Pregenerated sensors for FBXO16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034532Ensembl transcript IDs: ENSMUST00000169656.3, ENSMUST00000224629.2, ENSMUST00000226005.2
Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | TACTTCCCTCCCCACATTCCTCTGCCACCTCCAACACACCATGTCTaGCAGCCTCTCTCTGAAGGCCGCCGCAGAAGCTGGACCCAAGAC | + |
Preference number: 1 (lower is better) Translates to: YFPPHIPLPPPTHHV*QPLSEGRRRSWTQD Trigger: GTCTTGGGTCCAGCTTCTGCGGCGGCCTTCAGAGAGAGGCTGGCAGACATGGTGTGTTGGAGGTGGCAGAGGAATGTGGGGAGGGAAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR CCA 90 bp | ACACACCATGTCTGCCAGCCTCTCTCTGAAGGCCGCCGCAGAAGCTaGACCCAAGACCTCCACTCTCCCTGCTCCCTTCATCTCTTTGGC | + |
Preference number: 1 (lower is better) Translates to: THHVCQPLSEGRRRS*TQDLHSPCSLHLFG Trigger: GCCAAAGAGATGAAGGGAGCAGGGAGAGTGGAGGTCTTGGGTCCAGCTTCTGCGGCGGCCTTCAGAGAGAGGCTGGCAGACATGGTGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR GCA 90 bp | AGTGCTTCCGTTGCTGCTTCACGGTCTGAGGGTGCCACTGGCAGATaGAGAGGCCAGGCGAGACGAACTGGAACTTTTGGAGGGGAACTC | + |
Preference number: 1 (lower is better) Translates to: SASVAASRSEGATGR*RGQARRTGTFGGEL Trigger: GAGTTCCCCTCCAAAAGTTCCAGTTCGTCTCGCCTGGCCTCTGCATCTGCCAGTGGCACCCTCAGACCGTGAAGCAGCAACGGAAGCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226005.2 |
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3UTR GCA 90 bp | AGAGAAGAAGAGTTGGGTATCACTACTTCCCTCCCCACATTCCTCTaGCACCTCCAACACACCATGTCTGCCAGCCTCTCTCTGAAGGCC | + |
Preference number: 1 (lower is better) Translates to: REEELGITTSLPTFL*HLQHTMSASLSLKA Trigger: GGCCTTCAGAGAGAGGCTGGCAGACATGGTGTGTTGGAGGTGGCAGAGGAATGTGGGGAGGGAAGTAGTGATACCCAACTCTTCTTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR CCA 90 bp | TGGGTGACGCCAGGAGTGTGGGAGAGTGTAAGAGAGAAGAAGAGTTaGGTATCACTACTTCCCTCCCCACATTCCTCTGCCACCTCCAAC | + |
Preference number: 1 (lower is better) Translates to: WVTPGVWESVREKKS*VSLLPSPHSSATSN Trigger: GTTGGAGGTGGCAGAGGAATGTGGGGAGGGAAGTAGTGATACCCAACTCTTCTTCTCTCTTACACTCTCCCACACTCCTGGCGTCACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR GCA 90 bp | TTTTCCATGGTTCTGCCTAGACTTACTGCTCAGCCTTGCCAGTTCTaGTCTCTTGCCTCAGGAGGCTGGCAGCTAAGGACAGAATCACTA | + |
Preference number: 1 (lower is better) Translates to: FSMVLPRLTAQPCQF*SLASGGWQLRTESL Trigger: TAGTGATTCTGTCCTTAGCTGCCAGCCTCCTGAGGCAAGAGAGCAGAACTGGCAAGGCTGAGCAGTAAGTCTAGGCAGAACCATGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR GCA 90 bp | TGCTTACATGCCCATTGTCACTCCTTTAGACATGTGCTCTATTATTaGTGGAGTGGGAAGTTGGTGCATGCGGCGGCCAGAGGTCACCTT | + |
Preference number: 1 (lower is better) Translates to: CLHAHCHSFRHVLYY*WSGKLVHAAARGHL Trigger: AAGGTGACCTCTGGCCGCCGCATGCACCAACTTCCCACTCCAGCAATAATAGAGCACATGTCTAAAGGAGTGACAATGGGCATGTAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR CCA 90 bp | CAACATGTAAGAGTCATGGATCATGGCCCAGGAGAGCTGCAGGCCTaGATCCAGGGTGGCCAGGATGGAATACAGGTTTTGGTAAGTAAT | + |
Preference number: 1 (lower is better) Translates to: QHVRVMDHGPGELQA*IQGGQDGIQVLVSN Trigger: ATTACTTACCAAAACCTGTATTCCATCCTGGCCACCCTGGATCCAGGCCTGCAGCTCTCCTGGGCCATGATCCATGACTCTTACATGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR GCA 90 bp | CCCTGTACTCTTTCCCTCCATGATGCTGGTTATTTTCCATGGTTCTaGCTAGACTTACTGCTCAGCCTTGCCAGTTCTGCTCTCTTGCCT | + |
Preference number: 1 (lower is better) Translates to: PCTLSLHDAGYFPWF*LDLLLSLASSALLP Trigger: AGGCAAGAGAGCAGAACTGGCAAGGCTGAGCAGTAAGTCTAGGCAGAACCATGGAAAATAACCAGCATCATGGAGGGAAAGAGTACAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR CCA 90 bp | TACCAGCCCTGTACTCTTTCCCTCCATGATGCTGGTTATTTTCCATaGTTCTGCCTAGACTTACTGCTCAGCCTTGCCAGTTCTGCTCTC | + |
Preference number: 1 (lower is better) Translates to: YQPCTLSLHDAGYFP*FCLDLLLSLASSAL Trigger: GAGAGCAGAACTGGCAAGGCTGAGCAGTAAGTCTAGGCAGAACCATGGAAAATAACCAGCATCATGGAGGGAAAGAGTACAGGGCTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR CCA 90 bp | TTACATGCCCATTGTCACTCCTTTAGACATGTGCTCTATTATTGCTaGAGTGGGAAGTTGGTGCATGCGGCGGCCAGAGGTCACCTTTCA | + |
Preference number: 1 (lower is better) Translates to: LHAHCHSFRHVLYYC*SGKLVHAAARGHLS Trigger: TGAAAGGTGACCTCTGGCCGCCGCATGCACCAACTTCCCACTCCAGCAATAATAGAGCACATGTCTAAAGGAGTGACAATGGGCATGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR CCA 90 bp | CCTGCATTTGACTTAGAAGAGGAGACTCATGTAAAGACAGGAAGATaGCCAATGGAGAGAGACCTCGAGACCTTGGTGTCACTTGCTGAC | + |
Preference number: 1 (lower is better) Translates to: PAFDLEEETHVKTGR*PMERDLETLVSLAD Trigger: GTCAGCAAGTGACACCAAGGTCTCGAGGTCTCTCTCCATTGGCCATCTTCCTGTCTTTACATGAGTCTCCTCTTCTAAGTCAAATGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR GCA 90 bp | AGGAAGGATTTATTTGGCCACAGAAGAAACCAGAGCTCACTTTGTTaGAAACGGGGTGGAGCGTTAGATAGGAAGGGGCCAAGAATAAGA | + |
Preference number: 1 (lower is better) Translates to: RKDLFGHRRNQSSLC*KRGGALDRKGPRIR Trigger: TCTTATTCTTGGCCCCTTCCTATCTAACGCTCCACCCCGTTTGCAACAAAGTGAGCTCTGGTTTCTTCTGTGGCCAAATAAATCCTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR CCA 90 bp | ACTAGTATCTTTTCTTCTAGTTCCAGATGGGTGACGCCAGGAGTGTaGGAGAGTGTAAGAGAGAAGAAGAGTTGGGTATCACTACTTCCC | + |
Preference number: 1 (lower is better) Translates to: TSIFSSSSRWVTPGV*ESVREKKSWVSLLP Trigger: GGGAAGTAGTGATACCCAACTCTTCTTCTCTCTTACACTCTCCCACACTCCTGGCGTCACCCATCTGGAACTAGAAGAAAAGATACTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR GCA 90 bp | ACCTCAGACTTCCAGTATTCAGACTGTGAGCTAATGCACTTCTATTaGAGAAACCACTCGATCTGTGCTATAGCTAACGCCCTAAGCATC | + |
Preference number: 1 (lower is better) Translates to: TSDFQYSDCELMHFY*RNHSICAIANALSI Trigger: GATGCTTAGGGCGTTAGCTATAGCACAGATCGAGTGGTTTCTGCAATAGAAGTGCATTAGCTCACAGTCTGAATACTGGAAGTCTGAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR GCA 90 bp | ATGTCTATTGCCATATTTCCAAGAGTCTGCGTTTGTCACCATTTCTaGTGTTCATTCTCTTTTCCTGAGATACACAAACTCGCAGGACCT | + |
Preference number: 1 (lower is better) Translates to: MSIAIFPRVCVCHHF*CSFSFPEIHKLAGP Trigger: AGGTCCTGCGAGTTTGTGTATCTCAGGAAAAGAGAATGAACAGCAGAAATGGTGACAAACGCAGACTCTTGGAAATATGGCAATAGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR TCA 90 bp | AAGAGTCTGCGTTTGTCACCATTTCTGCTGTTCATTCTCTTTTCCTaGGATACACAAACTCGCAGGACCTTTCACAGTAAGATACTTAAG | + |
Preference number: 1 (lower is better) Translates to: KSLRLSPFLLFILFS*DTQTRRTFHSKILK Trigger: CTTAAGTATCTTACTGTGAAAGGTCCTGCGAGTTTGTGTATCTCAGGAAAAGAGAATGAACAGCAGAAATGGTGACAAACGCAGACTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR TCA 90 bp | CTTTACTTAGGTAACTACATCGCAGAACAGCAGTTTCTGGGGAACTaGGATGGGTATATGGGTAGATGGTTGATTGTAGAAAGAAATGTT | + |
Preference number: 1 (lower is better) Translates to: LYLGNYIAEQQFLGN*DGYMGRWLIVERNV Trigger: AACATTTCTTTCTACAATCAACCATCTACCCATATACCCATCTCAGTTCCCCAGAAACTGCTGTTCTGCGATGTAGTTACCTAAGTAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR GCA 90 bp | ATGAACATTCACGTCTGTACTGAGTTGTTGTGGATTTGGTTTTCATaGTTGCATTATGTTATTTGGGTTTCCAGAATCACAGAACCCGCA | + |
Preference number: 1 (lower is better) Translates to: MNIHVCTELLWIWFS*LHYVIWVSRITEPA Trigger: TGCGGGTTCTGTGATTCTGGAAACCCAAATAACATAATGCAAGCATGAAAACCAAATCCACAACAACTCAGTACAGACGTGAATGTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR GCA 90 bp | AGCCTCTCGTGGGTTCCTTCATATTCAGACAATAACAGCAAACACTaGTTTTCCATTATTCTACTTTACTTAGGTAACTACATCGCAGAA | + |
Preference number: 1 (lower is better) Translates to: SLSWVPSYSDNNSKH*FSIILLYLGNYIAE Trigger: TTCTGCGATGTAGTTACCTAAGTAAAGTAGAATAATGGAAAAGCAGTGTTTGCTGTTATTGTCTGAATATGAAGGAACCCACGAGAGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR CCA 90 bp | GCCTGTTACATGAACATTCACGTCTGTACTGAGTTGTTGTGGATTTaGTTTTCATGCTTGCATTATGTTATTTGGGTTTCCAGAATCACA | + |
Preference number: 1 (lower is better) Translates to: ACYMNIHVCTELLWI*FSCLHYVIWVSRIT Trigger: TGTGATTCTGGAAACCCAAATAACATAATGCAAGCATGAAAACCAAATCCACAACAACTCAGTACAGACGTGAATGTTCATGTAACAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | GTTCTGCTCTCTTGCCTCAGGAGGCTGGCAGCTAAGGACAGAATCACTAGTATCGGCCGCCGCAGAAGCTaGACCCAAGACCTCCACTCT | + |
Preference number: 2 (lower is better) Translates to: VLLSCLRRLAAKDRITSIGRRRS*TQDLHS Trigger: AGAGTGGAGGTCTTGGGTCCAGCTTCTGCGGCGGCC...GATACTAGTGATTCTGTCCTTAGCTGCCAGCCTCCTGAGGCAAGAGAGCAGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR GCA 90 bp | ATCAGGAGAATGGGAGGGAAGAGTGTGTTAGCGACATGGAGGACTGATGTGGCCCCAGTTCTGCTCTCTTaGCTCAGGAGGCTGGCAGCT | + |
Preference number: 2 (lower is better) Translates to: IRRMGGKSVLATWRTDVAPVLLS*LRRLAA Trigger: AGCTGCCAGCCTCCTGAGGCAAGAGAGCAGAACTGG...GGCCACATCAGTCCTCCATGTCGCTAACACACTCTTCCCTCCCATTCTCCTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR GCA 90 bp | ATGCTTTCTTTGGCTGAGGCATCTCCCTGGTACCAGCCCTGTACTCTTTCCCTCCCAGTTCTGCTCTCTTaGCTCAGGAGGCTGGCAGCT | + |
Preference number: 2 (lower is better) Translates to: MLSLAEASPWYQPCTLSLPVLLS*LRRLAA Trigger: AGCTGCCAGCCTCCTGAGGCAAGAGAGCAGAACTGG...GAGGGAAAGAGTACAGGGCTGGTACCAGGGAGATGCCTCAGCCAAAGAAAGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | GTGTGGGAGAGTGTAAGAGAGAAGAAGAGTTGGGTATCACTACTTCCCTCCCCAGGCCGCCGCAGAAGCTaGACCCAAGACCTCCACTCT | + |
Preference number: 2 (lower is better) Translates to: VWESVREKKSWVSLLPSPGRRRS*TQDLHS Trigger: AGAGTGGAGGTCTTGGGTCCAGCTTCTGCGGCGGCC...TGGGGAGGGAAGTAGTGATACCCAACTCTTCTTCTCTCTTACACTCTCCCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR GCA 90 bp | AGCATTGGGGTGGGTAGCAAGGAGCATGTGTTCCACCACAGGGGAGATAAGAGTCTCCCCACATTCCTCTaGCACCTCCAACACACCATG | + |
Preference number: 2 (lower is better) Translates to: SIGVGSKEHVFHHRGDKSLPTFL*HLQHTM Trigger: CATGGTGTGTTGGAGGTGGCAGAGGAATGTGGGGAG...ACTCTTATCTCCCCTGTGGTGGAACACATGCTCCTTGCTACCCACCCCAATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | AGCATTGGGGTGGGTAGCAAGGAGCATGTGTTCCACCACAGGGGAGATAAGAGTACTTCTGAAGGAGCCTaGGGGTGTCATTCCCTTCCC | + |
Preference number: 2 (lower is better) Translates to: SIGVGSKEHVFHHRGDKSTSEGA*GCHSLP Trigger: GGGAAGGGAATGACACCCCCAGGCTCCTTCAGAAGT...ACTCTTATCTCCCCTGTGGTGGAACACATGCTCCTTGCTACCCACCCCAATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | GATAGGAAGGGGCCAAGAATAAGACAGACTCTTCAGAGGACGAACTCTGGGACCCCAGTGGCCAATGGTTaGGCAGGGAGACAGAGACAG | + |
Preference number: 2 (lower is better) Translates to: DRKGPRIRQTLQRTNSGTPVANG*AGRQRQ Trigger: CTGTCTCTGTCTCCCTGCCCAACCATTGGCCACTGG...GGTCCCAGAGTTCGTCCTCTGAAGAGTCTGTCTTATTCTTGGCCCCTTCCTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | GATAGGAAGGGGCCAAGAATAAGACAGACTCTTCAGAGGACGAACTCTGGGACCGATGCCAGTGGCCAATaGTTGGGCAGGGAGACAGAG | + |
Preference number: 2 (lower is better) Translates to: DRKGPRIRQTLQRTNSGTDASGQ*LGRETE Trigger: CTCTGTCTCCCTGCCCAACCATTGGCCACTGGCATC...GGTCCCAGAGTTCGTCCTCTGAAGAGTCTGTCTTATTCTTGGCCCCTTCCTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR CAA 90 bp | ATGGGTGACGCCAGGAGTGTGGGAGAGTGTAAGAGAGAAGAAGAGTaGGGTATCACTACTTCCCTCCCCACATTCCTCTGCCACCTCCAA | + |
Preference number: 2 (lower is better) Translates to: MGDARSVGECKREEE*GITTSLPTFLCHLQ Trigger: TTGGAGGTGGCAGAGGAATGTGGGGAGGGAAGTAGTGATACCCAACTCTTCTTCTCTCTTACACTCTCCCACACTCCTGGCGTCACCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR TCA 90 bp | TGGCCAGTGCCTGCACAGGGAACTTGCCATAACCATGCGACCCCAAGTTATGTAGATGCTTTCTTTGGCTaGGGCATCTCCCTGGTACCA | + |
Preference number: 2 (lower is better) Translates to: WPVPAQGTCHNHATPSYVDAFFG*GISLVP Trigger: TGGTACCAGGGAGATGCCTCAGCCAAAGAAAGCATC...TACATAACTTGGGGTCGCATGGTTATGGCAAGTTCCCTGTGCAGGCACTGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR GCA 90 bp | ATGCTTTCTTTGGCTGAGGCATCTCCCTGGTACCAGCCCTGTACTCTTTCCCTCAAAGTTTCTCACTGCTaGCAGGTCCAGGGGCTTCAG | + |
Preference number: 2 (lower is better) Translates to: MLSLAEASPWYQPCTLSLKVSHC*QVQGLQ Trigger: CTGAAGCCCCTGGACCTGGCAGCAGTGAGAAACTTT...GAGGGAAAGAGTACAGGGCTGGTACCAGGGAGATGCCTCAGCCAAAGAAAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR GCA 90 bp | GTTCTGCTCTCTTGCCTCAGGAGGCTGGCAGCTAAGGACAGAATCACTAGTATCCTCCCCACATTCCTCTaGCACCTCCAACACACCATG | + |
Preference number: 2 (lower is better) Translates to: VLLSCLRRLAAKDRITSILPTFL*HLQHTM Trigger: CATGGTGTGTTGGAGGTGGCAGAGGAATGTGGGGAG...GATACTAGTGATTCTGTCCTTAGCTGCCAGCCTCCTGAGGCAAGAGAGCAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR GCA 90 bp | GGGGCCAAGAATAAGACAGACTCTTCAGAGGACGAACTCTGGGACCTACTCCCTCTTACTGCTCAGCCTTaGCAGTTCTGCTCTCTTGCC | + |
Preference number: 2 (lower is better) Translates to: GAKNKTDSSEDELWDLLPLTAQP*QFCSLA Trigger: GGCAAGAGAGCAGAACTGGCAAGGCTGAGCAGTAAG...AGGGAGTAGGTCCCAGAGTTCGTCCTCTGAAGAGTCTGTCTTATTCTTGGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | ATCAGGAGAATGGGAGGGAAGAGTGTGTTAGCGACATGGAGGACTGATGTGGCCCAGGAAGATGGCCAATaGAGAGAGACCTCGAGACCT | + |
Preference number: 2 (lower is better) Translates to: IRRMGGKSVLATWRTDVAQEDGQ*RETSRP Trigger: AGGTCTCGAGGTCTCTCTCCATTGGCCATCTTCCTG...GGCCACATCAGTCCTCCATGTCGCTAACACACTCTTCCCTCCCATTCTCCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | AGCATTGGGGTGGGTAGCAAGGAGCATGTGTTCCACCACAGGGGAGATAAGAGTCAGGAAGATGGCCAATaGAGAGAGACCTCGAGACCT | + |
Preference number: 2 (lower is better) Translates to: SIGVGSKEHVFHHRGDKSQEDGQ*RETSRP Trigger: AGGTCTCGAGGTCTCTCTCCATTGGCCATCTTCCTG...ACTCTTATCTCCCCTGTGGTGGAACACATGCTCCTTGCTACCCACCCCAATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | GATAGGAAGGGGCCAAGAATAAGACAGACTCTTCAGAGGACGAACTCTGGGACCAAGAGTCATGGATCATaGCCCAGGAGAGCTGCAGGC | + |
Preference number: 2 (lower is better) Translates to: DRKGPRIRQTLQRTNSGTKSHGS*PRRAAG Trigger: GCCTGCAGCTCTCCTGGGCCATGATCCATGACTCTT...GGTCCCAGAGTTCGTCCTCTGAAGAGTCTGTCTTATTCTTGGCCCCTTCCTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | GGACCCAAGACCTCCACTCTCCCTGCTCCCTTCATCTCTTTGGCACAAAGGATGGTAAAGACAGGAAGATaGCCAATGGAGAGAGACCTC | + |
Preference number: 2 (lower is better) Translates to: GPKTSTLPAPFISLAQRMVKTGR*PMERDL Trigger: GAGGTCTCTCTCCATTGGCCATCTTCCTGTCTTTAC...CATCCTTTGTGCCAAAGAGATGAAGGGAGCAGGGAGAGTGGAGGTCTTGGGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | GATAGGAAGGGGCCAAGAATAAGACAGACTCTTCAGAGGACGAACTCTGGGACCCTTGCCTCAGGAGGCTaGCAGCTAAGGACAGAATCA | + |
Preference number: 2 (lower is better) Translates to: DRKGPRIRQTLQRTNSGTLASGG*QLRTES Trigger: TGATTCTGTCCTTAGCTGCCAGCCTCCTGAGGCAAG...GGTCCCAGAGTTCGTCCTCTGAAGAGTCTGTCTTATTCTTGGCCCCTTCCTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | TCTGAGAACGGAACTCATCAGGCCTACACAGGATGCTTTCTTTGGCTGAGGCATGCTGAGGCATCTCCCTaGTACCAGCCCTGTACTCTT | + |
Preference number: 2 (lower is better) Translates to: SENGTHQAYTGCFLWLRHAEASP*YQPCTL Trigger: AAGAGTACAGGGCTGGTACCAGGGAGATGCCTCAGC...ATGCCTCAGCCAAAGAAAGCATCCTGTGTAGGCCTGATGAGTTCCGTTCTCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | GATAGGAAGGGGCCAAGAATAAGACAGACTCTTCAGAGGACGAACTCTGGGACCAGTGTGTTAGCGACATaGAGGACTGATGTGGCCCAG | + |
Preference number: 2 (lower is better) Translates to: DRKGPRIRQTLQRTNSGTSVLAT*RTDVAQ Trigger: CTGGGCCACATCAGTCCTCCATGTCGCTAACACACT...GGTCCCAGAGTTCGTCCTCTGAAGAGTCTGTCTTATTCTTGGCCCCTTCCTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR TCA 90 bp | GTTCTGCTCTCTTGCCTCAGGAGGCTGGCAGCTAAGGACAGAATCACTAGTATCTCCAACTCTCAGCTGTaGAGAACACCTTGTCGTTTC | + |
Preference number: 2 (lower is better) Translates to: VLLSCLRRLAAKDRITSISNSQL*RTPCRF Trigger: GAAACGACAAGGTGTTCTTCACAGCTGAGAGTTGGA...GATACTAGTGATTCTGTCCTTAGCTGCCAGCCTCCTGAGGCAAGAGAGCAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR TCA 90 bp | GTGTGGGAGAGTGTAAGAGAGAAGAAGAGTTGGGTATCACTACTTCCCTCCCCATCCTTTAATCAGCTTTaGCTCTGGAGCCTCGGTGAG | + |
Preference number: 2 (lower is better) Translates to: VWESVREKKSWVSLLPSPSFNQL*LWSLGE Trigger: CTCACCGAGGCTCCAGAGTCAAAGCTGATTAAAGGA...TGGGGAGGGAAGTAGTGATACCCAACTCTTCTTCTCTCTTACACTCTCCCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | GGGGCCAAGAATAAGACAGACTCTTCAGAGGACGAACTCTGGGACCTACTCCCTAGAGAGAAGAAGAGTTaGGTATCACTACTTCCCTCC | + |
Preference number: 2 (lower is better) Translates to: GAKNKTDSSEDELWDLLPREKKS*VSLLPS Trigger: GGAGGGAAGTAGTGATACCCAACTCTTCTTCTCTCT...AGGGAGTAGGTCCCAGAGTTCGTCCTCTGAAGAGTCTGTCTTATTCTTGGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | TCATCCCACAGTGATTGGATTTGTCACCTAGAGACCAAGCTTTCAATGCATCAGGGCCTGGATCCAGGGTaGCCAGGATGGAATACAGGT | + |
Preference number: 2 (lower is better) Translates to: SSHSDWICHLETKLSMHQGLDPG*PGWNTG Trigger: ACCTGTATTCCATCCTGGCCACCCTGGATCCAGGCC...CTGATGCATTGAAAGCTTGGTCTCTAGGTGACAAATCCAATCACTGTGGGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | TCATCCCACAGTGATTGGATTTGTCACCTAGAGACCAAGCTTTCAATGCATCAGGATGCCAGTGGCCAATaGTTGGGCAGGGAGACAGAG | + |
Preference number: 2 (lower is better) Translates to: SSHSDWICHLETKLSMHQDASGQ*LGRETE Trigger: CTCTGTCTCCCTGCCCAACCATTGGCCACTGGCATC...CTGATGCATTGAAAGCTTGGTCTCTAGGTGACAAATCCAATCACTGTGGGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR CAA 90 bp | CATGTAAAGACAGGAAGATGGCCAATGGAGAGAGACCTCGAGACCTaGGTGTCACTTGCTGACACATCACCTCAGACTTCCAGTATTCAG | + |
Preference number: 2 (lower is better) Translates to: HVKTGRWPMERDLET*VSLADTSPQTSSIQ Trigger: CTGAATACTGGAAGTCTGAGGTGATGTGTCAGCAAGTGACACCAAGGTCTCGAGGTCTCTCTCCATTGGCCATCTTCCTGTCTTTACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR TCA 90 bp | ATCCTGCCCCATAGCATGTGTTTCTGGCTGAACCATGTCTCTTGTAAAGCTACATCCTTTACCAACTTCTaGAGGAGCCTGGGGGTGTCA | + |
Preference number: 2 (lower is better) Translates to: ILPHSMCFWLNHVSCKATSFTNF*RSLGVS Trigger: TGACACCCCCAGGCTCCTTCAGAAGTTGGTAAAGGA...TGTAGCTTTACAAGAGACATGGTTCAGCCAGAAACACATGCTATGGGGCAGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR TCA 90 bp | CGGCGGCCAGAGGTCACCTTTCAGGAGTTAAGTTCTCTCCTTCCACCATGGTTTTACTCTTTCCCTCCATaGTGCTGGTTATTTTCCATG | + |
Preference number: 2 (lower is better) Translates to: RRPEVTFQELSSLLPPWFYSFPP*CWLFSM Trigger: CATGGAAAATAACCAGCATCATGGAGGGAAAGAGTA...AAACCATGGTGGAAGGAGAGAACTTAACTCCTGAAAGGTGACCTCTGGCCGCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR TCA 90 bp | TGGCCAGTGCCTGCACAGGGAACTTGCCATAACCATGCGACCCCAAGTTATGTATCCCGCTACACTAAGTaGTTTTGTTCTGTTTTCCAG | + |
Preference number: 2 (lower is better) Translates to: WPVPAQGTCHNHATPSYVSRYTK*FCSVFQ Trigger: CTGGAAAACAGAACAAAATCACTTAGTGTAGCGGGA...TACATAACTTGGGGTCGCATGGTTATGGCAAGTTCCCTGTGCAGGCACTGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR GCA 90 bp | GGACCCAAGACCTCCACTCTCCCTGCTCCCTTCATCTCTTTGGCACAAAGGATGATATTTCCAAGAGTCTaGGTTTGTCACCATTTCTGC | + |
Preference number: 2 (lower is better) Translates to: GPKTSTLPAPFISLAQRMIFPRV*VCHHFC Trigger: GCAGAAATGGTGACAAACGCAGACTCTTGGAAATAT...CATCCTTTGTGCCAAAGAGATGAAGGGAGCAGGGAGAGTGGAGGTCTTGGGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR GCA 90 bp | AGCATTGGGGTGGGTAGCAAGGAGCATGTGTTCCACCACAGGGGAGATAAGAGTTATTTTCCATGGTTCTaGCTAGACTTACTGCTCAGC | + |
Preference number: 2 (lower is better) Translates to: SIGVGSKEHVFHHRGDKSYFPWF*LDLLLS Trigger: GCTGAGCAGTAAGTCTAGGCAGAACCATGGAAAATA...ACTCTTATCTCCCCTGTGGTGGAACACATGCTCCTTGCTACCCACCCCAATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR GCA 90 bp | GATAGGAAGGGGCCAAGAATAAGACAGACTCTTCAGAGGACGAACTCTGGGACCCATGTGCTCTATTATTaGTGGAGTGGGAAGTTGGTG | + |
Preference number: 2 (lower is better) Translates to: DRKGPRIRQTLQRTNSGTHVLYY*WSGKLV Trigger: CACCAACTTCCCACTCCAGCAATAATAGAGCACATG...GGTCCCAGAGTTCGTCCTCTGAAGAGTCTGTCTTATTCTTGGCCCCTTCCTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR GCA 90 bp | AAAGCTCTTTTAAATTGCTTACATGCCCATTGTCACTCCTTTAGACATGTGCTCGGTGCCACTGGCAGATaGAGAGGCCAGGCGAGACGA | + |
Preference number: 2 (lower is better) Translates to: KALLNCLHAHCHSFRHVLGATGR*RGQARR Trigger: TCGTCTCGCCTGGCCTCTGCATCTGCCAGTGGCACC...GAGCACATGTCTAAAGGAGTGACAATGGGCATGTAAGCAATTTAAAAGAGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | GATAGGAAGGGGCCAAGAATAAGACAGACTCTTCAGAGGACGAACTCTGGGACCAGAGAGAAGAAGAGTTaGGTATCACTACTTCCCTCC | + |
Preference number: 2 (lower is better) Translates to: DRKGPRIRQTLQRTNSGTREKKS*VSLLPS Trigger: GGAGGGAAGTAGTGATACCCAACTCTTCTTCTCTCT...GGTCCCAGAGTTCGTCCTCTGAAGAGTCTGTCTTATTCTTGGCCCCTTCCTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | CCCATTGTCACTCCTTTAGACATGTGCTCTATTATTGCTGGAGTGGGAAGTTGGGTGACGCCAGGAGTGTaGGAGAGTGTAAGAGAGAAG | + |
Preference number: 2 (lower is better) Translates to: PIVTPLDMCSIIAGVGSWVTPGV*ESVREK Trigger: CTTCTCTCTTACACTCTCCCACACTCCTGGCGTCAC...CCAACTTCCCACTCCAGCAATAATAGAGCACATGTCTAAAGGAGTGACAATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR GCA 90 bp | AGCATTGGGGTGGGTAGCAAGGAGCATGTGTTCCACCACAGGGGAGATAAGAGTACCCAAGATGTCTATTaGCATATTTCCAAGAGTCTG | + |
Preference number: 2 (lower is better) Translates to: SIGVGSKEHVFHHRGDKSTQDVY*HISKSL Trigger: CAGACTCTTGGAAATATGGCAATAGACATCTTGGGT...ACTCTTATCTCCCCTGTGGTGGAACACATGCTCCTTGCTACCCACCCCAATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR GCA 90 bp | CGGCGGCCAGAGGTCACCTTTCAGGAGTTAAGTTCTCTCCTTCCACCATGGTTTACTCCTTTAGACATGTaGTCTATTATTGCTGGAGTG | + |
Preference number: 2 (lower is better) Translates to: RRPEVTFQELSSLLPPWFTPLDM*SIIAGV Trigger: CACTCCAGCAATAATAGAGCACATGTCTAAAGGAGT...AAACCATGGTGGAAGGAGAGAACTTAACTCCTGAAAGGTGACCTCTGGCCGCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | CCCATTGTCACTCCTTTAGACATGTGCTCTATTATTGCTGGAGTGGGAAGTTGGGAGACCTCGAGACCTTaGTGTCACTTGCTGACACAT | + |
Preference number: 2 (lower is better) Translates to: PIVTPLDMCSIIAGVGSWETSRP*CHLLTH Trigger: ATGTGTCAGCAAGTGACACCAAGGTCTCGAGGTCTC...CCAACTTCCCACTCCAGCAATAATAGAGCACATGTCTAAAGGAGTGACAATGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | CCCATTGTCACTCCTTTAGACATGTGCTCTATTATTGCTGGAGTGGGAAGTTGGCTATTATTGCTGGAGTaGGAAGTTGGTGCATGCGGC | + |
Preference number: 2 (lower is better) Translates to: PIVTPLDMCSIIAGVGSWLLLLE*EVGACG Trigger: GCCGCATGCACCAACTTCCCACTCCAGCAATAATAG...CCAACTTCCCACTCCAGCAATAATAGAGCACATGTCTAAAGGAGTGACAATGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR GCA 90 bp | ATCAGGAGAATGGGAGGGAAGAGTGTGTTAGCGACATGGAGGACTGATGTGGCCGTTTGTCACCATTTCTaGTGTTCATTCTCTTTTCCT | + |
Preference number: 2 (lower is better) Translates to: IRRMGGKSVLATWRTDVAVCHHF*CSFSFP Trigger: AGGAAAAGAGAATGAACAGCAGAAATGGTGACAAAC...GGCCACATCAGTCCTCCATGTCGCTAACACACTCTTCCCTCCCATTCTCCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR GCA 90 bp | ATGCTTTCTTTGGCTGAGGCATCTCCCTGGTACCAGCCCTGTACTCTTTCCCTCGTTTGTCACCATTTCTaGTGTTCATTCTCTTTTCCT | + |
Preference number: 2 (lower is better) Translates to: MLSLAEASPWYQPCTLSLVCHHF*CSFSFP Trigger: AGGAAAAGAGAATGAACAGCAGAAATGGTGACAAAC...GAGGGAAAGAGTACAGGGCTGGTACCAGGGAGATGCCTCAGCCAAAGAAAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | CCCATTGTCACTCCTTTAGACATGTGCTCTATTATTGCTGGAGTGGGAAGTTGGGTAAAGACAGGAAGATaGCCAATGGAGAGAGACCTC | + |
Preference number: 2 (lower is better) Translates to: PIVTPLDMCSIIAGVGSWVKTGR*PMERDL Trigger: GAGGTCTCTCTCCATTGGCCATCTTCCTGTCTTTAC...CCAACTTCCCACTCCAGCAATAATAGAGCACATGTCTAAAGGAGTGACAATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | TCATCCCACAGTGATTGGATTTGTCACCTAGAGACCAAGCTTTCAATGCATCAGCCAGGGTGGCCAGGATaGAATACAGGTTTTGGTAAG | + |
Preference number: 2 (lower is better) Translates to: SSHSDWICHLETKLSMHQPGWPG*NTGFGK Trigger: CTTACCAAAACCTGTATTCCATCCTGGCCACCCTGG...CTGATGCATTGAAAGCTTGGTCTCTAGGTGACAAATCCAATCACTGTGGGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR TCA 90 bp | CCCATTGTCACTCCTTTAGACATGTGCTCTATTATTGCTGGAGTGGGAAGTTGGGCATGTGTTTCTGGCTaGACCATGTCTCTTGTAAAG | + |
Preference number: 2 (lower is better) Translates to: PIVTPLDMCSIIAGVGSWACVSG*TMSLVK Trigger: CTTTACAAGAGACATGGTTCAGCCAGAAACACATGC...CCAACTTCCCACTCCAGCAATAATAGAGCACATGTCTAAAGGAGTGACAATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR GCA 90 bp | ATCAGGAGAATGGGAGGGAAGAGTGTGTTAGCGACATGGAGGACTGATGTGGCCAAAGCTCTTTTAAATTaGTTACATGCCCATTGTCAC | + |
Preference number: 2 (lower is better) Translates to: IRRMGGKSVLATWRTDVAKALLN*LHAHCH Trigger: GTGACAATGGGCATGTAAGCAATTTAAAAGAGCTTT...GGCCACATCAGTCCTCCATGTCGCTAACACACTCTTCCCTCCCATTCTCCTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR TCA 90 bp | GAGTCTGCGTTTGTCACCATTTCTGCTGTTCATTCTCTTTTCCTGAGATACACATCCAACTCTCAGCTGTaGAGAACACCTTGTCGTTTC | + |
Preference number: 2 (lower is better) Translates to: ESAFVTISAVHSLFLRYTSNSQL*RTPCRF Trigger: GAAACGACAAGGTGTTCTTCACAGCTGAGAGTTGGA...TGTGTATCTCAGGAAAAGAGAATGAACAGCAGAAATGGTGACAAACGCAGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR TCA 90 bp | CCCATTGTCACTCCTTTAGACATGTGCTCTATTATTGCTGGAGTGGGAAGTTGGTACTCTTTCCCTCCATaGTGCTGGTTATTTTCCATG | + |
Preference number: 2 (lower is better) Translates to: PIVTPLDMCSIIAGVGSWYSFPP*CWLFSM Trigger: CATGGAAAATAACCAGCATCATGGAGGGAAAGAGTA...CCAACTTCCCACTCCAGCAATAATAGAGCACATGTCTAAAGGAGTGACAATGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR GCA 90 bp | AAAGCTCTTTTAAATTGCTTACATGCCCATTGTCACTCCTTTAGACATGTGCTCCTTACTGCTCAGCCTTaGCAGTTCTGCTCTCTTGCC | + |
Preference number: 2 (lower is better) Translates to: KALLNCLHAHCHSFRHVLLTAQP*QFCSLA Trigger: GGCAAGAGAGCAGAACTGGCAAGGCTGAGCAGTAAG...GAGCACATGTCTAAAGGAGTGACAATGGGCATGTAAGCAATTTAAAAGAGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | GCTCTTTTAAATTGCTTACATGCCCATTGTCACTCCTTTAGACATGTGCTCTATCTTGCCTCAGGAGGCTaGCAGCTAAGGACAGAATCA | + |
Preference number: 2 (lower is better) Translates to: ALLNCLHAHCHSFRHVLYLASGG*QLRTES Trigger: TGATTCTGTCCTTAGCTGCCAGCCTCCTGAGGCAAG...ATAGAGCACATGTCTAAAGGAGTGACAATGGGCATGTAAGCAATTTAAAAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | TCATCCCACAGTGATTGGATTTGTCACCTAGAGACCAAGCTTTCAATGCATCAGGTGCTCTATTATTGCTaGAGTGGGAAGTTGGTGCAT | + |
Preference number: 2 (lower is better) Translates to: SSHSDWICHLETKLSMHQVLYYC*SGKLVH Trigger: ATGCACCAACTTCCCACTCCAGCAATAATAGAGCAC...CTGATGCATTGAAAGCTTGGTCTCTAGGTGACAAATCCAATCACTGTGGGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR TCA 90 bp | TCATCCCACAGTGATTGGATTTGTCACCTAGAGACCAAGCTTTCAATGCATCAGCATTCACGTCTGTACTaGGTTGTTGTGGATTTGGTT | + |
Preference number: 2 (lower is better) Translates to: SSHSDWICHLETKLSMHQHSRLY*VVVDLV Trigger: AACCAAATCCACAACAACTCAGTACAGACGTGAATG...CTGATGCATTGAAAGCTTGGTCTCTAGGTGACAAATCCAATCACTGTGGGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | AAAGCTCTTTTAAATTGCTTACATGCCCATTGTCACTCCTTTAGACATGTGCTCGAGACCTCGAGACCTTaGTGTCACTTGCTGACACAT | + |
Preference number: 2 (lower is better) Translates to: KALLNCLHAHCHSFRHVLETSRP*CHLLTH Trigger: ATGTGTCAGCAAGTGACACCAAGGTCTCGAGGTCTC...GAGCACATGTCTAAAGGAGTGACAATGGGCATGTAAGCAATTTAAAAGAGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | TCATCCCACAGTGATTGGATTTGTCACCTAGAGACCAAGCTTTCAATGCATCAGCATAGCATGTGTTTCTaGCTGAACCATGTCTCTTGT | + |
Preference number: 2 (lower is better) Translates to: SSHSDWICHLETKLSMHQHSMCF*LNHVSC Trigger: ACAAGAGACATGGTTCAGCCAGAAACACATGCTATG...CTGATGCATTGAAAGCTTGGTCTCTAGGTGACAAATCCAATCACTGTGGGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR TCA 90 bp | GTACTGAGTTGTTGTGGATTTGGTTTTCATGCTTGCATTATGTTATTTGGGTTTTCCTTTACCAACTTCTaGAGGAGCCTGGGGGTGTCA | + |
Preference number: 2 (lower is better) Translates to: VLSCCGFGFHACIMLFGFSFTNF*RSLGVS Trigger: TGACACCCCCAGGCTCCTTCAGAAGTTGGTAAAGGA...AAACCCAAATAACATAATGCAAGCATGAAAACCAAATCCACAACAACTCAGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR GCA 90 bp | AGGACTGATGTGGCCCAGCCACTGAGCAGATTAAGGCATATTAAATATAAGGCTATATTTCCAAGAGTCTaGGTTTGTCACCATTTCTGC | + |
Preference number: 2 (lower is better) Translates to: RTDVAQPLSRLRHIKYKAIFPRV*VCHHFC Trigger: GCAGAAATGGTGACAAACGCAGACTCTTGGAAATAT...AGCCTTATATTTAATATGCCTTAATCTGCTCAGTGGCTGGGCCACATCAGTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR GCA 90 bp | AGGACTGATGTGGCCCAGCCACTGAGCAGATTAAGGCATATTAAATATAAGGCTACTCCTTTAGACATGTaGTCTATTATTGCTGGAGTG | + |
Preference number: 2 (lower is better) Translates to: RTDVAQPLSRLRHIKYKATPLDM*SIIAGV Trigger: CACTCCAGCAATAATAGAGCACATGTCTAAAGGAGT...AGCCTTATATTTAATATGCCTTAATCTGCTCAGTGGCTGGGCCACATCAGTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | GTACTGAGTTGTTGTGGATTTGGTTTTCATGCTTGCATTATGTTATTTGGGTTTCATGTTGGCAGGTACTaGGGCCTGTGTGTTGGGTTT | + |
Preference number: 2 (lower is better) Translates to: VLSCCGFGFHACIMLFGFHVGRY*GLCVGF Trigger: AAACCCAACACACAGGCCCCAGTACCTGCCAACATG...AAACCCAAATAACATAATGCAAGCATGAAAACCAAATCCACAACAACTCAGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR CAA 90 bp | ATGGAGGGACTAGCTAGAATCCAACTCTCAGCTGTGAAGAACACCTaGTCGTTTCTAGAAAAAGTCCTTTTCCAATCCTTTAATCAGCTT | + |
Preference number: 2 (lower is better) Translates to: MEGLARIQLSAVKNT*SFLEKVLFQSFNQL Trigger: AAGCTGATTAAAGGATTGGAAAAGGACTTTTTCTAGAAACGACAAGGTGTTCTTCACAGCTGAGAGTTGGATTCTAGCTAGTCCCTCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | GCTCTTTTAAATTGCTTACATGCCCATTGTCACTCCTTTAGACATGTGCTCTATCATAGCATGTGTTTCTaGCTGAACCATGTCTCTTGT | + |
Preference number: 2 (lower is better) Translates to: ALLNCLHAHCHSFRHVLYHSMCF*LNHVSC Trigger: ACAAGAGACATGGTTCAGCCAGAAACACATGCTATG...ATAGAGCACATGTCTAAAGGAGTGACAATGGGCATGTAAGCAATTTAAAAGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR TCA 90 bp | GTACTGAGTTGTTGTGGATTTGGTTTTCATGCTTGCATTATGTTATTTGGGTTTCATTCACGTCTGTACTaGGTTGTTGTGGATTTGGTT | + |
Preference number: 2 (lower is better) Translates to: VLSCCGFGFHACIMLFGFHSRLY*VVVDLV Trigger: AACCAAATCCACAACAACTCAGTACAGACGTGAATG...AAACCCAAATAACATAATGCAAGCATGAAAACCAAATCCACAACAACTCAGTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | GTACTGAGTTGTTGTGGATTTGGTTTTCATGCTTGCATTATGTTATTTGGGTTTGCTGGTTATTTTCCATaGTTCTGCCTAGACTTACTG | + |
Preference number: 2 (lower is better) Translates to: VLSCCGFGFHACIMLFGFAGYFP*FCLDLL Trigger: CAGTAAGTCTAGGCAGAACCATGGAAAATAACCAGC...AAACCCAAATAACATAATGCAAGCATGAAAACCAAATCCACAACAACTCAGTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CCA 90 bp | GTACTGAGTTGTTGTGGATTTGGTTTTCATGCTTGCATTATGTTATTTGGGTTTTGTACTGAGTTGTTGTaGATTTGGTTTTCATGCTTG | + |
Preference number: 2 (lower is better) Translates to: VLSCCGFGFHACIMLFGFCTELL*IWFSCL Trigger: CAAGCATGAAAACCAAATCCACAACAACTCAGTACA...AAACCCAAATAACATAATGCAAGCATGAAAACCAAATCCACAACAACTCAGTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR TCA 72 bp | GCCACCTCCAACACACCATGTCTGCCAGCCTCTCTCTaGAGGCCGCCGCAGAAGCTGGACCCAAGACCTCCA | + |
Preference number: 3 (lower is better) Translates to: ATSNTPCLPASL*RPPQKLDPRPP Trigger: TGGAGGTCTTGGGTCCAGCTTCTGCGGCGGCCTTCAGAGAGAGGCTGGCAGACATGGTGTGTTGGAGGTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR CCA 72 bp | GTCTGCCAGCCTCTCTCTGAAGGCCGCCGCAGAAGCTaGACCCAAGACCTCCACTCTCCCTGCTCCCTTCAT | + |
Preference number: 3 (lower is better) Translates to: VCQPLSEGRRRS*TQDLHSPCSLH Trigger: ATGAAGGGAGCAGGGAGAGTGGAGGTCTTGGGTCCAGCTTCTGCGGCGGCCTTCAGAGAGAGGCTGGCAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR GCA 72 bp | GTTGCTGCTTCACGGTCTGAGGGTGCCACTGGCAGATaGAGAGGCCAGGCGAGACGAACTGGAACTTTTGGA | + |
Preference number: 3 (lower is better) Translates to: VAASRSEGATGR*RGQARRTGTFG Trigger: TCCAAAAGTTCCAGTTCGTCTCGCCTGGCCTCTGCATCTGCCAGTGGCACCCTCAGACCGTGAAGCAGCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226005.2 |
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3UTR-3UTR CAA 90 bp | GGGGCCAAGAATAAGACAGACTCTTCAGAGGACGAACTCTGGGACCTACTCCCTGCCAGTGGCCAATGGTaGGGCAGGGAGACAGAGACA | + |
Preference number: 3 (lower is better) Translates to: GAKNKTDSSEDELWDLLPASGQW*GRETET Trigger: TGTCTCTGTCTCCCTGCCCAACCATTGGCCACTGGC...AGGGAGTAGGTCCCAGAGTTCGTCCTCTGAAGAGTCTGTCTTATTCTTGGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR CCA 72 bp | AGAGTCATGGATCATGGCCCAGGAGAGCTGCAGGCCTaGATCCAGGGTGGCCAGGATGGAATACAGGTTTTG | + |
Preference number: 3 (lower is better) Translates to: RVMDHGPGELQA*IQGGQDGIQVL Trigger: CAAAACCTGTATTCCATCCTGGCCACCCTGGATCCAGGCCTGCAGCTCTCCTGGGCCATGATCCATGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR CCA 72 bp | TGCCACTGGCAGATGCAGAGGCCAGGCGAGACGAACTaGAACTTTTGGAGGGGAACTCAGGGAGATCTCAAC | + |
Preference number: 3 (lower is better) Translates to: CHWQMQRPGETN*NFWRGTQGDLN Trigger: GTTGAGATCTCCCTGAGTTCCCCTCCAAAAGTTCCAGTTCGTCTCGCCTGGCCTCTGCATCTGCCAGTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226005.2 |
||
3UTR-3UTR CAA 90 bp | TCTGAGAACGGAACTCATCAGGCCTACACAGGATGCTTTCTTTGGCTGAGGCATTGCTGGAGTGGGAAGTaGGTGCATGCGGCGGCCAGA | + |
Preference number: 3 (lower is better) Translates to: SENGTHQAYTGCFLWLRHCWSGK*VHAAAR Trigger: TCTGGCCGCCGCATGCACCAACTTCCCACTCCAGCA...ATGCCTCAGCCAAAGAAAGCATCCTGTGTAGGCCTGATGAGTTCCGTTCTCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
||
3UTR GCA 72 bp | GTTCTGCCTAGACTTACTGCTCAGCCTTGCCAGTTCTaGTCTCTTGCCTCAGGAGGCTGGCAGCTAAGGACA | + |
Preference number: 3 (lower is better) Translates to: VLPRLTAQPCQF*SLASGGWQLRT Trigger: TGTCCTTAGCTGCCAGCCTCCTGAGGCAAGAGAGCAGAACTGGCAAGGCTGAGCAGTAAGTCTAGGCAGAAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
||
3UTR CCA 72 bp | ACAGGTAGACTACCAACATGTAAGAGTCATGGATCATaGCCCAGGAGAGCTGCAGGCCTGGATCCAGGGTGG | + |
Preference number: 3 (lower is better) Translates to: TGRLPTCKSHGS*PRRAAGLDPGW Trigger: CCACCCTGGATCCAGGCCTGCAGCTCTCCTGGGCCATGATCCATGACTCTTACATGTTGGTAGTCTACCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
||
3UTR TCA 72 bp | ATAGCTAACGCCCTAAGCATCTCCTTTACCAACTTCTaGAGGAGCCTGGGGGTGTCATTCCCTTCCCAGGCC | + |
Preference number: 3 (lower is better) Translates to: IANALSISFTNF*RSLGVSFPSQA Trigger: GGCCTGGGAAGGGAATGACACCCCCAGGCTCCTTCAGAAGTTGGTAAAGGAGATGCTTAGGGCGTTAGCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
||
3UTR CCA 72 bp | AACGGAACTCATCAGGCCTACACAGGATGCTTTCTTTaGCTGAGGCATCTCCCTGGTACCAGCCCTGTACTC | + |
Preference number: 3 (lower is better) Translates to: NGTHQAYTGCFL*LRHLPGTSPVL Trigger: GAGTACAGGGCTGGTACCAGGGAGATGCCTCAGCCAAAGAAAGCATCCTGTGTAGGCCTGATGAGTTCCGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CAA 90 bp | ATCAGGAGAATGGGAGGGAAGAGTGTGTTAGCGACATGGAGGACTGATGTGGCCACTTACTGCTCAGCCTaGCCAGTTCTGCTCTCTTGC | + |
Preference number: 3 (lower is better) Translates to: IRRMGGKSVLATWRTDVATYCSA*PVLLSC Trigger: GCAAGAGAGCAGAACTGGCAAGGCTGAGCAGTAAGT...GGCCACATCAGTCCTCCATGTCGCTAACACACTCTTCCCTCCCATTCTCCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
||
3UTR TCA 72 bp | GAACTCATCAGGCCTACACAGGATGCTTTCTTTGGCTaGGGCATCTCCCTGGTACCAGCCCTGTACTCTTTC | + |
Preference number: 3 (lower is better) Translates to: ELIRPTQDAFFG*GISLVPALYSF Trigger: GAAAGAGTACAGGGCTGGTACCAGGGAGATGCCTCAGCCAAAGAAAGCATCCTGTGTAGGCCTGATGAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR TCA 72 bp | AGCAAGGAGCAGAAAGACAGAAGCCGAAAAGCAAGGTaGGTACGTGCACGGACTTTCCTGGAACTGCGCCTA | + |
Preference number: 3 (lower is better) Translates to: SKEQKDRSRKAR*VRARTFLELRL Trigger: TAGGCGCAGTTCCAGGAAAGTCCGTGCACGTACTCACCTTGCTTTTCGGCTTCTGTCTTTCTGCTCCTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
||
3UTR GCA 72 bp | GCCCATTGTCACTCCTTTAGACATGTGCTCTATTATTaGTGGAGTGGGAAGTTGGTGCATGCGGCGGCCAGA | + |
Preference number: 3 (lower is better) Translates to: AHCHSFRHVLYY*WSGKLVHAAAR Trigger: TCTGGCCGCCGCATGCACCAACTTCCCACTCCAGCAATAATAGAGCACATGTCTAAAGGAGTGACAATGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
||
3UTR CCA 72 bp | CAGGAAGATGGCCAATGGAGAGAGACCTCGAGACCTTaGTGTCACTTGCTGACACATCACCTCAGACTTCCA | + |
Preference number: 3 (lower is better) Translates to: QEDGQWRETSRP*CHLLTHHLRLP Trigger: TGGAAGTCTGAGGTGATGTGTCAGCAAGTGACACCAAGGTCTCGAGGTCTCTCTCCATTGGCCATCTTCCTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
||
3UTR CCA 72 bp | CTACACAGGATGCTTTCTTTGGCTGAGGCATCTCCCTaGTACCAGCCCTGTACTCTTTCCCTCCATGATGCT | + |
Preference number: 3 (lower is better) Translates to: LHRMLSLAEASP*YQPCTLSLHDA Trigger: AGCATCATGGAGGGAAAGAGTACAGGGCTGGTACCAGGGAGATGCCTCAGCCAAAGAAAGCATCCTGTGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
||
3UTR CCA 72 bp | TTAGACATGTGCTCTATTATTGCTGGAGTGGGAAGTTaGTGCATGCGGCGGCCAGAGGTCACCTTTCAGGAG | + |
Preference number: 3 (lower is better) Translates to: LDMCSIIAGVGS*CMRRPEVTFQE Trigger: CTCCTGAAAGGTGACCTCTGGCCGCCGCATGCACCAACTTCCCACTCCAGCAATAATAGAGCACATGTCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
||
3UTR CCA 72 bp | ATCAGGAGAATGGGAGGGAAGAGTGTGTTAGCGACATaGAGGACTGATGTGGCCCAGCCACTGAGCAGATTA | + |
Preference number: 3 (lower is better) Translates to: IRRMGGKSVLAT*RTDVAQPLSRL Trigger: TAATCTGCTCAGTGGCTGGGCCACATCAGTCCTCCATGTCGCTAACACACTCTTCCCTCCCATTCTCCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
||
3UTR-3UTR CAA 90 bp | GTGTGGGAGAGTGTAAGAGAGAAGAAGAGTTGGGTATCACTACTTCCCTCCCCAGACGAACTGGAACTTTaGGAGGGGAACTCAGGGAGA | + |
Preference number: 3 (lower is better) Translates to: VWESVREKKSWVSLLPSPDELEL*EGNSGR Trigger: TCTCCCTGAGTTCCCCTCCAAAAGTTCCAGTTCGTC...TGGGGAGGGAAGTAGTGATACCCAACTCTTCTTCTCTCTTACACTCTCCCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226005.2 |
||
3UTR TCA 72 bp | AATGGGAGGGAAGAGTGTGTTAGCGACATGGAGGACTaGTGTGGCCCAGCCACTGAGCAGATTAAGGCATAT | + |
Preference number: 3 (lower is better) Translates to: NGREECVSDMED*CGPATEQIKAY Trigger: ATATGCCTTAATCTGCTCAGTGGCTGGGCCACATCAGTCCTCCATGTCGCTAACACACTCTTCCCTCCCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
||
3UTR GCA 72 bp | AGGTATTATGGCTGGCCAGTGCCTGCACAGGGAACTTaGCATAACCATGCGACCCCAAGTTATGTACCAAAA | + |
Preference number: 3 (lower is better) Translates to: RYYGWPVPAQGT*HNHATPSYVPK Trigger: TTTTGGTACATAACTTGGGGTCGCATGGTTATGGCAAGTTCCCTGTGCAGGCACTGGCCAGCCATAATACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR GCA 72 bp | TTATTTGGCCACAGAAGAAACCAGAGCTCACTTTGTTaGAAACGGGGTGGAGCGTTAGATAGGAAGGGGCCA | + |
Preference number: 3 (lower is better) Translates to: LFGHRRNQSSLC*KRGGALDRKGP Trigger: TGGCCCCTTCCTATCTAACGCTCCACCCCGTTTGCAACAAAGTGAGCTCTGGTTTCTTCTGTGGCCAAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CAA 90 bp | GCTTGCATTATGTTATTTGGGTTTCCAGAATCACAGAACCCGCATGTCTGCATGCACAGGATGCTTTCTTaGGCTGAGGCATCTCCCTGG | + |
Preference number: 3 (lower is better) Translates to: ACIMLFGFPESQNPHVCMHRMLS*AEASPW Trigger: CCAGGGAGATGCCTCAGCCAAAGAAAGCATCCTGTG...CATGCAGACATGCGGGTTCTGTGATTCTGGAAACCCAAATAACATAATGCAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
||
3UTR GCA 72 bp | CATCTCTTTGGCACAAAGGATGATAAAGTTTCTCACTaGTGCCAGGTCCAGGGGCTTCAGCATCCTATCTTG | + |
Preference number: 3 (lower is better) Translates to: HLFGTKDDKVSH*CQVQGLQHPIL Trigger: CAAGATAGGATGCTGAAGCCCCTGGACCTGGCAGCAGTGAGAAACTTTATCATCCTTTGTGCCAAAGAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
||
3UTR GCA 72 bp | CTTTCCCTCCATGATGCTGGTTATTTTCCATGGTTCTaGCTAGACTTACTGCTCAGCCTTGCCAGTTCTGCT | + |
Preference number: 3 (lower is better) Translates to: LSLHDAGYFPWF*LDLLLSLASSA Trigger: AGCAGAACTGGCAAGGCTGAGCAGTAAGTCTAGGCAGAACCATGGAAAATAACCAGCATCATGGAGGGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
||
3UTR CCA 72 bp | GTCACCTTTCAGGAGTTAAGTTCTCTCCTTCCACCATaGTTTCTGAGAACGGAACTCATCAGGCCTACACAG | + |
Preference number: 3 (lower is better) Translates to: VTFQELSSLLPP*FLRTELIRPTQ Trigger: CTGTGTAGGCCTGATGAGTTCCGTTCTCAGAAACCATGGTGGAAGGAGAGAACTTAACTCCTGAAAGGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR CCA 72 bp | CTAGGTGCTGGATGTGTTAGGTCTTTGTTTCCATGTTaGCAGGTACTGGGGCCTGTGTGTTGGGTTTTAAGA | + |
Preference number: 3 (lower is better) Translates to: LGAGCVRSLFPC*QVLGPVCWVLR Trigger: TCTTAAAACCCAACACACAGGCCCCAGTACCTGCCAACATGGAAACAAAGACCTAACACATCCAGCACCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CAA 90 bp | TGGCCAGTGCCTGCACAGGGAACTTGCCATAACCATGCGACCCCAAGTTATGTAAACCCAAGATGTCTATaGCCATATTTCCAAGAGTCT | + |
Preference number: 3 (lower is better) Translates to: WPVPAQGTCHNHATPSYVNPRCL*PYFQES Trigger: AGACTCTTGGAAATATGGCAATAGACATCTTGGGTT...TACATAACTTGGGGTCGCATGGTTATGGCAAGTTCCCTGTGCAGGCACTGGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
||
3UTR-3UTR CAA 90 bp | GATAGGAAGGGGCCAAGAATAAGACAGACTCTTCAGAGGACGAACTCTGGGACCGTCTGTACTGAGTTGTaGTGGATTTGGTTTTCATGC | + |
Preference number: 3 (lower is better) Translates to: DRKGPRIRQTLQRTNSGTVCTEL*WIWFSC Trigger: GCATGAAAACCAAATCCACAACAACTCAGTACAGAC...GGTCCCAGAGTTCGTCCTCTGAAGAGTCTGTCTTATTCTTGGCCCCTTCCTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR CCA 72 bp | TTTTCTTCTAGTTCCAGATGGGTGACGCCAGGAGTGTaGGAGAGTGTAAGAGAGAAGAAGAGTTGGGTATCA | + |
Preference number: 3 (lower is better) Translates to: FSSSSRWVTPGV*ESVREKKSWVS Trigger: TGATACCCAACTCTTCTTCTCTCTTACACTCTCCCACACTCCTGGCGTCACCCATCTGGAACTAGAAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR CCA 72 bp | GACAGAATCACTAGTATCTTTTCTTCTAGTTCCAGATaGGTGACGCCAGGAGTGTGGGAGAGTGTAAGAGAG | + |
Preference number: 3 (lower is better) Translates to: DRITSIFSSSSR*VTPGVWESVRE Trigger: CTCTCTTACACTCTCCCACACTCCTGGCGTCACCCATCTGGAACTAGAAGAAAAGATACTAGTGATTCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CAA 90 bp | ATCCTGCCCCATAGCATGTGTTTCTGGCTGAACCATGTCTCTTGTAAAGCTACAGCTAATGCACTTCTATaGCAGAAACCACTCGATCTG | + |
Preference number: 3 (lower is better) Translates to: ILPHSMCFWLNHVSCKATANALL*QKPLDL Trigger: CAGATCGAGTGGTTTCTGCAATAGAAGTGCATTAGC...TGTAGCTTTACAAGAGACATGGTTCAGCCAGAAACACATGCTATGGGGCAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR TCA 72 bp | GGTAACTACATCGCAGAACAGCAGTTTCTGGGGAACTaGGATGGGTATATGGGTAGATGGTTGATTGTAGAA | + |
Preference number: 3 (lower is better) Translates to: GNYIAEQQFLGN*DGYMGRWLIVE Trigger: TTCTACAATCAACCATCTACCCATATACCCATCTCAGTTCCCCAGAAACTGCTGTTCTGCGATGTAGTTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR GCA 72 bp | TTCCAGTATTCAGACTGTGAGCTAATGCACTTCTATTaGAGAAACCACTCGATCTGTGCTATAGCTAACGCC | + |
Preference number: 3 (lower is better) Translates to: FQYSDCELMHFY*RNHSICAIANA Trigger: GGCGTTAGCTATAGCACAGATCGAGTGGTTTCTGCAATAGAAGTGCATTAGCTCACAGTCTGAATACTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR GCA 72 bp | ATTGCTTACATGCCCATTGTCACTCCTTTAGACATGTaGTCTATTATTGCTGGAGTGGGAAGTTGGTGCATG | + |
Preference number: 3 (lower is better) Translates to: IAYMPIVTPLDM*SIIAGVGSWCM Trigger: CATGCACCAACTTCCCACTCCAGCAATAATAGAGCACATGTCTAAAGGAGTGACAATGGGCATGTAAGCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CAA 90 bp | ATCCTGCCCCATAGCATGTGTTTCTGGCTGAACCATGTCTCTTGTAAAGCTACAAACCCAAGATGTCTATaGCCATATTTCCAAGAGTCT | + |
Preference number: 3 (lower is better) Translates to: ILPHSMCFWLNHVSCKATNPRCL*PYFQES Trigger: AGACTCTTGGAAATATGGCAATAGACATCTTGGGTT...TGTAGCTTTACAAGAGACATGGTTCAGCCAGAAACACATGCTATGGGGCAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR TCA 72 bp | TCTGGGAGCCTGTTACATGAACATTCACGTCTGTACTaGGTTGTTGTGGATTTGGTTTTCATGCTTGCATTA | + |
Preference number: 3 (lower is better) Translates to: SGSLLHEHSRLY*VVVDLVFMLAL Trigger: TAATGCAAGCATGAAAACCAAATCCACAACAACTCAGTACAGACGTGAATGTTCATGTAACAGGCTCCCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CAA 90 bp | GTACTGAGTTGTTGTGGATTTGGTTTTCATGCTTGCATTATGTTATTTGGGTTTGCTAATGCACTTCTATaGCAGAAACCACTCGATCTG | + |
Preference number: 3 (lower is better) Translates to: VLSCCGFGFHACIMLFGFANALL*QKPLDL Trigger: CAGATCGAGTGGTTTCTGCAATAGAAGTGCATTAGC...AAACCCAAATAACATAATGCAAGCATGAAAACCAAATCCACAACAACTCAGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR GCA 72 bp | CACGTCTGTACTGAGTTGTTGTGGATTTGGTTTTCATaGTTGCATTATGTTATTTGGGTTTCCAGAATCACA | + |
Preference number: 3 (lower is better) Translates to: HVCTELLWIWFS*LHYVIWVSRIT Trigger: TGTGATTCTGGAAACCCAAATAACATAATGCAAGCATGAAAACCAAATCCACAACAACTCAGTACAGACGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR GCA 72 bp | TCTGTACTGAGTTGTTGTGGATTTGGTTTTCATGCTTaGATTATGTTATTTGGGTTTCCAGAATCACAGAAC | + |
Preference number: 3 (lower is better) Translates to: SVLSCCGFGFHA*IMLFGFPESQN Trigger: GTTCTGTGATTCTGGAAACCCAAATAACATAATGCAAGCATGAAAACCAAATCCACAACAACTCAGTACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR-3UTR CAA 90 bp | GTACTGAGTTGTTGTGGATTTGGTTTTCATGCTTGCATTATGTTATTTGGGTTTCTTGCATTATGTTATTaGGGTTTCCAGAATCACAGA | + |
Preference number: 3 (lower is better) Translates to: VLSCCGFGFHACIMLFGFLALCY*GFQNHR Trigger: TCTGTGATTCTGGAAACCCAAATAACATAATGCAAG...AAACCCAAATAACATAATGCAAGCATGAAAACCAAATCCACAACAACTCAGTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR GCA 90 bp | CACACCATGTCTGCCAGCCTCTCTCTGAAGGCCGCCGCAGAAGCTGGACCCAAGGGTGCCACTGGCAGATaGAGAGGCCAGGCGAGACGA | + |
Preference number: 4 (lower is better) Translates to: HTMSASLSLKAAAEAGPKGATGR*RGQARR Trigger: TCGTCTCGCCTGGCCTCTGCATCTGCCAGTGGCACC...CTTGGGTCCAGCTTCTGCGGCGGCCTTCAGAGAGAGGCTGGCAGACATGGTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224629.2 |
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CDS-3UTR CCA 90 bp | CACACCATGTCTGCCAGCCTCTCTCTGAAGGCCGCCGCAGAAGCTGGACCCAAGTTGAGCATCCAGAGCTaGTCCAACTCAGCCAAGCTC | + |
Preference number: 4 (lower is better) Translates to: HTMSASLSLKAAAEAGPKLSIQS*SNSAKL Trigger: GAGCTTGGCTGAGTTGGACCAGCTCTGGATGCTCAA...CTTGGGTCCAGCTTCTGCGGCGGCCTTCAGAGAGAGGCTGGCAGACATGGTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR TCA 90 bp | GTGTGGGAGAGTGTAAGAGAGAAGAAGAGTTGGGTATCACTACTTCCCTCCCCACTCGCAGCTGGCGCTTaGAGTCTGGGGTCACTTCGC | + |
Preference number: 4 (lower is better) Translates to: VWESVREKKSWVSLLPSPLAAGA*SLGSLR Trigger: GCGAAGTGACCCCAGACTTCAAGCGCCAGCTGCGAG...TGGGGAGGGAAGTAGTGATACCCAACTCTTCTTCTCTCTTACACTCTCCCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR GCA 90 bp | CACACCATGTCTGCCAGCCTCTCTCTGAAGGCCGCCGCAGAAGCTGGACCCAAGGTACTCATCTTTGTCTaGATTTTGGGGCCATCGATG | + |
Preference number: 4 (lower is better) Translates to: HTMSASLSLKAAAEAGPKVLIFV*ILGPSM Trigger: CATCGATGGCCCCAAAATGCAGACAAAGATGAGTAC...CTTGGGTCCAGCTTCTGCGGCGGCCTTCAGAGAGAGGCTGGCAGACATGGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR CAA 72 bp | GAACGGAACTCATCAGGCCTACACAGGATGCTTTCTTaGGCTGAGGCATCTCCCTGGTACCAGCCCTGTACT | + |
Preference number: 4 (lower is better) Translates to: ERNSSGLHRMLS*AEASPWYQPCT Trigger: AGTACAGGGCTGGTACCAGGGAGATGCCTCAGCCAAAGAAAGCATCCTGTGTAGGCCTGATGAGTTCCGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR TCA 90 bp | CCCATTGTCACTCCTTTAGACATGTGCTCTATTATTGCTGGAGTGGGAAGTTGGCTCGCAGCTGGCGCTTaGAGTCTGGGGTCACTTCGC | + |
Preference number: 4 (lower is better) Translates to: PIVTPLDMCSIIAGVGSWLAAGA*SLGSLR Trigger: GCGAAGTGACCCCAGACTTCAAGCGCCAGCTGCGAG...CCAACTTCCCACTCCAGCAATAATAGAGCACATGTCTAAAGGAGTGACAATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR TCA 90 bp | GGACCCAAGACCTCCACTCTCCCTGCTCCCTTCATCTCTTTGGCACAAAGGATGATGACTGTGCTTTCCTaGGCCTGGCTCTGTCTTGAA | + |
Preference number: 4 (lower is better) Translates to: GPKTSTLPAPFISLAQRMMTVLS*AWLCLE Trigger: TTCAAGACAGAGCCAGGCTCAGGAAAGCACAGTCAT...CATCCTTTGTGCCAAAGAGATGAAGGGAGCAGGGAGAGTGGAGGTCTTGGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR TCA 90 bp | GGACCCAAGACCTCCACTCTCCCTGCTCCCTTCATCTCTTTGGCACAAAGGATGACTCAGGGAGATCAATaGCTGTGCTTTCCTGAGCCT | + |
Preference number: 4 (lower is better) Translates to: GPKTSTLPAPFISLAQRMTQGDQ*LCFPEP Trigger: AGGCTCAGGAAAGCACAGTCATTGATCTCCCTGAGT...CATCCTTTGTGCCAAAGAGATGAAGGGAGCAGGGAGAGTGGAGGTCTTGGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224629.2 |
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3UTR CAA 72 bp | ACAGGAAGATGGCCAATGGAGAGAGACCTCGAGACCTaGGTGTCACTTGCTGACACATCACCTCAGACTTCC | + |
Preference number: 4 (lower is better) Translates to: TGRWPMERDLET*VSLADTSPQTS Trigger: GGAAGTCTGAGGTGATGTGTCAGCAAGTGACACCAAGGTCTCGAGGTCTCTCTCCATTGGCCATCTTCCTGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR TCA 90 bp | GGACCCAAGACCTCCACTCTCCCTGCTCCCTTCATCTCTTTGGCACAAAGGATGTTGCCAGGAATTGGCTaGACATCGGCAGTTGTGAAT | + |
Preference number: 4 (lower is better) Translates to: GPKTSTLPAPFISLAQRMLPGIG*TSAVVN Trigger: ATTCACAACTGCCGATGTTCAGCCAATTCCTGGCAA...CATCCTTTGTGCCAAAGAGATGAAGGGAGCAGGGAGAGTGGAGGTCTTGGGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR TCA 90 bp | AGCATTGGGGTGGGTAGCAAGGAGCATGTGTTCCACCACAGGGGAGATAAGAGTATGACTGTGCTTTCCTaGGCCTGGCTCTGTCTTGAA | + |
Preference number: 4 (lower is better) Translates to: SIGVGSKEHVFHHRGDKSMTVLS*AWLCLE Trigger: TTCAAGACAGAGCCAGGCTCAGGAAAGCACAGTCAT...ACTCTTATCTCCCCTGTGGTGGAACACATGCTCCTTGCTACCCACCCCAATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR CCA 90 bp | TGCTTTCTTTGGCTGAGGCATCTCCCTGGTACCAGCCCTGTACTCTTTCCCTCCGCCATCGATGCTTTTTaGAGGTGCAAAGGCCATCAT | + |
Preference number: 4 (lower is better) Translates to: CFLWLRHLPGTSPVLFPSAIDAF*RCKGHH Trigger: ATGATGGCCTTTGCACCTCCAAAAAGCATCGATGGC...GGAGGGAAAGAGTACAGGGCTGGTACCAGGGAGATGCCTCAGCCAAAGAAAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR CCA 90 bp | ATGCTTTCTTTGGCTGAGGCATCTCCCTGGTACCAGCCCTGTACTCTTTCCCTCGCCATCGATGCTTTTTaGAGGTGCAAAGGCCATCAT | + |
Preference number: 4 (lower is better) Translates to: MLSLAEASPWYQPCTLSLAIDAF*RCKGHH Trigger: ATGATGGCCTTTGCACCTCCAAAAAGCATCGATGGC...GAGGGAAAGAGTACAGGGCTGGTACCAGGGAGATGCCTCAGCCAAAGAAAGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR CCA 90 bp | ATCAGGAGAATGGGAGGGAAGAGTGTGTTAGCGACATGGAGGACTGATGTGGCCAGAATTGCCAGGAATTaGCTGAACATCGGCAGTTGT | + |
Preference number: 4 (lower is better) Translates to: IRRMGGKSVLATWRTDVARIARN*LNIGSC Trigger: ACAACTGCCGATGTTCAGCCAATTCCTGGCAATTCT...GGCCACATCAGTCCTCCATGTCGCTAACACACTCTTCCCTCCCATTCTCCTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR TCA 90 bp | GTGTGGGAGAGTGTAAGAGAGAAGAAGAGTTGGGTATCACTACTTCCCTCCCCAGAACATCGGCAGTTGTaGATTCATCCTTTGGAGGTG | + |
Preference number: 4 (lower is better) Translates to: VWESVREKKSWVSLLPSPEHRQL*IHPLEV Trigger: CACCTCCAAAGGATGAATTCACAACTGCCGATGTTC...TGGGGAGGGAAGTAGTGATACCCAACTCTTCTTCTCTCTTACACTCTCCCACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR GCA 90 bp | GTTCTGCTCTCTTGCCTCAGGAGGCTGGCAGCTAAGGACAGAATCACTAGTATCGTACTCATCTTTGTCTaGATTTTGGGGCCATCGATG | + |
Preference number: 4 (lower is better) Translates to: VLLSCLRRLAAKDRITSIVLIFV*ILGPSM Trigger: CATCGATGGCCCCAAAATGCAGACAAAGATGAGTAC...GATACTAGTGATTCTGTCCTTAGCTGCCAGCCTCCTGAGGCAAGAGAGCAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR GCA 90 bp | GTTCTGCTCTCTTGCCTCAGGAGGCTGGCAGCTAAGGACAGAATCACTAGTATCTCTCATCTGGAGAATTaGCAGGAATTGGCTGAACAT | + |
Preference number: 4 (lower is better) Translates to: VLLSCLRRLAAKDRITSISHLEN*QELAEH Trigger: ATGTTCAGCCAATTCCTGGCAATTCTCCAGATGAGA...GATACTAGTGATTCTGTCCTTAGCTGCCAGCCTCCTGAGGCAAGAGAGCAGAAC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
||
CDS-3UTR CCA 90 bp | GTGTGGGAGAGTGTAAGAGAGAAGAAGAGTTGGGTATCACTACTTCCCTCCCCAAGAATTGCCAGGAATTaGCTGAACATCGGCAGTTGT | + |
Preference number: 4 (lower is better) Translates to: VWESVREKKSWVSLLPSPRIARN*LNIGSC Trigger: ACAACTGCCGATGTTCAGCCAATTCCTGGCAATTCT...TGGGGAGGGAAGTAGTGATACCCAACTCTTCTTCTCTCTTACACTCTCCCACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR TCA 90 bp | GATAGGAAGGGGCCAAGAATAAGACAGACTCTTCAGAGGACGAACTCTGGGACCAGCCTGGCTCTGTCTTaGAGCTTATTTTTCTTATCT | + |
Preference number: 4 (lower is better) Translates to: DRKGPRIRQTLQRTNSGTSLALS*SLFFLS Trigger: AGATAAGAAAAATAAGCTTCAAGACAGAGCCAGGCT...GGTCCCAGAGTTCGTCCTCTGAAGAGTCTGTCTTATTCTTGGCCCCTTCCTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
||
CDS-3UTR GCA 90 bp | GTGTGGGAGAGTGTAAGAGAGAAGAAGAGTTGGGTATCACTACTTCCCTCCCCATCTCATCTGGAGAATTaGCAGGAATTGGCTGAACAT | + |
Preference number: 4 (lower is better) Translates to: VWESVREKKSWVSLLPSPSHLEN*QELAEH Trigger: ATGTTCAGCCAATTCCTGGCAATTCTCCAGATGAGA...TGGGGAGGGAAGTAGTGATACCCAACTCTTCTTCTCTCTTACACTCTCCCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR TCA 90 bp | TCGAGACCTTGGTGTCACTTGCTGACACATCACCTCAGACTTCCAGTATTCAGAAGAATTCTTCTCCTTTaGGAGTCTGTCCATTTGTCA | + |
Preference number: 4 (lower is better) Translates to: SRPWCHLLTHHLRLPVFRRILLL*ESVHLS Trigger: TGACAAATGGACAGACTCTCAAAGGAGAAGAATTCT...TCTGAATACTGGAAGTCTGAGGTGATGTGTCAGCAAGTGACACCAAGGTCTCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
||
CDS-3UTR CCA 90 bp | ATCCTGCCCCATAGCATGTGTTTCTGGCTGAACCATGTCTCTTGTAAAGCTACATCTTTGTCTGCATTTTaGGGCCATCGATGCTTTTTG | + |
Preference number: 4 (lower is better) Translates to: ILPHSMCFWLNHVSCKATSLSAF*GHRCFL Trigger: CAAAAAGCATCGATGGCCCCAAAATGCAGACAAAGA...TGTAGCTTTACAAGAGACATGGTTCAGCCAGAAACACATGCTATGGGGCAGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR CCA 90 bp | TCATCCCACAGTGATTGGATTTGTCACCTAGAGACCAAGCTTTCAATGCATCAGTGTGAATTCATCCTTTaGAGGTGTCTTGGGCTTGGT | + |
Preference number: 4 (lower is better) Translates to: SSHSDWICHLETKLSMHQCEFIL*RCLGLG Trigger: ACCAAGCCCAAGACACCTCCAAAGGATGAATTCACA...CTGATGCATTGAAAGCTTGGTCTCTAGGTGACAAATCCAATCACTGTGGGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR CCA 90 bp | AGGACTGATGTGGCCCAGCCACTGAGCAGATTAAGGCATATTAAATATAAGGCTTGTGAATTCATCCTTTaGAGGTGTCTTGGGCTTGGT | + |
Preference number: 4 (lower is better) Translates to: RTDVAQPLSRLRHIKYKACEFIL*RCLGLG Trigger: ACCAAGCCCAAGACACCTCCAAAGGATGAATTCACA...AGCCTTATATTTAATATGCCTTAATCTGCTCAGTGGCTGGGCCACATCAGTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR CCA 90 bp | AGGACTGATGTGGCCCAGCCACTGAGCAGATTAAGGCATATTAAATATAAGGCTTCTTTGTCTGCATTTTaGGGCCATCGATGCTTTTTG | + |
Preference number: 4 (lower is better) Translates to: RTDVAQPLSRLRHIKYKASLSAF*GHRCFL Trigger: CAAAAAGCATCGATGGCCCCAAAATGCAGACAAAGA...AGCCTTATATTTAATATGCCTTAATCTGCTCAGTGGCTGGGCCACATCAGTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR TCA 90 bp | GCTTGCATTATGTTATTTGGGTTTCCAGAATCACAGAACCCGCATGTCTGCATGAGAATTCTTCTCCTTTaGGAGTCTGTCCATTTGTCA | + |
Preference number: 4 (lower is better) Translates to: ACIMLFGFPESQNPHVCMRILLL*ESVHLS Trigger: TGACAAATGGACAGACTCTCAAAGGAGAAGAATTCT...CATGCAGACATGCGGGTTCTGTGATTCTGGAAACCCAAATAACATAATGCAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR GCA 90 bp | GCTCTTTTAAATTGCTTACATGCCCATTGTCACTCCTTTAGACATGTGCTCTATGCTAAGGAAGGGGACTaGTTCTCATCTGGAGAATTG | + |
Preference number: 4 (lower is better) Translates to: ALLNCLHAHCHSFRHVLYAKEGD*FSSGEL Trigger: CAATTCTCCAGATGAGAAGCAGTCCCCTTCCTTAGC...ATAGAGCACATGTCTAAAGGAGTGACAATGGGCATGTAAGCAATTTAAAAGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR CAA 72 bp | GTTGTGGATTTGGTTTTCATGCTTGCATTATGTTATTaGGGTTTCCAGAATCACAGAACCCGCATGTCTGCA | + |
Preference number: 4 (lower is better) Translates to: VVDLVFMLALCY*GFQNHRTRMSA Trigger: TGCAGACATGCGGGTTCTGTGATTCTGGAAACCCAAATAACATAATGCAAGCATGAAAACCAAATCCACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR TCA 90 bp | CTTTTAAATTGCTTACATGCCCATTGTCACTCCTTTAGACATGTGCTCTATTATGAACATCGGCAGTTGTaGATTCATCCTTTGGAGGTG | + |
Preference number: 4 (lower is better) Translates to: LLNCLHAHCHSFRHVLYYEHRQL*IHPLEV Trigger: CACCTCCAAAGGATGAATTCACAACTGCCGATGTTC...ATAATAGAGCACATGTCTAAAGGAGTGACAATGGGCATGTAAGCAATTTAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR CAA 72 bp | CTAGCTAGAATCCAACTCTCAGCTGTGAAGAACACCTaGTCGTTTCTAGAAAAAGTCCTTTTCCAATCCTTT | + |
Preference number: 4 (lower is better) Translates to: LARIQLSAVKNT*SFLEKVLFQSF Trigger: AAAGGATTGGAAAAGGACTTTTTCTAGAAACGACAAGGTGTTCTTCACAGCTGAGAGTTGGATTCTAGCTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR CAA 72 bp | GGAGCCTGTTACATGAACATTCACGTCTGTACTGAGTaGTTGTGGATTTGGTTTTCATGCTTGCATTATGTT | + |
Preference number: 4 (lower is better) Translates to: GACYMNIHVCTE*LWIWFSCLHYV Trigger: AACATAATGCAAGCATGAAAACCAAATCCACAACAACTCAGTACAGACGTGAATGTTCATGTAACAGGCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR CAA 72 bp | GTCTGTACTGAGTTGTTGTGGATTTGGTTTTCATGCTaGCATTATGTTATTTGGGTTTCCAGAATCACAGAA | + |
Preference number: 4 (lower is better) Translates to: VCTELLWIWFSC*HYVIWVSRITE Trigger: TTCTGTGATTCTGGAAACCCAAATAACATAATGCAAGCATGAAAACCAAATCCACAACAACTCAGTACAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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3UTR CAA 72 bp | GCCTGTTACATGAACATTCACGTCTGTACTGAGTTGTaGTGGATTTGGTTTTCATGCTTGCATTATGTTATT | + |
Preference number: 4 (lower is better) Translates to: ACYMNIHVCTEL*WIWFSCLHYVI Trigger: AATAACATAATGCAAGCATGAAAACCAAATCCACAACAACTCAGTACAGACGTGAATGTTCATGTAACAGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR TCA 90 bp | CTTTTAAATTGCTTACATGCCCATTGTCACTCCTTTAGACATGTGCTCTATTATAGCCTGGCTCTGTCTTaGAGCTTATTTTTCTTATCT | + |
Preference number: 4 (lower is better) Translates to: LLNCLHAHCHSFRHVLYYSLALS*SLFFLS Trigger: AGATAAGAAAAATAAGCTTCAAGACAGAGCCAGGCT...ATAATAGAGCACATGTCTAAAGGAGTGACAATGGGCATGTAAGCAATTTAAAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR CAA 90 bp | ATGCTTTCTTTGGCTGAGGCATCTCCCTGGTACCAGCCCTGTACTCTTTCCCTCGGCCATCGATGCTTTTaGGAGGTGCAAAGGCCATCA | + |
Preference number: 5 (lower is better) Translates to: MLSLAEASPWYQPCTLSLGHRCF*EVQRPS Trigger: TGATGGCCTTTGCACCTCCAAAAAGCATCGATGGCC...GAGGGAAAGAGTACAGGGCTGGTACCAGGGAGATGCCTCAGCCAAAGAAAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR CAA 90 bp | ATGCTTTCTTTGGCTGAGGCATCTCCCTGGTACCAGCCCTGTACTCTTTCCCTCGACGAACTGGAACTTTaGGAGGGGAACTCAGGGAGA | + |
Preference number: 5 (lower is better) Translates to: MLSLAEASPWYQPCTLSLDELEL*EGNSGR Trigger: TCTCCCTGAGTTCCCCTCCAAAAGTTCCAGTTCGTC...GAGGGAAAGAGTACAGGGCTGGTACCAGGGAGATGCCTCAGCCAAAGAAAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224629.2 |
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CDS CCA 90 bp | CATCTGGATGTAGTGCTTTTTCCAGACGCCCTGTTCAAAGGGCGTTaGGGAGAAGCTGATGTACCAGTTGAAGCGCAGGCACTTGAGCAT | + |
Preference number: 5 (lower is better) Translates to: HLDVVLFPDALFKGR*GEADVPVEAQALEH Trigger: ATGCTCAAGTGCCTGCGCTTCAACTGGTACATCAGCTTCTCCCCAACGCCCTTTGAACAGGGCGTCTGGAAAAAGCACTACATCCAGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000169656.3 ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS TCA 90 bp | AAGGAAGGGGACTGCTTCTCATCTGGAGAATTGCCAGGAATTGGCTaGACATCGGCAGTTGTGAATTCATCCTTTGGAGGTGTCTTGGGC | + |
Preference number: 5 (lower is better) Translates to: KEGDCFSSGELPGIG*TSAVVNSSFGGVLG Trigger: GCCCAAGACACCTCCAAAGGATGAATTCACAACTGCCGATGTTCAGCCAATTCCTGGCAATTCTCCAGATGAGAAGCAGTCCCCTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169656.3 ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR CAA 90 bp | TGCCTAGACTTACTGCTCAGCCTTGCCAGTTCTGCTCTCTTGCCTCAGGAGGCTATCTTTGTCTGCATTTaGGGGCCATCGATGCTTTTT | + |
Preference number: 5 (lower is better) Translates to: CLDLLLSLASSALLPQEAIFVCI*GPSMLF Trigger: AAAAAGCATCGATGGCCCCAAAATGCAGACAAAGAT...AGCCTCCTGAGGCAAGAGAGCAGAACTGGCAAGGCTGAGCAGTAAGTCTAGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR CAA 90 bp | GTGTGGGAGAGTGTAAGAGAGAAGAAGAGTTGGGTATCACTACTTCCCTCCCCAACCACAGGTCTCTCCTaGATGGCAATGACTGTGCTT | + |
Preference number: 5 (lower is better) Translates to: VWESVREKKSWVSLLPSPTTGLS*MAMTVL Trigger: AAGCACAGTCATTGCCATCAAGGAGAGACCTGTGGT...TGGGGAGGGAAGTAGTGATACCCAACTCTTCTTCTCTCTTACACTCTCCCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226005.2 |
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CDS TCA 90 bp | GGCGAGACGAACTGGAACTTTTGGAGGGGAACTCAGGGAGATCAATaGCTGTGCTTTCCTGAGCCTGGCTCTGTCTTGAAGCTTATTTTT | + |
Preference number: 5 (lower is better) Translates to: GETNWNFWRGTQGDQ*LCFPEPGSVLKLIF Trigger: AAAAATAAGCTTCAAGACAGAGCCAGGCTCAGGAAAGCACAGTCATTGATCTCCCTGAGTTCCCCTCCAAAAGTTCCAGTTCGTCTCGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224629.2 |
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CDS-3UTR CAA 90 bp | ATGCTTTCTTTGGCTGAGGCATCTCCCTGGTACCAGCCCTGTACTCTTTCCCTCATCTTTGTCTGCATTTaGGGGCCATCGATGCTTTTT | + |
Preference number: 5 (lower is better) Translates to: MLSLAEASPWYQPCTLSLIFVCI*GPSMLF Trigger: AAAAAGCATCGATGGCCCCAAAATGCAGACAAAGAT...GAGGGAAAGAGTACAGGGCTGGTACCAGGGAGATGCCTCAGCCAAAGAAAGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR CAA 90 bp | GCTTGCATTATGTTATTTGGGTTTCCAGAATCACAGAACCCGCATGTCTGCATGGGCCATCGATGCTTTTaGGAGGTGCAAAGGCCATCA | + |
Preference number: 5 (lower is better) Translates to: ACIMLFGFPESQNPHVCMGHRCF*EVQRPS Trigger: TGATGGCCTTTGCACCTCCAAAAAGCATCGATGGCC...CATGCAGACATGCGGGTTCTGTGATTCTGGAAACCCAAATAACATAATGCAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS TCA 90 bp | GAGCTCTTCGTTCTTCAAATACCTGGTCATTCAGAAGCTGATGGTTaGGAGGTGTCCAGGTACTCATCTTTGTCTGCATTTTGGGGCCAT | + |
Preference number: 5 (lower is better) Translates to: ELFVLQIPGHSEADG*EVSRYSSLSAFWGH Trigger: ATGGCCCCAAAATGCAGACAAAGATGAGTACCTGGACACCTCTCAACCATCAGCTTCTGAATGACCAGGTATTTGAAGAACGAAGAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000169656.3 ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS TCA 90 bp | GACAGGGAACAGCGCTCTAGTAGGCCTGTAAGAATTCTTCTCCTTTaGGAGTCTGTCCATTTGTCAAACCATTTTCCCAGCAGAGCTCTT | + |
Preference number: 5 (lower is better) Translates to: DREQRSSRPVRILLL*ESVHLSNHFPSRAL Trigger: AAGAGCTCTGCTGGGAAAATGGTTTGACAAATGGACAGACTCTCAAAGGAGAAGAATTCTTACAGGCCTACTAGAGCGCTGTTCCCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169656.3 ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS-3UTR CAA 90 bp | GTGTGGGAGAGTGTAAGAGAGAAGAAGAGTTGGGTATCACTACTTCCCTCCCCAGAGCCTGGCTCTGTCTaGAAGCTTATTTTTCTTATC | + |
Preference number: 5 (lower is better) Translates to: VWESVREKKSWVSLLPSPEPGSV*KLIFLI Trigger: GATAAGAAAAATAAGCTTCAAGACAGAGCCAGGCTC...TGGGGAGGGAAGTAGTGATACCCAACTCTTCTTCTCTCTTACACTCTCCCACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS TCA 90 bp | AATTTCCTGATTGCGGGAGGAGTGTTCTGTAAGCAGACTCACCAATaGCTGTGCTTTCCTGAGCCTGGCTCTGTCTTGAAGCTTATTTTT | + |
Preference number: 5 (lower is better) Translates to: NFLIAGGVFCKQTHQ*LCFPEPGSVLKLIF Trigger: AAAAATAAGCTTCAAGACAGAGCCAGGCTCAGGAAAGCACAGTCATTGGTGAGTCTGCTTACAGAACACTCCTCCCGCAATCAGGAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169656.3 |
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CDS TCA 90 bp | ACAAATTCAATTTCACAAATAGGATTAAGGATCAGGGTAATTTCCTaGTTGCGGGAGGAGTGTTCTGTAAGCAGACTCACCAATGACTGT | + |
Preference number: 5 (lower is better) Translates to: TNSISQIGLRIRVIS*LREECSVSRLTNDC Trigger: ACAGTCATTGGTGAGTCTGCTTACAGAACACTCCTCCCGCAATCAGGAAATTACCCTGATCCTTAATCCTATTTGTGAAATTGAATTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169656.3 |
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CDS CAA 90 bp | CAGACGCCCTGTTCAAAGGGCGTTGGGGAGAAGCTGATGTACCAGTaGAAGCGCAGGCACTTGAGCATCCAGAGCTGGTCCAACTCAGCC | + |
Preference number: 6 (lower is better) Translates to: QTPCSKGVGEKLMYQ*KRRHLSIQSWSNSA Trigger: GGCTGAGTTGGACCAGCTCTGGATGCTCAAGTGCCTGCGCTTCAACTGGTACATCAGCTTCTCCCCAACGCCCTTTGAACAGGGCGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169656.3 ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS GCA 72 bp | CAACTCAGCCAAGCTCTTCCAGTACCAGCTCACCTGTaGACAACGGCAAAGACTCCGGGGATCCAGGAAGGA | + |
Preference number: 6 (lower is better) Translates to: QLSQALPVPAHL*TTAKTPGIQEG Trigger: TCCTTCCTGGATCCCCGGAGTCTTTGCCGTTGTGCACAGGTGAGCTGGTACTGGAAGAGCTTGGCTGAGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169656.3 ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS CAA 72 bp | GGGGAGAAGCTGATGTACCAGTTGAAGCGCAGGCACTaGAGCATCCAGAGCTGGTCCAACTCAGCCAAGCTC | + |
Preference number: 6 (lower is better) Translates to: GEKLMYQLKRRH*SIQSWSNSAKL Trigger: GAGCTTGGCTGAGTTGGACCAGCTCTGGATGCTCAAGTGCCTGCGCTTCAACTGGTACATCAGCTTCTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169656.3 ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS CAA 90 bp | AAGGGCGTTGGGGAGAAGCTGATGTACCAGTTGAAGCGCAGGCACTaGAGCATCCAGAGCTGGTCCAACTCAGCCAAGCTCTTCCAGTAC | + |
Preference number: 6 (lower is better) Translates to: KGVGEKLMYQLKRRH*SIQSWSNSAKLFQY Trigger: GTACTGGAAGAGCTTGGCTGAGTTGGACCAGCTCTGGATGCTCAAGTGCCTGCGCTTCAACTGGTACATCAGCTTCTCCCCAACGCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169656.3 ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS CAA 72 bp | TGTTCAAAGGGCGTTGGGGAGAAGCTGATGTACCAGTaGAAGCGCAGGCACTTGAGCATCCAGAGCTGGTCC | + |
Preference number: 6 (lower is better) Translates to: CSKGVGEKLMYQ*KRRHLSIQSWS Trigger: GGACCAGCTCTGGATGCTCAAGTGCCTGCGCTTCAACTGGTACATCAGCTTCTCCCCAACGCCCTTTGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169656.3 ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS CCA 72 bp | GTAGTGCTTTTTCCAGACGCCCTGTTCAAAGGGCGTTaGGGAGAAGCTGATGTACCAGTTGAAGCGCAGGCA | + |
Preference number: 6 (lower is better) Translates to: VVLFPDALFKGR*GEADVPVEAQA Trigger: TGCCTGCGCTTCAACTGGTACATCAGCTTCTCCCCAACGCCCTTTGAACAGGGCGTCTGGAAAAAGCACTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000169656.3 ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS CAA 72 bp | GCAGATGCAGAGGCCAGGCGAGACGAACTGGAACTTTaGGAGGGGAACTCAGGGAGATCAATGACTGTGCTT | + |
Preference number: 6 (lower is better) Translates to: ADAEARRDELEL*EGNSGRSMTVL Trigger: AAGCACAGTCATTGATCTCCCTGAGTTCCCCTCCAAAAGTTCCAGTTCGTCTCGCCTGGCCTCTGCATCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224629.2 |
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CDS TCA 72 bp | ATTGCGGGAGGAGTGTTCTGTAAGCAGACTCACCAATaGCTGTGCTTTCCTGAGCCTGGCTCTGTCTTGAAG | + |
Preference number: 6 (lower is better) Translates to: IAGGVFCKQTHQ*LCFPEPGSVLK Trigger: CTTCAAGACAGAGCCAGGCTCAGGAAAGCACAGTCATTGGTGAGTCTGCTTACAGAACACTCCTCCCGCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169656.3 |
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CDS TCA 72 bp | ATAATTAAAGCGGATGATGTCAGTGGGATGCTTATCTaGCGATCGCCAAGGTGGAAGCTCTTTCTCCCCGGG | + |
Preference number: 6 (lower is better) Translates to: IIKADDVSGMLI*RSPRWKLFLPG Trigger: CCCGGGGAGAAAGAGCTTCCACCTTGGCGATCGTCAGATAAGCATCCCACTGACATCATCCGCTTTAATTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169656.3 ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS TCA 72 bp | AACTGGAACTTTTGGAGGGGAACTCAGGGAGATCAATaGCTGTGCTTTCCTGAGCCTGGCTCTGTCTTGAAG | + |
Preference number: 6 (lower is better) Translates to: NWNFWRGTQGDQ*LCFPEPGSVLK Trigger: CTTCAAGACAGAGCCAGGCTCAGGAAAGCACAGTCATTGATCTCCCTGAGTTCCCCTCCAAAAGTTCCAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224629.2 |
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CDS CAA 72 bp | TTGAGAGGTGTCCAGGTACTCATCTTTGTCTGCATTTaGGGGCCATCGATGCTTTTTGGAGGTGCAAAGGCC | + |
Preference number: 6 (lower is better) Translates to: LRGVQVLIFVCI*GPSMLFGGAKA Trigger: GGCCTTTGCACCTCCAAAAAGCATCGATGGCCCCAAAATGCAGACAAAGATGAGTACCTGGACACCTCTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000169656.3 ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS CCA 72 bp | AGGGGACTGCTTCTCATCTGGAGAATTGCCAGGAATTaGCTGAACATCGGCAGTTGTGAATTCATCCTTTGG | + |
Preference number: 6 (lower is better) Translates to: RGLLLIWRIARN*LNIGSCEFILW Trigger: CCAAAGGATGAATTCACAACTGCCGATGTTCAGCCAATTCCTGGCAATTCTCCAGATGAGAAGCAGTCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169656.3 ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS TCA 72 bp | GACTGCTTCTCATCTGGAGAATTGCCAGGAATTGGCTaGACATCGGCAGTTGTGAATTCATCCTTTGGAGGT | + |
Preference number: 6 (lower is better) Translates to: DCFSSGELPGIG*TSAVVNSSFGG Trigger: ACCTCCAAAGGATGAATTCACAACTGCCGATGTTCAGCCAATTCCTGGCAATTCTCCAGATGAGAAGCAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169656.3 ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS TCA 72 bp | GCTCTTCGTTCTTCAAATACCTGGTCATTCAGAAGCTaGTGGTTGAGAGGTGTCCAGGTACTCATCTTTGTC | + |
Preference number: 6 (lower is better) Translates to: ALRSSNTWSFRS*WLRGVQVLIFV Trigger: GACAAAGATGAGTACCTGGACACCTCTCAACCATCAGCTTCTGAATGACCAGGTATTTGAAGAACGAAGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169656.3 ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS TCA 72 bp | CAGCGCTCTAGTAGGCCTGTAAGAATTCTTCTCCTTTaGGAGTCTGTCCATTTGTCAAACCATTTTCCCAGC | + |
Preference number: 6 (lower is better) Translates to: QRSSRPVRILLL*ESVHLSNHFPS Trigger: GCTGGGAAAATGGTTTGACAAATGGACAGACTCTCAAAGGAGAAGAATTCTTACAGGCCTACTAGAGCGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169656.3 ENSMUST00000224629.2 ENSMUST00000226005.2 |
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CDS TCA 72 bp | ATTTCACAAATAGGATTAAGGATCAGGGTAATTTCCTaGTTGCGGGAGGAGTGTTCTGTAAGCAGACTCACC | + |
Preference number: 6 (lower is better) Translates to: ISQIGLRIRVIS*LREECSVSRLT Trigger: GGTGAGTCTGCTTACAGAACACTCCTCCCGCAATCAGGAAATTACCCTGATCCTTAATCCTATTTGTGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169656.3 |