Pregenerated sensors for FBXL8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033313Ensembl transcript IDs: ENSMUST00000036221.12, ENSMUST00000126923.2
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCCGCGGCACTCCAAGCGCAGGCCTCGGAGCCTTGGGGCTCGGCTaGCCAGAGCGGTCAGCAGCTCGGTGGCCGTTCCGCGGCTGGGCT | + |
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Preference number: 1 (lower is better) Translates to: LRGTPSAGLGALGLG*PERSAARWPFRGWA Trigger: AGCCCAGCCGCGGAACGGCCACCGAGCTGCTGACCGCTCTGGCCAGCCGAGCCCCAAGGCTCCGAGGCCTGCGCTTGGAGTGCCGCGGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR CCA 90 bp | AAGCGGTTTCTCTCCGCGGCACTCCAAGCGCAGGCCTCGGAGCCTTaGGGCTCGGCTGGCCAGAGCGGTCAGCAGCTCGGTGGCCGTTCC | + |
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Preference number: 1 (lower is better) Translates to: KRFLSAALQAQASEP*GSAGQSGQQLGGRS Trigger: GGAACGGCCACCGAGCTGCTGACCGCTCTGGCCAGCCGAGCCCCAAGGCTCCGAGGCCTGCGCTTGGAGTGCCGCGGAGAGAAACCGCTT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR TCA 90 bp | ACCGCACCAGTGTGGGCCGCCAGGGATGCGGCTCACGCTTTAGCTTaGGCGTATAGCTGCGCAGGCGCGGACAGTGCGCTCGGAAGGCGT | + |
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Preference number: 1 (lower is better) Translates to: TAPVWAARDAAHALA*AYSCAGADSALGRR Trigger: ACGCCTTCCGAGCGCACTGTCCGCGCCTGCGCAGCTATACGCTCAAGCTAAAGCGTGAGCCGCATCCCTGGCGGCCCACACTGGTGCGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR CCA 90 bp | CTCGGAGCCTTGGGGCTCGGCTGGCCAGAGCGGTCAGCAGCTCGGTaGCCGTTCCGCGGCTGGGCTTCTTTGATGGCTCATATTCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: LGALGLGWPERSAAR*PFRGWASLMAHIPA Trigger: GGCTGGAATATGAGCCATCAAAGAAGCCCAGCCGCGGAACGGCCACCGAGCTGCTGACCGCTCTGGCCAGCCGAGCCCCAAGGCTCCGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR GCA 90 bp | CGCGCGCACCTCGAGGGCGCGCAAAGTTTCAGCGTAGTGGCGCGTTaGGAAGCGCACGGGTCCTACAGTGTCACCGGAGAGGTTGAGACG | + |
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Preference number: 1 (lower is better) Translates to: RAHLEGAQSFSVVAR*EAHGSYSVTGEVET Trigger: CGTCTCAACCTCTCCGGTGACACTGTAGGACCCGTGCGCTTCGCAACGCGCCACTACGCTGAAACTTTGCGCGCCCTCGAGGTGCGCGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR TCA 90 bp | GGCGCGTTGCGAAGCGCACGGGTCCTACAGTGTCACCGGAGAGGTTaGGACGCAGCACAGCCACTGGTACTGCTGGTTGCAGGATGCGCG | + |
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Preference number: 1 (lower is better) Translates to: GALRSARVLQCHRRG*DAAQPLVLLVAGCA Trigger: CGCGCATCCTGCAACCAGCAGTACCAGTGGCTGTGCTGCGTCTCAACCTCTCCGGTGACACTGTAGGACCCGTGCGCTTCGCAACGCGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR TCA 90 bp | GCGGCGCGCGACATACTAGCAAGGTGCAGTCCAAGGGCGCGCAAGTaGGGACAGGCCTCCAGTAGTTTGAGCACAGAAGTGGGCTGCACG | + |
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Preference number: 1 (lower is better) Translates to: AARDILARCSPRARK*GQASSSLSTEVGCT Trigger: CGTGCAGCCCACTTCTGTGCTCAAACTACTGGAGGCCTGTCCTCACTTGCGCGCCCTTGGACTGCACCTTGCTAGTATGTCGCGCGCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR CCA 90 bp | CTCGGCTGGCCAGAGCGGTCAGCAGCTCGGTGGCCGTTCCGCGGCTaGGCTTCTTTGATGGCTCATATTCCAGCCTTAGGTTGTGAATGT | + |
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Preference number: 1 (lower is better) Translates to: LGWPERSAARWPFRG*ASLMAHIPALGCEC Trigger: ACATTCACAACCTAAGGCTGGAATATGAGCCATCAAAGAAGCCCAGCCGCGGAACGGCCACCGAGCTGCTGACCGCTCTGGCCAGCCGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR TCA 90 bp | GGTGCAGTCCAAGGGCGCGCAAGTGAGGACAGGCCTCCAGTAGTTTaGGCACAGAAGTGGGCTGCACGCTGTTCACCAGTGCATGGTTGT | + |
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Preference number: 1 (lower is better) Translates to: GAVQGRASEDRPPVV*AQKWAARCSPVHGC Trigger: ACAACCATGCACTGGTGAACAGCGTGCAGCCCACTTCTGTGCTCAAACTACTGGAGGCCTGTCCTCACTTGCGCGCCCTTGGACTGCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR CCA 90 bp | AGTAGTTTGAGCACAGAAGTGGGCTGCACGCTGTTCACCAGTGCATaGTTGTCCAGGAAAAGACTGCGGAGCTCGGGACAGCCAGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: SSLSTEVGCTLFTSA*LSRKRLRSSGQPAA Trigger: TGCTGCTGGCTGTCCCGAGCTCCGCAGTCTTTTCCTGGACAACCATGCACTGGTGAACAGCGTGCAGCCCACTTCTGTGCTCAAACTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR TCA 90 bp | GTACAGAGGGGACGGAGGGCCCAGAATAGACAGAGACACAGAGGTTaGGAGGGCTCGCTGAATTTATGGTGCCTGAGATTGGTCTGGATG | + |
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Preference number: 1 (lower is better) Translates to: VQRGRRAQNRQRHRG*EGSLNLWCLRLVWM Trigger: CATCCAGACCAATCTCAGGCACCATAAATTCAGCGAGCCCTCTCAACCTCTGTGTCTCTGTCTATTCTGGGCCCTCCGTCCCCTCTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
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| 3UTR TCA 90 bp | TCACAACTGCATGTATGTCCGTGCACCACAGGCGTGCCTGGTGTCTaGGGAGGCCAGAAGGGGGTGTTGGAATCCCTAGAGCTGAAATTA | + |
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Preference number: 1 (lower is better) Translates to: SQLHVCPCTTGVPGV*GGQKGVLESLELKL Trigger: TAATTTCAGCTCTAGGGATTCCAACACCCCCTTCTGGCCTCCTCAGACACCAGGCACGCCTGTGGTGCACGGACATACATGCAGTTGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR GCA 90 bp | AGGACAGATATGGTGGCAACAAGTCTTCCAGCTCACAGTCACAACTaGATGTATGTCCGTGCACCACAGGCGTGCCTGGTGTCTGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: RTDMVATSLPAHSHN*MYVRAPQACLVSEE Trigger: CTCCTCAGACACCAGGCACGCCTGTGGTGCACGGACATACATGCAGTTGTGACTGTGAGCTGGAAGACTTGTTGCCACCATATCTGTCCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR-3UTR TCA 90 bp | CGCAGGCGCGGACAGTGCGCTCGGAAGGCGTCCAGTACCGAGGGTCTCACCACGGGCGTGCCTGGTGTCTaGGGAGGCCAGAAGGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: RRRGQCARKASSTEGLTTGVPGV*GGQKGV Trigger: CACCCCCTTCTGGCCTCCTCAGACACCAGGCACGCC...CGTGGTGAGACCCTCGGTACTGGACGCCTTCCGAGCGCACTGTCCGCGCCTGCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR-3UTR GCA 90 bp | CGCCGCCAGCTCCTCCAGCGCGGTGTGCAACTCCGGGGATGCGGACGCGCGCACCCTCAGTGCCAGAAGTaGAAAAGGGGAGCGATGCGG | + |
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Preference number: 2 (lower is better) Translates to: RRQLLQRGVQLRGCGRAHPQCQK*KRGAMR Trigger: CCGCATCGCTCCCCTTTTGCACTTCTGGCACTGAGG...GTGCGCGCGTCCGCATCCCCGGAGTTGCACACCGCGCTGGAGGAGCTGGCGGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR-3UTR CCA 90 bp | CGCCGCCAGCTCCTCCAGCGCGGTGTGCAACTCCGGGGATGCGGACGCGCGCACGGAGGACAGATATGGTaGCAACAAGTCTTCCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: RRQLLQRGVQLRGCGRAHGGQIW*QQVFQL Trigger: GAGCTGGAAGACTTGTTGCCACCATATCTGTCCTCC...GTGCGCGCGTCCGCATCCCCGGAGTTGCACACCGCGCTGGAGGAGCTGGCGGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR CAA 90 bp | GTCGTCCAGCGTGTAGGGCAAGTGGCGCAGGTCGAGGTGGCGAAGTaGGTGAGCAGCTCCGCAGACTGCGTGCACAGCTCCCAGGATGTC | + |
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Preference number: 2 (lower is better) Translates to: VVQRVGQVAQVEVAK*VSSSADCVHSSQDV Trigger: GACATCCTGGGAGCTGTGCACGCAGTCTGCGGAGCTGCTCACCAACTTCGCCACCTCGACCTGCGCCACTTGCCCTACACGCTGGACGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR CAA 90 bp | TGGCGCGTTGCGAAGCGCACGGGTCCTACAGTGTCACCGGAGAGGTaGAGACGCAGCACAGCCACTGGTACTGCTGGTTGCAGGATGCGC | + |
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Preference number: 2 (lower is better) Translates to: WRVAKRTGPTVSPER*RRSTATGTAGCRMR Trigger: GCGCATCCTGCAACCAGCAGTACCAGTGGCTGTGCTGCGTCTCAACCTCTCCGGTGACACTGTAGGACCCGTGCGCTTCGCAACGCGCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTCGGAGCCTTGGGGCTCGGCTGGCCAGAGCGGTCAGCAGCTCGGTGGCCGTGCTAGTGCTCTTAACTaGAGAGTCATTTCTATGTGC | + |
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Preference number: 2 (lower is better) Translates to: ASEPWGSAGQSGQQLGGRASALN*RVISMC Trigger: GCACATAGAAATGACTCTTCAGTTAAGAGCACTAGC...ACGGCCACCGAGCTGCTGACCGCTCTGGCCAGCCGAGCCCCAAGGCTCCGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR-3UTR TCA 90 bp | CCACGCAGAAGCAGTGTATTTCTCTCAAGCCCGCGCAGCGCGCCGCCAGCTCCTAGGCCTCCAGTAGTTTaGGCACAGAAGTGGGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: PRRSSVFLSSPRSAPPAPRPPVV*AQKWAA Trigger: TGCAGCCCACTTCTGTGCTCAAACTACTGGAGGCCT...AGGAGCTGGCGGCGCGCTGCGCGGGCTTGAGAGAAATACACTGCTTCTGCGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR-3UTR CCA 90 bp | CGTCCAGTACCGAGGGTCTCACCACGCAGAAGCAGTGTATTTCTCTCAAGCCCGACCTCCAGCCCAGGATaGCGGCAACTCAGCGTCGCC | + |
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Preference number: 2 (lower is better) Translates to: RPVPRVSPRRSSVFLSSPTSSPG*RQLSVA Trigger: GGCGACGCTGAGTTGCCGCCATCCTGGGCTGGAGGT...CGGGCTTGAGAGAAATACACTGCTTCTGCGTGGTGAGACCCTCGGTACTGGACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR CAA 90 bp | CCAGAGCGGTCAGCAGCTCGGTGGCCGTTCCGCGGCTGGGCTTCTTaGATGGCTCATATTCCAGCCTTAGGTTGTGAATGTGGTCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: PERSAARWPFRGWAS*MAHIPALGCECGPG Trigger: GCCTGGACCACATTCACAACCTAAGGCTGGAATATGAGCCATCAAAGAAGCCCAGCCGCGGAACGGCCACCGAGCTGCTGACCGCTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR CAA 90 bp | AGTTTGAGCACAGAAGTGGGCTGCACGCTGTTCACCAGTGCATGGTaGTCCAGGAAAAGACTGCGGAGCTCGGGACAGCCAGCAGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: SLSTEVGCTLFTSAW*SRKRLRSSGQPAAA Trigger: GGCTGCTGCTGGCTGTCCCGAGCTCCGCAGTCTTTTCCTGGACAACCATGCACTGGTGAACAGCGTGCAGCCCACTTCTGTGCTCAAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAAGCACGAGCATCTTCGGGGCACGCGCACCTCAGTGCCAGAAGTGCAAAAGCTTCGAGCTGCTGTGTaGGAGGCAGGAATCGAACTC | + |
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Preference number: 2 (lower is better) Translates to: GKHEHLRGTRTSVPEVQKLRAAV*EAGIEL Trigger: GAGTTCGATTCCTGCCTCGCACACAGCAGCTCGAAG...CTTTTGCACTTCTGGCACTGAGGTGCGCGTGCCCCGAAGATGCTCGTGCTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR-3UTR CCA 90 bp | TCATCAGGCAGAGGGGAAGCACGAGCATCTTCGGGGCACGCGCACCTCAGTGCCGCAGGAGGACAGATATaGTGGCAACAAGTCTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: SSGRGEARASSGHAHLSAAGGQI*WQQVFQ Trigger: CTGGAAGACTTGTTGCCACCATATCTGTCCTCCTGC...GGCACTGAGGTGCGCGTGCCCCGAAGATGCTCGTGCTTCCCCTCTGCCTGATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR-3UTR CCA 90 bp | CTCGGAAGGCGTCCAGTACCGAGGGTCTCACCACGCAGAAGCAGTGTATTTCTCTGGCCGTTCCGCGGCTaGGCTTCTTTGATGGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: LGRRPVPRVSPRRSSVFLWPFRG*ASLMAH Trigger: ATGAGCCATCAAAGAAGCCCAGCCGCGGAACGGCCA...GAGAAATACACTGCTTCTGCGTGGTGAGACCCTCGGTACTGGACGCCTTCCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR-3UTR GCA 90 bp | CTCGGAAGGCGTCCAGTACCGAGGGTCTCACCACGCAGAAGCAGTGTATTTCTCGCCATAGCTTCGAGCTaGTGTGTGCGAGGCAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: LGRRPVPRVSPRRSSVFLAIASS*CVRGRN Trigger: ATTCCTGCCTCGCACACAGCAGCTCGAAGCTATGGC...GAGAAATACACTGCTTCTGCGTGGTGAGACCCTCGGTACTGGACGCCTTCCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR-3UTR GCA 90 bp | CGTCCAGTACCGAGGGTCTCACCACGCAGAAGCAGTGTATTTCTCTCAAGCCCGGACATACTAGCAAGGTaGAGTCCAAGGGCGCGCAAG | + |
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Preference number: 2 (lower is better) Translates to: RPVPRVSPRRSSVFLSSPDILAR*SPRARK Trigger: CTTGCGCGCCCTTGGACTGCACCTTGCTAGTATGTC...CGGGCTTGAGAGAAATACACTGCTTCTGCGTGGTGAGACCCTCGGTACTGGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGGCGTCCAGTACCGAGGGTCTCACCACGCAGAAGCAGTGTATTTCTCTCAAGCGGCTGGGCTTCTTTaGTGGCTCATATTCCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: EGVQYRGSHHAEAVYFSQAAGLL*WLIFQP Trigger: AGGCTGGAATATGAGCCATCAAAGAAGCCCAGCCGC...TTGAGAGAAATACACTGCTTCTGCGTGGTGAGACCCTCGGTACTGGACGCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR-3UTR TCA 90 bp | GATTTATTTACTTTACACTCACCCTTGACTCTTGGCTCCTACTTGTGCCTGCCCCCCCAGCTCTGGACCTaGGCTAGAGCTAGTGCGAGT | + |
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Preference number: 2 (lower is better) Translates to: DLFTLHSPLTLGSYLCLPPQLWT*ARASAS Trigger: ACTCGCACTAGCTCTAGCTCAGGTCCAGAGCTGGGG...GGGCAGGCACAAGTAGGAGCCAAGAGTCAAGGGTGAGTGTAAAGTAAATAAATC 52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
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| 3UTR-3UTR GCA 90 bp | CTCGGAAGGCGTCCAGTACCGAGGGTCTCACCACGCAGAAGCAGTGTATTTCTCTCGCTGAATTTATGGTaGCTGAGATTGGTCTGGATG | + |
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Preference number: 2 (lower is better) Translates to: LGRRPVPRVSPRRSSVFLSLNLW*LRLVWM Trigger: CATCCAGACCAATCTCAGGCACCATAAATTCAGCGA...GAGAAATACACTGCTTCTGCGTGGTGAGACCCTCGGTACTGGACGCCTTCCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR-3UTR TCA 90 bp | GATTTATTTACTTTACACTCACCCTTGACTCTTGGCTCCTACTTGTGCCTGCCCCAGAGACACAGAGGTTaGGAGGGCTCGCTGAATTTA | + |
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Preference number: 2 (lower is better) Translates to: DLFTLHSPLTLGSYLCLPQRHRG*EGSLNL Trigger: TAAATTCAGCGAGCCCTCTCAACCTCTGTGTCTCTG...GGGCAGGCACAAGTAGGAGCCAAGAGTCAAGGGTGAGTGTAAAGTAAATAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
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| 3UTR-3UTR GCA 90 bp | AAGGATTTATTTACTTTACACTCACCCTTGACTCTTGGCTCCTACTTGTGCCTGTCGCTGAATTTATGGTaGCTGAGATTGGTCTGGATG | + |
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Preference number: 2 (lower is better) Translates to: KDLFTLHSPLTLGSYLCLSLNLW*LRLVWM Trigger: CATCCAGACCAATCTCAGGCACCATAAATTCAGCGA...CAGGCACAAGTAGGAGCCAAGAGTCAAGGGTGAGTGTAAAGTAAATAAATCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
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| 3UTR CCA 72 bp | ACTCCAAGCGCAGGCCTCGGAGCCTTGGGGCTCGGCTaGCCAGAGCGGTCAGCAGCTCGGTGGCCGTTCCGC | + |
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Preference number: 3 (lower is better) Translates to: TPSAGLGALGLG*PERSAARWPFR Trigger: GCGGAACGGCCACCGAGCTGCTGACCGCTCTGGCCAGCCGAGCCCCAAGGCTCCGAGGCCTGCGCTTGGAGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR CCA 72 bp | CTCTCCGCGGCACTCCAAGCGCAGGCCTCGGAGCCTTaGGGCTCGGCTGGCCAGAGCGGTCAGCAGCTCGGT | + |
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Preference number: 3 (lower is better) Translates to: LSAALQAQASEP*GSAGQSGQQLG Trigger: ACCGAGCTGCTGACCGCTCTGGCCAGCCGAGCCCCAAGGCTCCGAGGCCTGCGCTTGGAGTGCCGCGGAGAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR GCA 72 bp | CGCCAGCTCCTCCAGCGCGGTGTGCAACTCCGGGGATaGGGACGCGCGCACCTCGAGGGCGCGCAAAGTTTC | + |
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Preference number: 3 (lower is better) Translates to: RQLLQRGVQLRG*GRAHLEGAQSF Trigger: GAAACTTTGCGCGCCCTCGAGGTGCGCGCGTCCGCATCCCCGGAGTTGCACACCGCGCTGGAGGAGCTGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGAGCGGTCAGCAGCTCGGTGGCCGTTCCGCGGCTGGGCTTCTTTGATGGCTAGGCCTTCCCGAGGCTaGGGGTTCGCGCGGCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: PERSAARWPFRGWASLMARPSRG*GFARPW Trigger: CCAGGGCCGCGCGAACCCCAAGCCTCGGGAAGGCCT...AGCCATCAAAGAAGCCCAGCCGCGGAACGGCCACCGAGCTGCTGACCGCTCTGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR TCA 72 bp | GTGTGGGCCGCCAGGGATGCGGCTCACGCTTTAGCTTaGGCGTATAGCTGCGCAGGCGCGGACAGTGCGCTC | + |
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Preference number: 3 (lower is better) Translates to: VWAARDAAHALA*AYSCAGADSAL Trigger: GAGCGCACTGTCCGCGCCTGCGCAGCTATACGCTCAAGCTAAAGCGTGAGCCGCATCCCTGGCGGCCCACAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR CCA 72 bp | TTGGGGCTCGGCTGGCCAGAGCGGTCAGCAGCTCGGTaGCCGTTCCGCGGCTGGGCTTCTTTGATGGCTCAT | + |
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Preference number: 3 (lower is better) Translates to: LGLGWPERSAAR*PFRGWASLMAH Trigger: ATGAGCCATCAAAGAAGCCCAGCCGCGGAACGGCCACCGAGCTGCTGACCGCTCTGGCCAGCCGAGCCCCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR-3UTR CAA 90 bp | GTTCACCAGTGCATGGTTGTCCAGGAAAAGACTGCGGAGCTCGGGACAGCCAGCGCAGGCCTCGGAGCCTaGGGGCTCGGCTGGCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: VHQCMVVQEKTAELGTASAGLGA*GLGWPE Trigger: CTCTGGCCAGCCGAGCCCCAAGGCTCCGAGGCCTGC...GCTGGCTGTCCCGAGCTCCGCAGTCTTTTCCTGGACAACCATGCACTGGTGAAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR-3UTR CAA 90 bp | AGTGCGAGTGTACAGAGGGGACGGAGGGCCCAGAATAGACAGAGACACAGAGGTAGGCCTTCCCGAGGCTaGGGGTTCGCGCGGCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: SASVQRGRRAQNRQRHRGRPSRG*GFARPW Trigger: CCAGGGCCGCGCGAACCCCAAGCCTCGGGAAGGCCT...ACCTCTGTGTCTCTGTCTATTCTGGGCCCTCCGTCCCCTCTGTACACTCGCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
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| 3UTR CCA 72 bp | GCTCCGCAGACTGCGTGCACAGCTCCCAGGATGTCCTaGCCCGCATCAAAAAGCGGTTTCTCTCCGCGGCAC | + |
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Preference number: 3 (lower is better) Translates to: APQTACTAPRMS*PASKSGFSPRH Trigger: GTGCCGCGGAGAGAAACCGCTTTTTGATGCGGGCCAGGACATCCTGGGAGCTGTGCACGCAGTCTGCGGAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR GCA 72 bp | ACCGGAGAGGTTGAGACGCAGCACAGCCACTGGTACTaGTGGTTGCAGGATGCGCGTCACGGCCTCATCTGG | + |
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Preference number: 3 (lower is better) Translates to: TGEVETQHSHWY*WLQDARHGLIW Trigger: CCAGATGAGGCCGTGACGCGCATCCTGCAACCAGCAGTACCAGTGGCTGTGCTGCGTCTCAACCTCTCCGGT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR CCA 72 bp | TACTGCTGGTTGCAGGATGCGCGTCACGGCCTCATCTaGAAGCACAGGCTCCAGCTCCAGCTCCACCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: YCWLQDARHGLI*KHRLQLQLHLQ Trigger: CTGGAGGTGGAGCTGGAGCTGGAGCCTGTGCTTCCAGATGAGGCCGTGACGCGCATCCTGCAACCAGCAGTA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR CCA 72 bp | CCAGAGCGGTCAGCAGCTCGGTGGCCGTTCCGCGGCTaGGCTTCTTTGATGGCTCATATTCCAGCCTTAGGT | + |
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Preference number: 3 (lower is better) Translates to: PERSAARWPFRG*ASLMAHIPALG Trigger: ACCTAAGGCTGGAATATGAGCCATCAAAGAAGCCCAGCCGCGGAACGGCCACCGAGCTGCTGACCGCTCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR CCA 72 bp | GGAGAGGTTGAGACGCAGCACAGCCACTGGTACTGCTaGTTGCAGGATGCGCGTCACGGCCTCATCTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: GEVETQHSHWYC*LQDARHGLIWK Trigger: CTTCCAGATGAGGCCGTGACGCGCATCCTGCAACCAGCAGTACCAGTGGCTGTGCTGCGTCTCAACCTCTCC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR TCA 72 bp | CAAGGGCGCGCAAGTGAGGACAGGCCTCCAGTAGTTTaGGCACAGAAGTGGGCTGCACGCTGTTCACCAGTG | + |
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Preference number: 3 (lower is better) Translates to: QGRASEDRPPVV*AQKWAARCSPV Trigger: CACTGGTGAACAGCGTGCAGCCCACTTCTGTGCTCAAACTACTGGAGGCCTGTCCTCACTTGCGCGCCCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
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| 3UTR GCA 72 bp | AGGTTGAGACGCAGCACAGCCACTGGTACTGCTGGTTaGAGGATGCGCGTCACGGCCTCATCTGGAAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: RLRRSTATGTAG*RMRVTASSGST Trigger: TGTGCTTCCAGATGAGGCCGTGACGCGCATCCTGCAACCAGCAGTACCAGTGGCTGTGCTGCGTCTCAACCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCGGAAGGCGTCCAGTACCGAGGGTCTCACCACGCAGAAGCAGTGTATTTCTCCGCGGCTGGGCTTCTTaGATGGCTCATATTCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LGRRPVPRVSPRRSSVFLRGWAS*MAHIPA Trigger: GGCTGGAATATGAGCCATCAAAGAAGCCCAGCCGCG...GAGAAATACACTGCTTCTGCGTGGTGAGACCCTCGGTACTGGACGCCTTCCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
||
| 3UTR CCA 72 bp | ACAACTGCATGTATGTCCGTGCACCACAGGCGTGCCTaGTGTCTGAGGAGGCCAGAAGGGGGTGTTGGAATC | + |
|
Preference number: 3 (lower is better) Translates to: TTACMSVHHRRA*CLRRPEGGVGI Trigger: GATTCCAACACCCCCTTCTGGCCTCCTCAGACACCAGGCACGCCTGTGGTGCACGGACATACATGCAGTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
||
| 3UTR CCA 72 bp | AGCACAGAAGTGGGCTGCACGCTGTTCACCAGTGCATaGTTGTCCAGGAAAAGACTGCGGAGCTCGGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: STEVGCTLFTSA*LSRKRLRSSGQ Trigger: CTGTCCCGAGCTCCGCAGTCTTTTCCTGGACAACCATGCACTGGTGAACAGCGTGCAGCCCACTTCTGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
||
| 3UTR GCA 72 bp | ATGGTGGCAACAAGTCTTCCAGCTCACAGTCACAACTaGATGTATGTCCGTGCACCACAGGCGTGCCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: MVATSLPAHSHN*MYVRAPQACLV Trigger: CACCAGGCACGCCTGTGGTGCACGGACATACATGCAGTTGTGACTGTGAGCTGGAAGACTTGTTGCCACCAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
||
| 3UTR GCA 72 bp | GGACAGGCCTCCAGTAGTTTGAGCACAGAAGTGGGCTaGACGCTGTTCACCAGTGCATGGTTGTCCAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GQASSSLSTEVG*TLFTSAWLSRK Trigger: TTTCCTGGACAACCATGCACTGGTGAACAGCGTGCAGCCCACTTCTGTGCTCAAACTACTGGAGGCCTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
||
| 3UTR TCA 72 bp | GGACGGAGGGCCCAGAATAGACAGAGACACAGAGGTTaGGAGGGCTCGCTGAATTTATGGTGCCTGAGATTG | + |
|
Preference number: 3 (lower is better) Translates to: GRRAQNRQRHRG*EGSLNLWCLRL Trigger: CAATCTCAGGCACCATAAATTCAGCGAGCCCTCTCAACCTCTGTGTCTCTGTCTATTCTGGGCCCTCCGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| 3UTR TCA 72 bp | GGCTTCTTTGATGGCTCATATTCCAGCCTTAGGTTGTaGATGTGGTCCAGGCAGGAGGACAGATATGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: GFFDGSYSSLRL*MWSRQEDRYGG Trigger: GCCACCATATCTGTCCTCCTGCCTGGACCACATTCACAACCTAAGGCTGGAATATGAGCCATCAAAGAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
||
| 3UTR GCA 72 bp | ATCCCTAGAGCTGAAATTACAGCCATAGCTTCGAGCTaGTGTGTGCGAGGCAGGAATCGAACTCAGGTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: IPRAEITAIASS*CVRGRNRTQVF Trigger: GAAGACCTGAGTTCGATTCCTGCCTCGCACACAGCAGCTCGAAGCTATGGCTGTAATTTCAGCTCTAGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
||
| 3UTR CCA 72 bp | GTTGTGAATGTGGTCCAGGCAGGAGGACAGATATGGTaGCAACAAGTCTTCCAGCTCACAGTCACAACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: VVNVVQAGGQIW*QQVFQLTVTTA Trigger: TGCAGTTGTGACTGTGAGCTGGAAGACTTGTTGCCACCATATCTGTCCTCCTGCCTGGACCACATTCACAAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
||
| CDS-3UTR GCA 90 bp | AAGTTGGTGAGCAGCTCCGCAGACTGCGTGCACAGCTCCCAGGATGTCCTGGCCCCGCCGCCCAGGCCCTaGAGACTCTGGTGGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: KLVSSSADCVHSSQDVLAPPPRP*RLWWLQ Trigger: CTGTAGCCACCAGAGTCTGCAGGGCCTGGGCGGCGG...GGCCAGGACATCCTGGGAGCTGTGCACGCAGTCTGCGGAGCTGCTCACCAACTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
||
| CDS-3UTR GCA 90 bp | AGCTCTGGACCTGAGCTAGAGCTAGTGCGAGTGTACAGAGGGGACGGAGGGCCCGTGCAACTCCGGGGATaGGGACGCGCGCACCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSGPELELVRVYRGDGGPVQLRG*GRAHLE Trigger: CTCGAGGTGCGCGCGTCCGCATCCCCGGAGTTGCAC...GGGCCCTCCGTCCCCTCTGTACACTCGCACTAGCTCTAGCTCAGGTCCAGAGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| 3UTR CAA 72 bp | CGTGTAGGGCAAGTGGCGCAGGTCGAGGTGGCGAAGTaGGTGAGCAGCTCCGCAGACTGCGTGCACAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVGQVAQVEVAK*VSSSADCVHSS Trigger: GGAGCTGTGCACGCAGTCTGCGGAGCTGCTCACCAACTTCGCCACCTCGACCTGCGCCACTTGCCCTACACG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
||
| 3UTR CAA 72 bp | CCTCGAGGGCGCGCAAAGTTTCAGCGTAGTGGCGCGTaGCGAAGCGCACGGGTCCTACAGTGTCACCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PRGRAKFQRSGA*RSARVLQCHRR Trigger: TCTCCGGTGACACTGTAGGACCCGTGCGCTTCGCAACGCGCCACTACGCTGAAACTTTGCGCGCCCTCGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
||
| CDS-3UTR GCA 90 bp | AGTGCGAGTGTACAGAGGGGACGGAGGGCCCAGAATAGACAGAGACACAGAGGTCCGCCGCCCAGGCCCTaGAGACTCTGGTGGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: SASVQRGRRAQNRQRHRGPPPRP*RLWWLQ Trigger: CTGTAGCCACCAGAGTCTGCAGGGCCTGGGCGGCGG...ACCTCTGTGTCTCTGTCTATTCTGGGCCCTCCGTCCCCTCTGTACACTCGCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| CDS-3UTR GCA 90 bp | AGCTCTGGACCTGAGCTAGAGCTAGTGCGAGTGTACAGAGGGGACGGAGGGCCCTGTCCAGGAAAAGACTaGGGAGCTCGGGACAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSGPELELVRVYRGDGGPCPGKD*GARDSQ Trigger: CTGGCTGTCCCGAGCTCCGCAGTCTTTTCCTGGACA...GGGCCCTCCGTCCCCTCTGTACACTCGCACTAGCTCTAGCTCAGGTCCAGAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| CDS-3UTR CCA 90 bp | AGTGCGAGTGTACAGAGGGGACGGAGGGCCCAGAATAGACAGAGACACAGAGGTACCTCCAGCCCAGGATaGCGGCAACTCAGCGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SASVQRGRRAQNRQRHRGTSSPG*RQLSVA Trigger: GGCGACGCTGAGTTGCCGCCATCCTGGGCTGGAGGT...ACCTCTGTGTCTCTGTCTATTCTGGGCCCTCCGTCCCCTCTGTACACTCGCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| CDS-3UTR TCA 90 bp | AGCTCTGGACCTGAGCTAGAGCTAGTGCGAGTGTACAGAGGGGACGGAGGGCCCAGGCCTCCAGTAGTTTaGGCACAGAAGTGGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSGPELELVRVYRGDGGPRPPVV*AQKWAA Trigger: TGCAGCCCACTTCTGTGCTCAAACTACTGGAGGCCT...GGGCCCTCCGTCCCCTCTGTACACTCGCACTAGCTCTAGCTCAGGTCCAGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| CDS-3UTR CCA 90 bp | AGTGCGAGTGTACAGAGGGGACGGAGGGCCCAGAATAGACAGAGACACAGAGGTAGGCCCTGCAGACTCTaGTGGCTACAGCAAGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SASVQRGRRAQNRQRHRGRPCRL*WLQQGP Trigger: GGGACCTTGCTGTAGCCACCAGAGTCTGCAGGGCCT...ACCTCTGTGTCTCTGTCTATTCTGGGCCCTCCGTCCCCTCTGTACACTCGCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| CDS-3UTR CCA 90 bp | CGTCCAGTACCGAGGGTCTCACCACGCAGAAGCAGTGTATTTCTCTCAAGCCCGAGGCCCTGCAGACTCTaGTGGCTACAGCAAGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RPVPRVSPRRSSVFLSSPRPCRL*WLQQGP Trigger: GGGACCTTGCTGTAGCCACCAGAGTCTGCAGGGCCT...CGGGCTTGAGAGAAATACACTGCTTCTGCGTGGTGAGACCCTCGGTACTGGACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTCGCTGAATTTATGGTGCCTGAGATTGGTCTGGATGCTTTCATAGACCCCTCCTCCAGCGCGGTGTaGAACTCCGGGGATGCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GLAEFMVPEIGLDAFIDPSSSAV*NSGDAD Trigger: GTCCGCATCCCCGGAGTTGCACACCGCGCTGGAGGA...GGGGTCTATGAAAGCATCCAGACCAATCTCAGGCACCATAAATTCAGCGAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| CDS-3UTR CCA 90 bp | CTAGTGCGAGTGTACAGAGGGGACGGAGGGCCCAGAATAGACAGAGACACAGAGAGCCACTGGTACTGCTaGTTGCAGGATGCGCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LVRVYRGDGGPRIDRDTESHWYC*LQDARH Trigger: GTGACGCGCATCCTGCAACCAGCAGTACCAGTGGCT...CTCTGTGTCTCTGTCTATTCTGGGCCCTCCGTCCCCTCTGTACACTCGCACTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| 3UTR CAA 72 bp | ACAGAAGTGGGCTGCACGCTGTTCACCAGTGCATGGTaGTCCAGGAAAAGACTGCGGAGCTCGGGACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TEVGCTLFTSAW*SRKRLRSSGQP Trigger: TGGCTGTCCCGAGCTCCGCAGTCTTTTCCTGGACAACCATGCACTGGTGAACAGCGTGCAGCCCACTTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
||
| CDS-3UTR TCA 90 bp | CTAGTGCGAGTGTACAGAGGGGACGGAGGGCCCAGAATAGACAGAGACACAGAGGCGGCTGGGCTTCTTTaGTGGCTCATATTCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVRVYRGDGGPRIDRDTEAAGLL*WLIFQP Trigger: AGGCTGGAATATGAGCCATCAAAGAAGCCCAGCCGC...CTCTGTGTCTCTGTCTATTCTGGGCCCTCCGTCCCCTCTGTACACTCGCACTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| CDS-3UTR GCA 90 bp | GTGCGAGTGTACAGAGGGGACGGAGGGCCCAGAATAGACAGAGACACAGAGGTTGACATACTAGCAAGGTaGAGTCCAAGGGCGCGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VRVYRGDGGPRIDRDTEVDILAR*SPRARK Trigger: CTTGCGCGCCCTTGGACTGCACCTTGCTAGTATGTC...AACCTCTGTGTCTCTGTCTATTCTGGGCCCTCCGTCCCCTCTGTACACTCGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| CDS-3UTR TCA 90 bp | CGCATCAAAAAGCGGTTTCTCTCCGCGGCACTCCAAGCGCAGGCCTCGGAGCCTACTTTGCCTCTTGCCTaGTGCTTTTATCAGACCACA | + |
|
Preference number: 4 (lower is better) Translates to: RIKKRFLSAALQAQASEPTLPLA*CFYQTT Trigger: TGTGGTCTGATAAAAGCATCAGGCAAGAGGCAAAGT...AGGCTCCGAGGCCTGCGCTTGGAGTGCCGCGGAGAGAAACCGCTTTTTGATGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTCGCTGAATTTATGGTGCCTGAGATTGGTCTGGATGCTTTCATAGACCCCCTGCTGGTTGCAGGATaGGCGTCACGGCCTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLAEFMVPEIGLDAFIDPLLVAG*ASRPHL Trigger: CAGATGAGGCCGTGACGCGCATCCTGCAACCAGCAG...GGGGTCTATGAAAGCATCCAGACCAATCTCAGGCACCATAAATTCAGCGAGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| CDS-3UTR GCA 90 bp | GATTTATTTACTTTACACTCACCCTTGACTCTTGGCTCCTACTTGTGCCTGCCCCGCAGGCGCGGACAGTaGGCTCGGAAGGCGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DLFTLHSPLTLGSYLCLPRRRGQ*ARKASS Trigger: ACTGGACGCCTTCCGAGCGCACTGTCCGCGCCTGCG...GGGCAGGCACAAGTAGGAGCCAAGAGTCAAGGGTGAGTGTAAAGTAAATAAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| 3UTR CAA 72 bp | TCAGCAGCTCGGTGGCCGTTCCGCGGCTGGGCTTCTTaGATGGCTCATATTCCAGCCTTAGGTTGTGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: SAARWPFRGWAS*MAHIPALGCEC Trigger: ACATTCACAACCTAAGGCTGGAATATGAGCCATCAAAGAAGCCCAGCCGCGGAACGGCCACCGAGCTGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
||
| CDS-3UTR CCA 90 bp | CTAGTGCGAGTGTACAGAGGGGACGGAGGGCCCAGAATAGACAGAGACACAGAGGGAGGACAGATATGGTaGCAACAAGTCTTCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVRVYRGDGGPRIDRDTEGGQIW*QQVFQL Trigger: GAGCTGGAAGACTTGTTGCCACCATATCTGTCCTCC...CTCTGTGTCTCTGTCTATTCTGGGCCCTCCGTCCCCTCTGTACACTCGCACTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| CDS-3UTR TCA 90 bp | AGTGCGAGTGTACAGAGGGGACGGAGGGCCCAGAATAGACAGAGACACAGAGGTGCTCACAGTCACAACTaGTGCTTTTATCAGACCACA | + |
|
Preference number: 4 (lower is better) Translates to: SASVQRGRRAQNRQRHRGAHSHN*CFYQTT Trigger: TGTGGTCTGATAAAAGCATCAGTTGTGACTGTGAGC...ACCTCTGTGTCTCTGTCTATTCTGGGCCCTCCGTCCCCTCTGTACACTCGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| CDS-3UTR GCA 90 bp | GATTTATTTACTTTACACTCACCCTTGACTCTTGGCTCCTACTTGTGCCTGCCCACTGGTACTGCTGGTTaGAGGATGCGCGTCACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DLFTLHSPLTLGSYLCLPTGTAG*RMRVTA Trigger: GGCCGTGACGCGCATCCTGCAACCAGCAGTACCAGT...GGGCAGGCACAAGTAGGAGCCAAGAGTCAAGGGTGAGTGTAAAGTAAATAAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| CDS-3UTR GCA 90 bp | GATTTATTTACTTTACACTCACCCTTGACTCTTGGCTCCTACTTGTGCCTGCCCCCTCAGTGCCAGAAGTaGAAAAGGGGAGCGATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DLFTLHSPLTLGSYLCLPPQCQK*KRGAMR Trigger: CCGCATCGCTCCCCTTTTGCACTTCTGGCACTGAGG...GGGCAGGCACAAGTAGGAGCCAAGAGTCAAGGGTGAGTGTAAAGTAAATAAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| CDS-3UTR CCA 90 bp | GATTTATTTACTTTACACTCACCCTTGACTCTTGGCTCCTACTTGTGCCTGCCCTGGCCGTTCCGCGGCTaGGCTTCTTTGATGGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DLFTLHSPLTLGSYLCLPWPFRG*ASLMAH Trigger: ATGAGCCATCAAAGAAGCCCAGCCGCGGAACGGCCA...GGGCAGGCACAAGTAGGAGCCAAGAGTCAAGGGTGAGTGTAAAGTAAATAAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| CDS-3UTR GCA 90 bp | AAGGATTTATTTACTTTACACTCACCCTTGACTCTTGGCTCCTACTTGTGCCTGGCACGCGCACCTCAGTaGCAGAAGTGCAAAAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KDLFTLHSPLTLGSYLCLARAPQ*QKCKRG Trigger: TCCCCTTTTGCACTTCTGGCACTGAGGTGCGCGTGC...CAGGCACAAGTAGGAGCCAAGAGTCAAGGGTGAGTGTAAAGTAAATAAATCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| CDS-3UTR CCA 90 bp | GATTTATTTACTTTACACTCACCCTTGACTCTTGGCTCCTACTTGTGCCTGCCCGCAGGAGGACAGATATaGTGGCAACAAGTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DLFTLHSPLTLGSYLCLPAGGQI*WQQVFQ Trigger: CTGGAAGACTTGTTGCCACCATATCTGTCCTCCTGC...GGGCAGGCACAAGTAGGAGCCAAGAGTCAAGGGTGAGTGTAAAGTAAATAAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| CDS-3UTR CCA 90 bp | GATTTATTTACTTTACACTCACCCTTGACTCTTGGCTCCTACTTGTGCCTGCCCCTGTTCACCAGTGCATaGTTGTCCAGGAAAAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: DLFTLHSPLTLGSYLCLPLFTSA*LSRKRL Trigger: CAGTCTTTTCCTGGACAACCATGCACTGGTGAACAG...GGGCAGGCACAAGTAGGAGCCAAGAGTCAAGGGTGAGTGTAAAGTAAATAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| 3UTR CAA 72 bp | GGAATATTAAAGGATTTATTTACTTTACACTCACCCTaGACTCTTGGCTCCTACTTGTGCCTGCCCTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GILKDLFTLHSP*TLGSYLCLPSP Trigger: GGGGGAGGGCAGGCACAAGTAGGAGCCAAGAGTCAAGGGTGAGTGTAAAGTAAATAAATCCTTTAATATTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| CDS-3UTR CAA 90 bp | CTAGTGCGAGTGTACAGAGGGGACGGAGGGCCCAGAATAGACAGAGACACAGAGGCAGGCCTCGGAGCCTaGGGGCTCGGCTGGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LVRVYRGDGGPRIDRDTEAGLGA*GLGWPE Trigger: CTCTGGCCAGCCGAGCCCCAAGGCTCCGAGGCCTGC...CTCTGTGTCTCTGTCTATTCTGGGCCCTCCGTCCCCTCTGTACACTCGCACTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| CDS-3UTR CAA 90 bp | CTAGTGCGAGTGTACAGAGGGGACGGAGGGCCCAGAATAGACAGAGACACAGAGCAGCGTAGTGGCGCGTaGCGAAGCGCACGGGTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: LVRVYRGDGGPRIDRDTEQRSGA*RSARVL Trigger: TAGGACCCGTGCGCTTCGCAACGCGCCACTACGCTG...CTCTGTGTCTCTGTCTATTCTGGGCCCTCCGTCCCCTCTGTACACTCGCACTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| CDS TCA 90 bp | AGGACAGATATGGTGGCAACAAGTCTTCCAGCTCACAGTCACAACTaGTGCTTTTATCAGACCACACGGTGCTGTTGGCGGCAGCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RTDMVATSLPAHSHN*CFYQTTRCCWRQPP Trigger: CGGCGGCTGCCGCCAACAGCACCGTGTGGTCTGATAAAAGCATCAGTTGTGACTGTGAGCTGGAAGACTTGTTGCCACCATATCTGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| CDS-3UTR CAA 90 bp | TTAAAGGATTTATTTACTTTACACTCACCCTTGACTCTTGGCTCCTACTTGTGCCGCGGCTGGGCTTCTTaGATGGCTCATATTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LKDLFTLHSPLTLGSYLCRGWAS*MAHIPA Trigger: GGCTGGAATATGAGCCATCAAAGAAGCCCAGCCGCG...GCACAAGTAGGAGCCAAGAGTCAAGGGTGAGTGTAAAGTAAATAAATCCTTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| CDS CAA 72 bp | TCTTGCCTGATGCTTTTATCAGACCACACGGTGCTGTaGGCGGCAGCCGCCGCCCAGGCCCTGCAGACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SCLMLLSDHTVL*AAAAAQALQTL Trigger: CAGAGTCTGCAGGGCCTGGGCGGCGGCTGCCGCCAACAGCACCGTGTGGTCTGATAAAAGCATCAGGCAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
||
| CDS CAA 90 bp | CACTTTGCCTCTTGCCTGATGCTTTTATCAGACCACACGGTGCTGTaGGCGGCAGCCGCCGCCCAGGCCCTGCAGACTCTGGTGGCTACA | + |
|
Preference number: 6 (lower is better) Translates to: HFASCLMLLSDHTVL*AAAAAQALQTLVAT Trigger: TGTAGCCACCAGAGTCTGCAGGGCCTGGGCGGCGGCTGCCGCCAACAGCACCGTGTGGTCTGATAAAAGCATCAGGCAAGAGGCAAAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126923.2 |
||
| CDS CAA 72 bp | TCACAACTGATGCTTTTATCAGACCACACGGTGCTGTaGGCGGCAGCCGCCGCCCAGGCCCTGCAGACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SQLMLLSDHTVL*AAAAAQALQTL Trigger: CAGAGTCTGCAGGGCCTGGGCGGCGGCTGCCGCCAACAGCACCGTGTGGTCTGATAAAAGCATCAGTTGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| CDS CAA 90 bp | AGCTCACAGTCACAACTGATGCTTTTATCAGACCACACGGTGCTGTaGGCGGCAGCCGCCGCCCAGGCCCTGCAGACTCTGGTGGCTACA | + |
|
Preference number: 6 (lower is better) Translates to: SSQSQLMLLSDHTVL*AAAAAQALQTLVAT Trigger: TGTAGCCACCAGAGTCTGCAGGGCCTGGGCGGCGGCTGCCGCCAACAGCACCGTGTGGTCTGATAAAAGCATCAGTTGTGACTGTGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| CDS TCA 72 bp | ATGGTGGCAACAAGTCTTCCAGCTCACAGTCACAACTaGTGCTTTTATCAGACCACACGGTGCTGTTGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: MVATSLPAHSHN*CFYQTTRCCWR Trigger: CCGCCAACAGCACCGTGTGGTCTGATAAAAGCATCAGTTGTGACTGTGAGCTGGAAGACTTGTTGCCACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
||
| CDS CCA 72 bp | GTTGTGAATGTGGTCCAGGCAGGAGGACAGATATGGTaGCAACAAGTCTTCCAGCTCACAGTCACAACTGAT | + |
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Preference number: 6 (lower is better) Translates to: VVNVVQAGGQIW*QQVFQLTVTTD Trigger: ATCAGTTGTGACTGTGAGCTGGAAGACTTGTTGCCACCATATCTGTCCTCCTGCCTGGACCACATTCACAAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036221.12 |
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