCTTGTCCCGTGGTGACAGTGTGTGACATTCTGTCCTCTCACCCCCTTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | GCTGTCTGTGGCTGGAGGAGCGCACACCATCTAAAGTGGGGAGGCAGCCAGGCTTCTAACCCAGCTTTCTaGCGAACTTTATATTCCTCT | + |
Preference number: 4 (lower is better) Translates to: AVCGWRSAHHLKWGGSQASNPAF*RTLYSS Trigger: AGAGGAATATAAAGTTCGGCAGAAAGCTGGGTTAGA...AGCCTGGCTGCCTCCCCACTTTAGATGGTGTGCGCTCCTCCAGCCACAGACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | CACAGGACAGATGTGCCATTGGCCCAGTGGGTAGTTTTACTTATGGGACTGCTTGGTAGGACTGGTCAATaGCTTCCCTCTTGCCCAGGC | + |
Preference number: 4 (lower is better) Translates to: HRTDVPLAQWVVLLMGLLGRTGQ*LPSCPG Trigger: GCCTGGGCAAGAGGGAAGGCATTGACCAGTCCTACC...AAGCAGTCCCATAAGTAAAACTACCCACTGGGCCAATGGCACATCTGTCCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | CCCACCTCCATGCCCTTCTCCAAGTACAATCTAACGGAAGGCAGAGGGCGGCAGGGCTGTGTCCTCCTTTaGACTGTAAATATTCTGCAC | + |
Preference number: 4 (lower is better) Translates to: PTSMPFSKYNLTEGRGRQGCVLL*TVNILH Trigger: GTGCAGAATATTTACAGTGCAAAGGAGGACACAGCC...CTGCCGCCCTCTGCCTTCCGTTAGATTGTACTTGGAGAAGGGCATGGAGGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | AGAGATGAGGAAATATGGCCCCGACTGACTGTCCAGCGGGAGAGACTGACACAAGCTGATGTCGGAGAGTaGGTTGCAGTACTGGTCGAT | + |
Preference number: 4 (lower is better) Translates to: RDEEIWPRLTVQRERLTQADVGE*VAVLVD Trigger: ATCGACCAGTACTGCAACCCACTCTCCGACATCAGC...TTGTGTCAGTCTCTCCCGCTGGACAGTCAGTCGGGGCCATATTTCCTCATCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | AGAGATGAGGAAATATGGCCCCGACTGACTGTCCAGCGGGAGAGACTGACACAAAGCTCCACAATGCTGTaGATCTGGGCCTGGATGTCT | + |
Preference number: 4 (lower is better) Translates to: RDEEIWPRLTVQRERLTQSSTML*IWAWMS Trigger: AGACATCCAGGCCCAGATCCACAGCATTGTGGAGCT...TTGTGTCAGTCTCTCCCGCTGGACAGTCAGTCGGGGCCATATTTCCTCATCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR TCA 90 bp | AGGGATGGGAAGGGGGTGAGAGGACAGAATGTCACACACTGTCACCACGGGACATCCAGCACTTGGCTCTaGAGTTCTATCTCCATTATC | + |
Preference number: 4 (lower is better) Translates to: RDGKGVRGQNVTHCHHGTSSTWL*SSISII Trigger: GATAATGGAGATAGAACTTCAGAGCCAAGTGCTGGA...TGTCCCGTGGTGACAGTGTGTGACATTCTGTCCTCTCACCCCCTTCCCATCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | AGAATGTCACACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACAGGCTGTGTCCTCCTTTaGACTGTAAATATTCTGCAC | + |
Preference number: 4 (lower is better) Translates to: RMSHTVTTGQAHEPCHGTGCVLL*TVNILH Trigger: GTGCAGAATATTTACAGTGCAAAGGAGGACACAGCC...TGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTGTGACATTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | AATGTCACACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGCTGAAAAGAACCGCTTaGAGAAGGAAGCTACAATCT | + |
Preference number: 4 (lower is better) Translates to: NVTHCHHGTSTRAMPRDTLKRTA*RRKLQS Trigger: AGATTGTAGCTTCCTTCTCCAAGCGGTTCTTTTCAG...CGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTGTGACATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | CAAATACCAACTTACACGAGTGATATAGGCTCCCTCAGCCAAACGAAGCCTTCGCACCGCAGCAGGAAGTaGCTTGGGAAGTTGACAGGC | + |
Preference number: 4 (lower is better) Translates to: QIPTYTSDIGSLSQTKPSHRSRK*LGKLTG Trigger: GCCTGTCAACTTCCCAAGCCACTTCCTGCTGCGGTG...CGAAGGCTTCGTTTGGCTGAGGGAGCCTATATCACTCGTGTAAGTTGGTATTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR TCA 90 bp | AGGGTCTGGATGTGTGACTCAGGAGTGACAGGGAACATGACACCTGTCTCCCCTTCCAGCACTTGGCTCTaGAGTTCTATCTCCATTATC | + |
Preference number: 4 (lower is better) Translates to: RVWMCDSGVTGNMTPVSPSSTWL*SSISII Trigger: GATAATGGAGATAGAACTTCAGAGCCAAGTGCTGGA...AGGGGAGACAGGTGTCATGTTCCCTGTCACTCCTGAGTCACACATCCAGACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR TCA 90 bp | ACACTCTCAAAATGGAGGGTCTGGATGTGTGACTCAGGAGTGACAGGGAACATGAGAGCAGAGACATGCTaGTGGGGATTCCTGTTCTGC | + |
Preference number: 4 (lower is better) Translates to: TLSKWRVWMCDSGVTGNMRAETC*WGFLFC Trigger: GCAGAACAGGAATCCCCATCAGCATGTCTCTGCTCT...CATGTTCCCTGTCACTCCTGAGTCACACATCCAGACCCTCCATTTTGAGAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | CAGAATGTCACACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACTCTAACCCAGCTTTCTaGCGAACTTTATATTCCTCT | + |
Preference number: 4 (lower is better) Translates to: QNVTHCHHGTSTRAMPRDSNPAF*RTLYSS Trigger: AGAGGAATATAAAGTTCGGCAGAAAGCTGGGTTAGA...GTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTGTGACATTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | GCTGTCTGTGGCTGGAGGAGCGCACACCATCTAAAGTGGGGAGGCAGCCAGGCTGTAGAGAATTTTCTTTaGGTAGTATTTCCAGGTCAA | + |
Preference number: 4 (lower is better) Translates to: AVCGWRSAHHLKWGGSQAVENFL*VVFPGQ Trigger: TTGACCTGGAAATACTACGCAAAGAAAATTCTCTAC...AGCCTGGCTGCCTCCCCACTTTAGATGGTGTGCGCTCCTCCAGCCACAGACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | CACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTGCCTTTCGTAGAGAATTTTCTTTaGGTAGTATTTCCAGGTCAA | + |
Preference number: 4 (lower is better) Translates to: HCHHGTSTRAMPRDTVPFVENFL*VVFPGQ Trigger: TTGACCTGGAAATACTACGCAAAGAAAATTCTCTAC...GAAAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | GGTCAGGGAGGGAAGCCATCTTTCTCAGCTTTGACGTTTCTCTACAGGAAAAAGTGGGGATTCCTGTTCTaGGGGTCAACACCTGGTGCA | + |
Preference number: 4 (lower is better) Translates to: GQGGKPSFSALTFLYRKKWGFLF*GSTPGA Trigger: TGCACCAGGTGTTGACCCGCAGAACAGGAATCCCCA...CTTTTTCCTGTAGAGAAACGTCAAAGCTGAGAAAGATGGCTTCCCTCCCTGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | AAGAACAGACCCGTTCTCTTGGTTTGGGGACCAGGAGGTACAAGTTTTAAGAGCTGGGGATTCCTGTTCTaGGGGTCAACACCTGGTGCA | + |
Preference number: 4 (lower is better) Translates to: KNRPVLLVWGPGGTSFKSWGFLF*GSTPGA Trigger: TGCACCAGGTGTTGACCCGCAGAACAGGAATCCCCA...GCTCTTAAAACTTGTACCTCCTGGTCCCCAAACCAAGAGAACGGGTCTGTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | GGTCAGGGAGGGAAGCCATCTTTCTCAGCTTTGACGTTTCTCTACAGGAAAAAGCAATGCCTTCCCTCTTaGCCAGGCTCAGCAAGTTGC | + |
Preference number: 4 (lower is better) Translates to: GQGGKPSFSALTFLYRKKQCLPS*PGSASC Trigger: GCAACTTGCTGAGCCTGGGCAAGAGGGAAGGCATTG...CTTTTTCCTGTAGAGAAACGTCAAAGCTGAGAAAGATGGCTTCCCTCCCTGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | AGGGTCTGGATGTGTGACTCAGGAGTGACAGGGAACATGACACCTGTCTCCCCTGGCTGTGTCCTCCTTTaGACTGTAAATATTCTGCAC | + |
Preference number: 4 (lower is better) Translates to: RVWMCDSGVTGNMTPVSPGCVLL*TVNILH Trigger: GTGCAGAATATTTACAGTGCAAAGGAGGACACAGCC...AGGGGAGACAGGTGTCATGTTCCCTGTCACTCCTGAGTCACACATCCAGACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | ACACTCTCAAAATGGAGGGTCTGGATGTGTGACTCAGGAGTGACAGGGAACATGCTGTGGATCTGGGCCTaGATGTCTCTGAAGCTGATG | + |
Preference number: 4 (lower is better) Translates to: TLSKWRVWMCDSGVTGNMLWIWA*MSLKLM Trigger: CATCAGCTTCAGAGACATCCAGGCCCAGATCCACAG...CATGTTCCCTGTCACTCCTGAGTCACACATCCAGACCCTCCATTTTGAGAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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3UTR CAA 72 bp | CTCCGCTCACTACAGCAACACAGGACAGATGTGCCATaGGCCCAGTGGGTAGTTTTACTTATGGGACTGCTT | + |
Preference number: 4 (lower is better) Translates to: LRSLQQHRTDVP*AQWVVLLMGLL Trigger: AAGCAGTCCCATAAGTAAAACTACCCACTGGGCCAATGGCACATCTGTCCTGTGTTGCTGTAGTGAGCGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | CAAGCACACGAGCCATGCCACGGGACACGGTGCCTTTCAACTGATTCACTAGTGCTGAAAAGAACCGCTTaGAGAAGGAAGCTACAATCT | + |
Preference number: 4 (lower is better) Translates to: QAHEPCHGTRCLSTDSLVLKRTA*RRKLQS Trigger: AGATTGTAGCTTCCTTCTCCAAGCGGTTCTTTTCAG...CACTAGTGAATCAGTTGAAAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | AAGAACAGACCCGTTCTCTTGGTTTGGGGACCAGGAGGTACAAGTTTTAAGAGCCTGTGGATCTGGGCCTaGATGTCTCTGAAGCTGATG | + |
Preference number: 4 (lower is better) Translates to: KNRPVLLVWGPGGTSFKSLWIWA*MSLKLM Trigger: CATCAGCTTCAGAGACATCCAGGCCCAGATCCACAG...GCTCTTAAAACTTGTACCTCCTGGTCCCCAAACCAAGAGAACGGGTCTGTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | GATCAGAAGAACAGACCCGTTCTCTTGGTTTGGGGACCAGGAGGTACAAGTTTTAGCTCCACAATGCTGTaGATCTGGGCCTGGATGTCT | + |
Preference number: 4 (lower is better) Translates to: DQKNRPVLLVWGPGGTSFSSTML*IWAWMS Trigger: AGACATCCAGGCCCAGATCCACAGCATTGTGGAGCT...AAAACTTGTACCTCCTGGTCCCCAAACCAAGAGAACGGGTCTGTTCTTCTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | CAAATACCAACTTACACGAGTGATATAGGCTCCCTCAGCCAAACGAAGCCTTCGAGCTCCACAATGCTGTaGATCTGGGCCTGGATGTCT | + |
Preference number: 4 (lower is better) Translates to: QIPTYTSDIGSLSQTKPSSSTML*IWAWMS Trigger: AGACATCCAGGCCCAGATCCACAGCATTGTGGAGCT...CGAAGGCTTCGTTTGGCTGAGGGAGCCTATATCACTCGTGTAAGTTGGTATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | GGTCAGGGAGGGAAGCCATCTTTCTCAGCTTTGACGTTTCTCTACAGGAAAAAGCCATTACAGGGGACGTaGTCTGAAAAGAACCGCTTG | + |
Preference number: 4 (lower is better) Translates to: GQGGKPSFSALTFLYRKKPLQGT*SEKNRL Trigger: CAAGCGGTTCTTTTCAGAGCACGTCCCCTGTAATGG...CTTTTTCCTGTAGAGAAACGTCAAAGCTGAGAAAGATGGCTTCCCTCCCTGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | TCTGGTAAAGGCTTGCTCCTCACTCACAGACAGCATCAGGCAGAAGCCAAGGGTCTGAAAAGAACCGCTTaGAGAAGGAAGCTACAATCT | + |
Preference number: 4 (lower is better) Translates to: SGKGLLLTHRQHQAEAKGLKRTA*RRKLQS Trigger: AGATTGTAGCTTCCTTCTCCAAGCGGTTCTTTTCAG...ACCCTTGGCTTCTGCCTGATGCTGTCTGTGAGTGAGGAGCAAGCCTTTACCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | GATCAGAAGAACAGACCCGTTCTCTTGGTTTGGGGACCAGGAGGTACAAGTTTTTCATCACAAGCCCGATaGAGTAGCAGACATCCCTGT | + |
Preference number: 4 (lower is better) Translates to: DQKNRPVLLVWGPGGTSFSSQAR*SSRHPC Trigger: ACAGGGATGTCTGCTACTCCATCGGGCTTGTGATGA...AAAACTTGTACCTCCTGGTCCCCAAACCAAGAGAACGGGTCTGTTCTTCTGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR CCA 90 bp | AAGAACAGACCCGTTCTCTTGGTTTGGGGACCAGGAGGTACAAGTTTTAAGAGCTCATCACAAGCCCGATaGAGTAGCAGACATCCCTGT | + |
Preference number: 4 (lower is better) Translates to: KNRPVLLVWGPGGTSFKSSSQAR*SSRHPC Trigger: ACAGGGATGTCTGCTACTCCATCGGGCTTGTGATGA...GCTCTTAAAACTTGTACCTCCTGGTCCCCAAACCAAGAGAACGGGTCTGTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | ACTGGAGTAGATCTTAAAGTTAACCAAGGAGTAGTCATCTTAAAGGAGCAGCTCCATAGAGGACTCACCTaGCCTGAAGGTCAGGCTGGG | + |
Preference number: 4 (lower is better) Translates to: TGVDLKVNQGVVILKEQLHRGLT*PEGQAG Trigger: CCCAGCCTGACCTTCAGGGCAGGTGAGTCCTCTATG...GAGCTGCTCCTTTAAGATGACTACTCCTTGGTTAACTTTAAGATCTACTCCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR TCA 90 bp | CAAATACCAACTTACACGAGTGATATAGGCTCCCTCAGCCAAACGAAGCCTTCGTCCAGCACTTGGCTCTaGAGTTCTATCTCCATTATC | + |
Preference number: 4 (lower is better) Translates to: QIPTYTSDIGSLSQTKPSSSTWL*SSISII Trigger: GATAATGGAGATAGAACTTCAGAGCCAAGTGCTGGA...CGAAGGCTTCGTTTGGCTGAGGGAGCCTATATCACTCGTGTAAGTTGGTATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR TCA 90 bp | ACTGGAGTAGATCTTAAAGTTAACCAAGGAGTAGTCATCTTAAAGGAGCAGCTCGGGTGCGAGATTTCCTaGGGCTCCACGTTGTATTCC | + |
Preference number: 4 (lower is better) Translates to: TGVDLKVNQGVVILKEQLGCEIS*GSTLYS Trigger: GGAATACAACGTGGAGCCTCAGGAAATCTCGCACCC...GAGCTGCTCCTTTAAGATGACTACTCCTTGGTTAACTTTAAGATCTACTCCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR TCA 90 bp | ACTGGAGTAGATCTTAAAGTTAACCAAGGAGTAGTCATCTTAAAGGAGCAGCTCAGAGCAGAGACATGCTaGTGGGGATTCCTGTTCTGC | + |
Preference number: 4 (lower is better) Translates to: TGVDLKVNQGVVILKEQLRAETC*WGFLFC Trigger: GCAGAACAGGAATCCCCATCAGCATGTCTCTGCTCT...GAGCTGCTCCTTTAAGATGACTACTCCTTGGTTAACTTTAAGATCTACTCCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | ACTGGAGTAGATCTTAAAGTTAACCAAGGAGTAGTCATCTTAAAGGAGCAGCTCTGCCACGGAGGGTTTTaGACACAAGCTCCACAATGC | + |
Preference number: 4 (lower is better) Translates to: TGVDLKVNQGVVILKEQLCHGGF*TQAPQC Trigger: GCATTGTGGAGCTTGTGTGCAAAACCCTCCGTGGCA...GAGCTGCTCCTTTAAGATGACTACTCCTTGGTTAACTTTAAGATCTACTCCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | CACAGGACAGATGTGCCATTGGCCCAGTGGGTAGTTTTACTTATGGGACTGCTTGTAGAGAATTTTCTTTaGGTAGTATTTCCAGGTCAA | + |
Preference number: 4 (lower is better) Translates to: HRTDVPLAQWVVLLMGLLVENFL*VVFPGQ Trigger: TTGACCTGGAAATACTACGCAAAGAAAATTCTCTAC...AAGCAGTCCCATAAGTAAAACTACCCACTGGGCCAATGGCACATCTGTCCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR GCA 90 bp | ACTGGAGTAGATCTTAAAGTTAACCAAGGAGTAGTCATCTTAAAGGAGCAGCTCTCTAACCCAGCTTTCTaGCGAACTTTATATTCCTCT | + |
Preference number: 4 (lower is better) Translates to: TGVDLKVNQGVVILKEQLSNPAF*RTLYSS Trigger: AGAGGAATATAAAGTTCGGCAGAAAGCTGGGTTAGA...GAGCTGCTCCTTTAAGATGACTACTCCTTGGTTAACTTTAAGATCTACTCCAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS GCA 90 bp | AGCGAGCCGCTGCACAGGATGTACTCCAGCACCTCGCCCGGCAGCTaGACCAGGCAGCTGGGGCCCGTCGCCTCAGCCGCGGCCTCCTCG | + |
Preference number: 5 (lower is better) Translates to: SEPLHRMYSSTSPGS*TRQLGPVASAAASS Trigger: CGAGGAGGCCGCGGCTGAGGCGACGGGCCCCAGCTGCCTGGTGCAGCTGCCGGGCGAGGTGCTGGAGTACATCCTGTGCAGCGGCTCGCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS CCA 90 bp | GGCCACCTCACCCGGAACTGCTCCTTCCACACCTGCCCGCTGCTCTaGCACACCTCGCGCAGGCGGCGGCAGGTGCTGGACACGCGGCCG | + |
Preference number: 5 (lower is better) Translates to: GHLTRNCSFHTCPLL*HTSRRRRQVLDTRP Trigger: CGGCCGCGTGTCCAGCACCTGCCGCCGCCTGCGCGAGGTGTGCCAGAGCAGCGGGCAGGTGTGGAAGGAGCAGTTCCGGGTGAGGTGGCC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS TCA 90 bp | GCAGGCGGCGGCAGGTGCTGGACACGCGGCCGATGTCCAGCGCCGTaGGCGAGCCGCTGCACAGGATGTACTCCAGCACCTCGCCCGGCA | + |
Preference number: 5 (lower is better) Translates to: AGGGRCWTRGRCPAP*ASRCTGCTPAPRPA Trigger: TGCCGGGCGAGGTGCTGGAGTACATCCTGTGCAGCGGCTCGCTCACGGCGCTGGACATCGGCCGCGTGTCCAGCACCTGCCGCCGCCTGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS GCA 90 bp | GGGAGGGCCACCTCACCCGGAACTGCTCCTTCCACACCTGCCCGCTaGTCTGGCACACCTCGCGCAGGCGGCGGCAGGTGCTGGACACGC | + |
Preference number: 5 (lower is better) Translates to: GRATSPGTAPSTPAR*SGTPRAGGGRCWTR Trigger: GCGTGTCCAGCACCTGCCGCCGCCTGCGCGAGGTGTGCCAGAGCAGCGGGCAGGTGTGGAAGGAGCAGTTCCGGGTGAGGTGGCCCTCCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS GCA 90 bp | TTCATCAGGGAGGGCCACCTCACCCGGAACTGCTCCTTCCACACCTaGCCGCTGCTCTGGCACACCTCGCGCAGGCGGCGGCAGGTGCTG | + |
Preference number: 5 (lower is better) Translates to: FIREGHLTRNCSFHT*PLLWHTSRRRRQVL Trigger: CAGCACCTGCCGCCGCCTGCGCGAGGTGTGCCAGAGCAGCGGGCAGGTGTGGAAGGAGCAGTTCCGGGTGAGGTGGCCCTCCCTGATGAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS TCA 90 bp | CTTCTGCACCTTGGCACCACCGCAGCAGGAAGTGGCTTGGGAAGTTaGCAGGCTCCAGGGGAACCCCCAGCTGCCGGGCGACGGTCAGGT | + |
Preference number: 5 (lower is better) Translates to: LLHLGTTAAGSGLGS*QAPGEPPAAGRRSG Trigger: ACCTGACCGTCGCCCGGCAGCTGGGGGTTCCCCTGGAGCCTGTCAACTTCCCAAGCCACTTCCTGCTGCGGTGGTGCCAAGGTGCAGAAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | CTGTCCTGTGCTGACTCCAGGGGCAGCACACGTCCTTCAGGAATCCTGGTCCCCCTGGGGTGGCGGCTGTaGATGCCACGGAGGGTTTTG | + |
Preference number: 5 (lower is better) Translates to: LSCADSRGSTRPSGILVPLGWRL*MPRRVL Trigger: CAAAACCCTCCGTGGCATCAACAGCCGCCACCCCAG...GGGGACCAGGATTCCTGAAGGACGTGTGCTGCCCCTGGAGTCAGCACAGGACAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | CTGTCCTGTGCTGACTCCAGGGGCAGCACACGTCCTTCAGGAATCCTGGTCCCCCCCAGGCTCAGCAAGTaGCCCACCATCCGCTGTAGC | + |
Preference number: 5 (lower is better) Translates to: LSCADSRGSTRPSGILVPPRLSK*PTIRCS Trigger: GCTACAGCGGATGGTGGGCAACTTGCTGAGCCTGGG...GGGGACCAGGATTCCTGAAGGACGTGTGCTGCCCCTGGAGTCAGCACAGGACAG 63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | CTCCAGGGGCAGCACACGTCCTTCAGGAATCCTGGTCCCCTAGAAGGTAGCAGCCTGGGGTGGCGGCTGTaGATGCCACGGAGGGTTTTG | + |
Preference number: 5 (lower is better) Translates to: LQGQHTSFRNPGPLEGSSLGWRL*MPRRVL Trigger: CAAAACCCTCCGTGGCATCAACAGCCGCCACCCCAG...GCTGCTACCTTCTAGGGGACCAGGATTCCTGAAGGACGTGTGCTGCCCCTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS TCA 90 bp | GCACCTGGTCCGGGTACATCGCCAGGTACAGGTCCAAGGAGTCTCTaGGGAGCTGGTAGGACTGGTCAATGCCTTCCCTCTTGCCCAGGC | + |
Preference number: 5 (lower is better) Translates to: APGPGTSPGTGPRSL*GAGRTGQCLPSCPG Trigger: GCCTGGGCAAGAGGGAAGGCATTGACCAGTCCTACCAGCTCCTCAGAGACTCCTTGGACCTGTACCTGGCGATGTACCCGGACCAGGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | CACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTGCCTTTCCAAAGATGTCCAGGGTaGCCCCTTCTGCACCTTGGC | + |
Preference number: 5 (lower is better) Translates to: HCHHGTSTRAMPRDTVPFQRCPG*PLLHLG Trigger: GCCAAGGTGCAGAAGGGGCAACCCTGGACATCTTTG...GAAAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | GCTGTCTGTGGCTGGAGGAGCGCACACCATCTAAAGTGGGGAGGCAGCCAGGCTGAAGTAGAGTCTGGCTaGGAGGAGCAGGAGCTGCAC | + |
Preference number: 5 (lower is better) Translates to: AVCGWRSAHHLKWGGSQAEVESG*EEQELH Trigger: GTGCAGCTCCTGCTCCTCCAAGCCAGACTCTACTTC...AGCCTGGCTGCCTCCCCACTTTAGATGGTGTGCGCTCCTCCAGCCACAGACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS TCA 90 bp | GAACCCCCAGCTGCCGGGCGACGGTCAGGTAGAGCAGAGACATGCTaGTGGGGATTCCTGTTCTGCGGGTCAACACCTGGTGCATGTAGA | + |
Preference number: 5 (lower is better) Translates to: EPPAAGRRSGRAETC*WGFLFCGSTPGACR Trigger: TCTACATGCACCAGGTGTTGACCCGCAGAACAGGAATCCCCATCAGCATGTCTCTGCTCTACCTGACCGTCGCCCGGCAGCTGGGGGTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | AGGGATGGGAAGGGGGTGAGAGGACAGAATGTCACACACTGTCACCACGGGACACTGGGGTGGCGGCTGTaGATGCCACGGAGGGTTTTG | + |
Preference number: 5 (lower is better) Translates to: RDGKGVRGQNVTHCHHGTLGWRL*MPRRVL Trigger: CAAAACCCTCCGTGGCATCAACAGCCGCCACCCCAG...TGTCCCGTGGTGACAGTGTGTGACATTCTGTCCTCTCACCCCCTTCCCATCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | TGGGAAGGGGGTGAGAGGACAGAATGTCACACACTGTCACCACGGGACAAGCACCCCAGGCTCAGCAAGTaGCCCACCATCCGCTGTAGC | + |
Preference number: 5 (lower is better) Translates to: WEGGERTECHTLSPRDKHPRLSK*PTIRCS Trigger: GCTACAGCGGATGGTGGGCAACTTGCTGAGCCTGGG...GTGCTTGTCCCGTGGTGACAGTGTGTGACATTCTGTCCTCTCACCCCCTTCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | GTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTGCCTTTCAACTGAAGTAGAGTCTGGCTaGGAGGAGCAGGAGCTGCAC | + |
Preference number: 5 (lower is better) Translates to: VTTGQAHEPCHGTRCLSTEVESG*EEQELH Trigger: GTGCAGCTCCTGCTCCTCCAAGCCAGACTCTACTTC...AGTTGAAAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS TCA 90 bp | GCACCTGGTCCGGGTACATCGCCAGGTACAGGTCCAAGGAGTCTCTaGGGAGCTGGTAGGACTGGTCAATGCCTTCCCCTTCTGCACCTT | + |
Preference number: 5 (lower is better) Translates to: APGPGTSPGTGPRSL*GAGRTGQCLPLLHL Trigger: AAGGTGCAGAAGGGGAAGGCATTGACCAGTCCTACCAGCTCCTCAGAGACTCCTTGGACCTGTACCTGGCGATGTACCCGGACCAGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201611.2 |
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CDS-3UTR CAA 90 bp | CACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTGCCTTTCATGCCACGGAGGGTTTaGCACACAAGCTCCACAATG | + |
Preference number: 5 (lower is better) Translates to: HCHHGTSTRAMPRDTVPFMPRRV*HTSSTM Trigger: CATTGTGGAGCTTGTGTGCAAAACCCTCCGTGGCAT...GAAAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | CAGAATGTCACACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACCAAAGATGTCCAGGGTaGCCCCTTCTGCACCTTGGC | + |
Preference number: 5 (lower is better) Translates to: QNVTHCHHGTSTRAMPRDQRCPG*PLLHLG Trigger: GCCAAGGTGCAGAAGGGGCAACCCTGGACATCTTTG...GTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTGTGACATTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS GCA 90 bp | GGTAGGACTGGTCAATGCCTTCCCTCTTGCCCAGGCTCAGCAAGTTaGCCACCATCCGCTGTAGCACCTTCTTCACATTCACCACGCCGT | + |
Preference number: 5 (lower is better) Translates to: GRTGQCLPSCPGSAS*PPSAVAPSSHSPRR Trigger: ACGGCGTGGTGAATGTGAAGAAGGTGCTACAGCGGATGGTGGGCAACTTGCTGAGCCTGGGCAAGAGGGAAGGCATTGACCAGTCCTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS CCA 90 bp | CACAAACTCCAGGTCCTCGGGGTACCGGATCTCCAGCTCTGCATTTaGGATGTAGTGTGTGCCTGTGAACTCCGAGAAGTAGCGCCCCAC | + |
Preference number: 5 (lower is better) Translates to: HKLQVLGVPDLQLCI*DVVCACELREVAPH Trigger: GTGGGGCGCTACTTCTCGGAGTTCACAGGCACACACTACATCCCAAATGCAGAGCTGGAGATCCGGTACCCCGAGGACCTGGAGTTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | TGTCACACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTATGCCACGGAGGGTTTaGCACACAAGCTCCACAATG | + |
Preference number: 5 (lower is better) Translates to: CHTLSPRDKHTSHATGHGMPRRV*HTSSTM Trigger: CATTGTGGAGCTTGTGTGCAAAACCCTCCGTGGCAT...ACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTGTGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | TGGGAAGGGGGTGAGAGGACAGAATGTCACACACTGTCACCACGGGACAAGCACAAGTGGCTTGGGAAGTaGACAGGCTCCAGGGGAACC | + |
Preference number: 5 (lower is better) Translates to: WEGGERTECHTLSPRDKHKWLGK*TGSRGT Trigger: GGTTCCCCTGGAGCCTGTCAACTTCCCAAGCCACTT...GTGCTTGTCCCGTGGTGACAGTGTGTGACATTCTGTCCTCTCACCCCCTTCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | TGGGAAGGGGGTGAGAGGACAGAATGTCACACACTGTCACCACGGGACAAGCACGAAGTAGAGTCTGGCTaGGAGGAGCAGGAGCTGCAC | + |
Preference number: 5 (lower is better) Translates to: WEGGERTECHTLSPRDKHEVESG*EEQELH Trigger: GTGCAGCTCCTGCTCCTCCAAGCCAGACTCTACTTC...GTGCTTGTCCCGTGGTGACAGTGTGTGACATTCTGTCCTCTCACCCCCTTCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS CCA 90 bp | TCCATTATCATAGAGGACTCACCTGCCCTGAAGGTCAGGCTGGGGTaGCGGCTGTTGATGCCACGGAGGGTTTTGCACACAAGCTCCACA | + |
Preference number: 5 (lower is better) Translates to: SIIIEDSPALKVRLG*RLLMPRRVLHTSST Trigger: TGTGGAGCTTGTGTGCAAAACCCTCCGTGGCATCAACAGCCGCCACCCCAGCCTGACCTTCAGGGCAGGTGAGTCCTCTATGATAATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | GGGCAGCACACGTCCTTCAGGAATCCTGGTCCCCTAGAAGGTAGCAGCAGCAGCTTCACTGTCAGCTGCTaGCCCTTCCCAAAAGCATCT | + |
Preference number: 5 (lower is better) Translates to: GQHTSFRNPGPLEGSSSSFTVSC*PFPKAS Trigger: AGATGCTTTTGGGAAGGGCAAGCAGCTGACAGTGAA...GCTGCTGCTGCTACCTTCTAGGGGACCAGGATTCCTGAAGGACGTGTGCTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS TCA 90 bp | GGTACCGGATCTCCAGCTCTGCATTTGGGATGTAGTGTGTGCCTGTaGACTCCGAGAAGTAGCGCCCCACATCTGGGTGCGAGATTTCCT | + |
Preference number: 5 (lower is better) Translates to: GTGSPALHLGCSVCL*TPRSSAPHLGARFP Trigger: AGGAAATCTCGCACCCAGATGTGGGGCGCTACTTCTCGGAGTTCACAGGCACACACTACATCCCAAATGCAGAGCTGGAGATCCGGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS GCA 90 bp | CTCGTACACAAACTCCAGGTCCTCGGGGTACCGGATCTCCAGCTCTaGATTTGGGATGTAGTGTGTGCCTGTGAACTCCGAGAAGTAGCG | + |
Preference number: 5 (lower is better) Translates to: LVHKLQVLGVPDLQL*IWDVVCACELREVA Trigger: CGCTACTTCTCGGAGTTCACAGGCACACACTACATCCCAAATGCAGAGCTGGAGATCCGGTACCCCGAGGACCTGGAGTTTGTGTACGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS CCA 90 bp | CGGAGGGTTTTGCACACAAGCTCCACAATGCTGTGGATCTGGGCCTaGATGTCTCTGAAGCTGATGTCGGAGAGTGGGTTGCAGTACTGG | + |
Preference number: 5 (lower is better) Translates to: RRVLHTSSTMLWIWA*MSLKLMSESGLQYW Trigger: CCAGTACTGCAACCCACTCTCCGACATCAGCTTCAGAGACATCCAGGCCCAGATCCACAGCATTGTGGAGCTTGTGTGCAAAACCCTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS CCA 90 bp | ATGCCACGGAGGGTTTTGCACACAAGCTCCACAATGCTGTGGATCTaGGCCTGGATGTCTCTGAAGCTGATGTCGGAGAGTGGGTTGCAG | + |
Preference number: 5 (lower is better) Translates to: MPRRVLHTSSTMLWI*AWMSLKLMSESGLQ Trigger: CTGCAACCCACTCTCCGACATCAGCTTCAGAGACATCCAGGCCCAGATCCACAGCATTGTGGAGCTTGTGTGCAAAACCCTCCGTGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | CCCACCTCCATGCCCTTCTCCAAGTACAATCTAACGGAAGGCAGAGGGCGGCAGTTCACTGTCAGCTGCTaGCCCTTCCCAAAAGCATCT | + |
Preference number: 5 (lower is better) Translates to: PTSMPFSKYNLTEGRGRQFTVSC*PFPKAS Trigger: AGATGCTTTTGGGAAGGGCAAGCAGCTGACAGTGAA...CTGCCGCCCTCTGCCTTCCGTTAGATTGTACTTGGAGAAGGGCATGGAGGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | GTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTGCCTTTCAACTGTATTCCAGGTTTTCTaGGGCTGCATATCTGCAGGA | + |
Preference number: 5 (lower is better) Translates to: VTTGQAHEPCHGTRCLSTVFQVF*GCISAG Trigger: TCCTGCAGATATGCAGCCCAAGAAAACCTGGAATAC...AGTTGAAAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | GTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTGCCTTTCAACTCGGCTGTGTCCTCCTTaGCACTGTAAATATTCTGCA | + |
Preference number: 5 (lower is better) Translates to: VTTGQAHEPCHGTRCLSTRLCPP*HCKYSA Trigger: TGCAGAATATTTACAGTGCAAAGGAGGACACAGCCG...AGTTGAAAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | TGTCACACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTCGGCTGTGTCCTCCTTaGCACTGTAAATATTCTGCA | + |
Preference number: 5 (lower is better) Translates to: CHTLSPRDKHTSHATGHGRLCPP*HCKYSA Trigger: TGCAGAATATTTACAGTGCAAAGGAGGACACAGCCG...ACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTGTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | TCTGGTAAAGGCTTGCTCCTCACTCACAGACAGCATCAGGCAGAAGCCAAGGGTTCAATGCCTTCCCTCTaGCCCAGGCTCAGCAAGTTG | + |
Preference number: 5 (lower is better) Translates to: SGKGLLLTHRQHQAEAKGSMPSL*PRLSKL Trigger: CAACTTGCTGAGCCTGGGCAAGAGGGAAGGCATTGA...ACCCTTGGCTTCTGCCTGATGCTGTCTGTGAGTGAGGAGCAAGCCTTTACCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS CCA 90 bp | TCACACAGTTGTAGCCGTACCTCTTATGCTTCATCACAAGCCCGATaGAGTAGCAGACATCCCTGTGCTTCTCCTCGGAGCGCAGCTTCA | + |
Preference number: 5 (lower is better) Translates to: SHSCSRTSYASSQAR*SSRHPCASPRSAAS Trigger: TGAAGCTGCGCTCCGAGGAGAAGCACAGGGATGTCTGCTACTCCATCGGGCTTGTGATGAAGCATAAGAGGTACGGCTACAACTGTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS CCA 90 bp | GATGTAGTGTGTGCCTGTGAACTCCGAGAAGTAGCGCCCCACATCTaGGTGCGAGATTTCCTGAGGCTCCACGTTGTATTCCAGGTTTTC | + |
Preference number: 5 (lower is better) Translates to: DVVCACELREVAPHI*VRDFLRLHVVFQVF Trigger: GAAAACCTGGAATACAACGTGGAGCCTCAGGAAATCTCGCACCCAGATGTGGGGCGCTACTTCTCGGAGTTCACAGGCACACACTACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | CACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTGCCTTTCAGTAGAGAATTTTCTTaGCGTAGTATTTCCAGGTCA | + |
Preference number: 5 (lower is better) Translates to: HCHHGTSTRAMPRDTVPFSREFS*RSISRS Trigger: TGACCTGGAAATACTACGCAAAGAAAATTCTCTACT...GAAAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | CACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGGTGCCTTAGTAGAGAATTTTCTTaGCGTAGTATTTCCAGGTCA | + |
Preference number: 5 (lower is better) Translates to: HTVTTGQAHEPCHGTRCLSREFS*RSISRS Trigger: TGACCTGGAAATACTACGCAAAGAAAATTCTCTACT...AAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | GGTCAGGGAGGGAAGCCATCTTTCTCAGCTTTGACGTTTCTCTACAGGAAAAAGAAGTGGCTTGGGAAGTaGACAGGCTCCAGGGGAACC | + |
Preference number: 5 (lower is better) Translates to: GQGGKPSFSALTFLYRKKKWLGK*TGSRGT Trigger: GGTTCCCCTGGAGCCTGTCAACTTCCCAAGCCACTT...CTTTTTCCTGTAGAGAAACGTCAAAGCTGAGAAAGATGGCTTCCCTCCCTGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | CAAGCACACGAGCCATGCCACGGGACACGGTGCCTTTCAACTGATTCACTAGTGCGGCTGTGTCCTCCTTaGCACTGTAAATATTCTGCA | + |
Preference number: 5 (lower is better) Translates to: QAHEPCHGTRCLSTDSLVRLCPP*HCKYSA Trigger: TGCAGAATATTTACAGTGCAAAGGAGGACACAGCCG...CACTAGTGAATCAGTTGAAAGGCACCGTGTCCCGTGGCATGGCTCGTGTGCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | GATCAGAAGAACAGACCCGTTCTCTTGGTTTGGGGACCAGGAGGTACAAGTTTTTCAATGCCTTCCCTCTaGCCCAGGCTCAGCAAGTTG | + |
Preference number: 5 (lower is better) Translates to: DQKNRPVLLVWGPGGTSFSMPSL*PRLSKL Trigger: CAACTTGCTGAGCCTGGGCAAGAGGGAAGGCATTGA...AAAACTTGTACCTCCTGGTCCCCAAACCAAGAGAACGGGTCTGTTCTTCTGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | TCTGGTAAAGGCTTGCTCCTCACTCACAGACAGCATCAGGCAGAAGCCAAGGGTGTATTCCAGGTTTTCTaGGGCTGCATATCTGCAGGA | + |
Preference number: 5 (lower is better) Translates to: SGKGLLLTHRQHQAEAKGVFQVF*GCISAG Trigger: TCCTGCAGATATGCAGCCCAAGAAAACCTGGAATAC...ACCCTTGGCTTCTGCCTGATGCTGTCTGTGAGTGAGGAGCAAGCCTTTACCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | AATGTCACACACTGTCACCACGGGACAAGCACACGAGCCATGCCACGGGACACGAGTAGAGAATTTTCTTaGCGTAGTATTTCCAGGTCA | + |
Preference number: 5 (lower is better) Translates to: NVTHCHHGTSTRAMPRDTSREFS*RSISRS Trigger: TGACCTGGAAATACTACGCAAAGAAAATTCTCTACT...CGTGTCCCGTGGCATGGCTCGTGTGCTTGTCCCGTGGTGACAGTGTGTGACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS GCA 90 bp | CGTGCTGGCCAATCAGGTACTCACACTCTTTCACTGTCAGCTGCTTaGCCTTCCCAAAAGCATCTATGTAGATGTAGTCAAAGATGTCCA | + |
Preference number: 5 (lower is better) Translates to: RAGQSGTHTLSLSAA*PSQKHLCRCSQRCP Trigger: TGGACATCTTTGACTACATCTACATAGATGCTTTTGGGAAGGGCAAGCAGCTGACAGTGAAAGAGTGTGAGTACCTGATTGGCCAGCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | ACTGGAGTAGATCTTAAAGTTAACCAAGGAGTAGTCATCTTAAAGGAGCAGCTCAAGTGGCTTGGGAAGTaGACAGGCTCCAGGGGAACC | + |
Preference number: 5 (lower is better) Translates to: TGVDLKVNQGVVILKEQLKWLGK*TGSRGT Trigger: GGTTCCCCTGGAGCCTGTCAACTTCCCAAGCCACTT...GAGCTGCTCCTTTAAGATGACTACTCCTTGGTTAACTTTAAGATCTACTCCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS-3UTR CAA 90 bp | GGTCAGGGAGGGAAGCCATCTTTCTCAGCTTTGACGTTTCTCTACAGGAAAAAGGTATTCCAGGTTTTCTaGGGCTGCATATCTGCAGGA | + |
Preference number: 5 (lower is better) Translates to: GQGGKPSFSALTFLYRKKVFQVF*GCISAG Trigger: TCCTGCAGATATGCAGCCCAAGAAAACCTGGAATAC...CTTTTTCCTGTAGAGAAACGTCAAAGCTGAGAAAGATGGCTTCCCTCCCTGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS GCA 72 bp | CTGCACAGGATGTACTCCAGCACCTCGCCCGGCAGCTaGACCAGGCAGCTGGGGCCCGTCGCCTCAGCCGCG | + |
Preference number: 6 (lower is better) Translates to: LHRMYSSTSPGS*TRQLGPVASAA Trigger: CGCGGCTGAGGCGACGGGCCCCAGCTGCCTGGTGCAGCTGCCGGGCGAGGTGCTGGAGTACATCCTGTGCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS GCA 72 bp | ACCTCACCCGGAACTGCTCCTTCCACACCTGCCCGCTaGTCTGGCACACCTCGCGCAGGCGGCGGCAGGTGC | + |
Preference number: 6 (lower is better) Translates to: TSPGTAPSTPAR*SGTPRAGGGRC Trigger: GCACCTGCCGCCGCCTGCGCGAGGTGTGCCAGAGCAGCGGGCAGGTGTGGAAGGAGCAGTTCCGGGTGAGGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS GCA 72 bp | ACCTCACCCGGAACTGCTCCTTCCACACCTGCCCGCTaGTCTGGCACACCTCGCGCAGGCGGCGGCAGGTGN | + |
Preference number: 6 (lower is better) Translates to: TSPGTAPSTPAR*SGTPRAGGGRX Trigger: NCACCTGCCGCCGCCTGCGCGAGGTGTGCCAGAGCAGCGGGCAGGTGTGGAAGGAGCAGTTCCGGGTGAGGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201611.2 |
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CDS TCA 72 bp | GGCAGGTGCTGGACACGCGGCCGATGTCCAGCGCCGTaGGCGAGCCGCTGCACAGGATGTACTCCAGCACCT | + |
Preference number: 6 (lower is better) Translates to: GRCWTRGRCPAP*ASRCTGCTPAP Trigger: AGGTGCTGGAGTACATCCTGTGCAGCGGCTCGCTCACGGCGCTGGACATCGGCCGCGTGTCCAGCACCTGCC 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS CAA 90 bp | CCTTCTGCACCTTGGCACCACCGCAGCAGGAAGTGGCTTGGGAAGTaGACAGGCTCCAGGGGAACCCCCAGCTGCCGGGCGACGGTCAGG | + |
Preference number: 6 (lower is better) Translates to: PSAPWHHRSRKWLGK*TGSRGTPSCRATVR Trigger: CCTGACCGTCGCCCGGCAGCTGGGGGTTCCCCTGGAGCCTGTCAACTTCCCAAGCCACTTCCTGCTGCGGTGGTGCCAAGGTGCAGAAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS GCA 72 bp | ACCGCCCCGTGCTGCCCGGGGTCCAGGGTCTGGATGTaGTGGAGGATGTCAAGCACCTTCTCTGGCCAGATG | + |
Preference number: 6 (lower is better) Translates to: TAPCCPGSRVWM*WRMSSTFSGQM Trigger: CATCTGGCCAGAGAAGGTGCTTGACATCCTCCAGCACATCCAGACCCTGGACCCCGGGCAGCACGGGGCGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 |
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CDS CCA 72 bp | GCCCCTTCTGCACCTTGGCACCACCGCAGCAGGAAGTaGCTTGGGAAGTTGACAGGCTCCAGGGGAACCCCC | + |
Preference number: 6 (lower is better) Translates to: APSAPWHHRSRK*LGKLTGSRGTP Trigger: GGGGGTTCCCCTGGAGCCTGTCAACTTCCCAAGCCACTTCCTGCTGCGGTGGTGCCAAGGTGCAGAAGGGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS CCA 72 bp | TCCCCTTCTGCACCTTGGCACCACCGCAGCAGGAAGTaGCTTGGGAAGTTGACAGGCTCCAGGGGAACCCCC | + |
Preference number: 6 (lower is better) Translates to: SPSAPWHHRSRK*LGKLTGSRGTP Trigger: GGGGGTTCCCCTGGAGCCTGTCAACTTCCCAAGCCACTTCCTGCTGCGGTGGTGCCAAGGTGCAGAAGGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201611.2 |
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CDS GCA 72 bp | ACCGCCCCGTGCTGCCCGGGGTCCAGGGTCTGGATGTaGTGGAGGATGTCAAGCACCTTCAAGACAAGACAG | + |
Preference number: 6 (lower is better) Translates to: TAPCCPGSRVWM*WRMSSTFKTRQ Trigger: CTGTCTTGTCTTGAAGGTGCTTGACATCCTCCAGCACATCCAGACCCTGGACCCCGGGCAGCACGGGGCGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202447.4 |
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CDS TCA 72 bp | GCTGCCGGGCGACGGTCAGGTAGAGCAGAGACATGCTaGTGGGGATTCCTGTTCTGCGGGTCAACACCTGGT | + |
Preference number: 6 (lower is better) Translates to: AAGRRSGRAETC*WGFLFCGSTPG Trigger: ACCAGGTGTTGACCCGCAGAACAGGAATCCCCATCAGCATGTCTCTGCTCTACCTGACCGTCGCCCGGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS GCA 72 bp | GAGGAGCTGGTAGGACTGGTCAATGCCTTCCCCTTCTaGACCTTGGCACCACCGCAGCAGGAAGTGGCTTGG | + |
Preference number: 6 (lower is better) Translates to: EELVGLVNAFPF*TLAPPQQEVAW Trigger: CCAAGCCACTTCCTGCTGCGGTGGTGCCAAGGTGCAGAAGGGGAAGGCATTGACCAGTCCTACCAGCTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201611.2 |
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CDS CAA 72 bp | AGGCTGGGGTGGCGGCTGTTGATGCCACGGAGGGTTTaGCACACAAGCTCCACAATGCTGTGGATCTGGGCC | + |
Preference number: 6 (lower is better) Translates to: RLGWRLLMPRRV*HTSSTMLWIWA Trigger: GGCCCAGATCCACAGCATTGTGGAGCTTGTGTGCAAAACCCTCCGTGGCATCAACAGCCGCCACCCCAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS CAA 72 bp | TCACCTGCCCTGAAGGTCAGGCTGGGGTGGCGGCTGTaGATGCCACGGAGGGTTTTGCACACAAGCTCCACA | + |
Preference number: 6 (lower is better) Translates to: SPALKVRLGWRL*MPRRVLHTSST Trigger: TGTGGAGCTTGTGTGCAAAACCCTCCGTGGCATCAACAGCCGCCACCCCAGCCTGACCTTCAGGGCAGGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS CCA 72 bp | ATAGAGGACTCACCTGCCCTGAAGGTCAGGCTGGGGTaGCGGCTGTTGATGCCACGGAGGGTTTTGCACACA | + |
Preference number: 6 (lower is better) Translates to: IEDSPALKVRLG*RLLMPRRVLHT Trigger: TGTGTGCAAAACCCTCCGTGGCATCAACAGCCGCCACCCCAGCCTGACCTTCAGGGCAGGTGAGTCCTCTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS CAA 90 bp | CTGAAGGTCAGGCTGGGGTGGCGGCTGTTGATGCCACGGAGGGTTTaGCACACAAGCTCCACAATGCTGTGGATCTGGGCCTGGATGTCT | + |
Preference number: 6 (lower is better) Translates to: LKVRLGWRLLMPRRV*HTSSTMLWIWAWMS Trigger: AGACATCCAGGCCCAGATCCACAGCATTGTGGAGCTTGTGTGCAAAACCCTCCGTGGCATCAACAGCCGCCACCCCAGCCTGACCTTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS CAA 90 bp | ATAGAGGACTCACCTGCCCTGAAGGTCAGGCTGGGGTGGCGGCTGTaGATGCCACGGAGGGTTTTGCACACAAGCTCCACAATGCTGTGG | + |
Preference number: 6 (lower is better) Translates to: IEDSPALKVRLGWRL*MPRRVLHTSSTMLW Trigger: CCACAGCATTGTGGAGCTTGTGTGCAAAACCCTCCGTGGCATCAACAGCCGCCACCCCAGCCTGACCTTCAGGGCAGGTGAGTCCTCTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS TCA 72 bp | CCGGGTACATCGCCAGGTACAGGTCCAAGGAGTCTCTaGGGAGCTGGTAGGACTGGTCAATGCCTTCCCTCT | + |
Preference number: 6 (lower is better) Translates to: PGTSPGTGPRSL*GAGRTGQCLPS Trigger: AGAGGGAAGGCATTGACCAGTCCTACCAGCTCCTCAGAGACTCCTTGGACCTGTACCTGGCGATGTACCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS CAA 72 bp | CTGGTAGGACTGGTCAATGCCTTCCCCTTCTGCACCTaGGCACCACCGCAGCAGGAAGTGGCTTGGGAAGTT | + |
Preference number: 6 (lower is better) Translates to: LVGLVNAFPFCT*APPQQEVAWEV Trigger: AACTTCCCAAGCCACTTCCTGCTGCGGTGGTGCCAAGGTGCAGAAGGGGAAGGCATTGACCAGTCCTACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201611.2 |
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CDS TCA 72 bp | TCTCCAGCTCTGCATTTGGGATGTAGTGTGTGCCTGTaGACTCCGAGAAGTAGCGCCCCACATCTGGGTGCG | + |
Preference number: 6 (lower is better) Translates to: SPALHLGCSVCL*TPRSSAPHLGA Trigger: CGCACCCAGATGTGGGGCGCTACTTCTCGGAGTTCACAGGCACACACTACATCCCAAATGCAGAGCTGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS GCA 72 bp | GTAGATGTAGTCAAAGATGTCCAGGGTTGCCCCTTCTaGACCTTGGCACCACCGCAGCAGGAAGTGGCTTGG | + |
Preference number: 6 (lower is better) Translates to: VDVVKDVQGCPF*TLAPPQQEVAW Trigger: CCAAGCCACTTCCTGCTGCGGTGGTGCCAAGGTGCAGAAGGGGCAACCCTGGACATCTTTGACTACATCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS GCA 72 bp | GGTCAATGCCTTCCCTCTTGCCCAGGCTCAGCAAGTTaGCCACCATCCGCTGTAGCACCTTCTTCACATTCA | + |
Preference number: 6 (lower is better) Translates to: GQCLPSCPGSAS*PPSAVAPSSHS Trigger: TGAATGTGAAGAAGGTGCTACAGCGGATGGTGGGCAACTTGCTGAGCCTGGGCAAGAGGGAAGGCATTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS CAA 72 bp | TGGTCAATGCCTTCCCTCTTGCCCAGGCTCAGCAAGTaGCCCACCATCCGCTGTAGCACCTTCTTCACATTC | + |
Preference number: 6 (lower is better) Translates to: WSMPSLLPRLSK*PTIRCSTFFTF Trigger: GAATGTGAAGAAGGTGCTACAGCGGATGGTGGGCAACTTGCTGAGCCTGGGCAAGAGGGAAGGCATTGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS CCA 72 bp | TTGCACACAAGCTCCACAATGCTGTGGATCTGGGCCTaGATGTCTCTGAAGCTGATGTCGGAGAGTGGGTTG | + |
Preference number: 6 (lower is better) Translates to: LHTSSTMLWIWA*MSLKLMSESGL Trigger: CAACCCACTCTCCGACATCAGCTTCAGAGACATCCAGGCCCAGATCCACAGCATTGTGGAGCTTGTGTGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS CCA 72 bp | TGTAGCCGTACCTCTTATGCTTCATCACAAGCCCGATaGAGTAGCAGACATCCCTGTGCTTCTCCTCGGAGC | + |
Preference number: 6 (lower is better) Translates to: CSRTSYASSQAR*SSRHPCASPRS Trigger: GCTCCGAGGAGAAGCACAGGGATGTCTGCTACTCCATCGGGCTTGTGATGAAGCATAAGAGGTACGGCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS GCA 72 bp | CCACGTTGTATTCCAGGTTTTCTTGGGCTGCATATCTaGAGGAGCCATCCTCCACCAGGACGTTGTAGAAGG | + |
Preference number: 6 (lower is better) Translates to: PRCIPGFLGLHI*RSHPPPGRCRR Trigger: CCTTCTACAACGTCCTGGTGGAGGATGGCTCCTGCAGATATGCAGCCCAAGAAAACCTGGAATACAACGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS CCA 72 bp | AGCCATTACAGGGGACGTGCTCTGAAAAGAACCGCTTaGAGAAGGAAGCTACAATCTTCCGGGCTTCTAACC | + |
Preference number: 6 (lower is better) Translates to: SHYRGRALKRTA*RRKLQSSGLLT Trigger: GGTTAGAAGCCCGGAAGATTGTAGCTTCCTTCTCCAAGCGGTTCTTTTCAGAGCACGTCCCCTGTAATGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS TCA 72 bp | CAGCTTTCTGCCGAACTTTATATTCCTCTAACCAATTaGCGTAGTCGGTGGGGCTGTAGTGCTTCATCAGGG | + |
Preference number: 6 (lower is better) Translates to: QLSAELYIPLTN*RSRWGCSASSG Trigger: CCCTGATGAAGCACTACAGCCCCACCGACTACGTCAATTGGTTAGAGGAATATAAAGTTCGGCAGAAAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS CAA 90 bp | GAACTTCAGCTGGTCATACAGGACATAGTTGATAGCGTCCAGCACTaGGCTCTGAAGTTCTATCTCCATTATCATAGAGGACTCACCTGC | + |
Preference number: 6 (lower is better) Translates to: ELQLVIQDIVDSVQH*ALKFYLHYHRGLTC Trigger: GCAGGTGAGTCCTCTATGATAATGGAGATAGAACTTCAGAGCCAAGTGCTGGACGCTATCAACTATGTCCTGTATGACCAGCTGAAGTTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS GCA 72 bp | CAATCAGGTACTCACACTCTTTCACTGTCAGCTGCTTaGCCTTCCCAAAAGCATCTATGTAGATGTAGTCAA | + |
Preference number: 6 (lower is better) Translates to: QSGTHTLSLSAA*PSQKHLCRCSQ Trigger: TTGACTACATCTACATAGATGCTTTTGGGAAGGGCAAGCAGCTGACAGTGAAAGAGTGTGAGTACCTGATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035579.10 ENSMUST00000202447.4 |
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CDS CAA 72 bp | CTGGTCATACAGGACATAGTTGATAGCGTCCAGCACTaGGCTCTGAAGTTCTATCTCCATTATCATAGAGGA | + |
Preference number: 6 (lower is better) Translates to: LVIQDIVDSVQH*ALKFYLHYHRG Trigger: TCCTCTATGATAATGGAGATAGAACTTCAGAGCCAAGTGCTGGACGCTATCAACTATGTCCTGTATGACCAG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS GCA 72 bp | GATTTTCTGCTGCCGCAGGTAGTAGAGAATTTTCTTTaGGTAGTATTTCCAGGTCAAAGCTTTCCTTCCTTC | + |
Preference number: 6 (lower is better) Translates to: DFLLPQVVENFL*VVFPGQSFPSF Trigger: GAAGGAAGGAAAGCTTTGACCTGGAAATACTACGCAAAGAAAATTCTCTACTACCTGCGGCAGCAGAAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |
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CDS CAA 72 bp | GGATTTTCTGCTGCCGCAGGTAGTAGAGAATTTTCTTaGCGTAGTATTTCCAGGTCAAAGCTTTCCTTCCTT | + |
Preference number: 6 (lower is better) Translates to: GFSAAAGSREFS*RSISRSKLSFL Trigger: AAGGAAGGAAAGCTTTGACCTGGAAATACTACGCAAAGAAAATTCTCTACTACCTGCGGCAGCAGAAAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035579.10 ENSMUST00000201611.2 ENSMUST00000202447.4 |