Pregenerated sensors for FBXO15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034391Ensembl transcript IDs: ENSMUST00000037718.10, ENSMUST00000223789.3, ENSMUST00000224467.3, ENSMUST00000225015.2, ENSMUST00000225445.2
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGTCCCGAAAGCTGTTGCCTGTATCTGGGATATGTTCTTCTAGCTaGGCTGCCTTGTCTGGCCTCAGTGCCAGAGCAGGGGAACTCATG | + |
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Preference number: 1 (lower is better) Translates to: LSRKLLPVSGICSSS*AALSGLSARAGELM Trigger: CATGAGTTCCCCTGCTCTGGCACTGAGGCCAGACAAGGCAGCCCAGCTAGAAGAACATATCCCAGATACAGGCAACAGCTTTCGGGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225445.2 |
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| 3UTR GCA 90 bp | GGTCTTCATGTGGGTCTGTCTGGGGGAAGCTGTCCCGAAAGCTGTTaGCTGTATCTGGGATATGTTCTTCTAGCTGGGCTGCCTTGTCTG | + |
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Preference number: 1 (lower is better) Translates to: GLHVGLSGGSCPESC*LYLGYVLLAGLPCL Trigger: CAGACAAGGCAGCCCAGCTAGAAGAACATATCCCAGATACAGGCAACAGCTTTCGGGACAGCTTCCCCCAGACAGACCCACATGAAGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225445.2 |
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| 3UTR TCA 90 bp | GTCAGAGGTCTGCACTTTTCAAAGTTCAAAACTTCACATGAAATATaGATGAAGGGAGAATGGCACCATGCTAACAGAAGAGATCACCCC | + |
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Preference number: 1 (lower is better) Translates to: VRGLHFSKFKTSHEI*MKGEWHHANRRDHP Trigger: GGGGTGATCTCTTCTGTTAGCATGGTGCCATTCTCCCTTCATTCATATTTCATGTGAAGTTTTGAACTTTGAAAAGTGCAGACCTCTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225445.2 |
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| 3UTR CAA 90 bp | AAGCTGTTGCCTGTATCTGGGATATGTTCTTCTAGCTGGGCTGCCTaGTCTGGCCTCAGTGCCAGAGCAGGGGAACTCATGGGGACCCCC | + |
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Preference number: 2 (lower is better) Translates to: KLLPVSGICSSSWAA*SGLSARAGELMGTP Trigger: GGGGGTCCCCATGAGTTCCCCTGCTCTGGCACTGAGGCCAGACAAGGCAGCCCAGCTAGAAGAACATATCCCAGATACAGGCAACAGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225445.2 |
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| 3UTR-3UTR GCA 90 bp | CTCACATACCAGATGGGCTTCTTGTCCTCATCCAGCAAGGTCATATCCACTACATCGTGTCCTCACCCCTaGATAAGACCAAGGCGCTTG | + |
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Preference number: 2 (lower is better) Translates to: LTYQMGFLSSSSKVISTTSCPHP*IRPRRL Trigger: CAAGCGCCTTGGTCTTATGCAGGGGTGAGGACACGA...TGTAGTGGATATGACCTTGCTGGATGAGGACAAGAAGCCCATCTGGTATGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225015.2 |
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| 3UTR CAA 90 bp | GCAGATCTCAAGCACACTGGAGAACTCACATACCAGATGGGCTTCTaGTCCTCATCCAGCAAGGTCATATCCACTACAATGCAACTCGTG | + |
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Preference number: 2 (lower is better) Translates to: ADLKHTGELTYQMGF*SSSSKVISTTMQLV Trigger: CACGAGTTGCATTGTAGTGGATATGACCTTGCTGGATGAGGACAAGAAGCCCATCTGGTATGTGAGTTCTCCAGTGTGCTTGAGATCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225015.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAGAACTCACATACCAGATGGGCTTCTTGTCCTCATCCAGCAAGGTCATATCAACTGTGGGAGGAAGTaGTTGGGAGGGGACAATGAT | + |
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Preference number: 2 (lower is better) Translates to: WRTHIPDGLLVLIQQGHINCGRK*LGGDND Trigger: ATCATTGTCCCCTCCCAATCACTTCCTCCCACAGTT...GATATGACCTTGCTGGATGAGGACAAGAAGCCCATCTGGTATGTGAGTTCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225445.2 |
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| 3UTR CAA 90 bp | GCAGATCTCAAGCACACTGGAGAACTCACATACCAGATGGGCTTCTaGTCCTCATCCAGCAAGGTCATATCCACTACAATGCAACTCTCA | + |
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Preference number: 2 (lower is better) Translates to: ADLKHTGELTYQMGF*SSSSKVISTTMQLS Trigger: TGAGAGTTGCATTGTAGTGGATATGACCTTGCTGGATGAGGACAAGAAGCCCATCTGGTATGTGAGTTCTCCAGTGTGCTTGAGATCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225445.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAGAACTCACATACCAGATGGGCTTCTTGTCCTCATCCAGCAAGGTCATATCAACTCACATACCAGATaGGCTTCTTGTCCTCATCCA | + |
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Preference number: 2 (lower is better) Translates to: WRTHIPDGLLVLIQQGHINSHTR*ASCPHP Trigger: TGGATGAGGACAAGAAGCCCATCTGGTATGTGAGTT...GATATGACCTTGCTGGATGAGGACAAGAAGCCCATCTGGTATGTGAGTTCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000225015.2 ENSMUST00000225445.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTCAAGCACACTGGAGAACTCACATACCAGATGGGCTTCTTGTCCTCATCCAAACTCACATACCAGATaGGCTTCTTGTCCTCATCCA | + |
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Preference number: 2 (lower is better) Translates to: ISSTLENSHTRWASCPHPNSHTR*ASCPHP Trigger: TGGATGAGGACAAGAAGCCCATCTGGTATGTGAGTT...TGGATGAGGACAAGAAGCCCATCTGGTATGTGAGTTCTCCAGTGTGCTTGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000225015.2 ENSMUST00000225445.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAGAACTCACATACCAGATGGGCTTCTTGTCCTCATCCAGCAAGGTCATATCAGCAAATGTGCTGATTaGTCTTCATGTGGGTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: WRTHIPDGLLVLIQQGHISKCAD*SSCGSV Trigger: GACAGACCCACATGAAGACCAATCAGCACATTTGCT...GATATGACCTTGCTGGATGAGGACAAGAAGCCCATCTGGTATGTGAGTTCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225445.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAGTAAGGTAGGCCTCACCATGGAAGGCAACATACTTGGAAAGAACCATCCAACAGAGTCAGAGGTCTaGACTTTTCAAAGTTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: FSKVGLTMEGNILGKNHPTESEV*TFQSSK Trigger: TTTTGAACTTTGAAAAGTGCAGACCTCTGACTCTGT...TGGATGGTTCTTTCCAAGTATGTTGCCTTCCATGGTGAGGCCTACCTTACTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225445.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAGACTCCCTACTGCTAACTCAGCATTTATTGCCTCCCAAACCATTGTTGTAAGATCTCAAGCACACTaGAGAACTCACATACCAGAT | + |
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Preference number: 2 (lower is better) Translates to: TRLPTANSAFIASQTIVVRSQAH*RTHIPD Trigger: ATCTGGTATGTGAGTTCTCCAGTGTGCTTGAGATCT...TACAACAATGGTTTGGGAGGCAATAAATGCTGAGTTAGCAGTAGGGAGTCTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000225015.2 ENSMUST00000225445.2 |
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| 3UTR-3UTR TCA 90 bp | TTACTAATAACAAGACTCCCTACTGCTAACTCAGCATTTATTGCCTCCCAAACCACTTCACATGAAATATaGATGAAGGGAGAATGGCAC | + |
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Preference number: 2 (lower is better) Translates to: LLITRLPTANSAFIASQTTSHEI*MKGEWH Trigger: GTGCCATTCTCCCTTCATTCATATTTCATGTGAAGT...GGTTTGGGAGGCAATAAATGCTGAGTTAGCAGTAGGGAGTCTTGTTATTAGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225445.2 |
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| 3UTR GCA 72 bp | GTGGGTCTGTCTGGGGGAAGCTGTCCCGAAAGCTGTTaGCTGTATCTGGGATATGTTCTTCTAGCTGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: VGLSGGSCPESC*LYLGYVLLAGL Trigger: CAGCCCAGCTAGAAGAACATATCCCAGATACAGGCAACAGCTTTCGGGACAGCTTCCCCCAGACAGACCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225445.2 |
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| 3UTR CCA 72 bp | CAGGCCTCCCTGCACATGTGTAGCAAATGTGCTGATTaGTCTTCATGTGGGTCTGTCTGGGGGAAGCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: QASLHMCSKCAD*SSCGSVWGKLS Trigger: GGACAGCTTCCCCCAGACAGACCCACATGAAGACCAATCAGCACATTTGCTACACATGTGCAGGGAGGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225445.2 |
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| 3UTR GCA 72 bp | CTGTATGAGTATGCACAGACTGGACCCAGGCCTCCCTaGACATGTGTAGCAAATGTGCTGATTGGTCTTCAT | + |
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Preference number: 3 (lower is better) Translates to: LYEYAQTGPRPP*TCVANVLIGLH Trigger: ATGAAGACCAATCAGCACATTTGCTACACATGTGCAGGGAGGCCTGGGTCCAGTCTGTGCATACTCATACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225445.2 |
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| 3UTR CCA 72 bp | CAGATCTCAAGCACACTGGAGAACTCACATACCAGATaGGCTTCTTGTCCTCATCCAGCAAGGTCATATCCA | + |
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Preference number: 3 (lower is better) Translates to: QISSTLENSHTR*ASCPHPARSYP Trigger: TGGATATGACCTTGCTGGATGAGGACAAGAAGCCCATCTGGTATGTGAGTTCTCCAGTGTGCTTGAGATCTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000225015.2 ENSMUST00000225445.2 |
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| 3UTR-3UTR CAA 90 bp | ACAAGACTCCCTACTGCTAACTCAGCATTTATTGCCTCCCAAACCATTGTTGTATACCAGATGGGCTTCTaGTCCTCATCCAGCAAGGTC | + |
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Preference number: 3 (lower is better) Translates to: TRLPTANSAFIASQTIVVYQMGF*SSSSKV Trigger: GACCTTGCTGGATGAGGACAAGAAGCCCATCTGGTA...TACAACAATGGTTTGGGAGGCAATAAATGCTGAGTTAGCAGTAGGGAGTCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000225015.2 ENSMUST00000225445.2 |
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| 3UTR-3UTR CAA 90 bp | ATAACAAGACTCCCTACTGCTAACTCAGCATTTATTGCCTCCCAAACCATTGTTTACCAGATGGGCTTCTaGTCCTCATCCAGCAAGGTC | + |
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Preference number: 3 (lower is better) Translates to: ITRLPTANSAFIASQTIVYQMGF*SSSSKV Trigger: GACCTTGCTGGATGAGGACAAGAAGCCCATCTGGTA...AACAATGGTTTGGGAGGCAATAAATGCTGAGTTAGCAGTAGGGAGTCTTGTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000225015.2 ENSMUST00000225445.2 |
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| 3UTR TCA 72 bp | ATGCAGCTGAAAGCCTTTATCTCCATAAAAGGTCATTaGGTCTGGGTAGTTATCCACAAATGTAGTGTCGGG | + |
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Preference number: 3 (lower is better) Translates to: MQLKAFISIKGH*VWVVIHKCSVG Trigger: CCCGACACTACATTTGTGGATAACTACCCAGACTCAATGACCTTTTATGGAGATAAAGGCTTTCAGCTGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225445.2 |
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| 3UTR CAA 72 bp | TGTGGGTCTGTCTGGGGGAAGCTGTCCCGAAAGCTGTaGCCTGTATCTGGGATATGTTCTTCTAGCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: CGSVWGKLSRKL*PVSGICSSSWA Trigger: AGCCCAGCTAGAAGAACATATCCCAGATACAGGCAACAGCTTTCGGGACAGCTTCCCCCAGACAGACCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225445.2 |
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| CDS-3UTR GCA 90 bp | TCACATACCAGATGGGCTTCTTGTCCTCATCCAGCAAGGTCATATCCACTACAAAGTCCACCATTCTCCTaGCACAGCCCCACCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SHTRWASCPHPARSYPLQSPPFS*HSPTRR Trigger: CCTCCTGGTGGGGCTGTGGCAGGAGAATGGTGGACT...TTGTAGTGGATATGACCTTGCTGGATGAGGACAAGAAGCCCATCTGGTATGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225445.2 |
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| CDS-3UTR GCA 90 bp | TGGAGAACTCACATACCAGATGGGCTTCTTGTCCTCATCCAGCAAGGTCATATCTGCTCACACATCCAATaGACACCAAGGTCACCGCAT | + |
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Preference number: 4 (lower is better) Translates to: WRTHIPDGLLVLIQQGHICSHIQ*TPRSPH Trigger: ATGCGGTGACCTTGGTGTGCATTGGATGTGTGAGCA...GATATGACCTTGCTGGATGAGGACAAGAAGCCCATCTGGTATGTGAGTTCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225445.2 |
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| 3UTR CAA 72 bp | AAGCACACTGGAGAACTCACATACCAGATGGGCTTCTaGTCCTCATCCAGCAAGGTCATATCCACTACAATG | + |
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Preference number: 4 (lower is better) Translates to: KHTGELTYQMGF*SSSSKVISTTM Trigger: CATTGTAGTGGATATGACCTTGCTGGATGAGGACAAGAAGCCCATCTGGTATGTGAGTTCTCCAGTGTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000225015.2 ENSMUST00000225445.2 |
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| CDS-3UTR CCA 90 bp | AATTGTTTCAGTAAGGTAGGCCTCACCATGGAAGGCAACATACTTGGAAAGAACGCAAGCTCAGACTTGTaGCTGTTTCCTCCACTGAAG | + |
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Preference number: 4 (lower is better) Translates to: NCFSKVGLTMEGNILGKNASSDL*LFPPLK Trigger: CTTCAGTGGAGGAAACAGCCACAAGTCTGAGCTTGC...GTTCTTTCCAAGTATGTTGCCTTCCATGGTGAGGCCTACCTTACTGAAACAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225445.2 |
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| CDS-3UTR GCA 90 bp | CTCACATACCAGATGGGCTTCTTGTCCTCATCCAGCAAGGTCATATCCACTACAACGGAAAGATTCGAATaGTGCATGATGTGTTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: LTYQMGFLSSSSKVISTTTERFE*CMMCSL Trigger: CAAAGAACACATCATGCAGCATTCGAATCTTTCCGT...TGTAGTGGATATGACCTTGCTGGATGAGGACAAGAAGCCCATCTGGTATGTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225445.2 |
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| CDS-3UTR TCA 90 bp | TTCAGTAAGGTAGGCCTCACCATGGAAGGCAACATACTTGGAAAGAACCATCCAGGCTGCTTTCACAGATaGGATCTGCTTTGTAATATA | + |
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Preference number: 4 (lower is better) Translates to: FSKVGLTMEGNILGKNHPGCFHR*DLLCNI Trigger: TATATTACAAAGCAGATCTCATCTGTGAAAGCAGCC...TGGATGGTTCTTTCCAAGTATGTTGCCTTCCATGGTGAGGCCTACCTTACTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225445.2 |
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| CDS-3UTR TCA 90 bp | CTCACATACCAGATGGGCTTCTTGTCCTCATCCAGCAAGGTCATATCCACTACAAATGAATATTTGCCATaGCAAAAGCTAGTCCACCAT | + |
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Preference number: 4 (lower is better) Translates to: LTYQMGFLSSSSKVISTTNEYLP*QKLVHH Trigger: ATGGTGGACTAGCTTTTGTCATGGCAAATATTCATT...TGTAGTGGATATGACCTTGCTGGATGAGGACAAGAAGCCCATCTGGTATGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225445.2 |
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| CDS-3UTR GCA 90 bp | TTCAGTAAGGTAGGCCTCACCATGGAAGGCAACATACTTGGAAAGAACCATCCAAATGATAAAAGCGTCTaGTCACACATCCAATGCACA | + |
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Preference number: 4 (lower is better) Translates to: FSKVGLTMEGNILGKNHPNDKSV*SHIQCT Trigger: TGTGCATTGGATGTGTGAGCAGACGCTTTTATCATT...TGGATGGTTCTTTCCAAGTATGTTGCCTTCCATGGTGAGGCCTACCTTACTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225445.2 |
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| CDS-3UTR GCA 90 bp | ATCTCAAGCACACTGGAGAACTCACATACCAGATGGGCTTCTTGTCCTCATCCATTAGGGCCTTTATACTaGTCCATAAAAATTGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: ISSTLENSHTRWASCPHPLGPLY*SIKIGV Trigger: CACACCAATTTTTATGGAGCAGTATAAAGGCCCTAA...TGGATGAGGACAAGAAGCCCATCTGGTATGTGAGTTCTCCAGTGTGCTTGAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225445.2 |
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| CDS-3UTR GCA 90 bp | ACAAGACTCCCTACTGCTAACTCAGCATTTATTGCCTCCCAAACCATTGTTGTAAGAGATTGTGGAAGGTaGTACACAGGAAGTAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: TRLPTANSAFIASQTIVVRDCGR*YTGSKS Trigger: AGACTTACTTCCTGTGTAGCACCTTCCACAATCTCT...TACAACAATGGTTTGGGAGGCAATAAATGCTGAGTTAGCAGTAGGGAGTCTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225015.2 |
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| CDS-3UTR TCA 90 bp | CTAATAACAAGACTCCCTACTGCTAACTCAGCATTTATTGCCTCCCAAACCATTTTCTTTATCCCAAACTaGCAGCAAGCTCAGACTTGT | + |
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Preference number: 4 (lower is better) Translates to: LITRLPTANSAFIASQTIFFIPN*QQAQTC Trigger: ACAAGTCTGAGCTTGCTGTCAGTTTGGGATAAAGAA...AATGGTTTGGGAGGCAATAAATGCTGAGTTAGCAGTAGGGAGTCTTGTTATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225445.2 |
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| CDS-3UTR TCA 90 bp | CATGCTAATATATTAGAAGACACCCACTGGAACAGAGTCAGAGGTCTGCACTTTAAAAGGCCATGGGAATaGATATTTGCCATGACAAAA | + |
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Preference number: 4 (lower is better) Translates to: HANILEDTHWNRVRGLHFKRPWE*IFAMTK Trigger: TTTTGTCATGGCAAATATTCATTCCCATGGCCTTTT...AAAGTGCAGACCTCTGACTCTGTTCCAGTGGGTGTCTTCTAATATATTAGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225445.2 |
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| CDS TCA 90 bp | CTTCTCGCTGTGCTGGTTTCGCCAGGCATGCTGCTTCGTGACAGATaGGCCTCTAACAAACTTACTTCTAAAACTGAACCCGGAGCGCCC | + |
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Preference number: 5 (lower is better) Translates to: LLAVLVSPGMLLRDR*ASNKLTSKTEPGAP Trigger: GGGCGCTCCGGGTTCAGTTTTAGAAGTAAGTTTGTTAGAGGCTCATCTGTCACGAAGCAGCATGCCTGGCGAAACCAGCACAGCGAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223789.3 |
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| CDS GCA 90 bp | TCCAGGGATATAGAACTGATGGAGGAAGAGCAACGCTTCTCGCTGTaGTGGTTTCGCCAGGCATGCTGCTTCGTGACAGATGAGCCTCTA | + |
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Preference number: 5 (lower is better) Translates to: SRDIELMEEEQRFSL*WFRQACCFVTDEPL Trigger: TAGAGGCTCATCTGTCACGAAGCAGCATGCCTGGCGAAACCAGCACAGCGAGAAGCGTTGCTCTTCCTCCATCAGTTCTATATCCCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037718.10 ENSMUST00000223789.3 |
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| CDS-3UTR CAA 90 bp | GAACTCACATACCAGATGGGCTTCTTGTCCTCATCCAGCAAGGTCATATCCACTCTCCTGCAGAAGAGATaGTGGAAGGTGCTACACAGG | + |
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Preference number: 5 (lower is better) Translates to: ELTYQMGFLSSSSKVISTLLQKR*WKVLHR Trigger: CCTGTGTAGCACCTTCCACAATCTCTTCTGCAGGAG...AGTGGATATGACCTTGCTGGATGAGGACAAGAAGCCCATCTGGTATGTGAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225015.2 |
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| CDS TCA 90 bp | CTTCTCGCTGTGCTGGTTTCGCCAGGCATGCTGCTTCGTGACAGATaGGCCTCTAACAAACTTACTTCTAAAAATCTCCAATTCCGACTC | + |
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Preference number: 5 (lower is better) Translates to: LLAVLVSPGMLLRDR*ASNKLTSKNLQFRL Trigger: GAGTCGGAATTGGAGATTTTTAGAAGTAAGTTTGTTAGAGGCTCATCTGTCACGAAGCAGCATGCCTGGCGAAACCAGCACAGCGAGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037718.10 |
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| CDS-3UTR CAA 90 bp | CTAATAACAAGACTCCCTACTGCTAACTCAGCATTTATTGCCTCCCAAACCATTACAGGACTGAGGCTGTaGGTGAGGGCTGCTTTCACA | + |
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Preference number: 5 (lower is better) Translates to: LITRLPTANSAFIASQTITGLRL*VRAAFT Trigger: TGTGAAAGCAGCCCTCACCAACAGCCTCAGTCCTGT...AATGGTTTGGGAGGCAATAAATGCTGAGTTAGCAGTAGGGAGTCTTGTTATTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225445.2 |
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| CDS TCA 90 bp | ATAGTGTCTGAGCCCATTATGCTTCTCTCGAAAAGGCCATGGGAATaGATATTTGCCATGACAAAAGCTAGTCCACCATTCTCCTGCCAC | + |
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Preference number: 5 (lower is better) Translates to: IVSEPIMLLSKRPWE*IFAMTKASPPFSCH Trigger: GTGGCAGGAGAATGGTGGACTAGCTTTTGTCATGGCAAATATTCATTCCCATGGCCTTTTCGAGAGAAGCATAATGGGCTCAGACACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037718.10 ENSMUST00000223789.3 ENSMUST00000224467.3 ENSMUST00000225445.2 |
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| CDS GCA 90 bp | GATTGTCATCAGCCAAATGATAAAAGCGTCTGCTCACACATCCAATaGACACCAAGGTCACCGCATCCAAGTAAGAAAGTATCTTCACCA | + |
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Preference number: 5 (lower is better) Translates to: DCHQPNDKSVCSHIQ*TPRSPHPSKKVSSP Trigger: TGGTGAAGATACTTTCTTACTTGGATGCGGTGACCTTGGTGTGCATTGGATGTGTGAGCAGACGCTTTTATCATTTGGCTGATGACAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037718.10 ENSMUST00000223789.3 ENSMUST00000224467.3 ENSMUST00000225445.2 |
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| CDS-3UTR CAA 90 bp | ACAAGACTCCCTACTGCTAACTCAGCATTTATTGCCTCCCAAACCATTGTTGTATGCATGATGTGTTCTTaGCCACTGGCTTCTCTTAAG | + |
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Preference number: 5 (lower is better) Translates to: TRLPTANSAFIASQTIVVCMMCS*PLASLK Trigger: CTTAAGAGAAGCCAGTGGCAAAGAACACATCATGCA...TACAACAATGGTTTGGGAGGCAATAAATGCTGAGTTAGCAGTAGGGAGTCTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225445.2 |
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| CDS TCA 72 bp | GTGCTGGTTTCGCCAGGCATGCTGCTTCGTGACAGATaGGCCTCTAACAAACTTACTTCTAAAACTGAACCC | + |
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Preference number: 6 (lower is better) Translates to: VLVSPGMLLRDR*ASNKLTSKTEP Trigger: GGGTTCAGTTTTAGAAGTAAGTTTGTTAGAGGCTCATCTGTCACGAAGCAGCATGCCTGGCGAAACCAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223789.3 |
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| CDS CAA 90 bp | CTTAAGATGATTGTCCAACCTAAGCCAGATATTCTGAGGGACTCTTaGGTTTTCGAAGGAAGGCTTGTGCGGCGTTTGACAGGACTGAGG | + |
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Preference number: 6 (lower is better) Translates to: LKMIVQPKPDILRDS*VFEGRLVRRLTGLR Trigger: CCTCAGTCCTGTCAAACGCCGCACAAGCCTTCCTTCGAAAACCAAAGAGTCCCTCAGAATATCTGGCTTAGGTTGGACAATCATCTTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037718.10 ENSMUST00000223789.3 ENSMUST00000224467.3 ENSMUST00000225445.2 |
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| CDS TCA 72 bp | TTCTCTCGAAAAGGCCATGGGAATGAATATTTGCCATaGCAAAAGCTAGTCCACCATTCTCCTGCCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: FSRKGHGNEYLP*QKLVHHSPATA Trigger: GGCTGTGGCAGGAGAATGGTGGACTAGCTTTTGTCATGGCAAATATTCATTCCCATGGCCTTTTCGAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037718.10 ENSMUST00000223789.3 ENSMUST00000224467.3 ENSMUST00000225445.2 |
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| CDS GCA 72 bp | CAGCCAAATGATAAAAGCGTCTGCTCACACATCCAATaGACACCAAGGTCACCGCATCCAAGTAAGAAAGTA | + |
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Preference number: 6 (lower is better) Translates to: QPNDKSVCSHIQ*TPRSPHPSKKV Trigger: TACTTTCTTACTTGGATGCGGTGACCTTGGTGTGCATTGGATGTGTGAGCAGACGCTTTTATCATTTGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037718.10 ENSMUST00000223789.3 ENSMUST00000224467.3 ENSMUST00000225445.2 |
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| CDS GCA 72 bp | ACAGTGACAGAGTTGTCATTTACGGAAAGATTCGAATaGTGCATGATGTGTTCTTTGCCACTGGCTTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: TVTELSFTERFE*CMMCSLPLASL Trigger: AAGAGAAGCCAGTGGCAAAGAACACATCATGCAGCATTCGAATCTTTCCGTAAATGACAACTCTGTCACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037718.10 ENSMUST00000223789.3 ENSMUST00000224467.3 ENSMUST00000225445.2 |
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| CDS CAA 90 bp | GAGTTGTCATTTACGGAAAGATTCGAATGCTGCATGATGTGTTCTTaGCCACTGGCTTCTCTTAAGATGATTGTCCAACCTAAGCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: ELSFTERFECCMMCS*PLASLKMIVQPKPD Trigger: ATCTGGCTTAGGTTGGACAATCATCTTAAGAGAAGCCAGTGGCAAAGAACACATCATGCAGCATTCGAATCTTTCCGTAAATGACAACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037718.10 ENSMUST00000223789.3 ENSMUST00000224467.3 ENSMUST00000225445.2 |
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| CDS CAA 72 bp | TTTACGGAAAGATTCGAATGCTGCATGATGTGTTCTTaGCCACTGGCTTCTCTTAAGATGATTGTCCAACCT | + |
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Preference number: 6 (lower is better) Translates to: FTERFECCMMCS*PLASLKMIVQP Trigger: AGGTTGGACAATCATCTTAAGAGAAGCCAGTGGCAAAGAACACATCATGCAGCATTCGAATCTTTCCGTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037718.10 ENSMUST00000223789.3 ENSMUST00000224467.3 ENSMUST00000225445.2 |
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| CDS CAA 90 bp | ACACAGAATACCCGAACATGTCTGTCGCAGCCAATCATAGCAGACTaGCGTAAATTACTCAGATCGTACTTTTCAATTAAAGACAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: TQNTRTCLSQPIIAD*RKLLRSYFSIKDSH Trigger: ATGGCTGTCTTTAATTGAAAAGTACGATCTGAGTAATTTACGCAAGTCTGCTATGATTGGCTGCGACAGACATGTTCGGGTATTCTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037718.10 ENSMUST00000223789.3 ENSMUST00000224467.3 ENSMUST00000225445.2 |
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| CDS CAA 72 bp | ACCCGAACATGTCTGTCGCAGCCAATCATAGCAGACTaGCGTAAATTACTCAGATCGTACTTTTCAATTAAA | + |
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Preference number: 6 (lower is better) Translates to: TRTCLSQPIIAD*RKLLRSYFSIK Trigger: TTTAATTGAAAAGTACGATCTGAGTAATTTACGCAAGTCTGCTATGATTGGCTGCGACAGACATGTTCGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037718.10 ENSMUST00000223789.3 ENSMUST00000224467.3 ENSMUST00000225445.2 |
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