Pregenerated sensors for FBXL6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022559Ensembl transcript IDs: ENSMUST00000023219.9
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCGACGGCTCCGGTCGGGGTTTGGTCCTGGGCTTGGCGACAGCCGTaGGGCCACGAGCCAGTGACCTCGGAGCGCGGCGACGGGCGCGCC | + |
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Preference number: 5 (lower is better) Translates to: ATAPVGVWSWAWRQP*GHEPVTSERGDGRA Trigger: GGCGCGCCCGTCGCCGCGCTCCGAGGTCACTGGCTCGTGGCCCCACGGCTGTCGCCAAGCCCAGGACCAAACCCCGACCGGAGCCGTCGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS GCA 90 bp | CAACATGCTGTCCGCTTGCAGCAGGTGGTACCCAGAGCCGCGAGGTaGCAGGCGGTCCCACCACCAGTCCTCCGCCGAGCGGCCCCGCGC | + |
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Preference number: 5 (lower is better) Translates to: QHAVRLQQVVPRAAR*QAVPPPVLRRAAPR Trigger: GCGCGGGGCCGCTCGGCGGAGGACTGGTGGTGGGACCGCCTGGCACCTCGCGGCTCTGGGTACCACCTGCTGCAAGCGGACAGCATGTTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS GCA 90 bp | CGGGGAGGCTCCAGGTCCGGCAGCACGAGCAACATGCTGTCCGCTTaGAGCAGGTGGTACCCAGAGCCGCGAGGTGCCAGGCGGTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: RGGSRSGSTSNMLSA*SRWYPEPRGARRSH Trigger: GTGGGACCGCCTGGCACCTCGCGGCTCTGGGTACCACCTGCTGCAAGCGGACAGCATGTTGCTCGTGCTGCCGGACCTGGAGCCTCCCCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CCA 90 bp | TCCAGGTCCGGCAGCACGAGCAACATGCTGTCCGCTTGCAGCAGGTaGTACCCAGAGCCGCGAGGTGCCAGGCGGTCCCACCACCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: SRSGSTSNMLSACSR*YPEPRGARRSHHQS Trigger: GGACTGGTGGTGGGACCGCCTGGCACCTCGCGGCTCTGGGTACCACCTGCTGCAAGCGGACAGCATGTTGCTCGTGCTGCCGGACCTGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CCA 90 bp | GACTGGGGAAGCCTGGTCCCTGGGGCACGCCTCGGCCACACGGCTTaGGAAGCCAAATCAGATTCAGCAGCCGCAGCACCTGCAGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: DWGSLVPGARLGHTA*EAKSDSAAAAPAAG Trigger: CCCAGCTGCAGGTGCTGCGGCTGCTGAATCTGATTTGGCTTCCCAAGCCGTGTGGCCGAGGCGTGCCCCAGGGACCAGGCTTCCCCAGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CCA 90 bp | GCAGGTGGAGCCAGCCAAACAGAGCTCCTCAAGACTGGGGAAGCCTaGTCCCTGGGGCACGCCTCGGCCACACGGCTTGGGAAGCCAAAT | + |
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Preference number: 5 (lower is better) Translates to: AGGASQTELLKTGEA*SLGHASATRLGKPN Trigger: ATTTGGCTTCCCAAGCCGTGTGGCCGAGGCGTGCCCCAGGGACCAGGCTTCCCCAGTCTTGAGGAGCTCTGTTTGGCTGGCTCCACCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS GCA 90 bp | GATGGGAGGTGGCTTCGTGCCAGTGACGGCAAACGCGTGCAGCCCTaGCAAGAAACGGCATGGGCCCATGAGCCGCAACCAACAACCCGA | + |
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Preference number: 5 (lower is better) Translates to: DGRWLRASDGKRVQP*QETAWAHEPQPTTR Trigger: TCGGGTTGTTGGTTGCGGCTCATGGGCCCATGCCGTTTCTTGGCAGGGCTGCACGCGTTTGCCGTCACTGGCACGAAGCCACCTCCCATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CCA 90 bp | TCACAAAGTTGCAGGTGGAGCCAGCCAAACAGAGCTCCTCAAGACTaGGGAAGCCTGGTCCCTGGGGCACGCCTCGGCCACACGGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: SQSCRWSQPNRAPQD*GSLVPGARLGHTAW Trigger: CCAAGCCGTGTGGCCGAGGCGTGCCCCAGGGACCAGGCTTCCCCAGTCTTGAGGAGCTCTGTTTGGCTGGCTCCACCTGCAACTTTGTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS GCA 90 bp | GCTGACCTGGAGGACTTGGAGCTGTGGGCAGCAGTTGTCCAGCAGTaGGCCCAAGATGGCCGTCGTCTGGGAACTGTAGGTCAGCCACAG | + |
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Preference number: 5 (lower is better) Translates to: ADLEDLELWAAVVQQ*AQDGRRLGTVGQPQ Trigger: CTGTGGCTGACCTACAGTTCCCAGACGACGGCCATCTTGGGCGCACTGCTGGACAACTGCTGCCCACAGCTCCAAGTCCTCCAGGTCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS GCA 90 bp | ACCTGCAGCTGGGGGCAGCCTTTCTGCAGGGCTTCCACAGGCAGCTaGAGGGGTGTGTTGTTGCAGTTCATGCCAGTGCTGACCTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: TCSWGQPFCRASTGS*RGVLLQFMPVLTWR Trigger: CCTCCAGGTCAGCACTGGCATGAACTGCAACAACACACCCCTGCAGCTGCCTGTGGAAGCCCTGCAGAAAGGCTGCCCCCAGCTGCAGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CCA 90 bp | GAGCCAGCCAAACAGAGCTCCTCAAGACTGGGGAAGCCTGGTCCCTaGGGCACGCCTCGGCCACACGGCTTGGGAAGCCAAATCAGATTC | + |
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Preference number: 5 (lower is better) Translates to: EPAKQSSSRLGKPGP*GTPRPHGLGSQIRF Trigger: GAATCTGATTTGGCTTCCCAAGCCGTGTGGCCGAGGCGTGCCCCAGGGACCAGGCTTCCCCAGTCTTGAGGAGCTCTGTTTGGCTGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS GCA 90 bp | ATCAGATTCAGCAGCCGCAGCACCTGCAGCTGGGGGCAGCCTTTCTaGAGGGCTTCCACAGGCAGCTGCAGGGGTGTGTTGTTGCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: IRFSSRSTCSWGQPF*RASTGSCRGVLLQF Trigger: GAACTGCAACAACACACCCCTGCAGCTGCCTGTGGAAGCCCTGCAGAAAGGCTGCCCCCAGCTGCAGGTGCTGCGGCTGCTGAATCTGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CCA 90 bp | GCGAGGGTGACAGGGTCACAGTATGCCAGAGTGAAGGATGGGAGGTaGCTTCGTGCCAGTGACGGCAAACGCGTGCAGCCCTGCCAAGAA | + |
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Preference number: 5 (lower is better) Translates to: ARVTGSQYARVKDGR*LRASDGKRVQPCQE Trigger: TTCTTGGCAGGGCTGCACGCGTTTGCCGTCACTGGCACGAAGCCACCTCCCATCCTTCACTCTGGCATACTGTGACCCTGTCACCCTCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS TCA 90 bp | CCACAGGCAGCTGCAGGGGTGTGTTGTTGCAGTTCATGCCAGTGCTaGCCTGGAGGACTTGGAGCTGTGGGCAGCAGTTGTCCAGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: PQAAAGVCCCSSCQC*PGGLGAVGSSCPAV Trigger: CACTGCTGGACAACTGCTGCCCACAGCTCCAAGTCCTCCAGGTCAGCACTGGCATGAACTGCAACAACACACCCCTGCAGCTGCCTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS TCA 90 bp | TTCTCGCTGAAGCCTTGGCCACTGAAGTCCAGCTCCCTCAGGGTGTaGTACCACTTCCGGGTCAACAGGGGGCTGCCATCCTTAGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: FSLKPWPLKSSSLRV*YHFRVNRGLPSLAR Trigger: CCTGGCTAAGGATGGCAGCCCCCTGTTGACCCGGAAGTGGTATCACACCCTGAGGGAGCTGGACTTCAGTGGCCAAGGCTTCAGCGAGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CCA 90 bp | CGTGCCAGTGACGGCAAACGCGTGCAGCCCTGCCAAGAAACGGCATaGGCCCATGAGCCGCAACCAACAACCCGAAAATATGCACCAGGA | + |
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Preference number: 5 (lower is better) Translates to: RASDGKRVQPCQETA*AHEPQPTTRKYAPG Trigger: TCCTGGTGCATATTTTCGGGTTGTTGGTTGCGGCTCATGGGCCCATGCCGTTTCTTGGCAGGGCTGCACGCGTTTGCCGTCACTGGCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CCA 90 bp | GTTGTTGCAGTTCATGCCAGTGCTGACCTGGAGGACTTGGAGCTGTaGGCAGCAGTTGTCCAGCAGTGCGCCCAAGATGGCCGTCGTCTG | + |
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Preference number: 5 (lower is better) Translates to: VVAVHASADLEDLEL*AAVVQQCAQDGRRL Trigger: CAGACGACGGCCATCTTGGGCGCACTGCTGGACAACTGCTGCCCACAGCTCCAAGTCCTCCAGGTCAGCACTGGCATGAACTGCAACAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CCA 90 bp | GGACTTGGAGCTGTGGGCAGCAGTTGTCCAGCAGTGCGCCCAAGATaGCCGTCGTCTGGGAACTGTAGGTCAGCCACAGTTTACGCATTC | + |
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Preference number: 5 (lower is better) Translates to: GLGAVGSSCPAVRPR*PSSGNCRSATVYAF Trigger: GAATGCGTAAACTGTGGCTGACCTACAGTTCCCAGACGACGGCCATCTTGGGCGCACTGCTGGACAACTGCTGCCCACAGCTCCAAGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CCA 90 bp | CTAGCGCAGCCTCGAAGGTCCAGCATGCGCAGTTTCGGGGAGCGATaGAGCAATCGGCCCAGAACCTCATTGCTCACAAAGTTGCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: LAQPRRSSMRSFGER*SNRPRTSLLTKLQV Trigger: CACCTGCAACTTTGTGAGCAATGAGGTTCTGGGCCGATTGCTCCATCGCTCCCCGAAACTGCGCATGCTGGACCTTCGAGGCTGCGCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS GCA 90 bp | GGGAGCGATGGAGCAATCGGCCCAGAACCTCATTGCTCACAAAGTTaGAGGTGGAGCCAGCCAAACAGAGCTCCTCAAGACTGGGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: GSDGAIGPEPHCSQS*RWSQPNRAPQDWGS Trigger: GCTTCCCCAGTCTTGAGGAGCTCTGTTTGGCTGGCTCCACCTGCAACTTTGTGAGCAATGAGGTTCTGGGCCGATTGCTCCATCGCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS GCA 90 bp | TGCGCAGTTTCGGGGAGCGATGGAGCAATCGGCCCAGAACCTCATTaGTCACAAAGTTGCAGGTGGAGCCAGCCAAACAGAGCTCCTCAA | + |
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Preference number: 5 (lower is better) Translates to: CAVSGSDGAIGPEPH*SQSCRWSQPNRAPQ Trigger: TTGAGGAGCTCTGTTTGGCTGGCTCCACCTGCAACTTTGTGAGCAATGAGGTTCTGGGCCGATTGCTCCATCGCTCCCCGAAACTGCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CCA 90 bp | GATGGAGCAATCGGCCCAGAACCTCATTGCTCACAAAGTTGCAGGTaGAGCCAGCCAAACAGAGCTCCTCAAGACTGGGGAAGCCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: DGAIGPEPHCSQSCR*SQPNRAPQDWGSLV Trigger: GACCAGGCTTCCCCAGTCTTGAGGAGCTCTGTTTGGCTGGCTCCACCTGCAACTTTGTGAGCAATGAGGTTCTGGGCCGATTGCTCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CCA 90 bp | AGATATGCCATACAGGCCCAGGTAGAGTTGCTCCAGCTCTTGACATaGCAGATGACACAGACCGCTAGGAGTGACCCTAGCGCAGCCTCG | + |
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Preference number: 5 (lower is better) Translates to: RYAIQAQVELLQLLT*QMTQTARSDPSAAS Trigger: CGAGGCTGCGCTAGGGTCACTCCTAGCGGTCTGTGTCATCTGCCATGTCAAGAGCTGGAGCAACTCTACCTGGGCCTGTATGGCATATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS TCA 72 bp | CCTGGGCTTGGCGACAGCCGTGGGGCCACGAGCCAGTaGCCTCGGAGCGCGGCGACGGGCGCGCCGGTGCGC | + |
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Preference number: 6 (lower is better) Translates to: PGLGDSRGATSQ*PRSAATGAPVR Trigger: GCGCACCGGCGCGCCCGTCGCCGCGCTCCGAGGTCACTGGCTCGTGGCCCCACGGCTGTCGCCAAGCCCAGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CCA 72 bp | CCGGTCGGGGTTTGGTCCTGGGCTTGGCGACAGCCGTaGGGCCACGAGCCAGTGACCTCGGAGCGCGGCGAC | + |
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Preference number: 6 (lower is better) Translates to: PVGVWSWAWRQP*GHEPVTSERGD Trigger: GTCGCCGCGCTCCGAGGTCACTGGCTCGTGGCCCCACGGCTGTCGCCAAGCCCAGGACCAAACCCCGACCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS GCA 72 bp | GTCCGCTTGCAGCAGGTGGTACCCAGAGCCGCGAGGTaGCAGGCGGTCCCACCACCAGTCCTCCGCCGAGCG | + |
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Preference number: 6 (lower is better) Translates to: VRLQQVVPRAAR*QAVPPPVLRRA Trigger: CGCTCGGCGGAGGACTGGTGGTGGGACCGCCTGGCACCTCGCGGCTCTGGGTACCACCTGCTGCAAGCGGAC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CAA 90 bp | GCGGGGAGGCTCCAGGTCCGGCAGCACGAGCAACATGCTGTCCGCTaGCAGCAGGTGGTACCCAGAGCCGCGAGGTGCCAGGCGGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: AGRLQVRQHEQHAVR*QQVVPRAARCQAVP Trigger: TGGGACCGCCTGGCACCTCGCGGCTCTGGGTACCACCTGCTGCAAGCGGACAGCATGTTGCTCGTGCTGCCGGACCTGGAGCCTCCCCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CAA 90 bp | TCCCACCACCAGTCCTCCGCCGAGCGGCCCCGCGCATCGGGCCGCTaGGAGCTTCGAACTCGACGTCTAACTCGCCTAGAGGCCACGGGA | + |
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Preference number: 6 (lower is better) Translates to: SHHQSSAERPRASGR*ELRTRRLTRLEATG Trigger: TCCCGTGGCCTCTAGGCGAGTTAGACGTCGAGTTCGAAGCTCCAAGCGGCCCGATGCGCGGGGCCGCTCGGCGGAGGACTGGTGGTGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CCA 72 bp | GCCAGCCAAACAGAGCTCCTCAAGACTGGGGAAGCCTaGTCCCTGGGGCACGCCTCGGCCACACGGCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: ASQTELLKTGEA*SLGHASATRLG Trigger: CCCAAGCCGTGTGGCCGAGGCGTGCCCCAGGGACCAGGCTTCCCCAGTCTTGAGGAGCTCTGTTTGGCTGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS GCA 72 bp | TCCAGGTCCGGCAGCACGAGCAACATGCTGTCCGCTTaGAGCAGGTGGTACCCAGAGCCGCGAGGTGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SRSGSTSNMLSA*SRWYPEPRGAR Trigger: CCTGGCACCTCGCGGCTCTGGGTACCACCTGCTGCAAGCGGACAGCATGTTGCTCGTGCTGCCGGACCTGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CCA 72 bp | TGCAGGTGGAGCCAGCCAAACAGAGCTCCTCAAGACTaGGGAAGCCTGGTCCCTGGGGCACGCCTCGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: CRWSQPNRAPQD*GSLVPGARLGH Trigger: GTGGCCGAGGCGTGCCCCAGGGACCAGGCTTCCCCAGTCTTGAGGAGCTCTGTTTGGCTGGCTCCACCTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CAA 72 bp | CTCCAGGTCCGGCAGCACGAGCAACATGCTGTCCGCTaGCAGCAGGTGGTACCCAGAGCCGCGAGGTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LQVRQHEQHAVR*QQVVPRAARCQ Trigger: CTGGCACCTCGCGGCTCTGGGTACCACCTGCTGCAAGCGGACAGCATGTTGCTCGTGCTGCCGGACCTGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CAA 90 bp | AGACTGGGGAAGCCTGGTCCCTGGGGCACGCCTCGGCCACACGGCTaGGGAAGCCAAATCAGATTCAGCAGCCGCAGCACCTGCAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: RLGKPGPWGTPRPHG*GSQIRFSSRSTCSW Trigger: CCAGCTGCAGGTGCTGCGGCTGCTGAATCTGATTTGGCTTCCCAAGCCGTGTGGCCGAGGCGTGCCCCAGGGACCAGGCTTCCCCAGTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS GCA 72 bp | GCCCGGCCAACCAGCGAGGGTGACAGGGTCACAGTATaGCAGAGTGAAGGATGGGAGGTGGCTTCGTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: ARPTSEGDRVTV*QSEGWEVASCQ Trigger: CTGGCACGAAGCCACCTCCCATCCTTCACTCTGGCATACTGTGACCCTGTCACCCTCGCTGGTTGGCCGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS GCA 72 bp | GTGGGCTCTTTGGCAGAGGGCGGGCTGGTAAGTAGCTaGTCTAGACACCACTGGACTTCCTCCAGGCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: VGSLAEGGLVSS*SRHHWTSSRPR Trigger: CCGGGGCCTGGAGGAAGTCCAGTGGTGTCTAGAGCAGCTACTTACCAGCCCGCCCTCTGCCAAAGAGCCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CAA 72 bp | GTGCTGACCTGGAGGACTTGGAGCTGTGGGCAGCAGTaGTCCAGCAGTGCGCCCAAGATGGCCGTCGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: VLTWRTWSCGQQ*SSSAPKMAVVW Trigger: CCAGACGACGGCCATCTTGGGCGCACTGCTGGACAACTGCTGCCCACAGCTCCAAGTCCTCCAGGTCAGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CAA 90 bp | ACGAGCCACTCCAGGCAAGCAAGGAGCTTCTTCTCTCCCTTAAGGTaGCCCTTGCCAGCCCGGCCAACCAGCGAGGGTGACAGGGTCACA | + |
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Preference number: 6 (lower is better) Translates to: TSHSRQARSFFSPLR*PLPARPTSEGDRVT Trigger: TGTGACCCTGTCACCCTCGCTGGTTGGCCGGGCTGGCAAGGGCAACCTTAAGGGAGAGAAGAAGCTCCTTGCTTGCCTGGAGTGGCTCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS TCA 72 bp | AAGCCTTGGCCACTGAAGTCCAGCTCCCTCAGGGTGTaGTACCACTTCCGGGTCAACAGGGGGCTGCCATCC | + |
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Preference number: 6 (lower is better) Translates to: KPWPLKSSSLRV*YHFRVNRGLPS Trigger: GGATGGCAGCCCCCTGTTGACCCGGAAGTGGTATCACACCCTGAGGGAGCTGGACTTCAGTGGCCAAGGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS GCA 72 bp | GAGGACTTGGAGCTGTGGGCAGCAGTTGTCCAGCAGTaGGCCCAAGATGGCCGTCGTCTGGGAACTGTAGGT | + |
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Preference number: 6 (lower is better) Translates to: EDLELWAAVVQQ*AQDGRRLGTVG Trigger: ACCTACAGTTCCCAGACGACGGCCATCTTGGGCGCACTGCTGGACAACTGCTGCCCACAGCTCCAAGTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS GCA 72 bp | TGGGGGCAGCCTTTCTGCAGGGCTTCCACAGGCAGCTaGAGGGGTGTGTTGTTGCAGTTCATGCCAGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: WGQPFCRASTGS*RGVLLQFMPVL Trigger: CAGCACTGGCATGAACTGCAACAACACACCCCTGCAGCTGCCTGTGGAAGCCCTGCAGAAAGGCTGCCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CCA 72 bp | ACAGGGTCACAGTATGCCAGAGTGAAGGATGGGAGGTaGCTTCGTGCCAGTGACGGCAAACGCGTGCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: TGSQYARVKDGR*LRASDGKRVQP Trigger: GGGCTGCACGCGTTTGCCGTCACTGGCACGAAGCCACCTCCCATCCTTCACTCTGGCATACTGTGACCCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CAA 90 bp | CACTCCAGGCAAGCAAGGAGCTTCTTCTCTCCCTTAAGGTTGCCCTaGCCAGCCCGGCCAACCAGCGAGGGTGACAGGGTCACAGTATGC | + |
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Preference number: 6 (lower is better) Translates to: HSRQARSFFSPLRLP*PARPTSEGDRVTVC Trigger: GCATACTGTGACCCTGTCACCCTCGCTGGTTGGCCGGGCTGGCAAGGGCAACCTTAAGGGAGAGAAGAAGCTCCTTGCTTGCCTGGAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS TCA 72 bp | ACGCGTGCAGCCCTGCCAAGAAACGGCATGGGCCCATaGGCCGCAACCAACAACCCGAAAATATGCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: TRAALPRNGMGP*AATNNPKICTR Trigger: CCTGGTGCATATTTTCGGGTTGTTGGTTGCGGCTCATGGGCCCATGCCGTTTCTTGGCAGGGCTGCACGCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CAA 90 bp | GGGGAGCGATGGAGCAATCGGCCCAGAACCTCATTGCTCACAAAGTaGCAGGTGGAGCCAGCCAAACAGAGCTCCTCAAGACTGGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: GERWSNRPRTSLLTK*QVEPAKQSSSRLGK Trigger: CTTCCCCAGTCTTGAGGAGCTCTGTTTGGCTGGCTCCACCTGCAACTTTGTGAGCAATGAGGTTCTGGGCCGATTGCTCCATCGCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS TCA 72 bp | GCTGCAGGGGTGTGTTGTTGCAGTTCATGCCAGTGCTaGCCTGGAGGACTTGGAGCTGTGGGCAGCAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: AAGVCCCSSCQC*PGGLGAVGSSC Trigger: ACAACTGCTGCCCACAGCTCCAAGTCCTCCAGGTCAGCACTGGCATGAACTGCAACAACACACCCCTGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CCA 72 bp | GACGGCAAACGCGTGCAGCCCTGCCAAGAAACGGCATaGGCCCATGAGCCGCAACCAACAACCCGAAAATAT | + |
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Preference number: 6 (lower is better) Translates to: DGKRVQPCQETA*AHEPQPTTRKY Trigger: ATATTTTCGGGTTGTTGGTTGCGGCTCATGGGCCCATGCCGTTTCTTGGCAGGGCTGCACGCGTTTGCCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CCA 72 bp | AGGGGTGTGTTGTTGCAGTTCATGCCAGTGCTGACCTaGAGGACTTGGAGCTGTGGGCAGCAGTTGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RGVLLQFMPVLT*RTWSCGQQLSS Trigger: GCTGGACAACTGCTGCCCACAGCTCCAAGTCCTCCAGGTCAGCACTGGCATGAACTGCAACAACACACCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CCA 72 bp | CCTCGAAGGTCCAGCATGCGCAGTTTCGGGGAGCGATaGAGCAATCGGCCCAGAACCTCATTGCTCACAAAG | + |
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Preference number: 6 (lower is better) Translates to: PRRSSMRSFGER*SNRPRTSLLTK Trigger: CTTTGTGAGCAATGAGGTTCTGGGCCGATTGCTCCATCGCTCCCCGAAACTGCGCATGCTGGACCTTCGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CAA 90 bp | ATGCGCAGTTTCGGGGAGCGATGGAGCAATCGGCCCAGAACCTCATaGCTCACAAAGTTGCAGGTGGAGCCAGCCAAACAGAGCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: MRSFGERWSNRPRTS*LTKLQVEPAKQSSS Trigger: TGAGGAGCTCTGTTTGGCTGGCTCCACCTGCAACTTTGTGAGCAATGAGGTTCTGGGCCGATTGCTCCATCGCTCCCCGAAACTGCGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CAA 90 bp | GCCATCAGATATGCCATACAGGCCCAGGTAGAGTTGCTCCAGCTCTaGACATGGCAGATGACACAGACCGCTAGGAGTGACCCTAGCGCA | + |
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Preference number: 6 (lower is better) Translates to: AIRYAIQAQVELLQL*TWQMTQTARSDPSA Trigger: TGCGCTAGGGTCACTCCTAGCGGTCTGTGTCATCTGCCATGTCAAGAGCTGGAGCAACTCTACCTGGGCCTGTATGGCATATCTGATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS GCA 72 bp | GGAGCAATCGGCCCAGAACCTCATTGCTCACAAAGTTaGAGGTGGAGCCAGCCAAACAGAGCTCCTCAAGAC | + |
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Preference number: 6 (lower is better) Translates to: GAIGPEPHCSQS*RWSQPNRAPQD Trigger: GTCTTGAGGAGCTCTGTTTGGCTGGCTCCACCTGCAACTTTGTGAGCAATGAGGTTCTGGGCCGATTGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CCA 72 bp | ATCGGCCCAGAACCTCATTGCTCACAAAGTTGCAGGTaGAGCCAGCCAAACAGAGCTCCTCAAGACTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: IGPEPHCSQSCR*SQPNRAPQDWG Trigger: TCCCCAGTCTTGAGGAGCTCTGTTTGGCTGGCTCCACCTGCAACTTTGTGAGCAATGAGGTTCTGGGCCGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CCA 72 bp | ATACAGGCCCAGGTAGAGTTGCTCCAGCTCTTGACATaGCAGATGACACAGACCGCTAGGAGTGACCCTAGC | + |
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Preference number: 6 (lower is better) Translates to: IQAQVELLQLLT*QMTQTARSDPS Trigger: GCTAGGGTCACTCCTAGCGGTCTGTGTCATCTGCCATGTCAAGAGCTGGAGCAACTCTACCTGGGCCTGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CAA 90 bp | AGCCAGGGTCAAGCCATCAGATATGCCATACAGGCCCAGGTAGAGTaGCTCCAGCTCTTGACATGGCAGATGACACAGACCGCTAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: SQGQAIRYAIQAQVE*LQLLTWQMTQTARS Trigger: ACTCCTAGCGGTCTGTGTCATCTGCCATGTCAAGAGCTGGAGCAACTCTACCTGGGCCTGTATGGCATATCTGATGGCTTGACCCTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CAA 72 bp | TGGAGCAATCGGCCCAGAACCTCATTGCTCACAAAGTaGCAGGTGGAGCCAGCCAAACAGAGCTCCTCAAGA | + |
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Preference number: 6 (lower is better) Translates to: WSNRPRTSLLTK*QVEPAKQSSSR Trigger: TCTTGAGGAGCTCTGTTTGGCTGGCTCCACCTGCAACTTTGTGAGCAATGAGGTTCTGGGCCGATTGCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CAA 72 bp | TATGCCATACAGGCCCAGGTAGAGTTGCTCCAGCTCTaGACATGGCAGATGACACAGACCGCTAGGAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: YAIQAQVELLQL*TWQMTQTARSD Trigger: GTCACTCCTAGCGGTCTGTGTCATCTGCCATGTCAAGAGCTGGAGCAACTCTACCTGGGCCTGTATGGCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CAA 90 bp | GAGCCGAGGGCAGAACTTGCTAACCAGCTCCAACACAGAGTGTACTaGAGACTTCCAGTGGATGAGGGTCAAGCTCTGGAGCTGAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: EPRAELANQLQHRVY*RLPVDEGQALELRE Trigger: TTCTCTCAGCTCCAGAGCTTGACCCTCATCCACTGGAAGTCTCAAGTACACTCTGTGTTGGAGCTGGTTAGCAAGTTCTGCCCTCGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS TCA 72 bp | GCTCCAACACAGAGTGTACTTGAGACTTCCAGTGGATaGGGGTCAAGCTCTGGAGCTGAGAGAACCGATTGG | + |
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Preference number: 6 (lower is better) Translates to: APTQSVLETSSG*GSSSGAERTDW Trigger: CCAATCGGTTCTCTCAGCTCCAGAGCTTGACCCTCATCCACTGGAAGTCTCAAGTACACTCTGTGTTGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS TCA 72 bp | CATGACCAGAGTTTCAGCAGTCACAGTGTGGCAGTCTaGAAGCTTGAGGAAGGTGAGCCGAGGGCAGAACTT | + |
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Preference number: 6 (lower is better) Translates to: HDQSFSSHSVAV*KLEEGEPRAEL Trigger: AAGTTCTGCCCTCGGCTCACCTTCCTCAAGCTTTCAGACTGCCACACTGTGACTGCTGAAACTCTGGTCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CAA 72 bp | CAAGCCATCAGATATGCCATACAGGCCCAGGTAGAGTaGCTCCAGCTCTTGACATGGCAGATGACACAGACC | + |
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Preference number: 6 (lower is better) Translates to: QAIRYAIQAQVE*LQLLTWQMTQT Trigger: GGTCTGTGTCATCTGCCATGTCAAGAGCTGGAGCAACTCTACCTGGGCCTGTATGGCATATCTGATGGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CAA 90 bp | AACATGACCAGAGTTTCAGCAGTCACAGTGTGGCAGTCTGAAAGCTaGAGGAAGGTGAGCCGAGGGCAGAACTTGCTAACCAGCTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: NMTRVSAVTVWQSES*RKVSRGQNLLTSSN Trigger: GTTGGAGCTGGTTAGCAAGTTCTGCCCTCGGCTCACCTTCCTCAAGCTTTCAGACTGCCACACTGTGACTGCTGAAACTCTGGTCATGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS TCA 72 bp | CAGAACTTGCTAACCAGCTCCAACACAGAGTGTACTTaGGACTTCCAGTGGATGAGGGTCAAGCTCTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: QNLLTSSNTECT*DFQWMRVKLWS Trigger: GCTCCAGAGCTTGACCCTCATCCACTGGAAGTCTCAAGTACACTCTGTGTTGGAGCTGGTTAGCAAGTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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| CDS CAA 72 bp | GCAGAACTTGCTAACCAGCTCCAACACAGAGTGTACTaGAGACTTCCAGTGGATGAGGGTCAAGCTCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: AELANQLQHRVY*RLPVDEGQALE Trigger: CTCCAGAGCTTGACCCTCATCCACTGGAAGTCTCAAGTACACTCTGTGTTGGAGCTGGTTAGCAAGTTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023219.9 |
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