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Pregenerated sensors for FBXL7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000043556

Ensembl transcript IDs: ENSMUST00000059204.11

Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCTTGGCTTGCAGCAGGAAAGGCTTGGGCTGGGGGATAAACACTTaGAGAAGAAGATGGGTGAACCGTCCAGTGATGGGGAAGGTCAGA +
Preference number: 1 (lower is better)
Translates to: GLACSRKGLGWGINT*RRRWVNRPVMGKVR
Trigger: TCTGACCTTCCCCATCACTGGACGGTTCACCCATCTTCTTCTCCAAGTGTTTATCCCCCAGCCCAAGCCTTTCCTGCTGCAAGCCAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CCA 90 bp TGGTTCTCGGATGAGAGCAAAGGGAGACCTGAGCAGAACCCAGTGTaGACTTACCGAGCGCCCATGGAAACTCCTGAACGCACAACTCAT +
Preference number: 1 (lower is better)
Translates to: WFSDESKGRPEQNPV*TYRAPMETPERTTH
Trigger: ATGAGTTGTGCGTTCAGGAGTTTCCATGGGCGCTCGGTAAGTCCACACTGGGTTCTGCTCAGGTCTCCCTTTGCTCTCATCCGAGAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CCA 90 bp AAGGCAAAGAACGTTCAGAAGCCCAGCCCACCATTACAGTTGTGCTaGTTCTCGGATGAGAGCAAAGGGAGACCTGAGCAGAACCCAGTG +
Preference number: 1 (lower is better)
Translates to: KAKNVQKPSPPLQLC*FSDESKGRPEQNPV
Trigger: CACTGGGTTCTGCTCAGGTCTCCCTTTGCTCTCATCCGAGAACCAGCACAACTGTAATGGTGGGCTGGGCTTCTGAACGTTCTTTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR GCA 90 bp AACAAGGCAAAGAACGTTCAGAAGCCCAGCCCACCATTACAGTTGTaGTGGTTCTCGGATGAGAGCAAAGGGAGACCTGAGCAGAACCCA +
Preference number: 1 (lower is better)
Translates to: NKAKNVQKPSPPLQL*WFSDESKGRPEQNP
Trigger: TGGGTTCTGCTCAGGTCTCCCTTTGCTCTCATCCGAGAACCAGCACAACTGTAATGGTGGGCTGGGCTTCTGAACGTTCTTTGCCTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR GCA 90 bp AACAAAGAACCACGGCACCTGTCCCCGATGGCTGCAGGACAGATGTaGCTAAAGCATAGCAGATGTGCACTGAGAAGGTTTAGGAAAACC +
Preference number: 1 (lower is better)
Translates to: NKEPRHLSPMAAGQM*LKHSRCALRRFRKT
Trigger: GGTTTTCCTAAACCTTCTCAGTGCACATCTGCTATGCTTTAGGCACATCTGTCCTGCAGCCATCGGGGACAGGTGCCGTGGTTCTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CCA 90 bp AAGGGAGACCTGAGCAGAACCCAGTGTGGACTTACCGAGCGCCCATaGAAACTCCTGAACGCACAACTCATTTACATATCCAGTTCTCTC +
Preference number: 1 (lower is better)
Translates to: KGDLSRTQCGLTERP*KLLNAQLIYISSSL
Trigger: GAGAGAACTGGATATGTAAATGAGTTGTGCGTTCAGGAGTTTCCATGGGCGCTCGGTAAGTCCACACTGGGTTCTGCTCAGGTCTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR TCA 90 bp TGGCTCAGGGATCCACTTTGGACCCTCTGCTCATTCTGGGAGTATTaGACCAGATCATTTGGCAAGTCCCAGTGTCAAGGGTTACAGATA +
Preference number: 1 (lower is better)
Translates to: WLRDPLWTLCSFWEY*TRSFGKSQCQGLQI
Trigger: TATCTGTAACCCTTGACACTGGGACTTGCCAAATGATCTGGTTCAATACTCCCAGAATGAGCAGAGGGTCCAAAGTGGATCCCTGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR GCA 90 bp ACTCCTGAACGCACAACTCATTTACATATCCAGTTCTCTCACAAGTaGCACCTGTGTGTGACTTATACAGAGCTCTTCTGCTCAGCAGCA +
Preference number: 1 (lower is better)
Translates to: TPERTTHLHIQFSHK*HLCVTYTELFCSAA
Trigger: TGCTGCTGAGCAGAAGAGCTCTGTATAAGTCACACACAGGTGGCACTTGTGAGAGAACTGGATATGTAAATGAGTTGTGCGTTCAGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR GCA 90 bp AAAATTTATAAGGGTTCTTACTTGGGTTTGAAAATGCTCAGAGGATaGAAGTTGACAGAGATAGAGGCTTCCTGTGATGAGGCGCCCTCC +
Preference number: 1 (lower is better)
Translates to: KIYKGSYLGLKMLRG*KLTEIEASCDEAPS
Trigger: GGAGGGCGCCTCATCACAGGAAGCCTCTATCTCTGTCAACTTGCATCCTCTGAGCATTTTCAAACCCAAGTAAGAACCCTTATAAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CCA 90 bp TACAGAAAGAAAAATAGCTGCTGTGAATGGGTATGGGTGCTTACATaGGACACTTTTACAAAGCACTGTTTGGTTCTCATTGCGCCGTGG +
Preference number: 1 (lower is better)
Translates to: YRKKNSCCEWVWVLT*DTFTKHCLVLIAPW
Trigger: CCACGGCGCAATGAGAACCAAACAGTGCTTTGTAAAAGTGTCCCATGTAAGCACCCATACCCATTCACAGCAGCTATTTTTCTTTCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CCA 90 bp ACATCTGTTTCACATCCCTTAGTAGAAAACATGAAGACAGCGGGCTaGGCGGCATTCGTACAATTAAACACTTACAAACTTAACCCCAGG +
Preference number: 1 (lower is better)
Translates to: TSVSHPLVENMKTAG*AAFVQLNTYKLNPR
Trigger: CCTGGGGTTAAGTTTGTAAGTGTTTAATTGTACGAATGCCGCCCAGCCCGCTGTCTTCATGTTTTCTACTAAGGGATGTGAAACAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR TCA 90 bp GTGTGTCGCCTCTTCTCTGTGCCTGGCATCTTGAATGAACAATATTaGAACACCTGGACATCTGTTTCACATCCCTTAGTAGAAAACATG +
Preference number: 1 (lower is better)
Translates to: VCRLFSVPGILNEQY*NTWTSVSHPLVENM
Trigger: CATGTTTTCTACTAAGGGATGTGAAACAGATGTCCAGGTGTTTCAATATTGTTCATTCAAGATGCCAGGCACAGAGAAGAGGCGACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR TCA 90 bp ATCATTTGGCAAGTCCCAGTGTCAAGGGTTACAGATAAGCTATTGTaGCTCTCCAAATCACAAGATTTAGGTAAAGCCAAGGCCAGAGAG +
Preference number: 1 (lower is better)
Translates to: IIWQVPVSRVTDKLL*LSKSQDLGKAKARE
Trigger: CTCTCTGGCCTTGGCTTTACCTAAATCTTGTGATTTGGAGAGTCACAATAGCTTATCTGTAACCCTTGACACTGGGACTTGCCAAATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CCA 90 bp AGCCATGTTTCCAAACAGATAAAGTTCTTAATGAGGCCATTTGATTaGTCTCAAAAATCTGCTGAGCTGTTCCCAAGAACCTCTGTCACA +
Preference number: 1 (lower is better)
Translates to: SHVSKQIKFLMRPFD*SQKSAELFPRTSVT
Trigger: TGTGACAGAGGTTCTTGGGAACAGCTCAGCAGATTTTTGAGACCAATCAAATGGCCTCATTAAGAACTTTATCTGTTTGGAAACATGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR GCA 90 bp AAGAACCTTACAGAAAGAAAAATAGCTGCTGTGAATGGGTATGGGTaGTTACATGGGACACTTTTACAAAGCACTGTTTGGTTCTCATTG +
Preference number: 1 (lower is better)
Translates to: KNLTERKIAAVNGYG*LHGTLLQSTVWFSL
Trigger: CAATGAGAACCAAACAGTGCTTTGTAAAAGTGTCCCATGTAAGCACCCATACCCATTCACAGCAGCTATTTTTCTTTCTGTAAGGTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR-3UTR CCA 90 bp CACAGATCCATACCTCCACCCTGGTGGAGAGCAGAGAGCACGAAGAAGATGGGGCGCTGGGGTGTAGCTTaGGGACAGGAGGGGAGAGGG +
Preference number: 2 (lower is better)
Translates to: HRSIPPPWWRAESTKKMGRWGVA*GQEGRG
Trigger: CCCTCTCCCCTCCTGTCCCCAAGCTACACCCCAGCG...CCCCATCTTCTTCGTGCTCTCTGCTCTCCACCAGGGTGGAGGTATGGATCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR-3UTR GCA 90 bp GAACCACGGCACCTGTCCCCGATGGCTGCAGGACAGATGTGCCTAAAGCATAGCCTGTTTGGTTCTCATTaGGCCGTGGGAGCTGTCCCT +
Preference number: 2 (lower is better)
Translates to: EPRHLSPMAAGQMCLKHSLFGSH*AVGAVP
Trigger: AGGGACAGCTCCCACGGCGCAATGAGAACCAAACAG...GCTATGCTTTAGGCACATCTGTCCTGCAGCCATCGGGGACAGGTGCCGTGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR-3UTR GCA 90 bp GGTGGATCAGCTTCTGTCTCACCAGTGTGTCGCCTCTTCTCTGTGCCTGGCATCGGAAGGGCGAGGGAATaGGAGAGCACGTGTGGATGT +
Preference number: 2 (lower is better)
Translates to: GGSASVSPVCRLFSVPGIGRARE*ESTCGC
Trigger: ACATCCACACGTGCTCTCGCATTCCCTCGCCCTTCC...GATGCCAGGCACAGAGAAGAGGCGACACACTGGTGAGACAGAAGCTGATCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR-3UTR TCA 90 bp CTTGGCTTGCAGCAGGAAAGGCTTGGGCTGGGGGATAAACACTTGGAGAAGAAGGAGCAAAGGGAGACCTaGGCAGAACCCAGTGTGGAC +
Preference number: 2 (lower is better)
Translates to: LGLQQERLGLGDKHLEKKEQRET*AEPSVD
Trigger: GTCCACACTGGGTTCTGCTCAGGTCTCCCTTTGCTC...CTTCTTCTCCAAGTGTTTATCCCCCAGCCCAAGCCTTTCCTGCTGCAAGCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CAA 90 bp GAGCTCTTCTGCTCAGCAGCATCTCTGAGCAGAGCATCTCTCAGTTaGAAAATGGGCCGAAGGCTAATCCCTCACCTCTGGGCTCTGGTG +
Preference number: 2 (lower is better)
Translates to: ELFCSAASLSRASLS*KMGRRLIPHLWALV
Trigger: CACCAGAGCCCAGAGGTGAGGGATTAGCCTTCGGCCCATTTTCAAACTGAGAGATGCTCTGCTCAGAGATGCTGCTGAGCAGAAGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR-3UTR GCA 90 bp CTGAGCAGAACCCAGTGTGGACTTACCGAGCGCCCATGGAAACTCCTGAACGCATATACAGAGCTCTTCTaGTCAGCAGCATCTCTGAGC +
Preference number: 2 (lower is better)
Translates to: LSRTQCGLTERPWKLLNAYTELF*SAASLS
Trigger: GCTCAGAGATGCTGCTGAGCAGAAGAGCTCTGTATA...TGCGTTCAGGAGTTTCCATGGGCGCTCGGTAAGTCCACACTGGGTTCTGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR-3UTR GCA 90 bp CCATACCTCCACCCTGGTGGAGAGCAGAGAGCACGAAGAAGATGGGGAAGGAAGGCTGCAGGACAGATGTaGCTAAAGCATAGCAGATGT +
Preference number: 2 (lower is better)
Translates to: PYLHPGGEQRARRRWGRKAAGQM*LKHSRC
Trigger: ACATCTGCTATGCTTTAGGCACATCTGTCCTGCAGC...CTTCCTTCCCCATCTTCTTCGTGCTCTCTGCTCTCCACCAGGGTGGAGGTATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR-3UTR CCA 90 bp AGACATATGTGCTGGGCAGGCAGCAAGTTGGAAATGTCCCTTGGGTCTCACATGGAGAGTATGGAACGCTaGGGTGTAGCTTGGGGACAG +
Preference number: 2 (lower is better)
Translates to: RHMCWAGSKLEMSLGSHMESMER*GVAWGQ
Trigger: CTGTCCCCAAGCTACACCCCAGCGTTCCATACTCTC...CATGTGAGACCCAAGGGACATTTCCAACTTGCTGCCTGCCCAGCACATATGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR-3UTR CCA 90 bp CCATACCTCCACCCTGGTGGAGAGCAGAGAGCACGAAGAAGATGGGGAAGGAAGCAGCTGCTTCAGGGTTaGAAGAAGAGAGTATGGAAC +
Preference number: 2 (lower is better)
Translates to: PYLHPGGEQRARRRWGRKQLLQG*KKRVWN
Trigger: GTTCCATACTCTCTTCTTCCAACCCTGAAGCAGCTG...CTTCCTTCCCCATCTTCTTCGTGCTCTCTGCTCTCCACCAGGGTGGAGGTATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CAA 90 bp TCCAACAAGGCAAAGAACGTTCAGAAGCCCAGCCCACCATTACAGTaGTGCTGGTTCTCGGATGAGAGCAAAGGGAGACCTGAGCAGAAC +
Preference number: 2 (lower is better)
Translates to: SNKAKNVQKPSPPLQ*CWFSDESKGRPEQN
Trigger: GTTCTGCTCAGGTCTCCCTTTGCTCTCATCCGAGAACCAGCACAACTGTAATGGTGGGCTGGGCTTCTGAACGTTCTTTGCCTTGTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR-3UTR TCA 90 bp TTACAGTTGTGCTGGTTCTCGGATGAGAGCAAAGGGAGACCTGAGCAGAACCCAGCTCAGCAGCATCTCTaGGCAGAGCATCTCTCAGTT +
Preference number: 2 (lower is better)
Translates to: LQLCWFSDESKGRPEQNPAQQHL*AEHLSV
Trigger: AACTGAGAGATGCTCTGCTCAGAGATGCTGCTGAGC...TGGGTTCTGCTCAGGTCTCCCTTTGCTCTCATCCGAGAACCAGCACAACTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR-3UTR GCA 90 bp CCATACCTCCACCCTGGTGGAGAGCAGAGAGCACGAAGAAGATGGGGAAGGAAGCAGTTCTCTCACAAGTaGCACCTGTGTGTGACTTAT +
Preference number: 2 (lower is better)
Translates to: PYLHPGGEQRARRRWGRKQFSHK*HLCVTY
Trigger: ATAAGTCACACACAGGTGGCACTTGTGAGAGAACTG...CTTCCTTCCCCATCTTCTTCGTGCTCTCTGCTCTCCACCAGGGTGGAGGTATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR-3UTR TCA 90 bp CCATACCTCCACCCTGGTGGAGAGCAGAGAGCACGAAGAAGATGGGGAAGGAAGCTCCCCTTCATTATTTaGCCTCTTTTGCTCATGAGA +
Preference number: 2 (lower is better)
Translates to: PYLHPGGEQRARRRWGRKLPFII*PLLLMR
Trigger: TCTCATGAGCAAAAGAGGTCAAATAATGAAGGGGAG...CTTCCTTCCCCATCTTCTTCGTGCTCTCTGCTCTCCACCAGGGTGGAGGTATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR-3UTR TCA 90 bp TTACAGTTGTGCTGGTTCTCGGATGAGAGCAAAGGGAGACCTGAGCAGAACCCAGCAATCTCAGAAAGGTaGGGGGTTTTGACCAAGGTG +
Preference number: 2 (lower is better)
Translates to: LQLCWFSDESKGRPEQNPAISER*GVLTKV
Trigger: CACCTTGGTCAAAACCCCTCACCTTTCTGAGATTGC...TGGGTTCTGCTCAGGTCTCCCTTTGCTCTCATCCGAGAACCAGCACAACTGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR-3UTR TCA 90 bp CACAGATCCATACCTCCACCCTGGTGGAGAGCAGAGAGCACGAAGAAGATGGGGGATGATGGTGTGAACTaGAGAGTAAACTGTGACTCA +
Preference number: 2 (lower is better)
Translates to: HRSIPPPWWRAESTKKMGDDGVN*RVNCDS
Trigger: TGAGTCACAGTTTACTCTTCAGTTCACACCATCATC...CCCCATCTTCTTCGTGCTCTCTGCTCTCCACCAGGGTGGAGGTATGGATCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CAA 90 bp TTTAGAGAGCCTTCTTCAACGCTTAATGTTGCAGCTGCTTCAGGGTaGGAAGAAGAGAGTATGGAACGCTGGGGTGTAGCTTGGGGACAG +
Preference number: 2 (lower is better)
Translates to: FREPSSTLNVAAASG*EEESMERWGVAWGQ
Trigger: CTGTCCCCAAGCTACACCCCAGCGTTCCATACTCTCTTCTTCCAACCCTGAAGCAGCTGCAACATTAAGCGTTGAAGAAGGCTCTCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CAA 90 bp GAAGGAAGAAACTGGGAAAGACATATGTGCTGGGCAGGCAGCAAGTaGGAAATGTCCCTTGGGTCTCACATGACAGACAGCTCAGGTGAT +
Preference number: 2 (lower is better)
Translates to: EGRNWERHMCWAGSK*EMSLGSHMTDSSGD
Trigger: ATCACCTGAGCTGTCTGTCATGTGAGACCCAAGGGACATTTCCAACTTGCTGCCTGCCCAGCACATATGTCTTTCCCAGTTTCTTCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR-3UTR GCA 90 bp CCATACCTCCACCCTGGTGGAGAGCAGAGAGCACGAAGAAGATGGGGAAGGAAGAAAATGCTCAGAGGATaGAAGTTGACAGAGATAGAG +
Preference number: 2 (lower is better)
Translates to: PYLHPGGEQRARRRWGRKKMLRG*KLTEIE
Trigger: CTCTATCTCTGTCAACTTGCATCCTCTGAGCATTTT...CTTCCTTCCCCATCTTCTTCGTGCTCTCTGCTCTCCACCAGGGTGGAGGTATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CAA 90 bp ATGGCTCAGGGATCCACTTTGGACCCTCTGCTCATTCTGGGAGTATaGAACCAGATCATTTGGCAAGTCCCAGTGTCAAGGGTTACAGAT +
Preference number: 2 (lower is better)
Translates to: MAQGSTLDPLLILGV*NQIIWQVPVSRVTD
Trigger: ATCTGTAACCCTTGACACTGGGACTTGCCAAATGATCTGGTTCAATACTCCCAGAATGAGCAGAGGGTCCAAAGTGGATCCCTGAGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR-3UTR CCA 90 bp CTTGGCTTGCAGCAGGAAAGGCTTGGGCTGGGGGATAAACACTTGGAGAAGAAGGTATGGGTGCTTACATaGGACACTTTTACAAAGCAC +
Preference number: 2 (lower is better)
Translates to: LGLQQERLGLGDKHLEKKVWVLT*DTFTKH
Trigger: GTGCTTTGTAAAAGTGTCCCATGTAAGCACCCATAC...CTTCTTCTCCAAGTGTTTATCCCCCAGCCCAAGCCTTTCCTGCTGCAAGCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR-3UTR CCA 90 bp AACAAAACCGAAACTAGCAAATTGGTTTCTATTCAGAACGGACCACTTAAGAGCGGCACCTGTCCCCGATaGCTGCAGGACAGATGTGCC +
Preference number: 2 (lower is better)
Translates to: NKTETSKLVSIQNGPLKSGTCPR*LQDRCA
Trigger: GGCACATCTGTCCTGCAGCCATCGGGGACAGGTGCC...GCTCTTAAGTGGTCCGTTCTGAATAGAAACCAATTTGCTAGTTTCGGTTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CAA 90 bp TATAAGGGTTCTTACTTGGGTTTGAAAATGCTCAGAGGATGCAAGTaGACAGAGATAGAGGCTTCCTGTGATGAGGCGCCCTCCTGTCTG +
Preference number: 2 (lower is better)
Translates to: YKGSYLGLKMLRGCK*TEIEASCDEAPSCL
Trigger: CAGACAGGAGGGCGCCTCATCACAGGAAGCCTCTATCTCTGTCAACTTGCATCCTCTGAGCATTTTCAAACCCAAGTAAGAACCCTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR-3UTR CCA 90 bp GTAATATTCTGTTCCAAGACTGTGGTGGGTGGATCAGCTTCTGTCTCACCAGTGTTACAAAGCACTGTTTaGTTCTCATTGCGCCGTGGG +
Preference number: 2 (lower is better)
Translates to: VIFCSKTVVGGSASVSPVLQSTV*FSLRRG
Trigger: CCCACGGCGCAATGAGAACCAAACAGTGCTTTGTAA...CACTGGTGAGACAGAAGCTGATCCACCCACCACAGTCTTGGAACAGAATATTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR-3UTR CCA 90 bp AGACATATGTGCTGGGCAGGCAGCAAGTTGGAAATGTCCCTTGGGTCTCACATGACCATGGTAGAAATTTaGGGCTCCCCTTCATTATTT +
Preference number: 2 (lower is better)
Translates to: RHMCWAGSKLEMSLGSHMTMVEI*GSPSLF
Trigger: AAATAATGAAGGGGAGCCCCAAATTTCTACCATGGT...CATGTGAGACCCAAGGGACATTTCCAACTTGCTGCCTGCCCAGCACATATGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR-3UTR GCA 90 bp GTAATATTCTGTTCCAAGACTGTGGTGGGTGGATCAGCTTCTGTCTCACCAGTGAGAAAGAAAAATAGCTaGTGTGAATGGGTATGGGTG +
Preference number: 2 (lower is better)
Translates to: VIFCSKTVVGGSASVSPVRKKNS*CEWVWV
Trigger: CACCCATACCCATTCACAGCAGCTATTTTTCTTTCT...CACTGGTGAGACAGAAGCTGATCCACCCACCACAGTCTTGGAACAGAATATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR-3UTR CCA 90 bp AACAAAACCGAAACTAGCAAATTGGTTTCTATTCAGAACGGACCACTTAAGAGCACCTCTGGGCTCTGGTaGTGGCAATCTCAGAAAGGT +
Preference number: 2 (lower is better)
Translates to: NKTETSKLVSIQNGPLKSTSGLW*WQSQKG
Trigger: ACCTTTCTGAGATTGCCACCACCAGAGCCCAGAGGT...GCTCTTAAGTGGTCCGTTCTGAATAGAAACCAATTTGCTAGTTTCGGTTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CCA 72 bp TCCTGTGATGAGGCGCCCTCCTGTCTGAGTCGGGCGTaGAAGGGCGAGGGAATGCGAGAGCACGTGTGGATG +
Preference number: 3 (lower is better)
Translates to: SCDEAPSCLSRA*KGEGMREHVWM
Trigger: CATCCACACGTGCTCTCGCATTCCCTCGCCCTTCCACGCCCGACTCAGACAGGAGGGCGCCTCATCACAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CCA 72 bp GATGAGAGCAAAGGGAGACCTGAGCAGAACCCAGTGTaGACTTACCGAGCGCCCATGGAAACTCCTGAACGC +
Preference number: 3 (lower is better)
Translates to: DESKGRPEQNPV*TYRAPMETPER
Trigger: GCGTTCAGGAGTTTCCATGGGCGCTCGGTAAGTCCACACTGGGTTCTGCTCAGGTCTCCCTTTGCTCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR GCA 72 bp CCACGGCACCTGTCCCCGATGGCTGCAGGACAGATGTaGCTAAAGCATAGCAGATGTGCACTGAGAAGGTTT +
Preference number: 3 (lower is better)
Translates to: PRHLSPMAAGQM*LKHSRCALRRF
Trigger: AAACCTTCTCAGTGCACATCTGCTATGCTTTAGGCACATCTGTCCTGCAGCCATCGGGGACAGGTGCCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CCA 72 bp TGCAGCAGGAAAGGCTTGGGCTGGGGGATAAACACTTaGAGAAGAAGATGGGTGAACCGTCCAGTGATGGGG +
Preference number: 3 (lower is better)
Translates to: CSRKGLGWGINT*RRRWVNRPVMG
Trigger: CCCCATCACTGGACGGTTCACCCATCTTCTTCTCCAAGTGTTTATCCCCCAGCCCAAGCCTTTCCTGCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CCA 72 bp CCCAAGAACCTCTGTCACAGATCCATACCTCCACCCTaGTGGAGAGCAGAGAGCACGAAGAAGATGGGGAAG +
Preference number: 3 (lower is better)
Translates to: PKNLCHRSIPPP*WRAESTKKMGK
Trigger: CTTCCCCATCTTCTTCGTGCTCTCTGCTCTCCACCAGGGTGGAGGTATGGATCTGTGACAGAGGTTCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR-3UTR CAA 90 bp CCATACCTCCACCCTGGTGGAGAGCAGAGAGCACGAAGAAGATGGGGAAGGAAGGCAGCTGCTTCAGGGTaGGAAGAAGAGAGTATGGAA +
Preference number: 3 (lower is better)
Translates to: PYLHPGGEQRARRRWGRKAAASG*EEESME
Trigger: TTCCATACTCTCTTCTTCCAACCCTGAAGCAGCTGC...CTTCCTTCCCCATCTTCTTCGTGCTCTCTGCTCTCCACCAGGGTGGAGGTATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CCA 72 bp GTAGCAGGCTTGGCTTGCAGCAGGAAAGGCTTGGGCTaGGGGATAAACACTTGGAGAAGAAGATGGGTGAAC +
Preference number: 3 (lower is better)
Translates to: VAGLACSRKGLG*GINTWRRRWVN
Trigger: GTTCACCCATCTTCTTCTCCAAGTGTTTATCCCCCAGCCCAAGCCTTTCCTGCTGCAAGCCAAGCCTGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR-3UTR CAA 90 bp CCATACCTCCACCCTGGTGGAGAGCAGAGAGCACGAAGAAGATGGGGAAGGAAGAGAGCATCTCTCAGTTaGAAAATGGGCCGAAGGCTA +
Preference number: 3 (lower is better)
Translates to: PYLHPGGEQRARRRWGRKRASLS*KMGRRL
Trigger: TAGCCTTCGGCCCATTTTCAAACTGAGAGATGCTCT...CTTCCTTCCCCATCTTCTTCGTGCTCTCTGCTCTCCACCAGGGTGGAGGTATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR-3UTR CAA 90 bp AAGAACCTCTGTCACAGATCCATACCTCCACCCTGGTGGAGAGCAGAGAGCACGTTTACAAAGCACTGTTaGGTTCTCATTGCGCCGTGG +
Preference number: 3 (lower is better)
Translates to: KNLCHRSIPPPWWRAESTFTKHC*VLIAPW
Trigger: CCACGGCGCAATGAGAACCAAACAGTGCTTTGTAAA...CGTGCTCTCTGCTCTCCACCAGGGTGGAGGTATGGATCTGTGACAGAGGTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CCA 72 bp CTGAGCAGAACCCAGTGTGGACTTACCGAGCGCCCATaGAAACTCCTGAACGCACAACTCATTTACATATCC +
Preference number: 3 (lower is better)
Translates to: LSRTQCGLTERP*KLLNAQLIYIS
Trigger: GGATATGTAAATGAGTTGTGCGTTCAGGAGTTTCCATGGGCGCTCGGTAAGTCCACACTGGGTTCTGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CCA 72 bp CCAACACAAGACAAGAGTACACACCGGAGCCTACAGTaGGAGTGCAGTTGTCGAGCTGTGTATAAGCTTGGT +
Preference number: 3 (lower is better)
Translates to: PTQDKSTHRSLQ*ECSCRAVYKLG
Trigger: ACCAAGCTTATACACAGCTCGACAACTGCACTCCCACTGTAGGCTCCGGTGTGTACTCTTGTCTTGTGTTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR TCA 72 bp CCCAGTGTGGACTTACCGAGCGCCCATGGAAACTCCTaGACGCACAACTCATTTACATATCCAGTTCTCTCA +
Preference number: 3 (lower is better)
Translates to: PSVDLPSAHGNS*THNSFTYPVLS
Trigger: TGAGAGAACTGGATATGTAAATGAGTTGTGCGTTCAGGAGTTTCCATGGGCGCTCGGTAAGTCCACACTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR TCA 72 bp GATCCACTTTGGACCCTCTGCTCATTCTGGGAGTATTaGACCAGATCATTTGGCAAGTCCCAGTGTCAAGGG +
Preference number: 3 (lower is better)
Translates to: DPLWTLCSFWEY*TRSFGKSQCQG
Trigger: CCCTTGACACTGGGACTTGCCAAATGATCTGGTTCAATACTCCCAGAATGAGCAGAGGGTCCAAAGTGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR GCA 72 bp AAGTGCCACCTGTGTGTGACTTATACAGAGCTCTTCTaGTCAGCAGCATCTCTGAGCAGAGCATCTCTCAGT +
Preference number: 3 (lower is better)
Translates to: KCHLCVTYTELF*SAASLSRASLS
Trigger: ACTGAGAGATGCTCTGCTCAGAGATGCTGCTGAGCAGAAGAGCTCTGTATAAGTCACACACAGGTGGCACTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR-3UTR CAA 90 bp CACTTTGGACCCTCTGCTCATTCTGGGAGTATTGAACCAGATCATTTGGCAAGTCTCAGAGGATGCAAGTaGACAGAGATAGAGGCTTCC +
Preference number: 3 (lower is better)
Translates to: HFGPSAHSGSIEPDHLASLRGCK*TEIEAS
Trigger: GGAAGCCTCTATCTCTGTCAACTTGCATCCTCTGAG...ACTTGCCAAATGATCTGGTTCAATACTCCCAGAATGAGCAGAGGGTCCAAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR-3UTR CAA 90 bp GTTCTCTCACAAGTGCCACCTGTGTGTGACTTATACAGAGCTCTTCTGCTCAGCTTAACCATAATTTGCTaGGTGTGGGATTTAGGCGTG +
Preference number: 3 (lower is better)
Translates to: VLSQVPPVCDLYRALLLSLTIIC*VWDLGV
Trigger: CACGCCTAAATCCCACACCAAGCAAATTATGGTTAA...GCTGAGCAGAAGAGCTCTGTATAAGTCACACACAGGTGGCACTTGTGAGAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR TCA 72 bp TACATATCCAGTTCTCTCACAAGTGCCACCTGTGTGTaGCTTATACAGAGCTCTTCTGCTCAGCAGCATCTC +
Preference number: 3 (lower is better)
Translates to: YISSSLTSATCV*LIQSSSAQQHL
Trigger: GAGATGCTGCTGAGCAGAAGAGCTCTGTATAAGTCACACACAGGTGGCACTTGTGAGAGAACTGGATATGTA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR GCA 72 bp CGCACAACTCATTTACATATCCAGTTCTCTCACAAGTaGCACCTGTGTGTGACTTATACAGAGCTCTTCTGC +
Preference number: 3 (lower is better)
Translates to: RTTHLHIQFSHK*HLCVTYTELFC
Trigger: GCAGAAGAGCTCTGTATAAGTCACACACAGGTGGCACTTGTGAGAGAACTGGATATGTAAATGAGTTGTGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CCA 72 bp AATGATTGTAATATTCTGTTCCAAGACTGTGGTGGGTaGATCAGCTTCTGTCTCACCAGTGTGTCGCCTCTT +
Preference number: 3 (lower is better)
Translates to: NDCNILFQDCGG*ISFCLTSVSPL
Trigger: AAGAGGCGACACACTGGTGAGACAGAAGCTGATCCACCCACCACAGTCTTGGAACAGAATATTACAATCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CCA 72 bp CCTCTGCTCATTCTGGGAGTATTGAACCAGATCATTTaGCAAGTCCCAGTGTCAAGGGTTACAGATAAGCTA +
Preference number: 3 (lower is better)
Translates to: PLLILGVLNQII*QVPVSRVTDKL
Trigger: TAGCTTATCTGTAACCCTTGACACTGGGACTTGCCAAATGATCTGGTTCAATACTCCCAGAATGAGCAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CCA 72 bp TCACATCCCTTAGTAGAAAACATGAAGACAGCGGGCTaGGCGGCATTCGTACAATTAAACACTTACAAACTT +
Preference number: 3 (lower is better)
Translates to: SHPLVENMKTAG*AAFVQLNTYKL
Trigger: AAGTTTGTAAGTGTTTAATTGTACGAATGCCGCCCAGCCCGCTGTCTTCATGTTTTCTACTAAGGGATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR TCA 72 bp CTCTTCTCTGTGCCTGGCATCTTGAATGAACAATATTaGAACACCTGGACATCTGTTTCACATCCCTTAGTA +
Preference number: 3 (lower is better)
Translates to: LFSVPGILNEQY*NTWTSVSHPLV
Trigger: TACTAAGGGATGTGAAACAGATGTCCAGGTGTTTCAATATTGTTCATTCAAGATGCCAGGCACAGAGAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR TCA 72 bp AATGTCCCTTGGGTCTCACATGACAGACAGCTCAGGTaGTGTACTCTGTCAGTGGTGATAAAATTATTCAAA +
Preference number: 3 (lower is better)
Translates to: NVPWVSHDRQLR*CTLSVVIKLFK
Trigger: TTTGAATAATTTTATCACCACTGACAGAGTACATCACCTGAGCTGTCTGTCATGTGAGACCCAAGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR GCA 72 bp ACAGAAAGAAAAATAGCTGCTGTGAATGGGTATGGGTaGTTACATGGGACACTTTTACAAAGCACTGTTTGG +
Preference number: 3 (lower is better)
Translates to: TERKIAAVNGYG*LHGTLLQSTVW
Trigger: CCAAACAGTGCTTTGTAAAAGTGTCCCATGTAAGCACCCATACCCATTCACAGCAGCTATTTTTCTTTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR TCA 72 bp AGGTGCAGCCTTGGTGACATTTATCTAAAAATTAACTaGCTAGGAAGAGTTTACCATGGTAGAAATTTGGGG +
Preference number: 3 (lower is better)
Translates to: RCSLGDIYLKIN*LGRVYHGRNLG
Trigger: CCCCAAATTTCTACCATGGTAAACTCTTCCTAGTCAGTTAATTTTTAGATAAATGTCACCAAGGCTGCACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR TCA 72 bp TTAAGGCTTTCTAGAGTCATACAGCACGACATGATGTaGACATTAGAATTAAAGAGAAATGGACAAACAAAC +
Preference number: 3 (lower is better)
Translates to: LRLSRVIQHDMM*TLELKRNGQTN
Trigger: GTTTGTTTGTCCATTTCTCTTTAATTCTAATGTTCACATCATGTCGTGCTGTATGACTCTAGAAAGCCTTAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR TCA 90 bp CACAGATCCATACCTCCACCCTGGTGGAGAGCAGAGAGCACGAAGAAGATGGGGCCACACCATGGTCCGTaGTGCCCTCGCAGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: HRSIPPPWWRAESTKKMGPHHGP*CPRSPS
Trigger: CGAGGGGCTGCGAGGGCATCACGGACCATGGTGTGG...CCCCATCTTCTTCGTGCTCTCTGCTCTCCACCAGGGTGGAGGTATGGATCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR TCA 90 bp CCATACCTCCACCCTGGTGGAGAGCAGAGAGCACGAAGAAGATGGGGAAGGAAGGTCGGGGGCGGGGAGTaGACCATAGCCACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: PYLHPGGEQRARRRWGRKVGGGE*TIATVS
Trigger: GGAGACAGTGGCTATGGTTCACTCCCCGCCCCCGAC...CTTCCTTCCCCATCTTCTTCGTGCTCTCTGCTCTCCACCAGGGTGGAGGTATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR TCA 90 bp CTTGGCTTGCAGCAGGAAAGGCTTGGGCTGGGGGATAAACACTTGGAGAAGAAGAGCCGAATGAGTGGGTaGGTGAGGCGGGTCGGGGGC +
Preference number: 4 (lower is better)
Translates to: LGLQQERLGLGDKHLEKKSRMSG*VRRVGG
Trigger: GCCCCCGACCCGCCTCACTCACCCACTCATTCGGCT...CTTCTTCTCCAAGTGTTTATCCCCCAGCCCAAGCCTTTCCTGCTGCAAGCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR GCA 90 bp CCATACCTCCACCCTGGTGGAGAGCAGAGAGCACGAAGAAGATGGGGAAGGAAGAGGCTGGGCTGGGCGTaGTCAGTGTGCGCATGCTCA +
Preference number: 4 (lower is better)
Translates to: PYLHPGGEQRARRRWGRKRLGWA*SVCACS
Trigger: TGAGCATGCGCACACTGAGCACGCCCAGCCCAGCCT...CTTCCTTCCCCATCTTCTTCGTGCTCTCTGCTCTCCACCAGGGTGGAGGTATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CCA 90 bp GAACCACGGCACCTGTCCCCGATGGCTGCAGGACAGATGTGCCTAAAGCATAGCACGATCTGCAGGCCCTaGCCGGTGATGCTCTCACAG +
Preference number: 4 (lower is better)
Translates to: EPRHLSPMAAGQMCLKHSTICRP*PVMLSQ
Trigger: CTGTGAGAGCATCACCGGCCAGGGCCTGCAGATCGT...GCTATGCTTTAGGCACATCTGTCCTGCAGCCATCGGGGACAGGTGCCGTGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR TCA 90 bp CCATACCTCCACCCTGGTGGAGAGCAGAGAGCACGAAGAAGATGGGGAAGGAAGCCTCCCGGGTCAAGCTaGTGCAGGTCACTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: PYLHPGGEQRARRRWGRKPPGSS*CRSLWS
Trigger: GCTCCAAAGTGACCTGCATCAGCTTGACCCGGGAGG...CTTCCTTCCCCATCTTCTTCGTGCTCTCTGCTCTCCACCAGGGTGGAGGTATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR GCA 90 bp AAGAACCTCTGTCACAGATCCATACCTCCACCCTGGTGGAGAGCAGAGAGCACGTTGGCAGCCACGATCTaGAGGCCCTGGCCGGTGATG +
Preference number: 4 (lower is better)
Translates to: KNLCHRSIPPPWWRAESTLAATI*RPWPVM
Trigger: CATCACCGGCCAGGGCCTGCAGATCGTGGCTGCCAA...CGTGCTCTCTGCTCTCCACCAGGGTGGAGGTATGGATCTGTGACAGAGGTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CCA 90 bp GAACCACGGCACCTGTCCCCGATGGCTGCAGGACAGATGTGCCTAAAGCATAGCACATTGGGGGTGTCCTaGCAAAGCCTGCGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: EPRHLSPMAAGQMCLKHSTLGVS*QSLRVS
Trigger: ACTGACCCGCAGGCTTTGCCAGGACACCCCCAATGT...GCTATGCTTTAGGCACATCTGTCCTGCAGCCATCGGGGACAGGTGCCGTGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CCA 90 bp CACAGATCCATACCTCCACCCTGGTGGAGAGCAGAGAGCACGAAGAAGATGGGGGCAGGTCGAAGCAGTTaGCAGCCACGATCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: HRSIPPPWWRAESTKKMGAGRSS*QPRSAG
Trigger: GCCTGCAGATCGTGGCTGCCAACTGCTTCGACCTGC...CCCCATCTTCTTCGTGCTCTCTGCTCTCCACCAGGGTGGAGGTATGGATCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR TCA 90 bp GGTGGATCAGCTTCTGTCTCACCAGTGTGTCGCCTCTTCTCTGTGCCTGGCATCCCACTGTCTCCCCGGTaGTGGAGGATGAAGATGTGG +
Preference number: 4 (lower is better)
Translates to: GGSASVSPVCRLFSVPGIPLSPR*WRMKMW
Trigger: CCACATCTTCATCCTCCATCACCGGGGAGACAGTGG...GATGCCAGGCACAGAGAAGAGGCGACACACTGGTGAGACAGAAGCTGATCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CCA 90 bp GAACCACGGCACCTGTCCCCGATGGCTGCAGGACAGATGTGCCTAAAGCATAGCCCAGATGCTCCAGGTTaGGACAGAGTGACACCACAT +
Preference number: 4 (lower is better)
Translates to: EPRHLSPMAAGQMCLKHSPDAPG*DRVTPH
Trigger: ATGTGGTGTCACTCTGTCCCAACCTGGAGCATCTGG...GCTATGCTTTAGGCACATCTGTCCTGCAGCCATCGGGGACAGGTGCCGTGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR TCA 90 bp CTTGGCTTGCAGCAGGAAAGGCTTGGGCTGGGGGATAAACACTTGGAGAAGAAGGTGAGCTGCGTGCAGTaGGCTGCGATGGTGTGTAAG +
Preference number: 4 (lower is better)
Translates to: LGLQQERLGLGDKHLEKKVSCVQ*AAMVCK
Trigger: CTTACACACCATCGCAGCTCACTGCACGCAGCTCAC...CTTCTTCTCCAAGTGTTTATCCCCCAGCCCAAGCCTTTCCTGCTGCAAGCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR TCA 90 bp AGCCTTCTTCAACGCTTAATGTTGCAGCTGCTTCAGGGTTGGAAGAAGAGAGTAGGAGACCCTCATCTGTaGGGCGGACGCAGCGGCGCA +
Preference number: 4 (lower is better)
Translates to: SLLQRLMLQLLQGWKKRVGDPHL*GGRSGA
Trigger: TGCGCCGCTGCGTCCGCCTCACAGATGAGGGTCTCC...TACTCTCTTCTTCCAACCCTGAAGCAGCTGCAACATTAAGCGTTGAAGAAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CCA 90 bp GTAATATTCTGTTCCAAGACTGTGGTGGGTGGATCAGCTTCTGTCTCACCAGTGGGCGAGCCGAATGAGTaGGTGAGTGAGGCGGGTCGG +
Preference number: 4 (lower is better)
Translates to: VIFCSKTVVGGSASVSPVGEPNE*VSEAGR
Trigger: CCGACCCGCCTCACTCACCCACTCATTCGGCTCGCC...CACTGGTGAGACAGAAGCTGATCCACCCACCACAGTCTTGGAACAGAATATTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CCA 90 bp TTACAGTTGTGCTGGTTCTCGGATGAGAGCAAAGGGAGACCTGAGCAGAACCCACTGGCTTGCTCTTTCTaGGGTCTGGAGGCGAGCCGA +
Preference number: 4 (lower is better)
Translates to: LQLCWFSDESKGRPEQNPLACSF*GLEASR
Trigger: TCGGCTCGCCTCCAGACCCCAGAAAGAGCAAGCCAG...TGGGTTCTGCTCAGGTCTCCCTTTGCTCTCATCCGAGAACCAGCACAACTGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CCA 90 bp CACAGATCCATACCTCCACCCTGGTGGAGAGCAGAGAGCACGAAGAAGATGGGGAGCGACATAGCTGGTTaGTGGGCAGGAAGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: HRSIPPPWWRAESTKKMGSDIAG*WAGRRR
Trigger: TCTTCTCCTTCCTGCCCACCAACCAGCTATGTCGCT...CCCCATCTTCTTCGTGCTCTCTGCTCTCCACCAGGGTGGAGGTATGGATCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR TCA 90 bp GGTGGATCAGCTTCTGTCTCACCAGTGTGTCGCCTCTTCTCTGTGCCTGGCATCGAACCCCTTCCATTCTaGAATCCTGGCAAAGTCGGT +
Preference number: 4 (lower is better)
Translates to: GGSASVSPVCRLFSVPGIEPLPF*NPGKVG
Trigger: ACCGACTTTGCCAGGATTTCAGAATGGAAGGGGTTC...GATGCCAGGCACAGAGAAGAGGCGACACACTGGTGAGACAGAAGCTGATCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR TCA 90 bp TTACAGTTGTGCTGGTTCTCGGATGAGAGCAAAGGGAGACCTGAGCAGAACCCACGCAGCCCCTCGCATTaGGGTAGCGTAATTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LQLCWFSDESKGRPEQNPRSPSH*GSVICC
Trigger: GCAGCAAATTACGCTACCTCAATGCGAGGGGCTGCG...TGGGTTCTGCTCAGGTCTCCCTTTGCTCTCATCCGAGAACCAGCACAACTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR GCA 90 bp CCATACCTCCACCCTGGTGGAGAGCAGAGAGCACGAAGAAGATGGGGAAGGAAGTGCTCAGTGTGCGCATaGTCAAGTCAGAATCTTCGC +
Preference number: 4 (lower is better)
Translates to: PYLHPGGEQRARRRWGRKCSVCA*SSQNLR
Trigger: GCGAAGATTCTGACTTGAGCATGCGCACACTGAGCA...CTTCCTTCCCCATCTTCTTCGTGCTCTCTGCTCTCCACCAGGGTGGAGGTATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR GCA 90 bp CTGAGCAGAACCCAGTGTGGACTTACCGAGCGCCCATGGAAACTCCTGAACGCATTCTGGACAGCACTGTaGAATGGTATAAAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: LSRTQCGLTERPWKLLNAFWTAL*NGIKPP
Trigger: CGGGGGCTTTATACCATTGCACAGTGCTGTCCAGAA...TGCGTTCAGGAGTTTCCATGGGCGCTCGGTAAGTCCACACTGGGTTCTGCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR GCA 90 bp AAGAACCTCTGTCACAGATCCATACCTCCACCCTGGTGGAGAGCAGAGAGCACGCCTGACACATCCAGATaGTCCAGGTTGGGACAGAGT +
Preference number: 4 (lower is better)
Translates to: KNLCHRSIPPPWWRAESTPDTSR*SRLGQS
Trigger: ACTCTGTCCCAACCTGGAGCATCTGGATGTGTCAGG...CGTGCTCTCTGCTCTCCACCAGGGTGGAGGTATGGATCTGTGACAGAGGTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CAA 72 bp TTGCAGCAGGAAAGGCTTGGGCTGGGGGATAAACACTaGGAGAAGAAGATGGGTGAACCGTCCAGTGATGGG +
Preference number: 4 (lower is better)
Translates to: LQQERLGLGDKH*EKKMGEPSSDG
Trigger: CCCATCACTGGACGGTTCACCCATCTTCTTCTCCAAGTGTTTATCCCCCAGCCCAAGCCTTTCCTGCTGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR TCA 90 bp GTTCTCTCACAAGTGCCACCTGTGTGTGACTTATACAGAGCTCTTCTGCTCAGCCCCGGTGATGGAGGATaGAGATGTGGACGAACCCCT +
Preference number: 4 (lower is better)
Translates to: VLSQVPPVCDLYRALLLSPGDGG*RCGRTP
Trigger: AGGGGTTCGTCCACATCTTCATCCTCCATCACCGGG...GCTGAGCAGAAGAGCTCTGTATAAGTCACACACAGGTGGCACTTGTGAGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR GCA 90 bp CTTGGCTTGCAGCAGGAAAGGCTTGGGCTGGGGGATAAACACTTGGAGAAGAAGCTGTCTATGCTGGCTTaGTCTTTCTGGGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LGLQQERLGLGDKHLEKKLSMLA*SFWGLE
Trigger: CTCCAGACCCCAGAAAGAGCAAGCCAGCATAGACAG...CTTCTTCTCCAAGTGTTTATCCCCCAGCCCAAGCCTTTCCTGCTGCAAGCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CCA 90 bp CACAGATCCATACCTCCACCCTGGTGGAGAGCAGAGAGCACGAAGAAGATGGGGCATTCCTCTGGGCTTTaGTTGGTGTATGATCTGTGC +
Preference number: 4 (lower is better)
Translates to: HRSIPPPWWRAESTKKMGHSSGL*LVYDLC
Trigger: GCACAGATCATACACCAACCAAAGCCCAGAGGAATG...CCCCATCTTCTTCGTGCTCTCTGCTCTCCACCAGGGTGGAGGTATGGATCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CCA 90 bp GTTCTCTCACAAGTGCCACCTGTGTGTGACTTATACAGAGCTCTTCTGCTCAGCTGGGCATATCAAGGCTaGGCTGGGCGTGCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: VLSQVPPVCDLYRALLLSWAYQG*AGRAQC
Trigger: ACACTGAGCACGCCCAGCCCAGCCTTGATATGCCCA...GCTGAGCAGAAGAGCTCTGTATAAGTCACACACAGGTGGCACTTGTGAGAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CAA 72 bp TGCTCAGCAGCATCTCTGAGCAGAGCATCTCTCAGTTaGAAAATGGGCCGAAGGCTAATCCCTCACCTCTGG +
Preference number: 4 (lower is better)
Translates to: CSAASLSRASLS*KMGRRLIPHLW
Trigger: CCAGAGGTGAGGGATTAGCCTTCGGCCCATTTTCAAACTGAGAGATGCTCTGCTCAGAGATGCTGCTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR TCA 90 bp GTAATATTCTGTTCCAAGACTGTGGTGGGTGGATCAGCTTCTGTCTCACCAGTGGCAGATAGAGGTGAGTaGGCTGCGTGCAGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: VIFCSKTVVGGSASVSPVADRGE*AACSEL
Trigger: CAGCTCACTGCACGCAGCTCACTCACCTCTATCTGC...CACTGGTGAGACAGAAGCTGATCCACCCACCACAGTCTTGGAACAGAATATTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CCA 90 bp CTTGGCTTGCAGCAGGAAAGGCTTGGGCTGGGGGATAAACACTTGGAGAAGAAGGACATAGCTGGTTGGTaGGCAGGAAGGAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: LGLQQERLGLGDKHLEKKDIAGW*AGRRRS
Trigger: AGATCTTCTCCTTCCTGCCCACCAACCAGCTATGTC...CTTCTTCTCCAAGTGTTTATCCCCCAGCCCAAGCCTTTCCTGCTGCAAGCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CCA 90 bp GTTCTCTCACAAGTGCCACCTGTGTGTGACTTATACAGAGCTCTTCTGCTCAGCTGCAGTGAGCTGCGATaGTGTGTAAGCCTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: VLSQVPPVCDLYRALLLSCSELR*CVSLRP
Trigger: AGGACGAAGGCTTACACACCATCGCAGCTCACTGCA...GCTGAGCAGAAGAGCTCTGTATAAGTCACACACAGGTGGCACTTGTGAGAGAAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CCA 90 bp CACTTTGGACCCTCTGCTCATTCTGGGAGTATTGAACCAGATCATTTGGCAAGTAGGTACTCCACACCATaGTCCGTGATGCCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: HFGPSAHSGSIEPDHLASRYSTP*SVMPSQ
Trigger: CTGCGAGGGCATCACGGACCATGGTGTGGAGTACCT...ACTTGCCAAATGATCTGGTTCAATACTCCCAGAATGAGCAGAGGGTCCAAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CCA 90 bp AAGAACCTCTGTCACAGATCCATACCTCCACCCTGGTGGAGAGCAGAGAGCACGGTTTTGTACAGTTCTTaGCGAGGTACTCCACACCAT +
Preference number: 4 (lower is better)
Translates to: KNLCHRSIPPPWWRAESTVLYSS*RGTPHH
Trigger: ATGGTGTGGAGTACCTCGCCAAGAACTGTACAAAAC...CGTGCTCTCTGCTCTCCACCAGGGTGGAGGTATGGATCTGTGACAGAGGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CAA 72 bp ACAAATGTAGCAGGCTTGGCTTGCAGCAGGAAAGGCTaGGGCTGGGGGATAAACACTTGGAGAAGAAGATGG +
Preference number: 4 (lower is better)
Translates to: TNVAGLACSRKG*GWGINTWRRRW
Trigger: CCATCTTCTTCTCCAAGTGTTTATCCCCCAGCCCAAGCCTTTCCTGCTGCAAGCCAAGCCTGCTACATTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR GCA 90 bp CTTGGCTTGCAGCAGGAAAGGCTTGGGCTGGGGGATAAACACTTGGAGAAGAAGTGGACATTTAACATCTaGAGGTCGAAGCAGTTGGCA +
Preference number: 4 (lower is better)
Translates to: LGLQQERLGLGDKHLEKKWTFNI*RSKQLA
Trigger: TGCCAACTGCTTCGACCTGCAGATGTTAAATGTCCA...CTTCTTCTCCAAGTGTTTATCCCCCAGCCCAAGCCTTTCCTGCTGCAAGCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CCA 90 bp AGACATATGTGCTGGGCAGGCAGCAAGTTGGAAATGTCCCTTGGGTCTCACATGTGGAGGATGAAGATGTaGACGAACCCCTTCCATTCT +
Preference number: 4 (lower is better)
Translates to: RHMCWAGSKLEMSLGSHMWRMKM*TNPFHS
Trigger: AGAATGGAAGGGGTTCGTCCACATCTTCATCCTCCA...CATGTGAGACCCAAGGGACATTTCCAACTTGCTGCCTGCCCAGCACATATGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CCA 90 bp AGCCTTCTTCAACGCTTAATGTTGCAGCTGCTTCAGGGTTGGAAGAAGAGAGTACAGGCGCCTCAGTTCTaGACAGCACTGTGCAATGGT +
Preference number: 4 (lower is better)
Translates to: SLLQRLMLQLLQGWKKRVQAPQF*TALCNG
Trigger: ACCATTGCACAGTGCTGTCCAGAACTGAGGCGCCTG...TACTCTCTTCTTCCAACCCTGAAGCAGCTGCAACATTAAGCGTTGAAGAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CAA 72 bp CCTTCTTCAACGCTTAATGTTGCAGCTGCTTCAGGGTaGGAAGAAGAGAGTATGGAACGCTGGGGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: PSSTLNVAAASG*EEESMERWGVA
Trigger: AGCTACACCCCAGCGTTCCATACTCTCTTCTTCCAACCCTGAAGCAGCTGCAACATTAAGCGTTGAAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CAA 72 bp ATAAGCTTGGTCTGTAACAAATGTAGCAGGCTTGGCTaGCAGCAGGAAAGGCTTGGGCTGGGGGATAAACAC +
Preference number: 4 (lower is better)
Translates to: ISLVCNKCSRLG*QQERLGLGDKH
Trigger: GTGTTTATCCCCCAGCCCAAGCCTTTCCTGCTGCAAGCCAAGCCTGCTACATTTGTTACAGACCAAGCTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR TCA 90 bp AGCCTTCTTCAACGCTTAATGTTGCAGCTGCTTCAGGGTTGGAAGAAGAGAGTAGGTTGGTATGCTCAATaGCACAGCGCTTGCAATGGC +
Preference number: 4 (lower is better)
Translates to: SLLQRLMLQLLQGWKKRVGWYAQ*HSACNG
Trigger: GCCATTGCAAGCGCTGTGTCATTGAGCATACCAACC...TACTCTCTTCTTCCAACCCTGAAGCAGCTGCAACATTAAGCGTTGAAGAAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR GCA 90 bp AGATGTGCACTGAGAAGGTTTAGGAAAACCTTTAAGGACATGTGTTCCCTTGGGAGGAAGGAGAAGATCTaGACCATGGAGTGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: RCALRRFRKTFKDMCSLGRKEKI*TMEWSG
Trigger: CCCGGACCACTCCATGGTGCAGATCTTCTCCTTCCT...CCCAAGGGAACACATGTCCTTAAAGGTTTTCCTAAACCTTCTCAGTGCACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CCA 90 bp AGCCTTCTTCAACGCTTAATGTTGCAGCTGCTTCAGGGTTGGAAGAAGAGAGTACAGAATCTTCGCTGGTaGCCACATTCCTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SLLQRLMLQLLQGWKKRVQNLRW*PHSSGL
Trigger: AAGCCCAGAGGAATGTGGCCACCAGCGAAGATTCTG...TACTCTCTTCTTCCAACCCTGAAGCAGCTGCAACATTAAGCGTTGAAGAAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CCA 90 bp CATAGCAGATGTGCACTGAGAAGGTTTAGGAAAACCTTTAAGGACATGTGTTCCATATCAAGGCTGGGCTaGGCGTGCTCAGTGTGCGCA +
Preference number: 4 (lower is better)
Translates to: HSRCALRRFRKTFKDMCSISRLG*ACSVCA
Trigger: TGCGCACACTGAGCACGCCCAGCCCAGCCTTGATAT...GGAACACATGTCCTTAAAGGTTTTCCTAAACCTTCTCAGTGCACATCTGCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CCA 90 bp TTACAGTTGTGCTGGTTCTCGGATGAGAGCAAAGGGAGACCTGAGCAGAACCCATCCATTCTGAAATCCTaGCAAAGTCGGTGGGCATAT +
Preference number: 4 (lower is better)
Translates to: LQLCWFSDESKGRPEQNPSILKS*QSRWAY
Trigger: ATATGCCCACCGACTTTGCCAGGATTTCAGAATGGA...TGGGTTCTGCTCAGGTCTCCCTTTGCTCTCATCCGAGAACCAGCACAACTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CCA 90 bp AGATGTGCACTGAGAAGGTTTAGGAAAACCTTTAAGGACATGTGTTCCCTTGGGATCTGCACCATGGAGTaGTCCGGGAGCCTGTCTATG +
Preference number: 4 (lower is better)
Translates to: RCALRRFRKTFKDMCSLGICTME*SGSLSM
Trigger: CATAGACAGGCTCCCGGACCACTCCATGGTGCAGAT...CCCAAGGGAACACATGTCCTTAAAGGTTTTCCTAAACCTTCTCAGTGCACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CCA 90 bp CATAGCAGATGTGCACTGAGAAGGTTTAGGAAAACCTTTAAGGACATGTGTTCCGCACAGCGACATAGCTaGTTGGTGGGCAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: HSRCALRRFRKTFKDMCSAQRHS*LVGRKE
Trigger: CTCCTTCCTGCCCACCAACCAGCTATGTCGCTGTGC...GGAACACATGTCCTTAAAGGTTTTCCTAAACCTTCTCAGTGCACATCTGCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CCA 90 bp CACTTTGGACCCTCTGCTCATTCTGGGAGTATTGAACCAGATCATTTGGCAAGTGACAGCACTGTGCAATaGTATAAAGCCCCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: HFGPSAHSGSIEPDHLASDSTVQ*YKAPGL
Trigger: CAGACCGGGGGCTTTATACCATTGCACAGTGCTGTC...ACTTGCCAAATGATCTGGTTCAATACTCCCAGAATGAGCAGAGGGTCCAAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CCA 90 bp AGATGTGCACTGAGAAGGTTTAGGAAAACCTTTAAGGACATGTGTTCCCTTGGGACACAGCGCTTGCAATaGCGCTTCACAAACCGCAGG +
Preference number: 4 (lower is better)
Translates to: RCALRRFRKTFKDMCSLGTQRLQ*RFTNRR
Trigger: CCTGCGGTTTGTGAAGCGCCATTGCAAGCGCTGTGT...CCCAAGGGAACACATGTCCTTAAAGGTTTTCCTAAACCTTCTCAGTGCACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CAA 72 bp GGAGGAGCTTTAGAGAGCCTTCTTCAACGCTTAATGTaGCAGCTGCTTCAGGGTTGGAAGAAGAGAGTATGG +
Preference number: 4 (lower is better)
Translates to: GGALESLLQRLM*QLLQGWKKRVW
Trigger: CCATACTCTCTTCTTCCAACCCTGAAGCAGCTGCAACATTAAGCGTTGAAGAAGGCTCTCTAAAGCTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CAA 72 bp TCTTACTTGGGTTTGAAAATGCTCAGAGGATGCAAGTaGACAGAGATAGAGGCTTCCTGTGATGAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SYLGLKMLRGCK*TEIEASCDEAP
Trigger: GGGCGCCTCATCACAGGAAGCCTCTATCTCTGTCAACTTGCATCCTCTGAGCATTTTCAAACCCAAGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CAA 72 bp TACAGTGGGAGTGCAGTTGTCGAGCTGTGTATAAGCTaGGTCTGTAACAAATGTAGCAGGCTTGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: YSGSAVVELCIS*VCNKCSRLGLQ
Trigger: CTGCAAGCCAAGCCTGCTACATTTGTTACAGACCAAGCTTATACACAGCTCGACAACTGCACTCCCACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR TCA 90 bp AGATGTGCACTGAGAAGGTTTAGGAAAACCTTTAAGGACATGTGTTCCCTTGGGGATATTGTAACATCCTaGGACTTCCAGGCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: RCALRRFRKTFKDMCSLGDIVTS*DFQAPQ
Trigger: CTGAGGCGCCTGGAAGTCTCAGGATGTTACAATATC...CCCAAGGGAACACATGTCCTTAAAGGTTTTCCTAAACCTTCTCAGTGCACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR GCA 90 bp CAGACTCCTAAGAACCTTACAGAAAGAAAAATAGCTGCTGTGAATGGGTATGGGTGGGCGTGCTCAGTGTaGGCATGCTCAAGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: QTPKNLTERKIAAVNGYGWACSV*ACSSQN
Trigger: ATTCTGACTTGAGCATGCGCACACTGAGCACGCCCA...CCCATACCCATTCACAGCAGCTATTTTTCTTTCTGTAAGGTTCTTAGGAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR GCA 90 bp CATAGCAGATGTGCACTGAGAAGGTTTAGGAAAACCTTTAAGGACATGTGTTCCTGCCTTTGCCCTCACTaGCGTACTGTTTGCCATTGT +
Preference number: 4 (lower is better)
Translates to: HSRCALRRFRKTFKDMCSCLCPH*RTVCHC
Trigger: ACAATGGCAAACAGTACGGCAGTGAGGGCAAAGGCA...GGAACACATGTCCTTAAAGGTTTTCCTAAACCTTCTCAGTGCACATCTGCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR GCA 90 bp AGCCTTCTTCAACGCTTAATGTTGCAGCTGCTTCAGGGTTGGAAGAAGAGAGTAGGATGGAAATCTGTTTaGCATGTAAGGGGGACAGTT +
Preference number: 4 (lower is better)
Translates to: SLLQRLMLQLLQGWKKRVGWKSV*HVRGTV
Trigger: AACTGTCCCCCTTACATGGCAAACAGATTTCCATCC...TACTCTCTTCTTCCAACCCTGAAGCAGCTGCAACATTAAGCGTTGAAGAAGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CCA 90 bp AGACATATGTGCTGGGCAGGCAGCAAGTTGGAAATGTCCCTTGGGTCTCACATGTATCAAGGTATCGGATaGAAATCTGTTTGCCATGTA +
Preference number: 4 (lower is better)
Translates to: RHMCWAGSKLEMSLGSHMYQGIG*KSVCHV
Trigger: TACATGGCAAACAGATTTCCATCCGATACCTTGATA...CATGTGAGACCCAAGGGACATTTCCAACTTGCTGCCTGCCCAGCACATATGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR GCA 90 bp ATAGCTGCTGTGAATGGGTATGGGTGCTTACATGGGACACTTTTACAAAGCACTTTGGTGTATGATCTGTaGTTGAACTCACGTCGGATG +
Preference number: 4 (lower is better)
Translates to: IAAVNGYGCLHGTLLQSTLVYDL*LNSRRM
Trigger: CATCCGACGTGAGTTCAAGCACAGATCATACACCAA...AGTGCTTTGTAAAAGTGTCCCATGTAAGCACCCATACCCATTCACAGCAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CCA 90 bp ATAGCTGCTGTGAATGGGTATGGGTGCTTACATGGGACACTTTTACAAAGCACTGAAACTTCACAGTCCTaGACATTTAACATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: IAAVNGYGCLHGTLLQSTETSQS*TFNICR
Trigger: CCTGCAGATGTTAAATGTCCAGGACTGTGAAGTTTC...AGTGCTTTGTAAAAGTGTCCCATGTAAGCACCCATACCCATTCACAGCAGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CAA 72 bp GTGATAAAATTATTCAAAATGGCTCAGGGATCCACTTaGGACCCTCTGCTCATTCTGGGAGTATTGAACCAG +
Preference number: 4 (lower is better)
Translates to: VIKLFKMAQGST*DPLLILGVLNQ
Trigger: CTGGTTCAATACTCCCAGAATGAGCAGAGGGTCCAAAGTGGATCCCTGAGCCATTTTGAATAATTTTATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
3UTR CAA 72 bp CCTCACTTGTTAATTAAAATTTATAAGGGTTCTTACTaGGGTTTGAAAATGCTCAGAGGATGCAAGTTGACA +
Preference number: 4 (lower is better)
Translates to: PHLLIKIYKGSY*GLKMLRGCKLT
Trigger: TGTCAACTTGCATCCTCTGAGCATTTTCAAACCCAAGTAAGAACCCTTATAAATTTTAATTAACAAGTGAGG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CCA 90 bp TGTACCAGCGGCGGCACACACGTGCACAGCGACATAGCTGGTTGGTaGGCAGGAAGGAGAAGATCTGCACCATGGAGTGGTCCGGGAGCC +
Preference number: 5 (lower is better)
Translates to: CTSGGTHVHSDIAGW*AGRRRSAPWSGPGA
Trigger: GGCTCCCGGACCACTCCATGGTGCAGATCTTCTCCTTCCTGCCCACCAACCAGCTATGTCGCTGTGCACGTGTGTGCCGCCGCTGGTACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CAA 90 bp CACAGATCCATACCTCCACCCTGGTGGAGAGCAGAGAGCACGAAGAAGATGGGGGGGTCCCAGGCCAGGTaGTACCAGCGGCGGCACACA +
Preference number: 5 (lower is better)
Translates to: HRSIPPPWWRAESTKKMGGSQAR*YQRRHT
Trigger: TGTGTGCCGCCGCTGGTACAACCTGGCCTGGGACCC...CCCCATCTTCTTCGTGCTCTCTGCTCTCCACCAGGGTGGAGGTATGGATCTGTG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CCA 90 bp GGTTGTACCAGCGGCGGCACACACGTGCACAGCGACATAGCTGGTTaGTGGGCAGGAAGGAGAAGATCTGCACCATGGAGTGGTCCGGGA +
Preference number: 5 (lower is better)
Translates to: GCTSGGTHVHSDIAG*WAGRRRSAPWSGPG
Trigger: TCCCGGACCACTCCATGGTGCAGATCTTCTCCTTCCTGCCCACCAACCAGCTATGTCGCTGTGCACGTGTGTGCCGCCGCTGGTACAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS GCA 90 bp CGCAGGGCCTCCACGGAAACTTCACAGTCCTGGACATTTAACATCTaGAGGTCGAAGCAGTTGGCAGCCACGATCTGCAGGCCCTGGCCG +
Preference number: 5 (lower is better)
Translates to: RRASTETSQSWTFNI*RSKQLAATICRPWP
Trigger: CGGCCAGGGCCTGCAGATCGTGGCTGCCAACTGCTTCGACCTGCAGATGTTAAATGTCCAGGACTGTGAAGTTTCCGTGGAGGCCCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS GCA 90 bp TCGGTGGGCATATCAAGGCTGGGCTGGGCGTGCTCAGTGTGCGCATaGTCAAGTCAGAATCTTCGCTGGTGGCCACATTCCTCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: SVGISRLGWACSVCA*SSQNLRWWPHSSGL
Trigger: AAGCCCAGAGGAATGTGGCCACCAGCGAAGATTCTGACTTGAGCATGCGCACACTGAGCACGCCCAGCCCAGCCTTGATATGCCCACCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CAA 90 bp CCATACCTCCACCCTGGTGGAGAGCAGAGAGCACGAAGAAGATGGGGAAGGAAGCGTCGGATGAGACGCTaGAGCTGCCTTTGCCCTCAC +
Preference number: 5 (lower is better)
Translates to: PYLHPGGEQRARRRWGRKRRMRR*SCLCPH
Trigger: GTGAGGGCAAAGGCAGCTCAAGCGTCTCATCCGACG...CTTCCTTCCCCATCTTCTTCGTGCTCTCTGCTCTCCACCAGGGTGGAGGTATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS GCA 90 bp GCAAAGTCGGTGGGCATATCAAGGCTGGGCTGGGCGTGCTCAGTGTaGGCATGCTCAAGTCAGAATCTTCGCTGGTGGCCACATTCCTCT +
Preference number: 5 (lower is better)
Translates to: AKSVGISRLGWACSV*ACSSQNLRWWPHSS
Trigger: AGAGGAATGTGGCCACCAGCGAAGATTCTGACTTGAGCATGCGCACACTGAGCACGCCCAGCCCAGCCTTGATATGCCCACCGACTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS GCA 90 bp GAAATCCTGGCAAAGTCGGTGGGCATATCAAGGCTGGGCTGGGCGTaGTCAGTGTGCGCATGCTCAAGTCAGAATCTTCGCTGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: EILAKSVGISRLGWA*SVCACSSQNLRWWP
Trigger: TGGCCACCAGCGAAGATTCTGACTTGAGCATGCGCACACTGAGCACGCCCAGCCCAGCCTTGATATGCCCACCGACTTTGCCAGGATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CCA 90 bp CATAGCTGGTTGGTGGGCAGGAAGGAGAAGATCTGCACCATGGAGTaGTCCGGGAGCCTGTCTATGCTGGCTTGCTCTTTCTGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: HSWLVGRKEKICTME*SGSLSMLACSFWGL
Trigger: CAGACCCCAGAAAGAGCAAGCCAGCATAGACAGGCTCCCGGACCACTCCATGGTGCAGATCTTCTCCTTCCTGCCCACCAACCAGCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CCA 90 bp AGCGACATAGCTGGTTGGTGGGCAGGAAGGAGAAGATCTGCACCATaGAGTGGTCCGGGAGCCTGTCTATGCTGGCTTGCTCTTTCTGGG +
Preference number: 5 (lower is better)
Translates to: SDIAGWWAGRRRSAP*SGPGACLCWLALSG
Trigger: CCCAGAAAGAGCAAGCCAGCATAGACAGGCTCCCGGACCACTCCATGGTGCAGATCTTCTCCTTCCTGCCCACCAACCAGCTATGTCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CAA 90 bp GGTGGATCAGCTTCTGTCTCACCAGTGTGTCGCCTCTTCTCTGTGCCTGGCATCCAGCGACATAGCTGGTaGGTGGGCAGGAAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: GGSASVSPVCRLFSVPGIQRHSW*VGRKEK
Trigger: CTTCTCCTTCCTGCCCACCAACCAGCTATGTCGCTG...GATGCCAGGCACAGAGAAGAGGCGACACACTGGTGAGACAGAAGCTGATCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CAA 90 bp GAACCACGGCACCTGTCCCCGATGGCTGCAGGACAGATGTGCCTAAAGCATAGCAGGGCACGGTCCACATaGATGGTCTCTCCAGTGAGA +
Preference number: 5 (lower is better)
Translates to: EPRHLSPMAAGQMCLKHSRARST*MVSPVR
Trigger: TCTCACTGGAGAGACCATCAATGTGGACCGTGCCCT...GCTATGCTTTAGGCACATCTGTCCTGCAGCCATCGGGGACAGGTGCCGTGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS TCA 90 bp TCCCCGGTGATGGAGGATGAAGATGTGGACGAACCCCTTCCATTCTaGAATCCTGGCAAAGTCGGTGGGCATATCAAGGCTGGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SPVMEDEDVDEPLPF*NPGKVGGHIKAGLG
Trigger: GCCCAGCCCAGCCTTGATATGCCCACCGACTTTGCCAGGATTTCAGAATGGAAGGGGTTCGTCCACATCTTCATCCTCCATCACCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS GCA 90 bp TGGACATTTAACATCTGCAGGTCGAAGCAGTTGGCAGCCACGATCTaGAGGCCCTGGCCGGTGATGCTCTCACAGGACTTGAGGCTTAGC +
Preference number: 5 (lower is better)
Translates to: WTFNICRSKQLAATI*RPWPVMLSQDLRLS
Trigger: GCTAAGCCTCAAGTCCTGTGAGAGCATCACCGGCCAGGGCCTGCAGATCGTGGCTGCCAACTGCTTCGACCTGCAGATGTTAAATGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CCA 90 bp GGCTGGGCGTGCTCAGTGTGCGCATGCTCAAGTCAGAATCTTCGCTaGTGGCCACATTCCTCTGGGCTTTGGTTGGTGTATGATCTGTGC +
Preference number: 5 (lower is better)
Translates to: GWACSVCACSSQNLR*WPHSSGLWLVYDLC
Trigger: GCACAGATCATACACCAACCAAAGCCCAGAGGAATGTGGCCACCAGCGAAGATTCTGACTTGAGCATGCGCACACTGAGCACGCCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CCA 90 bp AGATGTGGACGAACCCCTTCCATTCTGAAATCCTGGCAAAGTCGGTaGGCATATCAAGGCTGGGCTGGGCGTGCTCAGTGTGCGCATGCT +
Preference number: 5 (lower is better)
Translates to: RCGRTPSILKSWQSR*AYQGWAGRAQCAHA
Trigger: AGCATGCGCACACTGAGCACGCCCAGCCCAGCCTTGATATGCCCACCGACTTTGCCAGGATTTCAGAATGGAAGGGGTTCGTCCACATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CAA 90 bp GGTGGATCAGCTTCTGTCTCACCAGTGTGTCGCCTCTTCTCTGTGCCTGGCATCCTGATGCAGGTCACTTaGGAGCACCCTGACACATCC +
Preference number: 5 (lower is better)
Translates to: GGSASVSPVCRLFSVPGILMQVT*EHPDTS
Trigger: GGATGTGTCAGGGTGCTCCAAAGTGACCTGCATCAG...GATGCCAGGCACAGAGAAGAGGCGACACACTGGTGAGACAGAAGCTGATCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS GCA 90 bp CGCTGGTGGCCACATTCCTCTGGGCTTTGGTTGGTGTATGATCTGTaGTTGAACTCACGTCGGATGAGACGCTTGAGCTGCCTTTGCCCT +
Preference number: 5 (lower is better)
Translates to: RWWPHSSGLWLVYDL*LNSRRMRRLSCLCP
Trigger: AGGGCAAAGGCAGCTCAAGCGTCTCATCCGACGTGAGTTCAAGCACAGATCATACACCAACCAAAGCCCAGAGGAATGTGGCCACCAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CCA 90 bp CATTCTGAAATCCTGGCAAAGTCGGTGGGCATATCAAGGCTGGGCTaGGCGTGCTCAGTGTGCGCATGCTCAAGTCAGAATCTTCGCTGG +
Preference number: 5 (lower is better)
Translates to: HSEILAKSVGISRLG*ACSVCACSSQNLRW
Trigger: CCAGCGAAGATTCTGACTTGAGCATGCGCACACTGAGCACGCCCAGCCCAGCCTTGATATGCCCACCGACTTTGCCAGGATTTCAGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CCA 90 bp CTGACAATGACAGTCTCCAGCATGAGACACACATTGGGGGTGTCCTaGCAAAGCCTGCGGGTCAGTACTTTCAGGGCACGGTCCACATTG +
Preference number: 5 (lower is better)
Translates to: LTMTVSSMRHTLGVS*QSLRVSTFRARSTL
Trigger: CAATGTGGACCGTGCCCTGAAAGTACTGACCCGCAGGCTTTGCCAGGACACCCCCAATGTGTGTCTCATGCTGGAGACTGTCATTGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CCA 90 bp TGGCGCTTCACAAACCGCAGGGCCTCCACGGAAACTTCACAGTCCTaGACATTTAACATCTGCAGGTCGAAGCAGTTGGCAGCCACGATC +
Preference number: 5 (lower is better)
Translates to: WRFTNRRASTETSQS*TFNICRSKQLAATI
Trigger: GATCGTGGCTGCCAACTGCTTCGACCTGCAGATGTTAAATGTCCAGGACTGTGAAGTTTCCGTGGAGGCCCTGCGGTTTGTGAAGCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CCA 90 bp CAGAAGAAAGCGGGGTTGGTATGCTCAATGACACAGCGCTTGCAATaGCGCTTCACAAACCGCAGGGCCTCCACGGAAACTTCACAGTCC +
Preference number: 5 (lower is better)
Translates to: QKKAGLVCSMTQRLQ*RFTNRRASTETSQS
Trigger: GGACTGTGAAGTTTCCGTGGAGGCCCTGCGGTTTGTGAAGCGCCATTGCAAGCGCTGTGTCATTGAGCATACCAACCCCGCTTTCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CCA 90 bp CCTTCCATTCTGAAATCCTGGCAAAGTCGGTGGGCATATCAAGGCTaGGCTGGGCGTGCTCAGTGTGCGCATGCTCAAGTCAGAATCTTC +
Preference number: 5 (lower is better)
Translates to: PSILKSWQSRWAYQG*AGRAQCAHAQVRIF
Trigger: GAAGATTCTGACTTGAGCATGCGCACACTGAGCACGCCCAGCCCAGCCTTGATATGCCCACCGACTTTGCCAGGATTTCAGAATGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS TCA 90 bp GAATCTTCGCTGGTGGCCACATTCCTCTGGGCTTTGGTTGGTGTATaGTCTGTGCTTGAACTCACGTCGGATGAGACGCTTGAGCTGCCT +
Preference number: 5 (lower is better)
Translates to: ESSLVATFLWALVGV*SVLELTSDETLELP
Trigger: AGGCAGCTCAAGCGTCTCATCCGACGTGAGTTCAAGCACAGATCATACACCAACCAAAGCCCAGAGGAATGTGGCCACCAGCGAAGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CAA 90 bp CCATACCTCCACCCTGGTGGAGAGCAGAGAGCACGAAGAAGATGGGGAAGGAAGAGTTTTGTACAGTTCTaGGCGAGGTACTCCACACCA +
Preference number: 5 (lower is better)
Translates to: PYLHPGGEQRARRRWGRKSFVQF*ARYSTP
Trigger: TGGTGTGGAGTACCTCGCCAAGAACTGTACAAAACT...CTTCCTTCCCCATCTTCTTCGTGCTCTCTGCTCTCCACCAGGGTGGAGGTATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CCA 90 bp TGCTCAAGTCAGAATCTTCGCTGGTGGCCACATTCCTCTGGGCTTTaGTTGGTGTATGATCTGTGCTTGAACTCACGTCGGATGAGACGC +
Preference number: 5 (lower is better)
Translates to: CSSQNLRWWPHSSGL*LVYDLCLNSRRMRR
Trigger: GCGTCTCATCCGACGTGAGTTCAAGCACAGATCATACACCAACCAAAGCCCAGAGGAATGTGGCCACCAGCGAAGATTCTGACTTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CAA 90 bp GTTCTCTCACAAGTGCCACCTGTGTGTGACTTATACAGAGCTCTTCTGCTCAGCTCCAGATGCTCCAGGTaGGGACAGAGTGACACCACA +
Preference number: 5 (lower is better)
Translates to: VLSQVPPVCDLYRALLLSSRCSR*GQSDTT
Trigger: TGTGGTGTCACTCTGTCCCAACCTGGAGCATCTGGA...GCTGAGCAGAAGAGCTCTGTATAAGTCACACACAGGTGGCACTTGTGAGAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CAA 90 bp CTTGGCTTGCAGCAGGAAAGGCTTGGGCTGGGGGATAAACACTTGGAGAAGAAGCTTAGCCTCTTGAGATaGAAGCAGTTCAAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: LGLQQERLGLGDKHLEKKLSLLR*KQFKAR
Trigger: CCTGGCTTTGAACTGCTTCAATCTCAAGAGGCTAAG...CTTCTTCTCCAAGTGTTTATCCCCCAGCCCAAGCCTTTCCTGCTGCAAGCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CAA 90 bp AGACATATGTGCTGGGCAGGCAGCAAGTTGGAAATGTCCCTTGGGTCTCACATGATGCTCTCACAGGACTaGAGGCTTAGCCTCTTGAGA +
Preference number: 5 (lower is better)
Translates to: RHMCWAGSKLEMSLGSHMMLSQD*RLSLLR
Trigger: TCTCAAGAGGCTAAGCCTCAAGTCCTGTGAGAGCAT...CATGTGAGACCCAAGGGACATTTCCAACTTGCTGCCTGCCCAGCACATATGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CAA 90 bp ATAGCTGCTGTGAATGGGTATGGGTGCTTACATGGGACACTTTTACAAAGCACTTGCAGGTCGAAGCAGTaGGCAGCCACGATCTGCAGG +
Preference number: 5 (lower is better)
Translates to: IAAVNGYGCLHGTLLQSTCRSKQ*AATICR
Trigger: CCTGCAGATCGTGGCTGCCAACTGCTTCGACCTGCA...AGTGCTTTGTAAAAGTGTCCCATGTAAGCACCCATACCCATTCACAGCAGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CAA 90 bp CACTTTGGACCCTCTGCTCATTCTGGGAGTATTGAACCAGATCATTTGGCAAGTAGCATGAGACACACATaGGGGGTGTCCTGGCAAAGC +
Preference number: 5 (lower is better)
Translates to: HFGPSAHSGSIEPDHLASSMRHT*GVSWQS
Trigger: GCTTTGCCAGGACACCCCCAATGTGTGTCTCATGCT...ACTTGCCAAATGATCTGGTTCAATACTCCCAGAATGAGCAGAGGGTCCAAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CAA 90 bp GTTCTCTCACAAGTGCCACCTGTGTGTGACTTATACAGAGCTCTTCTGCTCAGCCAGAAGAAAGCGGGGTaGGTATGCTCAATGACACAG +
Preference number: 5 (lower is better)
Translates to: VLSQVPPVCDLYRALLLSQKKAG*VCSMTQ
Trigger: CTGTGTCATTGAGCATACCAACCCCGCTTTCTTCTG...GCTGAGCAGAAGAGCTCTGTATAAGTCACACACAGGTGGCACTTGTGAGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CAA 90 bp AGATGTGCACTGAGAAGGTTTAGGAAAACCTTTAAGGACATGTGTTCCCTTGGGCCTGTCTATGCTGGCTaGCTCTTTCTGGGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: RCALRRFRKTFKDMCSLGPVYAG*LFLGSG
Trigger: TCCAGACCCCAGAAAGAGCAAGCCAGCATAGACAGG...CCCAAGGGAACACATGTCCTTAAAGGTTTTCCTAAACCTTCTCAGTGCACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CAA 90 bp CACTTTGGACCCTCTGCTCATTCTGGGAGTATTGAACCAGATCATTTGGCAAGTGTGTATGATCTGTGCTaGAACTCACGTCGGATGAGA +
Preference number: 5 (lower is better)
Translates to: HFGPSAHSGSIEPDHLASVYDLC*NSRRMR
Trigger: TCTCATCCGACGTGAGTTCAAGCACAGATCATACAC...ACTTGCCAAATGATCTGGTTCAATACTCCCAGAATGAGCAGAGGGTCCAAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CAA 90 bp AACAAAACCGAAACTAGCAAATTGGTTTCTATTCAGAACGGACCACTTAAGAGCCGGATGGAAATCTGTTaGCCATGTAAGGGGGACAGT +
Preference number: 5 (lower is better)
Translates to: NKTETSKLVSIQNGPLKSRMEIC*PCKGDS
Trigger: ACTGTCCCCCTTACATGGCAAACAGATTTCCATCCG...GCTCTTAAGTGGTCCGTTCTGAATAGAAACCAATTTGCTAGTTTCGGTTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS-3UTR CAA 90 bp CAGACTCCTAAGAACCTTACAGAAAGAAAAATAGCTGCTGTGAATGGGTATGGGTTGAGGCTTAGCCTCTaGAGATTGAAGCAGTTCAAA +
Preference number: 5 (lower is better)
Translates to: QTPKNLTERKIAAVNGYGLRLSL*RLKQFK
Trigger: TTTGAACTGCTTCAATCTCAAGAGGCTAAGCCTCAA...CCCATACCCATTCACAGCAGCTATTTTTCTTTCTGTAAGGTTCTTAGGAGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CAA 90 bp AGGTTGTACCAGCGGCGGCACACACGTGCACAGCGACATAGCTGGTaGGTGGGCAGGAAGGAGAAGATCTGCACCATGGAGTGGTCCGGG +
Preference number: 6 (lower is better)
Translates to: RLYQRRHTRAQRHSW*VGRKEKICTMEWSG
Trigger: CCCGGACCACTCCATGGTGCAGATCTTCTCCTTCCTGCCCACCAACCAGCTATGTCGCTGTGCACGTGTGTGCCGCCGCTGGTACAACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS GCA 72 bp AGATCTGCACCATGGAGTGGTCCGGGAGCCTGTCTATaGTGGCTTGCTCTTTCTGGGGTCTGGAGGCGAGCC +
Preference number: 6 (lower is better)
Translates to: RSAPWSGPGACL*WLALSGVWRRA
Trigger: GGCTCGCCTCCAGACCCCAGAAAGAGCAAGCCAGCATAGACAGGCTCCCGGACCACTCCATGGTGCAGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CAA 72 bp CACCATGGAGTGGTCCGGGAGCCTGTCTATGCTGGCTaGCTCTTTCTGGGGTCTGGAGGCGAGCCGAATGAG +
Preference number: 6 (lower is better)
Translates to: HHGVVREPVYAG*LFLGSGGEPNE
Trigger: CTCATTCGGCTCGCCTCCAGACCCCAGAAAGAGCAAGCCAGCATAGACAGGCTCCCGGACCACTCCATGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CAA 72 bp CAGCGGCGGCACACACGTGCACAGCGACATAGCTGGTaGGTGGGCAGGAAGGAGAAGATCTGCACCATGGAG +
Preference number: 6 (lower is better)
Translates to: QRRHTRAQRHSW*VGRKEKICTME
Trigger: CTCCATGGTGCAGATCTTCTCCTTCCTGCCCACCAACCAGCTATGTCGCTGTGCACGTGTGTGCCGCCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CAA 90 bp TCCTGGCAAAGCCTGCGGGTCAGTACTTTCAGGGCACGGTCCACATaGATGGTCTCTCCAGTGAGACGGATAGTCCTCCAGAGGCGCGGG +
Preference number: 6 (lower is better)
Translates to: SWQSLRVSTFRARST*MVSPVRRIVLQRRG
Trigger: CCCGCGCCTCTGGAGGACTATCCGTCTCACTGGAGAGACCATCAATGTGGACCGTGCCCTGAAAGTACTGACCCGCAGGCTTTGCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS GCA 72 bp ACCATGGAGTGGTCCGGGAGCCTGTCTATGCTGGCTTaGTCTTTCTGGGGTCTGGAGGCGAGCCGAATGAGT +
Preference number: 6 (lower is better)
Translates to: TMEWSGSLSMLA*SFWGLEASRMS
Trigger: ACTCATTCGGCTCGCCTCCAGACCCCAGAAAGAGCAAGCCAGCATAGACAGGCTCCCGGACCACTCCATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS GCA 72 bp AACATCTGCAGGTCGAAGCAGTTGGCAGCCACGATCTaGAGGCCCTGGCCGGTGATGCTCTCACAGGACTTG +
Preference number: 6 (lower is better)
Translates to: NICRSKQLAATI*RPWPVMLSQDL
Trigger: CAAGTCCTGTGAGAGCATCACCGGCCAGGGCCTGCAGATCGTGGCTGCCAACTGCTTCGACCTGCAGATGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CCA 72 bp GCTGGTTGGTGGGCAGGAAGGAGAAGATCTGCACCATaGAGTGGTCCGGGAGCCTGTCTATGCTGGCTTGCT +
Preference number: 6 (lower is better)
Translates to: AGWWAGRRRSAP*SGPGACLCWLA
Trigger: AGCAAGCCAGCATAGACAGGCTCCCGGACCACTCCATGGTGCAGATCTTCTCCTTCCTGCCCACCAACCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CCA 72 bp GGCGGCACACACGTGCACAGCGACATAGCTGGTTGGTaGGCAGGAAGGAGAAGATCTGCACCATGGAGTGGT +
Preference number: 6 (lower is better)
Translates to: GGTHVHSDIAGW*AGRRRSAPWSG
Trigger: ACCACTCCATGGTGCAGATCTTCTCCTTCCTGCCCACCAACCAGCTATGTCGCTGTGCACGTGTGTGCCGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CCA 72 bp AGCGGCGGCACACACGTGCACAGCGACATAGCTGGTTaGTGGGCAGGAAGGAGAAGATCTGCACCATGGAGT +
Preference number: 6 (lower is better)
Translates to: SGGTHVHSDIAG*WAGRRRSAPWS
Trigger: ACTCCATGGTGCAGATCTTCTCCTTCCTGCCCACCAACCAGCTATGTCGCTGTGCACGTGTGTGCCGCCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CAA 90 bp GAAGATCTGCACCATGGAGTGGTCCGGGAGCCTGTCTATGCTGGCTaGCTCTTTCTGGGGTCTGGAGGCGAGCCGAATGAGTGGGTGAGT +
Preference number: 6 (lower is better)
Translates to: EDLHHGVVREPVYAG*LFLGSGGEPNEWVS
Trigger: ACTCACCCACTCATTCGGCTCGCCTCCAGACCCCAGAAAGAGCAAGCCAGCATAGACAGGCTCCCGGACCACTCCATGGTGCAGATCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CAA 90 bp CGCCGGCAGCCACTGACAATGACAGTCTCCAGCATGAGACACACATaGGGGGTGTCCTGGCAAAGCCTGCGGGTCAGTACTTTCAGGGCA +
Preference number: 6 (lower is better)
Translates to: RRQPLTMTVSSMRHT*GVSWQSLRVSTFRA
Trigger: TGCCCTGAAAGTACTGACCCGCAGGCTTTGCCAGGACACCCCCAATGTGTGTCTCATGCTGGAGACTGTCATTGTCAGTGGCTGCCGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CAA 90 bp AGGCCCTGGCCGGTGATGCTCTCACAGGACTTGAGGCTTAGCCTCTaGAGATTGAAGCAGTTCAAAGCCAGGGATTCCAGGCCCGTGTCG +
Preference number: 6 (lower is better)
Translates to: RPWPVMLSQDLRLSL*RLKQFKARDSRPVS
Trigger: CGACACGGGCCTGGAATCCCTGGCTTTGAACTGCTTCAATCTCAAGAGGCTAAGCCTCAAGTCCTGTGAGAGCATCACCGGCCAGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS GCA 72 bp GCAAAGTCGGTGGGCATATCAAGGCTGGGCTGGGCGTaGTCAGTGTGCGCATGCTCAAGTCAGAATCTTCGC +
Preference number: 6 (lower is better)
Translates to: AKSVGISRLGWA*SVCACSSQNLR
Trigger: GCGAAGATTCTGACTTGAGCATGCGCACACTGAGCACGCCCAGCCCAGCCTTGATATGCCCACCGACTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CCA 72 bp CTGAAATCCTGGCAAAGTCGGTGGGCATATCAAGGCTaGGCTGGGCGTGCTCAGTGTGCGCATGCTCAAGTC +
Preference number: 6 (lower is better)
Translates to: LKSWQSRWAYQG*AGRAQCAHAQV
Trigger: GACTTGAGCATGCGCACACTGAGCACGCCCAGCCCAGCCTTGATATGCCCACCGACTTTGCCAGGATTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CCA 72 bp ACAGTCTCCAGCATGAGACACACATTGGGGGTGTCCTaGCAAAGCCTGCGGGTCAGTACTTTCAGGGCACGG +
Preference number: 6 (lower is better)
Translates to: TVSSMRHTLGVS*QSLRVSTFRAR
Trigger: CCGTGCCCTGAAAGTACTGACCCGCAGGCTTTGCCAGGACACCCCCAATGTGTGTCTCATGCTGGAGACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CCA 72 bp GCGGGGTTGGTATGCTCAATGACACAGCGCTTGCAATaGCGCTTCACAAACCGCAGGGCCTCCACGGAAACT +
Preference number: 6 (lower is better)
Translates to: AGLVCSMTQRLQ*RFTNRRASTET
Trigger: AGTTTCCGTGGAGGCCCTGCGGTTTGTGAAGCGCCATTGCAAGCGCTGTGTCATTGAGCATACCAACCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CAA 72 bp ATGGAGGCCTCCCGGGTCAAGCTGATGCAGGTCACTTaGGAGCACCCTGACACATCCAGATGCTCCAGGTTG +
Preference number: 6 (lower is better)
Translates to: MEASRVKLMQVT*EHPDTSRCSRL
Trigger: CAACCTGGAGCATCTGGATGTGTCAGGGTGCTCCAAAGTGACCTGCATCAGCTTGACCCGGGAGGCCTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CAA 90 bp TGGCCGGTGATGCTCTCACAGGACTTGAGGCTTAGCCTCTTGAGATaGAAGCAGTTCAAAGCCAGGGATTCCAGGCCCGTGTCGGAGACC +
Preference number: 6 (lower is better)
Translates to: WPVMLSQDLRLSLLR*KQFKARDSRPVSET
Trigger: GGTCTCCGACACGGGCCTGGAATCCCTGGCTTTGAACTGCTTCAATCTCAAGAGGCTAAGCCTCAAGTCCTGTGAGAGCATCACCGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CAA 90 bp GCAGCCACGATCTGCAGGCCCTGGCCGGTGATGCTCTCACAGGACTaGAGGCTTAGCCTCTTGAGATTGAAGCAGTTCAAAGCCAGGGAT +
Preference number: 6 (lower is better)
Translates to: AATICRPWPVMLSQD*RLSLLRLKQFKARD
Trigger: ATCCCTGGCTTTGAACTGCTTCAATCTCAAGAGGCTAAGCCTCAAGTCCTGTGAGAGCATCACCGGCCAGGGCCTGCAGATCGTGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS GCA 72 bp ATATCAAGGCTGGGCTGGGCGTGCTCAGTGTGCGCATaGTCAAGTCAGAATCTTCGCTGGTGGCCACATTCC +
Preference number: 6 (lower is better)
Translates to: ISRLGWACSVCA*SSQNLRWWPHS
Trigger: GGAATGTGGCCACCAGCGAAGATTCTGACTTGAGCATGCGCACACTGAGCACGCCCAGCCCAGCCTTGATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CCA 72 bp ATCCTGGCAAAGTCGGTGGGCATATCAAGGCTGGGCTaGGCGTGCTCAGTGTGCGCATGCTCAAGTCAGAAT +
Preference number: 6 (lower is better)
Translates to: ILAKSVGISRLG*ACSVCACSSQN
Trigger: ATTCTGACTTGAGCATGCGCACACTGAGCACGCCCAGCCCAGCCTTGATATGCCCACCGACTTTGCCAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CCA 72 bp CGAACCCCTTCCATTCTGAAATCCTGGCAAAGTCGGTaGGCATATCAAGGCTGGGCTGGGCGTGCTCAGTGT +
Preference number: 6 (lower is better)
Translates to: RTPSILKSWQSR*AYQGWAGRAQC
Trigger: ACACTGAGCACGCCCAGCCCAGCCTTGATATGCCCACCGACTTTGCCAGGATTTCAGAATGGAAGGGGTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CCA 72 bp TTGGTGGGCAGGAAGGAGAAGATCTGCACCATGGAGTaGTCCGGGAGCCTGTCTATGCTGGCTTGCTCTTTC +
Preference number: 6 (lower is better)
Translates to: LVGRKEKICTME*SGSLSMLACSF
Trigger: GAAAGAGCAAGCCAGCATAGACAGGCTCCCGGACCACTCCATGGTGCAGATCTTCTCCTTCCTGCCCACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CCA 72 bp AGTTTTGTACAGTTCTTGGCGAGGTACTCCACACCATaGTCCGTGATGCCCTCGCAGCCCCTCGCATTGAGG +
Preference number: 6 (lower is better)
Translates to: SFVQFLARYSTP*SVMPSQPLALR
Trigger: CCTCAATGCGAGGGGCTGCGAGGGCATCACGGACCATGGTGTGGAGTACCTCGCCAAGAACTGTACAAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CAA 72 bp AGCCTGCGGGTCAGTACTTTCAGGGCACGGTCCACATaGATGGTCTCTCCAGTGAGACGGATAGTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: SLRVSTFRARST*MVSPVRRIVLQ
Trigger: CTGGAGGACTATCCGTCTCACTGGAGAGACCATCAATGTGGACCGTGCCCTGAAAGTACTGACCCGCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CAA 72 bp AAGAAAGCGGGGTTGGTATGCTCAATGACACAGCGCTaGCAATGGCGCTTCACAAACCGCAGGGCCTCCACG +
Preference number: 6 (lower is better)
Translates to: KKAGLVCSMTQR*QWRFTNRRAST
Trigger: CGTGGAGGCCCTGCGGTTTGTGAAGCGCCATTGCAAGCGCTGTGTCATTGAGCATACCAACCCCGCTTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CAA 90 bp GAAACTTCACAGTCCTGGACATTTAACATCTGCAGGTCGAAGCAGTaGGCAGCCACGATCTGCAGGCCCTGGCCGGTGATGCTCTCACAG +
Preference number: 6 (lower is better)
Translates to: ETSQSWTFNICRSKQ*AATICRPWPVMLSQ
Trigger: CTGTGAGAGCATCACCGGCCAGGGCCTGCAGATCGTGGCTGCCAACTGCTTCGACCTGCAGATGTTAAATGTCCAGGACTGTGAAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CAA 72 bp CCACTGACAATGACAGTCTCCAGCATGAGACACACATaGGGGGTGTCCTGGCAAAGCCTGCGGGTCAGTACT +
Preference number: 6 (lower is better)
Translates to: PLTMTVSSMRHT*GVSWQSLRVST
Trigger: AGTACTGACCCGCAGGCTTTGCCAGGACACCCCCAATGTGTGTCTCATGCTGGAGACTGTCATTGTCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CAA 90 bp TGGTGGCCACATTCCTCTGGGCTTTGGTTGGTGTATGATCTGTGCTaGAACTCACGTCGGATGAGACGCTTGAGCTGCCTTTGCCCTCAC +
Preference number: 6 (lower is better)
Translates to: WWPHSSGLWLVYDLC*NSRRMRRLSCLCPH
Trigger: GTGAGGGCAAAGGCAGCTCAAGCGTCTCATCCGACGTGAGTTCAAGCACAGATCATACACCAACCAAAGCCCAGAGGAATGTGGCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CAA 72 bp ACTTTGGAGCACCCTGACACATCCAGATGCTCCAGGTaGGGACAGAGTGACACCACATCAAAGACAGCCTCG +
Preference number: 6 (lower is better)
Translates to: TLEHPDTSRCSR*GQSDTTSKTAS
Trigger: CGAGGCTGTCTTTGATGTGGTGTCACTCTGTCCCAACCTGGAGCATCTGGATGTGTCAGGGTGCTCCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CAA 90 bp AGGGGACATTTACCAATGTCCAGCGACTTAAGTTTTGTACAGTTCTaGGCGAGGTACTCCACACCATGGTCCGTGATGCCCTCGCAGCCC +
Preference number: 6 (lower is better)
Translates to: RGHLPMSSDLSFVQF*ARYSTPWSVMPSQP
Trigger: GGGCTGCGAGGGCATCACGGACCATGGTGTGGAGTACCTCGCCAAGAACTGTACAAAACTTAAGTCGCTGGACATTGGTAAATGTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS TCA 72 bp CTGGTGGCCACATTCCTCTGGGCTTTGGTTGGTGTATaGTCTGTGCTTGAACTCACGTCGGATGAGACGCTT +
Preference number: 6 (lower is better)
Translates to: LVATFLWALVGV*SVLELTSDETL
Trigger: AAGCGTCTCATCCGACGTGAGTTCAAGCACAGATCATACACCAACCAAAGCCCAGAGGAATGTGGCCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS GCA 72 bp CCACATTCCTCTGGGCTTTGGTTGGTGTATGATCTGTaGTTGAACTCACGTCGGATGAGACGCTTGAGCTGC +
Preference number: 6 (lower is better)
Translates to: PHSSGLWLVYDL*LNSRRMRRLSC
Trigger: GCAGCTCAAGCGTCTCATCCGACGTGAGTTCAAGCACAGATCATACACCAACCAAAGCCCAGAGGAATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS GCA 72 bp TCCACGGAAACTTCACAGTCCTGGACATTTAACATCTaGAGGTCGAAGCAGTTGGCAGCCACGATCTGCAGG +
Preference number: 6 (lower is better)
Translates to: STETSQSWTFNI*RSKQLAATICR
Trigger: CCTGCAGATCGTGGCTGCCAACTGCTTCGACCTGCAGATGTTAAATGTCCAGGACTGTGAAGTTTCCGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CCA 72 bp CAGAATCTTCGCTGGTGGCCACATTCCTCTGGGCTTTaGTTGGTGTATGATCTGTGCTTGAACTCACGTCGG +
Preference number: 6 (lower is better)
Translates to: QNLRWWPHSSGL*LVYDLCLNSRR
Trigger: CCGACGTGAGTTCAAGCACAGATCATACACCAACCAAAGCCCAGAGGAATGTGGCCACCAGCGAAGATTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CCA 72 bp TGCTCAGTGTGCGCATGCTCAAGTCAGAATCTTCGCTaGTGGCCACATTCCTCTGGGCTTTGGTTGGTGTAT +
Preference number: 6 (lower is better)
Translates to: CSVCACSSQNLR*WPHSSGLWLVY
Trigger: ATACACCAACCAAAGCCCAGAGGAATGTGGCCACCAGCGAAGATTCTGACTTGAGCATGCGCACACTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CCA 72 bp ACAAACCGCAGGGCCTCCACGGAAACTTCACAGTCCTaGACATTTAACATCTGCAGGTCGAAGCAGTTGGCA +
Preference number: 6 (lower is better)
Translates to: TNRRASTETSQS*TFNICRSKQLA
Trigger: TGCCAACTGCTTCGACCTGCAGATGTTAAATGTCCAGGACTGTGAAGTTTCCGTGGAGGCCCTGCGGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CAA 72 bp ATGCTCTCACAGGACTTGAGGCTTAGCCTCTTGAGATaGAAGCAGTTCAAAGCCAGGGATTCCAGGCCCGTG +
Preference number: 6 (lower is better)
Translates to: MLSQDLRLSLLR*KQFKARDSRPV
Trigger: CACGGGCCTGGAATCCCTGGCTTTGAACTGCTTCAATCTCAAGAGGCTAAGCCTCAAGTCCTGTGAGAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CAA 72 bp CCGGTGATGCTCTCACAGGACTTGAGGCTTAGCCTCTaGAGATTGAAGCAGTTCAAAGCCAGGGATTCCAGG +
Preference number: 6 (lower is better)
Translates to: PVMLSQDLRLSL*RLKQFKARDSR
Trigger: CCTGGAATCCCTGGCTTTGAACTGCTTCAATCTCAAGAGGCTAAGCCTCAAGTCCTGTGAGAGCATCACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CAA 90 bp TCAAGTCAGAATCTTCGCTGGTGGCCACATTCCTCTGGGCTTTGGTaGGTGTATGATCTGTGCTTGAACTCACGTCGGATGAGACGCTTG +
Preference number: 6 (lower is better)
Translates to: SSQNLRWWPHSSGLW*VYDLCLNSRRMRRL
Trigger: CAAGCGTCTCATCCGACGTGAGTTCAAGCACAGATCATACACCAACCAAAGCCCAGAGGAATGTGGCCACCAGCGAAGATTCTGACTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CAA 90 bp AGCACGAAGCAGTCCGTCATATCAAGGTATCGGATGGAAATCTGTTaGCCATGTAAGGGGGACAGTTTAATGGAGGCCTCCCGGGTCAAG +
Preference number: 6 (lower is better)
Translates to: STKQSVISRYRMEIC*PCKGDSLMEASRVK
Trigger: CTTGACCCGGGAGGCCTCCATTAAACTGTCCCCCTTACATGGCAAACAGATTTCCATCCGATACCTTGATATGACGGACTGCTTCGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CAA 72 bp CATTCCTCTGGGCTTTGGTTGGTGTATGATCTGTGCTaGAACTCACGTCGGATGAGACGCTTGAGCTGCCTT +
Preference number: 6 (lower is better)
Translates to: HSSGLWLVYDLC*NSRRMRRLSCL
Trigger: AAGGCAGCTCAAGCGTCTCATCCGACGTGAGTTCAAGCACAGATCATACACCAACCAAAGCCCAGAGGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CAA 72 bp AATCTTCGCTGGTGGCCACATTCCTCTGGGCTTTGGTaGGTGTATGATCTGTGCTTGAACTCACGTCGGATG +
Preference number: 6 (lower is better)
Translates to: NLRWWPHSSGLW*VYDLCLNSRRM
Trigger: CATCCGACGTGAGTTCAAGCACAGATCATACACCAACCAAAGCCCAGAGGAATGTGGCCACCAGCGAAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS TCA 72 bp ATGGAGGATGAAGATGTGGACGAACCCCTTCCATTCTaGAATCCTGGCAAAGTCGGTGGGCATATCAAGGCT +
Preference number: 6 (lower is better)
Translates to: MEDEDVDEPLPF*NPGKVGGHIKA
Trigger: AGCCTTGATATGCCCACCGACTTTGCCAGGATTTCAGAATGGAAGGGGTTCGTCCACATCTTCATCCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS TCA 72 bp ATCAAAGACAGCCTCGTTCGAGATATTGTAACATCCTaGGACTTCCAGGCGCCTCAGTTCTGGACAGCACTG +
Preference number: 6 (lower is better)
Translates to: IKDSLVRDIVTS*DFQAPQFWTAL
Trigger: CAGTGCTGTCCAGAACTGAGGCGCCTGGAAGTCTCAGGATGTTACAATATCTCGAACGAGGCTGTCTTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CAA 72 bp TTACCAATGTCCAGCGACTTAAGTTTTGTACAGTTCTaGGCGAGGTACTCCACACCATGGTCCGTGATGCCC +
Preference number: 6 (lower is better)
Translates to: LPMSSDLSFVQF*ARYSTPWSVMP
Trigger: GGGCATCACGGACCATGGTGTGGAGTACCTCGCCAAGAACTGTACAAAACTTAAGTCGCTGGACATTGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11
CDS CAA 72 bp CAGTCCGTCATATCAAGGTATCGGATGGAAATCTGTTaGCCATGTAAGGGGGACAGTTTAATGGAGGCCTCC +
Preference number: 6 (lower is better)
Translates to: QSVISRYRMEIC*PCKGDSLMEAS
Trigger: GGAGGCCTCCATTAAACTGTCCCCCTTACATGGCAAACAGATTTCCATCCGATACCTTGATATGACGGACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000059204.11