Pregenerated sensors for FBXO17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030598Ensembl transcript IDs: ENSMUST00000032818.13, ENSMUST00000108278.9, ENSMUST00000108279.9, ENSMUST00000167118.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GAACAAGCTGGCAGTCCCTGGTTTGTCACAGCAGGAGGGACACACAGGGTCTCCCAGATACCCATCAGCTaGGGACTGCAAAGTCACCTT | + |
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Preference number: 2 (lower is better) Translates to: EQAGSPWFVTAGGTHRVSQIPIS*GLQSHL Trigger: AAGGTGACTTTGCAGTCCCCAGCTGATGGGTATCTG...GGAGACCCTGTGTGTCCCTCCTGCTGTGACAAACCAGGGACTGCCAGCTTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032818.13 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTGGCCTTGAAGTCAGTATACAGCTGGGGATGACCTTGAACTCCAGATCCCAAGCTGGCAGTCCCTaGTTTGTCACAGCAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: QAGLEVSIQLGMTLNSRSQAGSP*FVTAGG Trigger: CCCTCCTGCTGTGACAAACCAGGGACTGCCAGCTTG...GGATCTGGAGTTCAAGGTCATCCCCAGCTGTATACTGACTTCAAGGCCAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032818.13 |
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| 3UTR-3UTR GCA 90 bp | GTAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACTCTGGGGGACCAGAAGTGTGTaGTCTCAGGTCTGGCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: VDGCEPPCGCWELNSGLWGTRSV*SQVWLG Trigger: GCCAAGCCAGACCTGAGAGCACACACTTCTGGTCCC...CCAGAGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| 3UTR-3UTR CCA 90 bp | GTAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACTCTGGGAAGGCAGTGTGTCCTaGAAGTCCCAATCAGACTGG | + |
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Preference number: 2 (lower is better) Translates to: VDGCEPPCGCWELNSGLWEGSVS*KSQSDW Trigger: CCAGTCTGATTGGGACTTCCAGGACACACTGCCTTC...CCAGAGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 |
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| 3UTR-3UTR TCA 90 bp | CAGAAGAGGGCATCAGATCACATTGTAGATGGTTGTGAGCCACCATGTGGTTGCCTCCTCCGTTTACCTTaGTGTGGGGACCAGAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: QKRASDHIVDGCEPPCGCLLRLP*CGDQKC Trigger: ACACTTCTGGTCCCCACATCAAGGTAAACGGAGGAG...GCAACCACATGGTGGCTCACAACCATCTACAATGTGATCTGATGCCCTCTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| 3UTR-3UTR CCA 90 bp | CCATGTGGTTGCTGGGAATTGAACTCAGGACTCTGGAAGAGCAGTCAGTGCTCTCCGTTTACCTTGATGTaGGGACCAGAAGTGTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: PCGCWELNSGLWKSSQCSPFTLM*GPEVCA Trigger: AGCACACACTTCTGGTCCCCACATCAAGGTAAACGG...AGAGCACTGACTGCTCTTCCAGAGTCCTGAGTTCAATTCCCAGCAACCACATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| 3UTR-3UTR GCA 90 bp | TGCTATCTTCAGTCACTCCAGAAGAGGGCATCAGATCACATTGTAGATGGTTGTGGGACCAGAAGTGTGTaGTCTCAGGTCTGGCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: CYLQSLQKRASDHIVDGCGTRSV*SQVWLG Trigger: GCCAAGCCAGACCTGAGAGCACACACTTCTGGTCCC...ACAACCATCTACAATGTGATCTGATGCCCTCTTCTGGAGTGACTGAAGATAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| 3UTR CAA 90 bp | CATAGCAACCTAGAGATGTCTGCATCACATCATGGTAGTCCCTGCTaGAGAGACAGAAGCTATGAACAAGCTGGCAGTCCCTGGTTTGTC | + |
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Preference number: 2 (lower is better) Translates to: HSNLEMSASHHGSPC*RDRSYEQAGSPWFV Trigger: GACAAACCAGGGACTGCCAGCTTGTTCATAGCTTCTGTCTCTCAAGCAGGGACTACCATGATGTGATGCAGACATCTCTAGGTTGCTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032818.13 |
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| 3UTR-3UTR CCA 90 bp | TTTGAGTATACTGTTGCTATCTTCAGTCACTCCAGAAGAGGGCATCAGATCACAGTGTGCTCTCAGGTCTaGCTTGGCCTCCACACATGG | + |
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Preference number: 2 (lower is better) Translates to: FEYTVAIFSHSRRGHQITVCSQV*LGLHTW Trigger: CCATGTGTGGAGGCCAAGCCAGACCTGAGAGCACAC...TGTGATCTGATGCCCTCTTCTGGAGTGACTGAAGATAGCAACAGTATACTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| 3UTR-3UTR TCA 90 bp | GTCTTTGAGTATACTGTTGCTATCTTCAGTCACTCCAGAAGAGGGCATCAGATCCTCCTCCGTTTACCTTaGTGTGGGGACCAGAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: VFEYTVAIFSHSRRGHQILLRLP*CGDQKC Trigger: ACACTTCTGGTCCCCACATCAAGGTAAACGGAGGAG...GATCTGATGCCCTCTTCTGGAGTGACTGAAGATAGCAACAGTATACTCAAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| 3UTR-3UTR TCA 90 bp | TTTGAGTATACTGTTGCTATCTTCAGTCACTCCAGAAGAGGGCATCAGATCACAAGCTCAGGCTGGCCTTaGAGTCAGTATACAGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: FEYTVAIFSHSRRGHQITSSGWP*SQYTAG Trigger: CCCAGCTGTATACTGACTTCAAGGCCAGCCTGAGCT...TGTGATCTGATGCCCTCTTCTGGAGTGACTGAAGATAGCAACAGTATACTCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| 3UTR-3UTR CCA 90 bp | AGTATACTGTTGCTATCTTCAGTCACTCCAGAAGAGGGCATCAGATCACATTGTGAAGGCAGTGTGTCCTaGAAGTCCCAATCAGACTGG | + |
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Preference number: 2 (lower is better) Translates to: SILLLSSVTPEEGIRSHCEGSVS*KSQSDW Trigger: CCAGTCTGATTGGGACTTCCAGGACACACTGCCTTC...ACAATGTGATCTGATGCCCTCTTCTGGAGTGACTGAAGATAGCAACAGTATACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 |
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| 3UTR CAA 90 bp | TTTTGTTATGATCCCAAGCTTGGTCTATTGGATATTCTCTCTTTTTaGACAGGGCCTCATGTAGCTCAGGCTGGCCTTGAAGTCAGTATA | + |
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Preference number: 2 (lower is better) Translates to: FCYDPKLGLLDILSF*TGPHVAQAGLEVSI Trigger: TATACTGACTTCAAGGCCAGCCTGAGCTACATGAGGCCCTGTCAAAAAAGAGAGAATATCCAATAGACCAAGCTTGGGATCATAACAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| 3UTR CCA 72 bp | CTTGATGTGGGGACCAGAAGTGTGTGCTCTCAGGTCTaGCTTGGCCTCCACACATGGAGTAGTCCTCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: LDVGTRSVCSQV*LGLHTWSSPQA Trigger: TGCCTGAGGACTACTCCATGTGTGGAGGCCAAGCCAGACCTGAGAGCACACACTTCTGGTCCCCACATCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| 3UTR GCA 72 bp | TCCTCCGTTTACCTTGATGTGGGGACCAGAAGTGTGTaGTCTCAGGTCTGGCTTGGCCTCCACACATGGAGT | + |
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Preference number: 3 (lower is better) Translates to: SSVYLDVGTRSV*SQVWLGLHTWS Trigger: ACTCCATGTGTGGAGGCCAAGCCAGACCTGAGAGCACACACTTCTGGTCCCCACATCAAGGTAAACGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| 3UTR CCA 72 bp | TTGAGAGACAGAAGCTATGAACAAGCTGGCAGTCCCTaGTTTGTCACAGCAGGAGGGACACACAGGGTCTCC | + |
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Preference number: 3 (lower is better) Translates to: LRDRSYEQAGSP*FVTAGGTHRVS Trigger: GGAGACCCTGTGTGTCCCTCCTGCTGTGACAAACCAGGGACTGCCAGCTTGTTCATAGCTTCTGTCTCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032818.13 |
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| 3UTR-3UTR CAA 90 bp | CAGAAGAGGGCATCAGATCACATTGTAGATGGTTGTGAGCCACCATGTGGTTGCCATGGTAGTCCCTGCTaGAGAGACAGAAGCTATGAA | + |
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Preference number: 3 (lower is better) Translates to: QKRASDHIVDGCEPPCGCHGSPC*RDRSYE Trigger: TTCATAGCTTCTGTCTCTCAAGCAGGGACTACCATG...GCAACCACATGGTGGCTCACAACCATCTACAATGTGATCTGATGCCCTCTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032818.13 |
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| 3UTR-3UTR CAA 90 bp | GTAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACTCTGGGATATTCTCTCTTTTTaGACAGGGCCTCATGTAGCT | + |
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Preference number: 3 (lower is better) Translates to: VDGCEPPCGCWELNSGLWDILSF*TGPHVA Trigger: AGCTACATGAGGCCCTGTCAAAAAAGAGAGAATATC...CCAGAGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| 3UTR-3UTR CAA 90 bp | TGCTATCTTCAGTCACTCCAGAAGAGGGCATCAGATCACATTGTAGATGGTTGTTGTGGTTGCTGGGAATaGAACTCAGGACTCTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: CYLQSLQKRASDHIVDGCCGCWE*NSGLWK Trigger: CTTCCAGAGTCCTGAGTTCAATTCCCAGCAACCACA...ACAACCATCTACAATGTGATCTGATGCCCTCTTCTGGAGTGACTGAAGATAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| 3UTR GCA 72 bp | AACCTAGAGATGTCTGCATCACATCATGGTAGTCCCTaGTTGAGAGACAGAAGCTATGAACAAGCTGGCAGT | + |
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Preference number: 3 (lower is better) Translates to: NLEMSASHHGSP*LRDRSYEQAGS Trigger: ACTGCCAGCTTGTTCATAGCTTCTGTCTCTCAAGCAGGGACTACCATGATGTGATGCAGACATCTCTAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032818.13 |
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| 3UTR-3UTR CAA 90 bp | GTCTTTGAGTATACTGTTGCTATCTTCAGTCACTCCAGAAGAGGGCATCAGATCACTGCAAAGTCACCTTaGGTTTTAACACCATCCGGG | + |
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Preference number: 3 (lower is better) Translates to: VFEYTVAIFSHSRRGHQITAKSP*VLTPSG Trigger: CCCGGATGGTGTTAAAACCAAAGGTGACTTTGCAGT...GATCTGATGCCCTCTTCTGGAGTGACTGAAGATAGCAACAGTATACTCAAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032818.13 |
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| 3UTR TCA 72 bp | CACTGTCTTCTTATAAGTAGCTTTCTCCTTTTGTTATaGTCCCAAGCTTGGTCTATTGGATATTCTCTCTTT | + |
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Preference number: 3 (lower is better) Translates to: HCLLISSFLLLL*SQAWSIGYSLF Trigger: AAAGAGAGAATATCCAATAGACCAAGCTTGGGATCATAACAAAAGGAGAAAGCTACTTATAAGAAGACAGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| CDS-3UTR CCA 90 bp | CAGGCTGGCCTTGAAGTCAGTATACAGCTGGGGATGACCTTGAACTCCAGATCCGCGCGAGGCGGCACGTaGCTCAGCACCTGCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: QAGLEVSIQLGMTLNSRSARGGT*LSTCTS Trigger: GCTGGTGCAGGTGCTGAGCCACGTGCCGCCTCGCGC...GGATCTGGAGTTCAAGGTCATCCCCAGCTGTATACTGACTTCAAGGCCAGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| CDS-3UTR TCA 90 bp | GAACAAGCTGGCAGTCCCTGGTTTGTCACAGCAGGAGGGACACACAGGGTCTCCCTCCTCTCAGTCCACTaGAGGACTGGGTTGGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: EQAGSPWFVTAGGTHRVSLLSVH*RTGLGE Trigger: CTCACCCAACCCAGTCCTTCAGTGGACTGAGAGGAG...GGAGACCCTGTGTGTCCCTCCTGCTGTGACAAACCAGGGACTGCCAGCTTGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032818.13 |
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| CDS-3UTR TCA 90 bp | AGGACTCTGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCAGGACAGACGGATCCTaGCCCGCACACTGGAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: RTLEEQSVLLTAEPSLQPRTDGS*PAHWSE Trigger: CTCACTCCAGTGTGCGGGTCAGGATCCGTCTGTCCT...GGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCAGAGTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 |
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| CDS-3UTR CCA 90 bp | CAGAAGAGGGCATCAGATCACATTGTAGATGGTTGTGAGCCACCATGTGGTTGCGCGCGAGGCGGCACGTaGCTCAGCACCTGCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: QKRASDHIVDGCEPPCGCARGGT*LSTCTS Trigger: GCTGGTGCAGGTGCTGAGCCACGTGCCGCCTCGCGC...GCAACCACATGGTGGCTCACAACCATCTACAATGTGATCTGATGCCCTCTTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| CDS-3UTR GCA 90 bp | AGGACTCTGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCCGGTCGCGAGCCAGTTaGAGCAGCCATATACTTGGG | + |
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Preference number: 4 (lower is better) Translates to: RTLEEQSVLLTAEPSLQPRSRAS*SSHILG Trigger: CCCAAGTATATGGCTGCTGCAACTGGCTCGCGACCG...GGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCAGAGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| CDS-3UTR CCA 90 bp | AGAGACAGAAGCTATGAACAAGCTGGCAGTCCCTGGTTTGTCACAGCAGGAGGGAATGGGAACTCGTCGTaGCGGTTGCCGTCGGCGTCG | + |
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Preference number: 4 (lower is better) Translates to: RDRSYEQAGSPWFVTAGGNGNSS*RLPSAS Trigger: CGACGCCGACGGCAACCGCCACGACGAGTTCCCATT...CCCTCCTGCTGTGACAAACCAGGGACTGCCAGCTTGTTCATAGCTTCTGTCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032818.13 |
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| CDS-3UTR CCA 90 bp | AGGACTCTGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCGTCACAAAGCAGGTCTaGGAAGGAGCCCCTGGTACC | + |
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Preference number: 4 (lower is better) Translates to: RTLEEQSVLLTAEPSLQPVTKQV*EGAPGT Trigger: GGTACCAGGGGCTCCTTCCCAGACCTGCTTTGTGAC...GGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCAGAGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| CDS-3UTR GCA 90 bp | CTGTTGCTATCTTCAGTCACTCCAGAAGAGGGCATCAGATCACATTGTAGATGGAGGCGTAGAGGGCTCTaGCCTCCGCGCTGCGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: LLLSSVTPEEGIRSHCRWRRRGL*PPRCGR Trigger: GCGACCGCAGCGCGGAGGGCAGAGCCCTCTACGCCT...CCATCTACAATGTGATCTGATGCCCTCTTCTGGAGTGACTGAAGATAGCAACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| CDS-3UTR CCA 90 bp | CTGTTGCTATCTTCAGTCACTCCAGAAGAGGGCATCAGATCACATTGTAGATGGGCGCGAGGCGGCACGTaGCTCAGCACCTGCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: LLLSSVTPEEGIRSHCRWARGGT*LSTCTS Trigger: GCTGGTGCAGGTGCTGAGCCACGTGCCGCCTCGCGC...CCATCTACAATGTGATCTGATGCCCTCTTCTGGAGTGACTGAAGATAGCAACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| CDS-3UTR GCA 90 bp | TTTGAGTATACTGTTGCTATCTTCAGTCACTCCAGAAGAGGGCATCAGATCACAAGGCGTAGAGGGCTCTaGCCTCCGCGCTGCGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: FEYTVAIFSHSRRGHQITRRRGL*PPRCGR Trigger: GCGACCGCAGCGCGGAGGGCAGAGCCCTCTACGCCT...TGTGATCTGATGCCCTCTTCTGGAGTGACTGAAGATAGCAACAGTATACTCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| CDS-3UTR CCA 90 bp | CATGGAGTAGTCCTCAGGCATAGCAACCTAGAGATGTCTGCATCACATCATGGTAATGGGAACTCGTCGTaGCGGTTGCCGTCGGCGTCG | + |
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Preference number: 4 (lower is better) Translates to: HGVVLRHSNLEMSASHHGNGNSS*RLPSAS Trigger: CGACGCCGACGGCAACCGCCACGACGAGTTCCCATT...ACCATGATGTGATGCAGACATCTCTAGGTTGCTATGCCTGAGGACTACTCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 |
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| CDS-3UTR CCA 90 bp | CAGGCTGGCCTTGAAGTCAGTATACAGCTGGGGATGACCTTGAACTCCAGATCCTCTCCGCAGGAGTTGTaGATGAGGTTGCGGCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: QAGLEVSIQLGMTLNSRSSPQEL*MRLRPN Trigger: GTTTGGCCGCAACCTCATCCACAACTCCTGCGGAGA...GGATCTGGAGTTCAAGGTCATCCCCAGCTGTATACTGACTTCAAGGCCAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| CDS-3UTR CCA 90 bp | AGGACTCTGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCATGCAGATCTCAATCTaGCCACTGTCCAACAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RTLEEQSVLLTAEPSLQPMQISI*PLSNSS Trigger: GGAGCTGTTGGACAGTGGCCAGATTGAGATCTGCAT...GGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCAGAGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| CDS-3UTR GCA 90 bp | GCTCAGGCTGGCCTTGAAGTCAGTATACAGCTGGGGATGACCTTGAACTCCAGAACCAGGTCTACAAGCTaGCTCTTGGAGCACCACTCA | + |
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Preference number: 4 (lower is better) Translates to: AQAGLEVSIQLGMTLNSRTRSTS*LLEHHS Trigger: TGAGTGGTGCTCCAAGAGGCAGCTTGTAGACCTGGT...TCTGGAGTTCAAGGTCATCCCCAGCTGTATACTGACTTCAAGGCCAGCCTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| CDS-3UTR GCA 90 bp | CAGGCTGGCCTTGAAGTCAGTATACAGCTGGGGATGACCTTGAACTCCAGATCCACCAGGTCTACAAGCTaGCTCTTGGAGCACCACTCA | + |
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Preference number: 4 (lower is better) Translates to: QAGLEVSIQLGMTLNSRSTRSTS*LLEHHS Trigger: TGAGTGGTGCTCCAAGAGGCAGCTTGTAGACCTGGT...GGATCTGGAGTTCAAGGTCATCCCCAGCTGTATACTGACTTCAAGGCCAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| CDS-3UTR CCA 90 bp | AGGGCATCAGATCACATTGTAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAAGTCACAAAGCAGGTCTaGGAAGGAGCCCCTGGTACC | + |
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Preference number: 4 (lower is better) Translates to: RASDHIVDGCEPPCGCWEVTKQV*EGAPGT Trigger: GGTACCAGGGGCTCCTTCCCAGACCTGCTTTGTGAC...TTCCCAGCAACCACATGGTGGCTCACAACCATCTACAATGTGATCTGATGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| 3UTR CAA 72 bp | CCAGATACCCATCAGCTGGGGACTGCAAAGTCACCTTaGGTTTTAACACCATCCGGGAGAAGGCAGTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: PDTHQLGTAKSP*VLTPSGRRQCV Trigger: GACACACTGCCTTCTCCCGGATGGTGTTAAAACCAAAGGTGACTTTGCAGTCCCCAGCTGATGGGTATCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032818.13 |
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| 3UTR CAA 72 bp | GAGACAGAAGCTATGAACAAGCTGGCAGTCCCTGGTTaGTCACAGCAGGAGGGACACACAGGGTCTCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: ETEAMNKLAVPG*SQQEGHTGSPF Trigger: AAAAGGAGACCCTGTGTGTCCCTCCTGCTGTGACAAACCAGGGACTGCCAGCTTGTTCATAGCTTCTGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032818.13 |
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| CDS-3UTR GCA 90 bp | CATGGAGTAGTCCTCAGGCATAGCAACCTAGAGATGTCTGCATCACATCATGGTCGGTCGCGAGCCAGTTaGAGCAGCCATATACTTGGG | + |
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Preference number: 4 (lower is better) Translates to: HGVVLRHSNLEMSASHHGRSRAS*SSHILG Trigger: CCCAAGTATATGGCTGCTGCAACTGGCTCGCGACCG...ACCATGATGTGATGCAGACATCTCTAGGTTGCTATGCCTGAGGACTACTCCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 |
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| CDS-3UTR CCA 90 bp | AGGGCATCAGATCACATTGTAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATCTCCGCAGGAGTTGTaGATGAGGTTGCGGCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: RASDHIVDGCEPPCGCWESPQEL*MRLRPN Trigger: GTTTGGCCGCAACCTCATCCACAACTCCTGCGGAGA...TTCCCAGCAACCACATGGTGGCTCACAACCATCTACAATGTGATCTGATGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| 3UTR CAA 72 bp | GCTGGCCTTGAAGTCAGTATACAGCTGGGGATGACCTaGAACTCCAGATCCTCCTCCGTTTACCTTGATGTG | + |
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Preference number: 4 (lower is better) Translates to: AGLEVSIQLGMT*NSRSSSVYLDV Trigger: CACATCAAGGTAAACGGAGGAGGATCTGGAGTTCAAGGTCATCCCCAGCTGTATACTGACTTCAAGGCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| CDS-3UTR TCA 90 bp | CTGTTGCTATCTTCAGTCACTCCAGAAGAGGGCATCAGATCACATTGTAGATGGAAGGACTGGGTTGGGTaGGGCAGAGAACTTGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLSSVTPEEGIRSHCRWKDWVG*GRELDH Trigger: GTGGTCAAGTTCTCTGCCTCACCCAACCCAGTCCTT...CCATCTACAATGTGATCTGATGCCCTCTTCTGGAGTGACTGAAGATAGCAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
||
| CDS-3UTR TCA 90 bp | TGTTGCTATCTTCAGTCACTCCAGAAGAGGGCATCAGATCACATTGTAGATGGTCTCCTCTCAGTCCACTaGAGGACTGGGTTGGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CCYLQSLQKRASDHIVDGLLSVH*RTGLGE Trigger: CTCACCCAACCCAGTCCTTCAGTGGACTGAGAGGAG...ACCATCTACAATGTGATCTGATGCCCTCTTCTGGAGTGACTGAAGATAGCAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
||
| CDS-3UTR GCA 90 bp | GAGTATACTGTTGCTATCTTCAGTCACTCCAGAAGAGGGCATCAGATCACATTGCGGTCGCGAGCCAGTTaGAGCAGCCATATACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EYTVAIFSHSRRGHQITLRSRAS*SSHILG Trigger: CCCAAGTATATGGCTGCTGCAACTGGCTCGCGACCG...CAATGTGATCTGATGCCCTCTTCTGGAGTGACTGAAGATAGCAACAGTATACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
||
| CDS-3UTR CCA 90 bp | TGGTTGCTGGGAATTGAACTCAGGACTCTGGAAGAGCAGTCAGTGCTCTTAACCATGCAGATCTCAATCTaGCCACTGTCCAACAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WLLGIELRTLEEQSVLLTMQISI*PLSNSS Trigger: GGAGCTGTTGGACAGTGGCCAGATTGAGATCTGCAT...GGTTAAGAGCACTGACTGCTCTTCCAGAGTCCTGAGTTCAATTCCCAGCAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
||
| 3UTR CAA 72 bp | CTAGAGATGTCTGCATCACATCATGGTAGTCCCTGCTaGAGAGACAGAAGCTATGAACAAGCTGGCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LEMSASHHGSPC*RDRSYEQAGSP Trigger: GGGACTGCCAGCTTGTTCATAGCTTCTGTCTCTCAAGCAGGGACTACCATGATGTGATGCAGACATCTCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032818.13 |
||
| CDS-3UTR TCA 90 bp | TGTTGCTATCTTCAGTCACTCCAGAAGAGGGCATCAGATCACATTGTAGATGGTAAGGACTGGGTTGGGTaGGGCAGAGAACTTGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: CCYLQSLQKRASDHIVDGKDWVG*GRELDH Trigger: GTGGTCAAGTTCTCTGCCTCACCCAACCCAGTCCTT...ACCATCTACAATGTGATCTGATGCCCTCTTCTGGAGTGACTGAAGATAGCAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
||
| CDS-3UTR GCA 90 bp | AGGGCATCAGATCACATTGTAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAAGTGTCTCTCCCATACTaGTCAAAAGACACATACCGG | + |
|
Preference number: 4 (lower is better) Translates to: RASDHIVDGCEPPCGCWEVSLPY*SKDTYR Trigger: CCGGTATGTGTCTTTTGAGCAGTATGGGAGAGACAC...TTCCCAGCAACCACATGGTGGCTCACAACCATCTACAATGTGATCTGATGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 |
||
| CDS-3UTR CCA 90 bp | ATGTCTTTGAGTATACTGTTGCTATCTTCAGTCACTCCAGAAGAGGGCATCAGAGTCACAAAGCAGGTCTaGGAAGGAGCCCCTGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: MSLSILLLSSVTPEEGIRVTKQV*EGAPGT Trigger: GGTACCAGGGGCTCCTTCCCAGACCTGCTTTGTGAC...TCTGATGCCCTCTTCTGGAGTGACTGAAGATAGCAACAGTATACTCAAAGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
||
| CDS-3UTR CCA 90 bp | AGGGCATCAGATCACATTGTAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAACTACAAGCTGCCTCTTaGAGCACCACTCAAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RASDHIVDGCEPPCGCWELQAAS*STTQKK Trigger: CTTCTTTTGAGTGGTGCTCCAAGAGGCAGCTTGTAG...TTCCCAGCAACCACATGGTGGCTCACAACCATCTACAATGTGATCTGATGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
||
| CDS-3UTR TCA 90 bp | GTAGCTTTCTCCTTTTGTTATGATCCCAAGCTTGGTCTATTGGATATTCTCTCTAGGACAGACGGATCCTaGCCCGCACACTGGAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VAFSFCYDPKLGLLDILSRTDGS*PAHWSE Trigger: CTCACTCCAGTGTGCGGGTCAGGATCCGTCTGTCCT...AGAGAGAATATCCAATAGACCAAGCTTGGGATCATAACAAAAGGAGAAAGCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 |
||
| CDS-3UTR GCA 90 bp | GAGTATACTGTTGCTATCTTCAGTCACTCCAGAAGAGGGCATCAGATCACATTGACCAGGTCTACAAGCTaGCTCTTGGAGCACCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: EYTVAIFSHSRRGHQITLTRSTS*LLEHHS Trigger: TGAGTGGTGCTCCAAGAGGCAGCTTGTAGACCTGGT...CAATGTGATCTGATGCCCTCTTCTGGAGTGACTGAAGATAGCAACAGTATACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
||
| CDS-3UTR GCA 90 bp | TGTTGCTATCTTCAGTCACTCCAGAAGAGGGCATCAGATCACATTGTAGATGGTCCCACCAGTCAGCTATaGAGATCTCAATCTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CCYLQSLQKRASDHIVDGPTSQL*RSQSGH Trigger: GTGGCCAGATTGAGATCTGCATAGCTGACTGGTGGG...ACCATCTACAATGTGATCTGATGCCCTCTTCTGGAGTGACTGAAGATAGCAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
||
| CDS-3UTR GCA 90 bp | GAGTATACTGTTGCTATCTTCAGTCACTCCAGAAGAGGGCATCAGATCACATTGCCCACCAGTCAGCTATaGAGATCTCAATCTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EYTVAIFSHSRRGHQITLPTSQL*RSQSGH Trigger: GTGGCCAGATTGAGATCTGCATAGCTGACTGGTGGG...CAATGTGATCTGATGCCCTCTTCTGGAGTGACTGAAGATAGCAACAGTATACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
||
| CDS-3UTR TCA 90 bp | CAGAAGAGGGCATCAGATCACATTGTAGATGGTTGTGAGCCACCATGTGGTTGCGTGAGGCAGAGAACTTaGCCACTTCGTTTTCATATT | + |
|
Preference number: 4 (lower is better) Translates to: QKRASDHIVDGCEPPCGCVRQRT*PLRFHI Trigger: AATATGAAAACGAAGTGGTCAAGTTCTCTGCCTCAC...GCAACCACATGGTGGCTCACAACCATCTACAATGTGATCTGATGCCCTCTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
||
| CDS-3UTR GCA 90 bp | AGTATACTGTTGCTATCTTCAGTCACTCCAGAAGAGGGCATCAGATCACATTGTCCCACCAGTCAGCTATaGAGATCTCAATCTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SILLLSSVTPEEGIRSHCPTSQL*RSQSGH Trigger: GTGGCCAGATTGAGATCTGCATAGCTGACTGGTGGG...ACAATGTGATCTGATGCCCTCTTCTGGAGTGACTGAAGATAGCAACAGTATACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
||
| CDS-3UTR CCA 90 bp | GTAGCTTTCTCCTTTTGTTATGATCCCAAGCTTGGTCTATTGGATATTCTCTCTTCTCCGCAGGAGTTGTaGATGAGGTTGCGGCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VAFSFCYDPKLGLLDILSSPQEL*MRLRPN Trigger: GTTTGGCCGCAACCTCATCCACAACTCCTGCGGAGA...AGAGAGAATATCCAATAGACCAAGCTTGGGATCATAACAAAAGGAGAAAGCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
||
| CDS-3UTR CCA 90 bp | TGCTATCTTCAGTCACTCCAGAAGAGGGCATCAGATCACATTGTAGATGGTTGTCTACAAGCTGCCTCTTaGAGCACCACTCAAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CYLQSLQKRASDHIVDGCLQAAS*STTQKK Trigger: CTTCTTTTGAGTGGTGCTCCAAGAGGCAGCTTGTAG...ACAACCATCTACAATGTGATCTGATGCCCTCTTCTGGAGTGACTGAAGATAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
||
| CDS-3UTR TCA 90 bp | CTGTTGCTATCTTCAGTCACTCCAGAAGAGGGCATCAGATCACATTGTAGATGGGTGAGGCAGAGAACTTaGCCACTTCGTTTTCATATT | + |
|
Preference number: 4 (lower is better) Translates to: LLLSSVTPEEGIRSHCRWVRQRT*PLRFHI Trigger: AATATGAAAACGAAGTGGTCAAGTTCTCTGCCTCAC...CCATCTACAATGTGATCTGATGCCCTCTTCTGGAGTGACTGAAGATAGCAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
||
| CDS-3UTR TCA 90 bp | CTTTCTCCTTTTGTTATGATCCCAAGCTTGGTCTATTGGATATTCTCTCTTTTTCTCCTCTCAGTCCACTaGAGGACTGGGTTGGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSPFVMIPSLVYWIFSLFLLSVH*RTGLGE Trigger: CTCACCCAACCCAGTCCTTCAGTGGACTGAGAGGAG...AAAAAGAGAGAATATCCAATAGACCAAGCTTGGGATCATAACAAAAGGAGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
||
| CDS-3UTR CCA 90 bp | ATGTCTTTGAGTATACTGTTGCTATCTTCAGTCACTCCAGAAGAGGGCATCAGACTACAAGCTGCCTCTTaGAGCACCACTCAAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: MSLSILLLSSVTPEEGIRLQAAS*STTQKK Trigger: CTTCTTTTGAGTGGTGCTCCAAGAGGCAGCTTGTAG...TCTGATGCCCTCTTCTGGAGTGACTGAAGATAGCAACAGTATACTCAAAGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
||
| CDS-3UTR TCA 90 bp | TGCTATCTTCAGTCACTCCAGAAGAGGGCATCAGATCACATTGTAGATGGTTGTGTGAGGCAGAGAACTTaGCCACTTCGTTTTCATATT | + |
|
Preference number: 4 (lower is better) Translates to: CYLQSLQKRASDHIVDGCVRQRT*PLRFHI Trigger: AATATGAAAACGAAGTGGTCAAGTTCTCTGCCTCAC...ACAACCATCTACAATGTGATCTGATGCCCTCTTCTGGAGTGACTGAAGATAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
||
| CDS-3UTR CCA 90 bp | GTAGCTTTCTCCTTTTGTTATGATCCCAAGCTTGGTCTATTGGATATTCTCTCTATGCAGATCTCAATCTaGCCACTGTCCAACAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VAFSFCYDPKLGLLDILSMQISI*PLSNSS Trigger: GGAGCTGTTGGACAGTGGCCAGATTGAGATCTGCAT...AGAGAGAATATCCAATAGACCAAGCTTGGGATCATAACAAAAGGAGAAAGCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| CDS-3UTR GCA 90 bp | CTTTCTCCTTTTGTTATGATCCCAAGCTTGGTCTATTGGATATTCTCTCTTTTTGTGTCTCTCCCATACTaGTCAAAAGACACATACCGG | + |
|
Preference number: 4 (lower is better) Translates to: LSPFVMIPSLVYWIFSLFVSLPY*SKDTYR Trigger: CCGGTATGTGTCTTTTGAGCAGTATGGGAGAGACAC...AAAAAGAGAGAATATCCAATAGACCAAGCTTGGGATCATAACAAAAGGAGAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 |
||
| 3UTR CAA 72 bp | GATGTATTTATTTATCGTATGTCTTTGAGTATACTGTaGCTATCTTCAGTCACTCCAGAAGAGGGCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DVFIYRMSLSIL*LSSVTPEEGIR Trigger: TCTGATGCCCTCTTCTGGAGTGACTGAAGATAGCAACAGTATACTCAAAGACATACGATAAATAAATACATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
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| CDS GCA 90 bp | CGTCGGCGTCGGCGGGACAGCGCTGGGCCAAGGCGTAGAGGGCTCTaGCCTCCGCGCTGCGGTCGCGAGCCAGTTGCAGCAGCCATATAC | + |
|
Preference number: 5 (lower is better) Translates to: RRRRRDSAGPRRRGL*PPRCGREPVAAAIY Trigger: GTATATGGCTGCTGCAACTGGCTCGCGACCGCAGCGCGGAGGGCAGAGCCCTCTACGCCTTGGCCCAGCGCTGTCCCGCCGACGCCGACG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 ENSMUST00000167118.2 |
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| CDS CCA 90 bp | CGGCACACTGGCCGGCAGCGGGTCACTAACGCGCGAGGCGGCACGTaGCTCAGCACCTGCACCAGCAGCTCAGGGGGCAGCTTGGTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: RHTGRQRVTNARGGT*LSTCTSSSGGSLVR Trigger: TCTAACCAAGCTGCCCCCTGAGCTGCTGGTGCAGGTGCTGAGCCACGTGCCGCCTCGCGCGTTAGTGACCCGCTGCCGGCCAGTGTGCCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 ENSMUST00000167118.2 |
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| CDS CCA 90 bp | CAGTTCTCACGGGCGCCCCACCAGTCAGCTATGCAGATCTCAATCTaGCCACTGTCCAACAGCTCCTGCCATACTCCTTCCTTCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QFSRAPHQSAMQISI*PLSNSSCHTPSFTR Trigger: CCTGGTGAAGGAAGGAGTATGGCAGGAGCTGTTGGACAGTGGCCAGATTGAGATCTGCATAGCTGACTGGTGGGGCGCCCGTGAGAACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 ENSMUST00000167118.2 |
||
| CDS GCA 90 bp | GGTACCAGCGTCAAATTCTTTTCCACGGCCCAACCATTTCCGCCGTaGTCCACTTCCCAACCTCTGAAGCCCTGTTCTCCGCAGGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GTSVKFFSTAQPFPP*STSQPLKPCSPQEL Trigger: CAACTCCTGCGGAGAACAGGGCTTCAGAGGTTGGGAAGTGGAGCACGGCGGAAATGGTTGGGCCGTGGAAAAGAATTTGACGCTGGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 ENSMUST00000167118.2 |
||
| CDS-3UTR CAA 90 bp | GCTCAGGCTGGCCTTGAAGTCAGTATACAGCTGGGGATGACCTTGAACTCCAGAGAGTTGTGGATGAGGTaGCGGCCAAACGGCGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: AQAGLEVSIQLGMTLNSRELWMR*RPNGAL Trigger: GAGAGCGCCGTTTGGCCGCAACCTCATCCACAACTC...TCTGGAGTTCAAGGTCATCCCCAGCTGTATACTGACTTCAAGGCCAGCCTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
||
| CDS GCA 90 bp | CTTCGTTTTCATATTCATCCAGTAGGCGAACTCGAAGCCGGTAGATaGAGCCGCAGTTCTCACGGGCGCCCCACCAGTCAGCTATGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LRFHIHPVGELEAGR*SRSSHGRPTSQLCR Trigger: TCTGCATAGCTGACTGGTGGGGCGCCCGTGAGAACTGCGGCTGCATCTACCGGCTTCGAGTTCGCCTACTGGATGAATATGAAAACGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 ENSMUST00000167118.2 |
||
| CDS-3UTR CAA 90 bp | CCATGTGGTTGCTGGGAATTGAACTCAGGACTCTGGAAGAGCAGTCAGTGCTCTGAGTTGTGGATGAGGTaGCGGCCAAACGGCGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PCGCWELNSGLWKSSQCSELWMR*RPNGAL Trigger: GAGAGCGCCGTTTGGCCGCAACCTCATCCACAACTC...AGAGCACTGACTGCTCTTCCAGAGTCCTGAGTTCAATTCCCAGCAACCACATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
||
| CDS-3UTR CAA 90 bp | CTGGGAATTGAACTCAGGACTCTGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGGAGTTGTGGATGAGGTaGCGGCCAAACGGCGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LGIELRTLEEQSVLLTAEELWMR*RPNGAL Trigger: GAGAGCGCCGTTTGGCCGCAACCTCATCCACAACTC...CTCAGCGGTTAAGAGCACTGACTGCTCTTCCAGAGTCCTGAGTTCAATTCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
||
| CDS-3UTR CAA 90 bp | CTGGGAATTGAACTCAGGACTCTGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGTGTTCTCCGCAGGAGTaGTGGATGAGGTTGCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LGIELRTLEEQSVLLTAECSPQE*WMRLRP Trigger: TGGCCGCAACCTCATCCACAACTCCTGCGGAGAACA...CTCAGCGGTTAAGAGCACTGACTGCTCTTCCAGAGTCCTGAGTTCAATTCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
||
| CDS-3UTR CAA 90 bp | CTGGGAATTGAACTCAGGACTCTGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGTCTACAAGCTGCCTCTaGGAGCACCACTCAAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LGIELRTLEEQSVLLTAESTSCL*EHHSKE Trigger: TTCTTTTGAGTGGTGCTCCAAGAGGCAGCTTGTAGA...CTCAGCGGTTAAGAGCACTGACTGCTCTTCCAGAGTCCTGAGTTCAATTCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
||
| CDS-3UTR CAA 90 bp | ATGTGGTTGCTGGGAATTGAACTCAGGACTCTGGAAGAGCAGTCAGTGCTCTTATCTACAAGCTGCCTCTaGGAGCACCACTCAAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: MWLLGIELRTLEEQSVLLSTSCL*EHHSKE Trigger: TTCTTTTGAGTGGTGCTCCAAGAGGCAGCTTGTAGA...TAAGAGCACTGACTGCTCTTCCAGAGTCCTGAGTTCAATTCCCAGCAACCACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
||
| CDS-3UTR CAA 90 bp | GAGTATACTGTTGCTATCTTCAGTCACTCCAGAAGAGGGCATCAGATCACATTGTCTACAAGCTGCCTCTaGGAGCACCACTCAAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: EYTVAIFSHSRRGHQITLSTSCL*EHHSKE Trigger: TTCTTTTGAGTGGTGCTCCAAGAGGCAGCTTGTAGA...CAATGTGATCTGATGCCCTCTTCTGGAGTGACTGAAGATAGCAACAGTATACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
||
| CDS-3UTR CAA 90 bp | CTTTCTCCTTTTGTTATGATCCCAAGCTTGGTCTATTGGATATTCTCTCTTTTTTGTTCTCCGCAGGAGTaGTGGATGAGGTTGCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSPFVMIPSLVYWIFSLFCSPQE*WMRLRP Trigger: TGGCCGCAACCTCATCCACAACTCCTGCGGAGAACA...AAAAAGAGAGAATATCCAATAGACCAAGCTTGGGATCATAACAAAAGGAGAAAG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 |
||
| CDS GCA 72 bp | CGGCGGGACAGCGCTGGGCCAAGGCGTAGAGGGCTCTaGCCTCCGCGCTGCGGTCGCGAGCCAGTTGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RRDSAGPRRRGL*PPRCGREPVAA Trigger: TGCTGCAACTGGCTCGCGACCGCAGCGCGGAGGGCAGAGCCCTCTACGCCTTGGCCCAGCGCTGTCCCGCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 ENSMUST00000167118.2 |
||
| CDS CCA 72 bp | GGCCGGCAGCGGGTCACTAACGCGCGAGGCGGCACGTaGCTCAGCACCTGCACCAGCAGCTCAGGGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GRQRVTNARGGT*LSTCTSSSGGS Trigger: GCTGCCCCCTGAGCTGCTGGTGCAGGTGCTGAGCCACGTGCCGCCTCGCGCGTTAGTGACCCGCTGCCGGCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 ENSMUST00000167118.2 |
||
| CDS CCA 72 bp | CAGAATCGGGCCAGAGCGCAGAATGGGAACTCGTCGTaGCGGTTGCCGTCGGCGTCGGCGTCGGCGTCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: QNRARAQNGNSS*RLPSASASASA Trigger: CGCCGACGCCGACGCCGACGCCGACGGCAACCGCCACGACGAGTTCCCATTCTGCGCTCTGGCCCGATTCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 ENSMUST00000167118.2 |
||
| CDS GCA 72 bp | AGGGCTCTGCCCTCCGCGCTGCGGTCGCGAGCCAGTTaGAGCAGCCATATACTTGGGCCATCTACCAGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: RALPSALRSRAS*SSHILGPSTRS Trigger: CGACCTGGTAGATGGCCCAAGTATATGGCTGCTGCAACTGGCTCGCGACCGCAGCGCGGAGGGCAGAGCCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 ENSMUST00000167118.2 |
||
| CDS CCA 72 bp | GGCTCAGCACCTGCACCAGCAGCTCAGGGGGCAGCTTaGTTAGAGCCAGGCGCCGAGCTTCAGTCATCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GSAPAPAAQGAA*LEPGAELQSSA Trigger: GGCAGATGACTGAAGCTCGGCGCCTGGCTCTAACCAAGCTGCCCCCTGAGCTGCTGGTGCAGGTGCTGAGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 ENSMUST00000167118.2 |
||
| CDS CAA 90 bp | TCCCAACCTCTGAAGCCCTGTTCTCCGCAGGAGTTGTGGATGAGGTaGCGGCCAAACGGCGCTCTCAGGCAGAATCGGGCCAGAGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: SQPLKPCSPQELWMR*RPNGALRQNRARAQ Trigger: CTGCGCTCTGGCCCGATTCTGCCTGAGAGCGCCGTTTGGCCGCAACCTCATCCACAACTCCTGCGGAGAACAGGGCTTCAGAGGTTGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 ENSMUST00000167118.2 |
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| CDS CAA 72 bp | CTGAAGCCCTGTTCTCCGCAGGAGTTGTGGATGAGGTaGCGGCCAAACGGCGCTCTCAGGCAGAATCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: LKPCSPQELWMR*RPNGALRQNRA Trigger: GGCCCGATTCTGCCTGAGAGCGCCGTTTGGCCGCAACCTCATCCACAACTCCTGCGGAGAACAGGGCTTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 ENSMUST00000167118.2 |
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| CDS CCA 72 bp | TCCCAACCTCTGAAGCCCTGTTCTCCGCAGGAGTTGTaGATGAGGTTGCGGCCAAACGGCGCTCTCAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SQPLKPCSPQEL*MRLRPNGALRQ Trigger: CTGCCTGAGAGCGCCGTTTGGCCGCAACCTCATCCACAACTCCTGCGGAGAACAGGGCTTCAGAGGTTGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 ENSMUST00000167118.2 |
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| CDS GCA 72 bp | CATATTCATCCAGTAGGCGAACTCGAAGCCGGTAGATaGAGCCGCAGTTCTCACGGGCGCCCCACCAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: HIHPVGELEAGR*SRSSHGRPTSQ Trigger: CTGACTGGTGGGGCGCCCGTGAGAACTGCGGCTGCATCTACCGGCTTCGAGTTCGCCTACTGGATGAATATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 ENSMUST00000167118.2 |
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| CDS CCA 72 bp | CGGGCGCCCCACCAGTCAGCTATGCAGATCTCAATCTaGCCACTGTCCAACAGCTCCTGCCATACTCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: RAPHQSAMQISI*PLSNSSCHTPS Trigger: GGAAGGAGTATGGCAGGAGCTGTTGGACAGTGGCCAGATTGAGATCTGCATAGCTGACTGGTGGGGCGCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 ENSMUST00000167118.2 |
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| CDS CAA 72 bp | ACTTCCCAACCTCTGAAGCCCTGTTCTCCGCAGGAGTaGTGGATGAGGTTGCGGCCAAACGGCGCTCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: TSQPLKPCSPQE*WMRLRPNGALR Trigger: CCTGAGAGCGCCGTTTGGCCGCAACCTCATCCACAACTCCTGCGGAGAACAGGGCTTCAGAGGTTGGGAAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 ENSMUST00000167118.2 |
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| CDS GCA 72 bp | GTCAAATTCTTTTCCACGGCCCAACCATTTCCGCCGTaGTCCACTTCCCAACCTCTGAAGCCCTGTTCTCCG | + |
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Preference number: 6 (lower is better) Translates to: VKFFSTAQPFPP*STSQPLKPCSP Trigger: CGGAGAACAGGGCTTCAGAGGTTGGGAAGTGGAGCACGGCGGAAATGGTTGGGCCGTGGAAAAGAATTTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 ENSMUST00000167118.2 |
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| CDS GCA 72 bp | TCCTGCCATACTCCTTCCTTCACCAGGTCTACAAGCTaGCTCTTGGAGCACCACTCAAAAGAAGTCACAAAG | + |
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Preference number: 6 (lower is better) Translates to: SCHTPSFTRSTS*LLEHHSKEVTK Trigger: CTTTGTGACTTCTTTTGAGTGGTGCTCCAAGAGGCAGCTTGTAGACCTGGTGAAGGAAGGAGTATGGCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 ENSMUST00000167118.2 |
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| CDS CCA 72 bp | TTGGAGCACCACTCAAAAGAAGTCACAAAGCAGGTCTaGGAAGGAGCCCCTGGTACCAGCGTCAAATTCTTT | + |
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Preference number: 6 (lower is better) Translates to: LEHHSKEVTKQV*EGAPGTSVKFF Trigger: AAAGAATTTGACGCTGGTACCAGGGGCTCCTTCCCAGACCTGCTTTGTGACTTCTTTTGAGTGGTGCTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032818.13 ENSMUST00000108278.9 ENSMUST00000108279.9 ENSMUST00000167118.2 |
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