Pregenerated sensors for FBXL22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050503Ensembl transcript IDs: ENSMUST00000056890.10
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCGAGGAGGAGCCGGGGCTCTCACACCTCCCTCCCCTTGTGCTGCTaGCATCCCGGCCTACAGCAGAGCCTCAAGCATGGCTGGTGTGAG | + |
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Preference number: 1 (lower is better) Translates to: PRRSRGSHTSLPLCC*HPGLQQSLKHGWCE Trigger: CTCACACCAGCCATGCTTGAGGCTCTGCTGTAGGCCGGGATGCCAGCAGCACAAGGGGAGGGAGGTGTGAGAGCCCCGGCTCCTCCTCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR GCA 90 bp | TACCTACCGAGGAGGAGCCGGGGCTCTCACACCTCCCTCCCCTTGTaGTGCTGGCATCCCGGCCTACAGCAGAGCCTCAAGCATGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: YLPRRSRGSHTSLPL*CWHPGLQQSLKHGW Trigger: CCAGCCATGCTTGAGGCTCTGCTGTAGGCCGGGATGCCAGCAGCACAAGGGGAGGGAGGTGTGAGAGCCCCGGCTCCTCCTCGGTAGGTA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR TCA 90 bp | CTGCTTGCCCATCCCCTGCCTAGAGAGGGAGGCTGCTGGGTGAACTaGGAGGGCCGTGGCCACAGGGTCTTGGCAACTAAAGTGAAGTTG | + |
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Preference number: 1 (lower is better) Translates to: LLAHPLPREGGCWVN*EGRGHRVLATKVKL Trigger: CAACTTCACTTTAGTTGCCAAGACCCTGTGGCCACGGCCCTCTCAGTTCACCCAGCAGCCTCCCTCTCTAGGCAGGGGATGGGCAAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR GCA 90 bp | GAGTGCCAGCTGAGTATGCCGGGTGGTGGGAAAGAGGAGCCCCCTTaGTGTGAGGCTCCTGCTGCAGTGTACCAGAAAGCATTGGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: ECQLSMPGGGKEEPP*CEAPAAVYQKALEV Trigger: GACCTCCAATGCTTTCTGGTACACTGCAGCAGGAGCCTCACAGCAAGGGGGCTCCTCTTTCCCACCACCCGGCATACTCAGCTGGCACTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR CCA 90 bp | TTGTGTACCCTGATTCTGGGTGAGGCACTGCCACAGCTCAGAACCTaGCAGCAGCAGGAAAGTCCCTCAGCAGTCCCCAGGGCCTTGGAG | + |
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Preference number: 1 (lower is better) Translates to: LCTLILGEALPQLRT*QQQESPSAVPRALE Trigger: CTCCAAGGCCCTGGGGACTGCTGAGGGACTTTCCTGCTGCTGCCAGGTTCTGAGCTGTGGCAGTGCCTCACCCAGAATCAGGGTACACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR CCA 90 bp | GAACCTGGCAGCAGCAGGAAAGTCCCTCAGCAGTCCCCAGGGCCTTaGAGGCTATGCCTGCCACACGTGCCTGAATGTTGTTCAGTGGAA | + |
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Preference number: 1 (lower is better) Translates to: EPGSSRKVPQQSPGP*RLCLPHVPECCSVE Trigger: TTCCACTGAACAACATTCAGGCACGTGTGGCAGGCATAGCCTCCAAGGCCCTGGGGACTGCTGAGGGACTTTCCTGCTGCTGCCAGGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR CCA 90 bp | TTGTGCTGCTGGCATCCCGGCCTACAGCAGAGCCTCAAGCATGGCTaGTGTGAGGCAGCACCTCTGTGCCAATGTACCAAAGGACAGCAA | + |
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Preference number: 1 (lower is better) Translates to: LCCWHPGLQQSLKHG*CEAAPLCQCTKGQQ Trigger: TTGCTGTCCTTTGGTACATTGGCACAGAGGTGCTGCCTCACACCAGCCATGCTTGAGGCTCTGCTGTAGGCCGGGATGCCAGCAGCACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR TCA 90 bp | AGAAGGCATTACACCAGGCCACGACTTGTGTACCCTGATTCTGGGTaGGGCACTGCCACAGCTCAGAACCTGGCAGCAGCAGGAAAGTCC | + |
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Preference number: 1 (lower is better) Translates to: RRHYTRPRLVYPDSG*GTATAQNLAAAGKS Trigger: GGACTTTCCTGCTGCTGCCAGGTTCTGAGCTGTGGCAGTGCCTCACCCAGAATCAGGGTACACAAGTCGTGGCCTGGTGTAATGCCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR TCA 90 bp | TCAGCAGTCCCCAGGGCCTTGGAGGCTATGCCTGCCACACGTGCCTaGATGTTGTTCAGTGGAACTTCACACACTTTCGCTGTTTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: SAVPRALEAMPATRA*MLFSGTSHTFAVWW Trigger: CCACCAAACAGCGAAAGTGTGTGAAGTTCCACTGAACAACATTCAGGCACGTGTGGCAGGCATAGCCTCCAAGGCCCTGGGGACTGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR TCA 90 bp | CACCTTGCTCTCTGGGCCATTCAGAAACTGGGGACAGATTTCTTCTaGAAAGGATACCTACCGAGGAGGAGCCGGGGCTCTCACACCTCC | + |
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Preference number: 1 (lower is better) Translates to: HLALWAIQKLGTDFF*KGYLPRRSRGSHTS Trigger: GGAGGTGTGAGAGCCCCGGCTCCTCCTCGGTAGGTATCCTTTTCAGAAGAAATCTGTCCCCAGTTTCTGAATGGCCCAGAGAGCAAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR GCA 90 bp | TCCCTCAGCAGTCCCCAGGGCCTTGGAGGCTATGCCTGCCACACGTaGCTGAATGTTGTTCAGTGGAACTTCACACACTTTCGCTGTTTG | + |
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Preference number: 1 (lower is better) Translates to: SLSSPQGLGGYACHT*LNVVQWNFTHFRCL Trigger: CAAACAGCGAAAGTGTGTGAAGTTCCACTGAACAACATTCAGGCACGTGTGGCAGGCATAGCCTCCAAGGCCCTGGGGACTGCTGAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR GCA 90 bp | GCAGGAAAGTCCCTCAGCAGTCCCCAGGGCCTTGGAGGCTATGCCTaGCACACGTGCCTGAATGTTGTTCAGTGGAACTTCACACACTTT | + |
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Preference number: 1 (lower is better) Translates to: AGKSLSSPQGLGGYA*HTCLNVVQWNFTHF Trigger: AAAGTGTGTGAAGTTCCACTGAACAACATTCAGGCACGTGTGGCAGGCATAGCCTCCAAGGCCCTGGGGACTGCTGAGGGACTTTCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR TCA 90 bp | AAACGAAGGAGTCTTGATTATAGATGGCAGCCAGAGAAGCCTGGCTaGGCTTCCCCACCCCCTAGCTGTGCTCATTTAACCTGCTTGCCC | + |
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Preference number: 1 (lower is better) Translates to: KRRSLDYRWQPEKPG*ASPPPSCAHLTCLP Trigger: GGGCAAGCAGGTTAAATGAGCACAGCTAGGGGGTGGGGAAGCTCAGCCAGGCTTCTCTGGCTGCCATCTATAATCAAGACTCCTTCGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR CCA 90 bp | ATGCCTGCCAGTGGGAACATCGTCAGCACAGTTGGAACACTCCACTaGGAGCTTTCCCAAAGATTAGAAGGCATTACACCAGGCCACGAC | + |
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Preference number: 1 (lower is better) Translates to: MPASGNIVSTVGTLH*ELSQRLEGITPGHD Trigger: GTCGTGGCCTGGTGTAATGCCTTCTAATCTTTGGGAAAGCTCCCAGTGGAGTGTTCCAACTGTGCTGACGATGTTCCCACTGGCAGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR CCA 90 bp | CCAGTATGGTGCCCTGCAGTTTCTTGGACTGTAGCACTTTCCATATaGCTTGCTTGGCTCCCTGGCTGGTTTCATGGCTCAAGTGTCAAC | + |
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Preference number: 1 (lower is better) Translates to: PVWCPAVSWTVALSI*LAWLPGWFHGSSVN Trigger: GTTGACACTTGAGCCATGAAACCAGCCAGGGAGCCAAGCAAGCCATATGGAAAGTGCTACAGTCCAAGAAACTGCAGGGCACCATACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR CCA 90 bp | AGAAGATTTGCTCTGCCTGGAGACTGTGGGAGCACTCTAGTAAGATaGTGCCCGACAAACCCACTTGTCTCAGGTCTGCAGAGATGCAGA | + |
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Preference number: 1 (lower is better) Translates to: RRFALPGDCGSTLVR*CPTNPLVSGLQRCR Trigger: TCTGCATCTCTGCAGACCTGAGACAAGTGGGTTTGTCGGGCACCATCTTACTAGAGTGCTCCCACAGTCTCCAGGCAGAGCAAATCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR CCA 90 bp | TTGCAGTCTGCCAGTGTCACCTTGCTCTCTGGGCCATTCAGAAACTaGGGACAGATTTCTTCTGAAAAGGATACCTACCGAGGAGGAGCC | + |
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Preference number: 1 (lower is better) Translates to: LQSASVTLLSGPFRN*GQISSEKDTYRGGA Trigger: GGCTCCTCCTCGGTAGGTATCCTTTTCAGAAGAAATCTGTCCCCAGTTTCTGAATGGCCCAGAGAGCAAGGTGACACTGGCAGACTGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR CCA 90 bp | TGCCCTGCAGTTTCTTGGACTGTAGCACTTTCCATATGGCTTGCTTaGCTCCCTGGCTGGTTTCATGGCTCAAGTGTCAACCTTCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: CPAVSWTVALSIWLA*LPGWFHGSSVNLLH Trigger: ATGGAGAAGGTTGACACTTGAGCCATGAAACCAGCCAGGGAGCCAAGCAAGCCATATGGAAAGTGCTACAGTCCAAGAAACTGCAGGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR TCA 90 bp | TTGGCTCCCTGGCTGGTTTCATGGCTCAAGTGTCAACCTTCTCCATaGCATTTAGTTTGGTTATCCCCACCCACCCCACAAGCCTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: LAPWLVSWLKCQPSP*HLVWLSPPTPQAFF Trigger: AAAGAAGGCTTGTGGGGTGGGTGGGGATAACCAAACTAAATGTCATGGAGAAGGTTGACACTTGAGCCATGAAACCAGCCAGGGAGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR GCA 90 bp | AGGCTGCTTCCTGTGGACTCAATGAAAAGGCCATTGCTGACAGCCTaGTCAAATAAGGTACCAGGCAGAGAAACGGGAAGGCAAGTTTAC | + |
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Preference number: 1 (lower is better) Translates to: RLLPVDSMKRPLLTA*SNKVPGRETGRQVY Trigger: GTAAACTTGCCTTCCCGTTTCTCTGCCTGGTACCTTATTTGAGCAGGCTGTCAGCAATGGCCTTTTCATTGAGTCCACAGGAAGCAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR CCA 90 bp | AATGTTGTTCAGTGGAACTTCACACACTTTCGCTGTTTGGTGGTCTaGCTCCTGCTGGCATGCGGTTACCTCCAAGGGCTCATTTTATCC | + |
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Preference number: 1 (lower is better) Translates to: NVVQWNFTHFRCLVV*LLLACGYLQGLILS Trigger: GGATAAAATGAGCCCTTGGAGGTAACCGCATGCCAGCAGGAGCCAGACCACCAAACAGCGAAAGTGTGTGAAGTTCCACTGAACAACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR TCA 90 bp | GACAAACCCACTTGTCTCAGGTCTGCAGAGATGCAGATAGCATGGTaGTGCTGCCTCTTAGCTGGAAACCTGCATGCTTGCTTTGAGTTT | + |
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Preference number: 1 (lower is better) Translates to: DKPTCLRSAEMQIAW*CCLLAGNLHACFEF Trigger: AAACTCAAAGCAAGCATGCAGGTTTCCAGCTAAGAGGCAGCATCACCATGCTATCTGCATCTCTGCAGACCTGAGACAAGTGGGTTTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR TCA 90 bp | AAAGGGGACAGTGGTCCAAAAGAGACAGCTGTGCACATGCATCAGTaGGTGGATGGGTGGCTGACAGTGTACATTCATACAAGGGTTAGT | + |
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Preference number: 1 (lower is better) Translates to: KGDSGPKETAVHMHQ*VDGWLTVYIHTRVS Trigger: ACTAACCCTTGTATGAATGTACACTGTCAGCCACCCATCCACTCACTGATGCATGTGCACAGCTGTCTCTTTTGGACCACTGTCCCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR TCA 90 bp | CATAAACCCTCTACCTTCAAAAACCAAGCTTTTCCCAGATGTCCATaGACATGTGACCTTTGTCAGATGAAGCTCTGTGTCTGCCAAGCT | + |
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Preference number: 1 (lower is better) Translates to: HKPSTFKNQAFPRCP*TCDLCQMKLCVCQA Trigger: AGCTTGGCAGACACAGAGCTTCATCTGACAAAGGTCACATGTTCATGGACATCTGGGAAAAGCTTGGTTTTTGAAGGTAGAGGGTTTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR TCA 90 bp | CTCTACCTTCAAAAACCAAGCTTTTCCCAGATGTCCATGAACATGTaGCCTTTGTCAGATGAAGCTCTGTGTCTGCCAAGCTCAGTATTT | + |
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Preference number: 1 (lower is better) Translates to: LYLQKPSFSQMSMNM*PLSDEALCLPSSVF Trigger: AAATACTGAGCTTGGCAGACACAGAGCTTCATCTGACAAAGGTCACATGTTCATGGACATCTGGGAAAAGCTTGGTTTTTGAAGGTAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR GCA 90 bp | TTTTCCCTTGTGAGAAACAGGAGAAATAATAGTAACTATCAGTCATaGAGGGACAGGAGTGAGTTTTCTAGAATGGCTTGTGCATCTCGC | + |
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Preference number: 1 (lower is better) Translates to: FSLVRNRRNNSNYQS*RDRSEFSRMACASR Trigger: GCGAGATGCACAAGCCATTCTAGAAAACTCACTCCTGTCCCTGCATGACTGATAGTTACTATTATTTCTCCTGTTTCTCACAAGGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR-3UTR TCA 90 bp | GTGGTGGGAAAGAGGAGCCCCCTTGCTGTGAGGCTCCTGCTGCAGTGTACCAGACGCACGGTCTGGCAGTaGGCAGCCAGGGAGACTCTC | + |
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Preference number: 2 (lower is better) Translates to: VVGKRSPLAVRLLLQCTRRTVWQ*AARETL Trigger: GAGAGTCTCCCTGGCTGCTCACTGCCAGACCGTGCG...TCTGGTACACTGCAGCAGGAGCCTCACAGCAAGGGGGCTCCTCTTTCCCACCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR-3UTR GCA 90 bp | GGTGAGGCACTGCCACAGCTCAGAACCTGGCAGCAGCAGGAAAGTCCCTCAGCATGGTGGTCTGGCTCCTaGTGGCATGCGGTTACCTCC | + |
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Preference number: 2 (lower is better) Translates to: GEALPQLRTWQQQESPSAWWSGS*WHAVTS Trigger: GGAGGTAACCGCATGCCAGCAGGAGCCAGACCACCA...TGCTGAGGGACTTTCCTGCTGCTGCCAGGTTCTGAGCTGTGGCAGTGCCTCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR-3UTR CCA 90 bp | GTGAGGCACTGCCACAGCTCAGAACCTGGCAGCAGCAGGAAAGTCCCTCAGCAGGCTTGCTTGGCTCCCTaGCTGGTTTCATGGCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: VRHCHSSEPGSSRKVPQQACLAP*LVSWLK Trigger: CTTGAGCCATGAAACCAGCCAGGGAGCCAAGCAAGC...CTGCTGAGGGACTTTCCTGCTGCTGCCAGGTTCTGAGCTGTGGCAGTGCCTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR-3UTR TCA 90 bp | AGCAGACATGAGCCCAAACAGAGTGAGCTTTGCAGTCTGCCAGTGTCACCTTGCGGAGCCCCCTTGCTGTaGGGCTCCTGCTGCAGTGTA | + |
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Preference number: 2 (lower is better) Translates to: SRHEPKQSELCSLPVSPCGAPLL*GSCCSV Trigger: TACACTGCAGCAGGAGCCTCACAGCAAGGGGGCTCC...GCAAGGTGACACTGGCAGACTGCAAAGCTCACTCTGTTTGGGCTCATGTCTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR-3UTR GCA 90 bp | GTGAGGCACTGCCACAGCTCAGAACCTGGCAGCAGCAGGAAAGTCCCTCAGCAGCTCTACTCCTCTCCCTaGTTCAGCCATGCTGATCTC | + |
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Preference number: 2 (lower is better) Translates to: VRHCHSSEPGSSRKVPQQLYSSP*FSHADL Trigger: GAGATCAGCATGGCTGAAGCAGGGAGAGGAGTAGAG...CTGCTGAGGGACTTTCCTGCTGCTGCCAGGTTCTGAGCTGTGGCAGTGCCTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR-3UTR CCA 90 bp | ATCCCGGCCTACAGCAGAGCCTCAAGCATGGCTGGTGTGAGGCAGCACCTCTGTGTAGCACTTTCCATATaGCTTGCTTGGCTCCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: IPAYSRASSMAGVRQHLCVALSI*LAWLPG Trigger: GCCAGGGAGCCAAGCAAGCCATATGGAAAGTGCTAC...ACAGAGGTGCTGCCTCACACCAGCCATGCTTGAGGCTCTGCTGTAGGCCGGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR-3UTR GCA 90 bp | GTGGTGGGAAAGAGGAGCCCCCTTGCTGTGAGGCTCCTGCTGCAGTGTACCAGATCCAGTATGGTGCCCTaGAGTTTCTTGGACTGTAGC | + |
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Preference number: 2 (lower is better) Translates to: VVGKRSPLAVRLLLQCTRSSMVP*SFLDCS Trigger: GCTACAGTCCAAGAAACTGCAGGGCACCATACTGGA...TCTGGTACACTGCAGCAGGAGCCTCACAGCAAGGGGGCTCCTCTTTCCCACCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR-3UTR GCA 90 bp | CATCCCGGCCTACAGCAGAGCCTCAAGCATGGCTGGTGTGAGGCAGCACCTCTGCAAAAGAGACAGCTGTaGACATGCATCAGTGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: HPGLQQSLKHGWCEAAPLQKRQL*TCISEW Trigger: CCACTCACTGATGCATGTGCACAGCTGTCTCTTTTG...CAGAGGTGCTGCCTCACACCAGCCATGCTTGAGGCTCTGCTGTAGGCCGGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR CAA 90 bp | GTCGCACATCCCTCGAATGCTTCCAGTATGGTGCCCTGCAGTTTCTaGGACTGTAGCACTTTCCATATGGCTTGCTTGGCTCCCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: VAHPSNASSMVPCSF*DCSTFHMACLAPWL Trigger: CAGCCAGGGAGCCAAGCAAGCCATATGGAAAGTGCTACAGTCCAAGAAACTGCAGGGCACCATACTGGAAGCATTCGAGGGATGTGCGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR CAA 90 bp | TGGGAGCTTTCCCAAAGATTAGAAGGCATTACACCAGGCCACGACTaGTGTACCCTGATTCTGGGTGAGGCACTGCCACAGCTCAGAACC | + |
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Preference number: 2 (lower is better) Translates to: WELSQRLEGITPGHD*CTLILGEALPQLRT Trigger: GGTTCTGAGCTGTGGCAGTGCCTCACCCAGAATCAGGGTACACAAGTCGTGGCCTGGTGTAATGCCTTCTAATCTTTGGGAAAGCTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR-3UTR GCA 90 bp | CATCCCGGCCTACAGCAGAGCCTCAAGCATGGCTGGTGTGAGGCAGCACCTCTGGTGTATTTCCTTAATTaGTGGCCTCGTTCAGTTAAC | + |
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Preference number: 2 (lower is better) Translates to: HPGLQQSLKHGWCEAAPLVYFLN*WPRSVN Trigger: GTTAACTGAACGAGGCCAGCAATTAAGGAAATACAC...CAGAGGTGCTGCCTCACACCAGCCATGCTTGAGGCTCTGCTGTAGGCCGGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR-3UTR CCA 90 bp | GGTGCCCGACAAACCCACTTGTCTCAGGTCTGCAGAGATGCAGATAGCATGGTGCCCTGGCTGGTTTCATaGCTCAAGTGTCAACCTTCT | + |
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Preference number: 2 (lower is better) Translates to: GARQTHLSQVCRDADSMVPWLVS*LKCQPS Trigger: AGAAGGTTGACACTTGAGCCATGAAACCAGCCAGGG...CACCATGCTATCTGCATCTCTGCAGACCTGAGACAAGTGGGTTTGTCGGGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR-3UTR CCA 90 bp | AGTCTGCCAGTGTCACCTTGCTCTCTGGGCCATTCAGAAACTGGGGACAGATTTGCTTGGCTCCCTGGCTaGTTTCATGGCTCAAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: SLPVSPCSLGHSETGDRFAWLPG*FHGSSV Trigger: GACACTTGAGCCATGAAACCAGCCAGGGAGCCAAGC...AAATCTGTCCCCAGTTTCTGAATGGCCCAGAGAGCAAGGTGACACTGGCAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR-3UTR CCA 90 bp | TCCCAAAGATTAGAAGGCATTACACCAGGCCACGACTTGTGTACCCTGATTCTGCGCTGTTTGGTGGTCTaGCTCCTGCTGGCATGCGGT | + |
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Preference number: 2 (lower is better) Translates to: SQRLEGITPGHDLCTLILRCLVV*LLLACG Trigger: ACCGCATGCCAGCAGGAGCCAGACCACCAAACAGCG...CAGAATCAGGGTACACAAGTCGTGGCCTGGTGTAATGCCTTCTAATCTTTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR CAA 90 bp | GTGCCCTGCAGTTTCTTGGACTGTAGCACTTTCCATATGGCTTGCTaGGCTCCCTGGCTGGTTTCATGGCTCAAGTGTCAACCTTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: VPCSFLDCSTFHMAC*APWLVSWLKCQPSP Trigger: TGGAGAAGGTTGACACTTGAGCCATGAAACCAGCCAGGGAGCCAAGCAAGCCATATGGAAAGTGCTACAGTCCAAGAAACTGCAGGGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR-3UTR TCA 90 bp | CAATGTACCAAAGGACAGCAAAGGGGACAGTGGTCCAAAAGAGACAGCTGTGCACCGGATCTGGGCCTTTaGCAGAAGATTTGCTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: QCTKGQQRGQWSKRDSCAPDLGL*QKICSA Trigger: GGCAGAGCAAATCTTCTGTCAAAGGCCCAGATCCGG...TGCACAGCTGTCTCTTTTGGACCACTGTCCCCTTTGCTGTCCTTTGGTACATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR CAA 90 bp | CTCCTGCTGCAGTGTACCAGAAAGCATTGGAGGTCAGTAGGCAGCTaGTCTCTTTTCCTCCCATCTAATCTGTGTCACAGGCTGCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: LLLQCTRKHWRSVGS*SLFLPSNLCHRLLP Trigger: AGGAAGCAGCCTGTGACACAGATTAGATGGGAGGAAAAGAGACAAGCTGCCTACTGACCTCCAATGCTTTCTGGTACACTGCAGCAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR-3UTR GCA 90 bp | TGTCTCTTTTCCTCCCATCTAATCTGTGTCACAGGCTGCTTCCTGTGGACTCAAGTGCTTGCTGAGCTATaGCTGCCAGTGGGAACATCG | + |
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Preference number: 2 (lower is better) Translates to: CLFSSHLICVTGCFLWTQVLAEL*LPVGTS Trigger: CGATGTTCCCACTGGCAGGCATAGCTCAGCAAGCAC...TTGAGTCCACAGGAAGCAGCCTGTGACACAGATTAGATGGGAGGAAAAGAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR-3UTR CCA 90 bp | GCCAATGTACCAAAGGACAGCAAAGGGGACAGTGGTCCAAAAGAGACAGCTGTGCGAATGCTTCCAGTATaGTGCCCTGCAGTTTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: ANVPKDSKGDSGPKETAVRMLPV*CPAVSW Trigger: CCAAGAAACTGCAGGGCACCATACTGGAAGCATTCG...CACAGCTGTCTCTTTTGGACCACTGTCCCCTTTGCTGTCCTTTGGTACATTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR-3UTR CCA 90 bp | GGTGCCCGACAAACCCACTTGTCTCAGGTCTGCAGAGATGCAGATAGCATGGTGGTGTTGGACATTTATTaGGAGAGCAGGCAAAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: GARQTHLSQVCRDADSMVVLDIY*ESRQKG Trigger: CCCTTTTTGCCTGCTCTCCCAATAAATGTCCAACAC...CACCATGCTATCTGCATCTCTGCAGACCTGAGACAAGTGGGTTTGTCGGGCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| 3UTR CAA 90 bp | AATCTGTGTCACAGGCTGCTTCCTGTGGACTCAATGAAAAGGCCATaGCTGACAGCCTGCTCAAATAAGGTACCAGGCAGAGAAACGGGA | + |
|
Preference number: 2 (lower is better) Translates to: NLCHRLLPVDSMKRP*LTACSNKVPGRETG Trigger: TCCCGTTTCTCTGCCTGGTACCTTATTTGAGCAGGCTGTCAGCAATGGCCTTTTCATTGAGTCCACAGGAAGCAGCCTGTGACACAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR-3UTR TCA 90 bp | GGCCCTGCTTGTGCCTCTAGGCTTTGTCCTAGTGACAAGCAGTCTGCAGGCTTCTGTCAACCTTCTCCATaGCATTTAGTTTGGTTATCC | + |
|
Preference number: 2 (lower is better) Translates to: GPACASRLCPSDKQSAGFCQPSP*HLVWLS Trigger: GGATAACCAAACTAAATGTCATGGAGAAGGTTGACA...GAAGCCTGCAGACTGCTTGTCACTAGGACAAAGCCTAGAGGCACAAGCAGGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR-3UTR TCA 90 bp | AGCAGACATGAGCCCAAACAGAGTGAGCTTTGCAGTCTGCCAGTGTCACCTTGCTTTCCCAGATGTCCATaGACATGTGACCTTTGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: SRHEPKQSELCSLPVSPCFPRCP*TCDLCQ Trigger: CTGACAAAGGTCACATGTTCATGGACATCTGGGAAA...GCAAGGTGACACTGGCAGACTGCAAAGCTCACTCTGTTTGGGCTCATGTCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR-3UTR CCA 90 bp | AATTGCTGGCCTCGTTCAGTTAACAAATACTTGCCAACTTATGTCCTTAATCAGGCAGCCAGAGAAGCCTaGCTGAGCTTCCCCACCCCC | + |
|
Preference number: 2 (lower is better) Translates to: NCWPRSVNKYLPTYVLNQAAREA*LSFPTP Trigger: GGGGGTGGGGAAGCTCAGCCAGGCTTCTCTGGCTGC...CTGATTAAGGACATAAGTTGGCAAGTATTTGTTAACTGAACGAGGCCAGCAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR-3UTR TCA 90 bp | GATTGTACAAAACAAAGAGCAGAAACTGCTCAGTCAGGTTTTCCTCTGTATTTTCCAGAGAAGCCTGGCTaGGCTTCCCCACCCCCTAGC | + |
|
Preference number: 2 (lower is better) Translates to: DCTKQRAETAQSGFPLYFPEKPG*ASPPPS Trigger: GCTAGGGGGTGGGGAAGCTCAGCCAGGCTTCTCTGG...AAAATACAGAGGAAAACCTGACTGAGCAGTTTCTGCTCTTTGTTTTGTACAATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR-3UTR GCA 90 bp | CTCCCATCTAATCTGTGTCACAGGCTGCTTCCTGTGGACTCAATGAAAAGGCCAGGCAGGGATTTGGTTTaGCTTGTAGAGACTTGTGTA | + |
|
Preference number: 2 (lower is better) Translates to: LPSNLCHRLLPVDSMKRPGRDLV*LVETCV Trigger: TACACAAGTCTCTACAAGGCAAACCAAATCCCTGCC...TGGCCTTTTCATTGAGTCCACAGGAAGCAGCCTGTGACACAGATTAGATGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR-3UTR GCA 90 bp | CAATGTACCAAAGGACAGCAAAGGGGACAGTGGTCCAAAAGAGACAGCTGTGCAATGAAGCTCTGTGTCTaGCAAGCTCAGTATTTAGCA | + |
|
Preference number: 2 (lower is better) Translates to: QCTKGQQRGQWSKRDSCAMKLCV*QAQYLA Trigger: TGCTAAATACTGAGCTTGGCAGACACAGAGCTTCAT...TGCACAGCTGTCTCTTTTGGACCACTGTCCCCTTTGCTGTCCTTTGGTACATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR-3UTR CCA 90 bp | TCAATGAAAAGGCCATTGCTGACAGCCTGCTCAAATAAGGTACCAGGCAGAGAAGTGAGTTTTCTAGAATaGCTTGTGCATCTCGCACGG | + |
|
Preference number: 2 (lower is better) Translates to: SMKRPLLTACSNKVPGREVSFLE*LVHLAR Trigger: CCGTGCGAGATGCACAAGCCATTCTAGAAAACTCAC...TTCTCTGCCTGGTACCTTATTTGAGCAGGCTGTCAGCAATGGCCTTTTCATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR-3UTR CCA 90 bp | AATTGCTGGCCTCGTTCAGTTAACAAATACTTGCCAACTTATGTCCTTAATCAGCCACAGCTCAGAACCTaGCAGCAGCAGGAAAGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: NCWPRSVNKYLPTYVLNQPQLRT*QQQESP Trigger: GGGACTTTCCTGCTGCTGCCAGGTTCTGAGCTGTGG...CTGATTAAGGACATAAGTTGGCAAGTATTTGTTAACTGAACGAGGCCAGCAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR-3UTR TCA 90 bp | AATTGCTGGCCTCGTTCAGTTAACAAATACTTGCCAACTTATGTCCTTAATCAGCTTACCCACCTTCCCTaGAGGTGGCATGTGCTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: NCWPRSVNKYLPTYVLNQLTHLP*RWHVLA Trigger: AGCAAGCACATGCCACCTTCAGGGAAGGTGGGTAAG...CTGATTAAGGACATAAGTTGGCAAGTATTTGTTAACTGAACGAGGCCAGCAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CAA 90 bp | AGCCATTGGGTCTCAGGGCAGGGATTTGGTTTGCCTTGTAGAGACTaGTGTATTTCCTTAATTGCTGGCCTCGTTCAGTTAACAAATACT | + |
|
Preference number: 2 (lower is better) Translates to: SHWVSGQGFGLPCRD*CISLIAGLVQLTNT Trigger: AGTATTTGTTAACTGAACGAGGCCAGCAATTAAGGAAATACACAAGTCTCTACAAGGCAAACCAAATCCCTGCCCTGAGACCCAATGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR-3UTR TCA 90 bp | TTTATTGCCATTGAGAATAATGCCTTAACCGGATCTGGGCCTTTGACAGAAGATGTGACCTTTGTCAGATaGAGCTCTGTGTCTGCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: FIAIENNALTGSGPLTEDVTFVR*SSVSAK Trigger: CTTGGCAGACACAGAGCTTCATCTGACAAAGGTCAC...ATCTTCTGTCAAAGGCCCAGATCCGGTTAAGGCATTATTCTCAATGGCAATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR-3UTR GCA 90 bp | CAAGTGTCAACCTTCTCCATGACATTTAGTTTGGTTATCCCCACCCACCCCACAACCCAGAGTTTTACATaGATCCTCTCCTTTAATAGC | + |
|
Preference number: 2 (lower is better) Translates to: QVSTFSMTFSLVIPTHPTTQSFT*ILSFNS Trigger: GCTATTAAAGGAGAGGATGCATGTAAAACTCTGGGT...TGTGGGGTGGGTGGGGATAACCAAACTAAATGTCATGGAGAAGGTTGACACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR-3UTR CCA 90 bp | GATTGTACAAAACAAAGAGCAGAAACTGCTCAGTCAGGTTTTCCTCTGTATTTTACTTTCGCTGTTTGGTaGTCTGGCTCCTGCTGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: DCTKQRAETAQSGFPLYFTFAVW*SGSCWH Trigger: ATGCCAGCAGGAGCCAGACCACCAAACAGCGAAAGT...AAAATACAGAGGAAAACCTGACTGAGCAGTTTCTGCTCTTTGTTTTGTACAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR-3UTR CCA 90 bp | GATTGTACAAAACAAAGAGCAGAAACTGCTCAGTCAGGTTTTCCTCTGTATTTTTCTGCCTGGAGACTGTaGGAGCACTCTAGTAAGATG | + |
|
Preference number: 2 (lower is better) Translates to: DCTKQRAETAQSGFPLYFSAWRL*EHSSKM Trigger: CATCTTACTAGAGTGCTCCCACAGTCTCCAGGCAGA...AAAATACAGAGGAAAACCTGACTGAGCAGTTTCTGCTCTTTGTTTTGTACAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR-3UTR TCA 90 bp | TTTATTGCCATTGAGAATAATGCCTTAACCGGATCTGGGCCTTTGACAGAAGATATGTCCATGAACATGTaGCCTTTGTCAGATGAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: FIAIENNALTGSGPLTEDMSMNM*PLSDEA Trigger: AGCTTCATCTGACAAAGGTCACATGTTCATGGACAT...ATCTTCTGTCAAAGGCCCAGATCCGGTTAAGGCATTATTCTCAATGGCAATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR-3UTR GCA 90 bp | GATTGTACAAAACAAAGAGCAGAAACTGCTCAGTCAGGTTTTCCTCTGTATTTTCACTTGTCTCAGGTCTaGAGAGATGCAGATAGCATG | + |
|
Preference number: 2 (lower is better) Translates to: DCTKQRAETAQSGFPLYFHLSQV*RDADSM Trigger: CATGCTATCTGCATCTCTGCAGACCTGAGACAAGTG...AAAATACAGAGGAAAACCTGACTGAGCAGTTTCTGCTCTTTGTTTTGTACAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CAA 90 bp | CTTGTGTATTTCCTTAATTGCTGGCCTCGTTCAGTTAACAAATACTaGCCAACTTATGTCCTTAATCAGTCTCAAGAAAACATAAACCCT | + |
|
Preference number: 2 (lower is better) Translates to: LVYFLNCWPRSVNKY*PTYVLNQSQENINP Trigger: AGGGTTTATGTTTTCTTGAGACTGATTAAGGACATAAGTTGGCAAGTATTTGTTAACTGAACGAGGCCAGCAATTAAGGAAATACACAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR GCA 72 bp | AGGAGGAGCCGGGGCTCTCACACCTCCCTCCCCTTGTaGTGCTGGCATCCCGGCCTACAGCAGAGCCTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: RRSRGSHTSLPL*CWHPGLQQSLK Trigger: CTTGAGGCTCTGCTGTAGGCCGGGATGCCAGCAGCACAAGGGGAGGGAGGTGTGAGAGCCCCGGCTCCTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CCA 72 bp | AGCCGGGGCTCTCACACCTCCCTCCCCTTGTGCTGCTaGCATCCCGGCCTACAGCAGAGCCTCAAGCATGGC | + |
|
Preference number: 3 (lower is better) Translates to: SRGSHTSLPLCC*HPGLQQSLKHG Trigger: GCCATGCTTGAGGCTCTGCTGTAGGCCGGGATGCCAGCAGCACAAGGGGAGGGAGGTGTGAGAGCCCCGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CCA 72 bp | CTGATTCTGGGTGAGGCACTGCCACAGCTCAGAACCTaGCAGCAGCAGGAAAGTCCCTCAGCAGTCCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LILGEALPQLRT*QQQESPSAVPR Trigger: CCTGGGGACTGCTGAGGGACTTTCCTGCTGCTGCCAGGTTCTGAGCTGTGGCAGTGCCTCACCCAGAATCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR GCA 72 bp | CTGAGTATGCCGGGTGGTGGGAAAGAGGAGCCCCCTTaGTGTGAGGCTCCTGCTGCAGTGTACCAGAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LSMPGGGKEEPP*CEAPAAVYQKA Trigger: TGCTTTCTGGTACACTGCAGCAGGAGCCTCACAGCAAGGGGGCTCCTCTTTCCCACCACCCGGCATACTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CCA 72 bp | AGCAGCAGGAAAGTCCCTCAGCAGTCCCCAGGGCCTTaGAGGCTATGCCTGCCACACGTGCCTGAATGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: SSRKVPQQSPGP*RLCLPHVPECC Trigger: ACAACATTCAGGCACGTGTGGCAGGCATAGCCTCCAAGGCCCTGGGGACTGCTGAGGGACTTTCCTGCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR TCA 72 bp | TACACCAGGCCACGACTTGTGTACCCTGATTCTGGGTaGGGCACTGCCACAGCTCAGAACCTGGCAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: YTRPRLVYPDSG*GTATAQNLAAA Trigger: TGCTGCTGCCAGGTTCTGAGCTGTGGCAGTGCCTCACCCAGAATCAGGGTACACAAGTCGTGGCCTGGTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR GCA 72 bp | TCCCTCAGCAGTCCCCAGGGCCTTGGAGGCTATGCCTaGCACACGTGCCTGAATGTTGTTCAGTGGAACTTC | + |
|
Preference number: 3 (lower is better) Translates to: SLSSPQGLGGYA*HTCLNVVQWNF Trigger: GAAGTTCCACTGAACAACATTCAGGCACGTGTGGCAGGCATAGCCTCCAAGGCCCTGGGGACTGCTGAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGGCACTGCCACAGCTCAGAACCTGGCAGCAGCAGGAAAGTCCCTCAGCAGGTGCCCTGCAGTTTCTaGGACTGTAGCACTTTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: VRHCHSSEPGSSRKVPQQVPCSF*DCSTFH Trigger: ATGGAAAGTGCTACAGTCCAAGAAACTGCAGGGCAC...CTGCTGAGGGACTTTCCTGCTGCTGCCAGGTTCTGAGCTGTGGCAGTGCCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTGGGAAAGAGGAGCCCCCTTGCTGTGAGGCTCCTGCTGCAGTGTACCAGAGGGCAGGGATTTGGTTaGCCTTGTAGAGACTTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: VVGKRSPLAVRLLLQCTRGQGFG*PCRDLC Trigger: ACACAAGTCTCTACAAGGCAAACCAAATCCCTGCCC...TCTGGTACACTGCAGCAGGAGCCTCACAGCAAGGGGGCTCCTCTTTCCCACCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR TCA 72 bp | TCTAGAATGGCTTGTGCATCTCGCACGGTCTGGCAGTaGGCAGCCAGGGAGACTCTCATTTCGGGTTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SRMACASRTVWQ*AARETLISGSP Trigger: GGGAGAACCCGAAATGAGAGTCTCCCTGGCTGCTCACTGCCAGACCGTGCGAGATGCACAAGCCATTCTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR TCA 72 bp | GCTTACCCACCTTCCCTGAAGGTGGCATGTGCTTGCTaGGCTATGCCTGCCAGTGGGAACATCGTCAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: AYPPSLKVACAC*AMPASGNIVST Trigger: TGTGCTGACGATGTTCCCACTGGCAGGCATAGCTCAGCAAGCACATGCCACCTTCAGGGAAGGTGGGTAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR GCA 72 bp | AAAGTCCCTCAGCAGTCCCCAGGGCCTTGGAGGCTATaGCTGCCACACGTGCCTGAATGTTGTTCAGTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: KVPQQSPGPWRL*LPHVPECCSVE Trigger: TTCCACTGAACAACATTCAGGCACGTGTGGCAGGCATAGCCTCCAAGGCCCTGGGGACTGCTGAGGGACTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR GCA 72 bp | CTTGTGGTCAGTGGCAGTTGCTCATCTGTCCAAGAGTaGCAGCTGAGTATGCCGGGTGGTGGGAAAGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LVVSGSCSSVQE*QLSMPGGGKEE Trigger: CTCCTCTTTCCCACCACCCGGCATACTCAGCTGGCACTCTTGGACAGATGAGCAACTGCCACTGACCACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR GCA 72 bp | AGCCTCAAGCATGGCTGGTGTGAGGCAGCACCTCTGTaGCAATGTACCAAAGGACAGCAAAGGGGACAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SLKHGWCEAAPL*QCTKGQQRGQW Trigger: CCACTGTCCCCTTTGCTGTCCTTTGGTACATTGGCACAGAGGTGCTGCCTCACACCAGCCATGCTTGAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CCA 72 bp | CAGTGGAACTTCACACACTTTCGCTGTTTGGTGGTCTaGCTCCTGCTGGCATGCGGTTACCTCCAAGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: QWNFTHFRCLVV*LLLACGYLQGL Trigger: GAGCCCTTGGAGGTAACCGCATGCCAGCAGGAGCCAGACCACCAAACAGCGAAAGTGTGTGAAGTTCCACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CCA 72 bp | GCTCTGCCTGGAGACTGTGGGAGCACTCTAGTAAGATaGTGCCCGACAAACCCACTTGTCTCAGGTCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ALPGDCGSTLVR*CPTNPLVSGLQ Trigger: CTGCAGACCTGAGACAAGTGGGTTTGTCGGGCACCATCTTACTAGAGTGCTCCCACAGTCTCCAGGCAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR TCA 72 bp | CCCAGGGCCTTGGAGGCTATGCCTGCCACACGTGCCTaGATGTTGTTCAGTGGAACTTCACACACTTTCGCT | + |
|
Preference number: 3 (lower is better) Translates to: PRALEAMPATRA*MLFSGTSHTFA Trigger: AGCGAAAGTGTGTGAAGTTCCACTGAACAACATTCAGGCACGTGTGGCAGGCATAGCCTCCAAGGCCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CCA 72 bp | GAAGGTGGCATGTGCTTGCTGAGCTATGCCTGCCAGTaGGAACATCGTCAGCACAGTTGGAACACTCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: EGGMCLLSYACQ*EHRQHSWNTPL Trigger: CAGTGGAGTGTTCCAACTGTGCTGACGATGTTCCCACTGGCAGGCATAGCTCAGCAAGCACATGCCACCTTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CCA 72 bp | AGACAGAGCCCCACTTGGTGTTTAACCCAGCCCTTGTaGTCAGTGGCAGTTGCTCATCTGTCCAAGAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: RQSPTWCLTQPL*SVAVAHLSKSA Trigger: GGCACTCTTGGACAGATGAGCAACTGCCACTGACCACAAGGGCTGGGTTAAACACCAAGTGGGGCTCTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR TCA 72 bp | TCTGGTTCTCTACTCCTCTCCCTGCTTCAGCCATGCTaGTCTCACTGCTGTCGCACATCCCTCGAATGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SGSLLLSLLQPC*SHCCRTSLECF Trigger: GAAGCATTCGAGGGATGTGCGACAGCAGTGAGATCAGCATGGCTGAAGCAGGGAGAGGAGTAGAGAACCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR GCA 72 bp | CACTTTCGCTGTTTGGTGGTCTGGCTCCTGCTGGCATaGGGTTACCTCCAAGGGCTCATTTTATCCTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: HFRCLVVWLLLA*GYLQGLILSSS Trigger: TGAGGAGGATAAAATGAGCCCTTGGAGGTAACCGCATGCCAGCAGGAGCCAGACCACCAAACAGCGAAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR GCA 72 bp | AGTCCCCAGGGCCTTGGAGGCTATGCCTGCCACACGTaGCTGAATGTTGTTCAGTGGAACTTCACACACTTT | + |
|
Preference number: 3 (lower is better) Translates to: SPQGLGGYACHT*LNVVQWNFTHF Trigger: AAAGTGTGTGAAGTTCCACTGAACAACATTCAGGCACGTGTGGCAGGCATAGCCTCCAAGGCCCTGGGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CCA 72 bp | GCTGTGAGGCTCCTGCTGCAGTGTACCAGAAAGCATTaGAGGTCAGTAGGCAGCTTGTCTCTTTTCCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: AVRLLLQCTRKH*RSVGSLSLFLP Trigger: TGGGAGGAAAAGAGACAAGCTGCCTACTGACCTCCAATGCTTTCTGGTACACTGCAGCAGGAGCCTCACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR-3UTR CAA 90 bp | GGTGCCCGACAAACCCACTTGTCTCAGGTCTGCAGAGATGCAGATAGCATGGTGTCTCAGGGCAGGGATTaGGTTTGCCTTGTAGAGACT | + |
|
Preference number: 3 (lower is better) Translates to: GARQTHLSQVCRDADSMVSQGRD*VCLVET Trigger: AGTCTCTACAAGGCAAACCAAATCCCTGCCCTGAGA...CACCATGCTATCTGCATCTCTGCAGACCTGAGACAAGTGGGTTTGTCGGGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR TCA 72 bp | AGTCTTGATTATAGATGGCAGCCAGAGAAGCCTGGCTaGGCTTCCCCACCCCCTAGCTGTGCTCATTTAACC | + |
|
Preference number: 3 (lower is better) Translates to: SLDYRWQPEKPG*ASPPPSCAHLT Trigger: GGTTAAATGAGCACAGCTAGGGGGTGGGGAAGCTCAGCCAGGCTTCTCTGGCTGCCATCTATAATCAAGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR GCA 72 bp | GCAGACATGAGCCCAAACAGAGTGAGCTTTGCAGTCTaGCAGTGTCACCTTGCTCTCTGGGCCATTCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ADMSPNRVSFAV*QCHLALWAIQK Trigger: TTTCTGAATGGCCCAGAGAGCAAGGTGACACTGGCAGACTGCAAAGCTCACTCTGTTTGGGCTCATGTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CCA 72 bp | ATCAGTCATGCAGGGACAGGAGTGAGTTTTCTAGAATaGCTTGTGCATCTCGCACGGTCTGGCAGTGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ISHAGTGVSFLE*LVHLARSGSEQ Trigger: CTGCTCACTGCCAGACCGTGCGAGATGCACAAGCCATTCTAGAAAACTCACTCCTGTCCCTGCATGACTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CCA 72 bp | TGCCCTGCAGTTTCTTGGACTGTAGCACTTTCCATATaGCTTGCTTGGCTCCCTGGCTGGTTTCATGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: CPAVSWTVALSI*LAWLPGWFHGS Trigger: TGAGCCATGAAACCAGCCAGGGAGCCAAGCAAGCCATATGGAAAGTGCTACAGTCCAAGAAACTGCAGGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CCA 72 bp | TCACACACTTTCGCTGTTTGGTGGTCTGGCTCCTGCTaGCATGCGGTTACCTCCAAGGGCTCATTTTATCCT | + |
|
Preference number: 3 (lower is better) Translates to: SHTFAVWWSGSC*HAVTSKGSFYP Trigger: AGGATAAAATGAGCCCTTGGAGGTAACCGCATGCCAGCAGGAGCCAGACCACCAAACAGCGAAAGTGTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CCA 72 bp | TTGTTCAGTGGAACTTCACACACTTTCGCTGTTTGGTaGTCTGGCTCCTGCTGGCATGCGGTTACCTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LFSGTSHTFAVW*SGSCWHAVTSK Trigger: CTTGGAGGTAACCGCATGCCAGCAGGAGCCAGACCACCAAACAGCGAAAGTGTGTGAAGTTCCACTGAACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCATCTAATCTGTGTCACAGGCTGCTTCCTGTGGACTCAATGAAAAGGCCAGCTCATTTAACCTGCTaGCCCATCCCCTGCCTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LPSNLCHRLLPVDSMKRPAHLTC*PIPCLE Trigger: CTCTAGGCAGGGGATGGGCAAGCAGGTTAAATGAGC...TGGCCTTTTCATTGAGTCCACAGGAAGCAGCCTGTGACACAGATTAGATGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGACATGAGCCCAAACAGAGTGAGCTTTGCAGTCTGCCAGTGTCACCTTGCCCTTTGACAGAAGATTaGCTCTGCCTGGAGACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SRHEPKQSELCSLPVSPCPLTED*LCLETV Trigger: CACAGTCTCCAGGCAGAGCAAATCTTCTGTCAAAGG...GCAAGGTGACACTGGCAGACTGCAAAGCTCACTCTGTTTGGGCTCATGTCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR TCA 72 bp | ACTTGTCTCAGGTCTGCAGAGATGCAGATAGCATGGTaGTGCTGCCTCTTAGCTGGAAACCTGCATGCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: TCLRSAEMQIAW*CCLLAGNLHAC Trigger: GCAAGCATGCAGGTTTCCAGCTAAGAGGCAGCATCACCATGCTATCTGCATCTCTGCAGACCTGAGACAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR TCA 72 bp | CAGCTGTGCACATGCATCAGTGAGTGGATGGGTGGCTaGCAGTGTACATTCATACAAGGGTTAGTGTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: QLCTCISEWMGG*QCTFIQGLVCG Trigger: TCCACACACTAACCCTTGTATGAATGTACACTGTCAGCCACCCATCCACTCACTGATGCATGTGCACAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CCA 72 bp | GTTTCTTGGACTGTAGCACTTTCCATATGGCTTGCTTaGCTCCCTGGCTGGTTTCATGGCTCAAGTGTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: VSWTVALSIWLA*LPGWFHGSSVN Trigger: GTTGACACTTGAGCCATGAAACCAGCCAGGGAGCCAAGCAAGCCATATGGAAAGTGCTACAGTCCAAGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CCA 72 bp | TTGGACATTTATTGGGAGAGCAGGCAAAAAGGGGCCTaGGGACCATTTGGTCTTCCCTTTACAGATCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LDIYWESRQKGA*GPFGLPFTDLG Trigger: TCCCAGATCTGTAAAGGGAAGACCAAATGGTCCCCAGGCCCCTTTTTGCCTGCTCTCCCAATAAATGTCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CCA 72 bp | AGACTAGTGTTCCTTATCTGTAGAGCAGCCAGCCATTaGGTCTCAGGGCAGGGATTTGGTTTGCCTTGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: RLVFLICRAASH*VSGQGFGLPCR Trigger: TCTACAAGGCAAACCAAATCCCTGCCCTGAGACCCAATGGCTGGCTGCTCTACAGATAAGGAACACTAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CCA 72 bp | GCCAGTGTCACCTTGCTCTCTGGGCCATTCAGAAACTaGGGACAGATTTCTTCTGAAAAGGATACCTACCGA | + |
|
Preference number: 3 (lower is better) Translates to: ASVTLLSGPFRN*GQISSEKDTYR Trigger: TCGGTAGGTATCCTTTTCAGAAGAAATCTGTCCCCAGTTTCTGAATGGCCCAGAGAGCAAGGTGACACTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR TCA 72 bp | TGGCTGGTTTCATGGCTCAAGTGTCAACCTTCTCCATaGCATTTAGTTTGGTTATCCCCACCCACCCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: WLVSWLKCQPSP*HLVWLSPPTPQ Trigger: TTGTGGGGTGGGTGGGGATAACCAAACTAAATGTCATGGAGAAGGTTGACACTTGAGCCATGAAACCAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR-3UTR CAA 90 bp | AGCCATTGGGTCTCAGGGCAGGGATTTGGTTTGCCTTGTAGAGACTTGTGTATTTGTGTTGGACATTTATaGGGAGAGCAGGCAAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SHWVSGQGFGLPCRDLCICVGHL*GEQAKR Trigger: CCTTTTTGCCTGCTCTCCCAATAAATGTCCAACACA...AATACACAAGTCTCTACAAGGCAAACCAAATCCCTGCCCTGAGACCCAATGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR TCA 72 bp | TCTACCTTCAAAAACCAAGCTTTTCCCAGATGTCCATaGACATGTGACCTTTGTCAGATGAAGCTCTGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: STFKNQAFPRCP*TCDLCQMKLCV Trigger: GACACAGAGCTTCATCTGACAAAGGTCACATGTTCATGGACATCTGGGAAAAGCTTGGTTTTTGAAGGTAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR GCA 72 bp | GTGAGAAACAGGAGAAATAATAGTAACTATCAGTCATaGAGGGACAGGAGTGAGTTTTCTAGAATGGCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: VRNRRNNSNYQS*RDRSEFSRMAC Trigger: ACAAGCCATTCTAGAAAACTCACTCCTGTCCCTGCATGACTGATAGTTACTATTATTTCTCCTGTTTCTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CCA 72 bp | CTTGTTTTCCATTTGGGCAATAAATTAAGGAACCTGTaGATAGGGATTGGGAAACCATGTCACAGAAATCTG | + |
|
Preference number: 3 (lower is better) Translates to: LVFHLGNKLRNL*IGIGKPCHRNL Trigger: CAGATTTCTGTGACATGGTTTCCCAATCCCTATCCACAGGTTCCTTAATTTATTGCCCAAATGGAAAACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR GCA 72 bp | TCCTTAATTGCTGGCCTCGTTCAGTTAACAAATACTTaGCAACTTATGTCCTTAATCAGTCTCAAGAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: SLIAGLVQLTNT*QLMSLISLKKT Trigger: TGTTTTCTTGAGACTGATTAAGGACATAAGTTGGCAAGTATTTGTTAACTGAACGAGGCCAGCAATTAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CAA 72 bp | CCGAGGAGGAGCCGGGGCTCTCACACCTCCCTCCCCTaGTGCTGCTGGCATCCCGGCCTACAGCAGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PRRSRGSHTSLP*CCWHPGLQQSL Trigger: GAGGCTCTGCTGTAGGCCGGGATGCCAGCAGCACAAGGGGAGGGAGGTGTGAGAGCCCCGGCTCCTCCTCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| CDS-3UTR CCA 90 bp | GGCAGTGAGCAGCCAGGGAGACTCTCATTTCGGGTTCTCCCCTCAGCCATTCGCGCAGGGGCCAGAGGGTaGGGTCCTCAAACACATCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSEQPGRLSFRVLPSAIRAGARG*GPQTHL Trigger: GAGATGTGTTTGAGGACCCCACCCTCTGGCCCCTGC...GCGAATGGCTGAGGGGAGAACCCGAAATGAGAGTCTCCCTGGCTGCTCACTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| CDS-3UTR CCA 90 bp | CATCCCGGCCTACAGCAGAGCCTCAAGCATGGCTGGTGTGAGGCAGCACCTCTGAGCTCTGCGAGAGAATaGAAGTGCAGCAGGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HPGLQQSLKHGWCEAAPLSSARE*KCSRGQ Trigger: CTGGCCCCTGCTGCACTTCCATTCTCTCGCAGAGCT...CAGAGGTGCTGCCTCACACCAGCCATGCTTGAGGCTCTGCTGTAGGCCGGGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| CDS-3UTR TCA 90 bp | CAGCACAGTTGGAACACTCCACTGGGAGCTTTCCCAAAGATTAGAAGGCATTACGCAGGCGCGGGCAGCTaGGCAGCAAGCGCGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QHSWNTPLGAFPKIRRHYAGAGS*AASAPG Trigger: GCCTGGCGCGCTTGCTGCTCAGCTGCCCGCGCCTGC...GTAATGCCTTCTAATCTTTGGGAAAGCTCCCAGTGGAGTGTTCCAACTGTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| CDS-3UTR CCA 90 bp | AGCAGACATGAGCCCAAACAGAGTGAGCTTTGCAGTCTGCCAGTGTCACCTTGCCAGTCGTCCGTGACGTaGCCGCAGCCCGACAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRHEPKQSELCSLPVSPCQSSVT*PQPDSV Trigger: CACGCTGTCGGGCTGCGGCCACGTCACGGACGACTG...GCAAGGTGACACTGGCAGACTGCAAAGCTCACTCTGTTTGGGCTCATGTCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| CDS-3UTR GCA 90 bp | AGTCAGCGCGCCGCGACGGGGCAGACGTTTAAAGAGAAACCCAGAGTTTTACATCGGCAGAAGTCCACGTaGAGAGTCTGCAGCGCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SQRAATGQTFKEKPRVLHRQKST*RVCSAR Trigger: GCGCGCGCTGCAGACTCTGCACGTGGACTTCTGCCG...ATGTAAAACTCTGGGTTTCTCTTTAAACGTCTGCCCCGTCGCGGCGCGCTGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| CDS-3UTR TCA 90 bp | AGCCATTGGGTCTCAGGGCAGGGATTTGGTTTGCCTTGTAGAGACTTGTGTATTCGCAGCCCGACAGCGTaGCGGACGTCAGGTTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SHWVSGQGFGLPCRDLCIRSPTA*RTSGWG Trigger: GCCCCAACCTGACGTCCGTCACGCTGTCGGGCTGCG...AATACACAAGTCTCTACAAGGCAAACCAAATCCCTGCCCTGAGACCCAATGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| CDS-3UTR TCA 90 bp | AGCCATTGGGTCTCAGGGCAGGGATTTGGTTTGCCTTGTAGAGACTTGTGTATTCCAGGCAGTCGTCCGTaGCGTGGCCGCAGCCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: SHWVSGQGFGLPCRDLCIPGSRP*RGRSPT Trigger: TGTCGGGCTGCGGCCACGTCACGGACGACTGCCTGG...AATACACAAGTCTCTACAAGGCAAACCAAATCCCTGCCCTGAGACCCAATGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| CDS-3UTR GCA 90 bp | CAAGTGTCAACCTTCTCCATGACATTTAGTTTGGTTATCCCCACCCACCCCACATCCACGTGCAGAGTCTaGAGCGCGCGCCCGTGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: QVSTFSMTFSLVIPTHPTSTCRV*SARPCA Trigger: CGCGCACGGGCGCGCGCTGCAGACTCTGCACGTGGA...TGTGGGGTGGGTGGGGATAACCAAACTAAATGTCATGGAGAAGGTTGACACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| CDS-3UTR GCA 90 bp | CTCCCATCTAATCTGTGTCACAGGCTGCTTCCTGTGGACTCAATGAAAAGGCCACGGCGGCGCTCACGTTaGGGCAGAAGTCCACGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPSNLCHRLLPVDSMKRPRRRSR*GRSPRA Trigger: TGCACGTGGACTTCTGCCGCAACGTGAGCGCCGCCG...TGGCCTTTTCATTGAGTCCACAGGAAGCAGCCTGTGACACAGATTAGATGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CAA 72 bp | AGTGGCTTACCCACCTTCCCTGAAGGTGGCATGTGCTaGCTGAGCTATGCCTGCCAGTGGGAACATCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGLPTFPEGGMC*LSYACQWEHRQ Trigger: CTGACGATGTTCCCACTGGCAGGCATAGCTCAGCAAGCACATGCCACCTTCAGGGAAGGTGGGTAAGCCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| CDS-3UTR GCA 90 bp | AGCCATTGGGTCTCAGGGCAGGGATTTGGTTTGCCTTGTAGAGACTTGTGTATTAACAGATGGACAGGCTaGGCAGCGCAGGGCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SHWVSGQGFGLPCRDLCINRWTG*AAQGSA Trigger: GGCTGAGCCCTGCGCTGCGCAGCCTGTCCATCTGTT...AATACACAAGTCTCTACAAGGCAAACCAAATCCCTGCCCTGAGACCCAATGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CAA 72 bp | TGCTGTGAGGCTCCTGCTGCAGTGTACCAGAAAGCATaGGAGGTCAGTAGGCAGCTTGTCTCTTTTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CCEAPAAVYQKA*EVSRQLVSFPP Trigger: GGGAGGAAAAGAGACAAGCTGCCTACTGACCTCCAATGCTTTCTGGTACACTGCAGCAGGAGCCTCACAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CAA 72 bp | CTGAGACAGAGCCCCACTTGGTGTTTAACCCAGCCCTaGTGGTCAGTGGCAGTTGCTCATCTGTCCAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LRQSPTWCLTQP*WSVAVAHLSKS Trigger: ACTCTTGGACAGATGAGCAACTGCCACTGACCACAAGGGCTGGGTTAAACACCAAGTGGGGCTCTGTCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| CDS-3UTR GCA 90 bp | GCTTGGCTCCCTGGCTGGTTTCATGGCTCAAGTGTCAACCTTCTCCATGACATTTCGATGCTGCACACCTaGACACGGCTGGAATGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AWLPGWFHGSSVNLLHDISMLHT*TRLECQ Trigger: TTGGCATTCCAGCCGTGTGCAGGTGTGCAGCATCGA...AATGTCATGGAGAAGGTTGACACTTGAGCCATGAAACCAGCCAGGGAGCCAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| CDS-3UTR CCA 90 bp | CAAGTGTCAACCTTCTCCATGACATTTAGTTTGGTTATCCCCACCCACCCCACACTGCAGATGCTCCTCTaGAGGGCGCTCTTGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QVSTFSMTFSLVIPTHPTLQMLL*RALLSQ Trigger: CTGGCTCAAGAGCGCCCTCCAGAGGAGCATCTGCAG...TGTGGGGTGGGTGGGGATAACCAAACTAAATGTCATGGAGAAGGTTGACACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CAA 72 bp | TCCCAAAGATTAGAAGGCATTACACCAGGCCACGACTaGTGTACCCTGATTCTGGGTGAGGCACTGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SQRLEGITPGHD*CTLILGEALPQ Trigger: CTGTGGCAGTGCCTCACCCAGAATCAGGGTACACAAGTCGTGGCCTGGTGTAATGCCTTCTAATCTTTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| CDS-3UTR GCA 90 bp | CTCCCATCTAATCTGTGTCACAGGCTGCTTCCTGTGGACTCAATGAAAAGGCCATGCACACGGCTGGAATaGCAACAGATGGACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPSNLCHRLLPVDSMKRPCTRLE*QQMDRL Trigger: CAGCCTGTCCATCTGTTGGCATTCCAGCCGTGTGCA...TGGCCTTTTCATTGAGTCCACAGGAAGCAGCCTGTGACACAGATTAGATGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| CDS-3UTR CCA 90 bp | CAAGTGTCAACCTTCTCCATGACATTTAGTTTGGTTATCCCCACCCACCCCACATGGAATGCCAACAGATaGACAGGCTGCGCAGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QVSTFSMTFSLVIPTHPTWNANR*TGCAAQ Trigger: CTGCGCTGCGCAGCCTGTCCATCTGTTGGCATTCCA...TGTGGGGTGGGTGGGGATAACCAAACTAAATGTCATGGAGAAGGTTGACACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| CDS-3UTR GCA 90 bp | AGTCAGCGCGCCGCGACGGGGCAGACGTTTAAAGAGAAACCCAGAGTTTTACATCACCTGTTGCACACCTaGAGGAGGAAATCATTAACC | + |
|
Preference number: 4 (lower is better) Translates to: SQRAATGQTFKEKPRVLHHLLHT*RRKSLT Trigger: GGTTAATGATTTCCTCCTGCAGGTGTGCAACAGGTG...ATGTAAAACTCTGGGTTTCTCTTTAAACGTCTGCCCCGTCGCGGCGCGCTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CAA 72 bp | CACAGGCTGCTTCCTGTGGACTCAATGAAAAGGCCATaGCTGACAGCCTGCTCAAATAAGGTACCAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HRLLPVDSMKRP*LTACSNKVPGR Trigger: TCTGCCTGGTACCTTATTTGAGCAGGCTGTCAGCAATGGCCTTTTCATTGAGTCCACAGGAAGCAGCCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| CDS-3UTR GCA 90 bp | GCCAATGTACCAAAGGACAGCAAAGGGGACAGTGGTCCAAAAGAGACAGCTGTGGTCTTTCTTGAGCTCTaGGAGAGAATGGAAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ANVPKDSKGDSGPKETAVVFLEL*ERMEVQ Trigger: CTGCACTTCCATTCTCTCGCAGAGCTCAAGAAAGAC...CACAGCTGTCTCTTTTGGACCACTGTCCCCTTTGCTGTCCTTTGGTACATTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CAA 72 bp | GCCATTGAGAATAATGCCTTAACCGGATCTGGGCCTTaGACAGAAGATTTGCTCTGCCTGGAGACTGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AIENNALTGSGP*TEDLLCLETVG Trigger: TCCCACAGTCTCCAGGCAGAGCAAATCTTCTGTCAAAGGCCCAGATCCGGTTAAGGCATTATTCTCAATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| CDS-3UTR CCA 90 bp | TTTATTGCCATTGAGAATAATGCCTTAACCGGATCTGGGCCTTTGACAGAAGATACCAGGCTCTCGTGCTaGCTGCAGATGCTCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FIAIENNALTGSGPLTEDTRLSC*LQMLLW Trigger: CCAGAGGAGCATCTGCAGCCAGCACGAGAGCCTGGT...ATCTTCTGTCAAAGGCCCAGATCCGGTTAAGGCATTATTCTCAATGGCAATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CAA 72 bp | CAGTGTACCAGAAAGCATTGGAGGTCAGTAGGCAGCTaGTCTCTTTTCCTCCCATCTAATCTGTGTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QCTRKHWRSVGS*SLFLPSNLCHR Trigger: CCTGTGACACAGATTAGATGGGAGGAAAAGAGACAAGCTGCCTACTGACCTCCAATGCTTTCTGGTACACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| CDS-3UTR GCA 90 bp | AATTGCTGGCCTCGTTCAGTTAACAAATACTTGCCAACTTATGTCCTTAATCAGGGTTGGGGCACCTGTTaGACACCTGCAGGAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NCWPRSVNKYLPTYVLNQGWGTC*TPAGGN Trigger: ATTTCCTCCTGCAGGTGTGCAACAGGTGCCCCAACC...CTGATTAAGGACATAAGTTGGCAAGTATTTGTTAACTGAACGAGGCCAGCAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CAA 72 bp | GTCTCAGGGCAGGGATTTGGTTTGCCTTGTAGAGACTaGTGTATTTCCTTAATTGCTGGCCTCGTTCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: VSGQGFGLPCRD*CISLIAGLVQL Trigger: TAACTGAACGAGGCCAGCAATTAAGGAAATACACAAGTCTCTACAAGGCAAACCAAATCCCTGCCCTGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CAA 72 bp | TTCCTTAATTGCTGGCCTCGTTCAGTTAACAAATACTaGCCAACTTATGTCCTTAATCAGTCTCAAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: FLNCWPRSVNKY*PTYVLNQSQEN Trigger: GTTTTCTTGAGACTGATTAAGGACATAAGTTGGCAAGTATTTGTTAACTGAACGAGGCCAGCAATTAAGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| 3UTR CAA 72 bp | ATCCCTGATAAAGCTGAGAATCCAGGCATCATTTTATaGAAGTTTTCATATGGAATTGGTTCCCTAGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IPDKAENPGIIL*KFSYGIGSLEK Trigger: TTTTTCTAGGGAACCAATTCCATATGAAAACTTCAATAAAATGATGCCTGGATTCTCAGCTTTATCAGGGAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| CDS GCA 90 bp | AGGCGGAGCAGGCCGGCGGCGCTCACGTTGCGGCAGAAGTCCACGTaGAGAGTCTGCAGCGCGCGCCCGTGCGCGGCCACGGCCGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RRSRPAALTLRQKST*RVCSARPCAATAAS Trigger: GCTGGCGGCCGTGGCCGCGCACGGGCGCGCGCTGCAGACTCTGCACGTGGACTTCTGCCGCAACGTGAGCGCCGCCGGCCTGCTCCGCCT 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| CDS GCA 90 bp | AGGCCGGCGGCGCTCACGTTGCGGCAGAAGTCCACGTGCAGAGTCTaGAGCGCGCGCCCGTGCGCGGCCACGGCCGCCAGCGTGCGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RPAALTLRQKSTCRV*SARPCAATAASVRL Trigger: CAACCGCACGCTGGCGGCCGTGGCCGCGCACGGGCGCGCGCTGCAGACTCTGCACGTGGACTTCTGCCGCAACGTGAGCGCCGCCGGCCT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| CDS GCA 90 bp | ACGTTGCGGCAGAAGTCCACGTGCAGAGTCTGCAGCGCGCGCCCGTaGGCGGCCACGGCCGCCAGCGTGCGGTTGGTAACGCGCGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TLRQKSTCRVCSARP*AATAASVRLVTRAQ Trigger: CTGCGCGCGCGTTACCAACCGCACGCTGGCGGCCGTGGCCGCGCACGGGCGCGCGCTGCAGACTCTGCACGTGGACTTCTGCCGCAACGT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| CDS CCA 90 bp | CGCGGGCAGCTGAGCAGCAAGCGCGCCAGGCAGTCGTCCGTGACGTaGCCGCAGCCCGACAGCGTGACGGACGTCAGGTTGGGGCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: RGQLSSKRARQSSVT*PQPDSVTDVRLGHL Trigger: CAGGTGCCCCAACCTGACGTCCGTCACGCTGTCGGGCTGCGGCCACGTCACGGACGACTGCCTGGCGCGCTTGCTGCTCAGCTGCCCGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| CDS CCA 90 bp | TGCAGCAGGGGCCAGAGGGTGGGGTCCTCAAACACATCTCGGAGCTaGGAGCAAGTCCTGGAGAGGCTCCTCCGGCTGTCCTTGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CSRGQRVGSSNTSRS*EQVLERLLRLSLSR Trigger: CCTGGACAAGGACAGCCGGAGGAGCCTCTCCAGGACTTGCTCCCAGCTCCGAGATGTGTTTGAGGACCCCACCCTCTGGCCCCTGCTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
||
| CDS-3UTR CAA 90 bp | TGCTCATTTAACCTGCTTGCCCATCCCCTGCCTAGAGAGGGAGGCTGCTGGGTGGCCGCCAGCGTGCGGTaGGTAACGCGCGCGCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: CSFNLLAHPLPREGGCWVAASVR*VTRAQF Trigger: GAACTGCGCGCGCGTTACCAACCGCACGCTGGCGGC...CACCCAGCAGCCTCCCTCTCTAGGCAGGGGATGGGCAAGCAGGTTAAATGAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS-3UTR CAA 90 bp | GTGGTGGGAAAGAGGAGCCCCCTTGCTGTGAGGCTCCTGCTGCAGTGTACCAGACTCTGGAGGGCGCTCTaGAGCCAGTCCTCGATGCTG | + |
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Preference number: 5 (lower is better) Translates to: VVGKRSPLAVRLLLQCTRLWRAL*SQSSML Trigger: CAGCATCGAGGACTGGCTCAAGAGCGCCCTCCAGAG...TCTGGTACACTGCAGCAGGAGCCTCACAGCAAGGGGGCTCCTCTTTCCCACCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS-3UTR CAA 90 bp | GCAGGAAAGTCCCTCAGCAGTCCCCAGGGCCTTGGAGGCTATGCCTGCCACACGAGGTTGGGGCACCTGTaGCACACCTGCAGGAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: AGKSLSSPQGLGGYACHTRLGHL*HTCRRK Trigger: TTTCCTCCTGCAGGTGTGCAACAGGTGCCCCAACCT...CGTGTGGCAGGCATAGCCTCCAAGGCCCTGGGGACTGCTGAGGGACTTTCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS CCA 90 bp | AGAGGGTGGGGTCCTCAAACACATCTCGGAGCTGGGAGCAAGTCCTaGAGAGGCTCCTCCGGCTGTCCTTGTCCAGGAAGGAGAAGAGAC | + |
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Preference number: 5 (lower is better) Translates to: RGWGPQTHLGAGSKS*RGSSGCPCPGRRRD Trigger: GTCTCTTCTCCTTCCTGGACAAGGACAGCCGGAGGAGCCTCTCCAGGACTTGCTCCCAGCTCCGAGATGTGTTTGAGGACCCCACCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS GCA 90 bp | CACCTGTTGCACACCTGCAGGAGGAAATCATTAACCAGGCTCTCGTaGTGGCTGCAGATGCTCCTCTGGAGGGCGCTCTTGAGCCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: HLLHTCRRKSLTRLS*WLQMLLWRALLSQS Trigger: GGACTGGCTCAAGAGCGCCCTCCAGAGGAGCATCTGCAGCCAGCACGAGAGCCTGGTTAATGATTTCCTCCTGCAGGTGTGCAACAGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS CCA 90 bp | CTGTTGCACACCTGCAGGAGGAAATCATTAACCAGGCTCTCGTGCTaGCTGCAGATGCTCCTCTGGAGGGCGCTCTTGAGCCAGTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: LLHTCRRKSLTRLSC*LQMLLWRALLSQSS Trigger: CGAGGACTGGCTCAAGAGCGCCCTCCAGAGGAGCATCTGCAGCCAGCACGAGAGCCTGGTTAATGATTTCCTCCTGCAGGTGTGCAACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS GCA 90 bp | CTCAGCCGGAAGTTGTCTTTCTTGAGCTCTGCGAGAGAATGGAAGTaGAGCAGGGGCCAGAGGGTGGGGTCCTCAAACACATCTCGGAGC | + |
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Preference number: 5 (lower is better) Translates to: LSRKLSFLSSAREWK*SRGQRVGSSNTSRS Trigger: GCTCCGAGATGTGTTTGAGGACCCCACCCTCTGGCCCCTGCTGCACTTCCATTCTCTCGCAGAGCTCAAGAAAGACAACTTCCGGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS CCA 90 bp | AGGAAATCATTAACCAGGCTCTCGTGCTGGCTGCAGATGCTCCTCTaGAGGGCGCTCTTGAGCCAGTCCTCGATGCTGCACACCTGCACA | + |
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Preference number: 5 (lower is better) Translates to: RKSLTRLSCWLQMLL*RALLSQSSMLHTCT Trigger: TGTGCAGGTGTGCAGCATCGAGGACTGGCTCAAGAGCGCCCTCCAGAGGAGCATCTGCAGCCAGCACGAGAGCCTGGTTAATGATTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS-3UTR CAA 90 bp | TCCCAAAGATTAGAAGGCATTACACCAGGCCACGACTTGTGTACCCTGATTCTGCCGGCGGCGCTCACGTaGCGGCAGAAGTCCACGTGC | + |
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Preference number: 5 (lower is better) Translates to: SQRLEGITPGHDLCTLILPAALT*RQKSTC Trigger: GCACGTGGACTTCTGCCGCAACGTGAGCGCCGCCGG...CAGAATCAGGGTACACAAGTCGTGGCCTGGTGTAATGCCTTCTAATCTTTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS-3UTR CAA 90 bp | AGTCTGCCAGTGTCACCTTGCTCTCTGGGCCATTCAGAAACTGGGGACAGATTTGTGACGGACGTCAGGTaGGGGCACCTGTTGCACACC | + |
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Preference number: 5 (lower is better) Translates to: SLPVSPCSLGHSETGDRFVTDVR*GHLLHT Trigger: GGTGTGCAACAGGTGCCCCAACCTGACGTCCGTCAC...AAATCTGTCCCCAGTTTCTGAATGGCCCAGAGAGCAAGGTGACACTGGCAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS-3UTR CAA 90 bp | TCAATGAAAAGGCCATTGCTGACAGCCTGCTCAAATAAGGTACCAGGCAGAGAACTCCTCCGGCTGTCCTaGTCCAGGAAGGAGAAGAGA | + |
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Preference number: 5 (lower is better) Translates to: SMKRPLLTACSNKVPGRELLRLS*SRKEKR Trigger: TCTCTTCTCCTTCCTGGACAAGGACAGCCGGAGGAG...TTCTCTGCCTGGTACCTTATTTGAGCAGGCTGTCAGCAATGGCCTTTTCATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS-3UTR CAA 90 bp | GCCAATGTACCAAAGGACAGCAAAGGGGACAGTGGTCCAAAAGAGACAGCTGTGCGGAAGTTGTCTTTCTaGAGCTCTGCGAGAGAATGG | + |
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Preference number: 5 (lower is better) Translates to: ANVPKDSKGDSGPKETAVRKLSF*SSAREW Trigger: CCATTCTCTCGCAGAGCTCAAGAAAGACAACTTCCG...CACAGCTGTCTCTTTTGGACCACTGTCCCCTTTGCTGTCCTTTGGTACATTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS-3UTR CAA 90 bp | GGGGACCATTTGGTCTTCCCTTTACAGATCTGGGAAATTAGAGCCCAGTTTTCTGGGCTCAGCCGGAAGTaGTCTTTCTTGAGCTCTGCG | + |
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Preference number: 5 (lower is better) Translates to: GDHLVFPLQIWEIRAQFSGLSRK*SFLSSA Trigger: CGCAGAGCTCAAGAAAGACAACTTCCGGCTGAGCCC...AGAAAACTGGGCTCTAATTTCCCAGATCTGTAAAGGGAAGACCAAATGGTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS CAA 90 bp | GTCTGCAGCGCGCGCCCGTGCGCGGCCACGGCCGCCAGCGTGCGGTaGGTAACGCGCGCGCAGTTCTCGAGGCGCAGCGTACGCAGGCGC | + |
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Preference number: 6 (lower is better) Translates to: VCSARPCAATAASVR*VTRAQFSRRSVRRR Trigger: GCGCCTGCGTACGCTGCGCCTCGAGAACTGCGCGCGCGTTACCAACCGCACGCTGGCGGCCGTGGCCGCGCACGGGCGCGCGCTGCAGAC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS CAA 72 bp | GCGCGCCCGTGCGCGGCCACGGCCGCCAGCGTGCGGTaGGTAACGCGCGCGCAGTTCTCGAGGCGCAGCGTA | + |
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Preference number: 6 (lower is better) Translates to: ARPCAATAASVR*VTRAQFSRRSV Trigger: TACGCTGCGCCTCGAGAACTGCGCGCGCGTTACCAACCGCACGCTGGCGGCCGTGGCCGCGCACGGGCGCGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS GCA 72 bp | AGGCCGGCGGCGCTCACGTTGCGGCAGAAGTCCACGTaGAGAGTCTGCAGCGCGCGCCCGTGCGCGGCCACG | + |
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Preference number: 6 (lower is better) Translates to: RPAALTLRQKST*RVCSARPCAAT Trigger: CGTGGCCGCGCACGGGCGCGCGCTGCAGACTCTGCACGTGGACTTCTGCCGCAACGTGAGCGCCGCCGGCCT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS TCA 72 bp | GCTGATCGGGTATCATGGCCGCGCTGCGTTCGGCGCTaGGGCGCAGGTTCGGGCAGGCGGCGCGGAGGCGGA | + |
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Preference number: 6 (lower is better) Translates to: ADRVSWPRCVRR*GAGSGRRRGGG Trigger: TCCGCCTCCGCGCCGCCTGCCCGAACCTGCGCCTCAGCGCCGAACGCAGCGCGGCCATGATACCCGATCAGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS GCA 72 bp | CAGAAGTCCACGTGCAGAGTCTGCAGCGCGCGCCCGTaGGCGGCCACGGCCGCCAGCGTGCGGTTGGTAACG | + |
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Preference number: 6 (lower is better) Translates to: QKSTCRVCSARP*AATAASVRLVT Trigger: CGTTACCAACCGCACGCTGGCGGCCGTGGCCGCGCACGGGCGCGCGCTGCAGACTCTGCACGTGGACTTCTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS CCA 72 bp | CTGAGCAGCAAGCGCGCCAGGCAGTCGTCCGTGACGTaGCCGCAGCCCGACAGCGTGACGGACGTCAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: LSSKRARQSSVT*PQPDSVTDVRL Trigger: CAACCTGACGTCCGTCACGCTGTCGGGCTGCGGCCACGTCACGGACGACTGCCTGGCGCGCTTGCTGCTCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS TCA 72 bp | CGTGCTGGCTGCAGATGCTCCTCTGGAGGGCGCTCTTaGGCCAGTCCTCGATGCTGCACACCTGCACACGGC | + |
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Preference number: 6 (lower is better) Translates to: RAGCRCSSGGRS*ASPRCCTPAHG Trigger: GCCGTGTGCAGGTGTGCAGCATCGAGGACTGGCTCAAGAGCGCCCTCCAGAGGAGCATCTGCAGCCAGCACG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS CCA 72 bp | GGCCAGAGGGTGGGGTCCTCAAACACATCTCGGAGCTaGGAGCAAGTCCTGGAGAGGCTCCTCCGGCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: GQRVGSSNTSRS*EQVLERLLRLS Trigger: GGACAGCCGGAGGAGCCTCTCCAGGACTTGCTCCCAGCTCCGAGATGTGTTTGAGGACCCCACCCTCTGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS GCA 72 bp | AGGGCGCTCTTGAGCCAGTCCTCGATGCTGCACACCTaGACACGGCTGGAATGCCAACAGATGGACAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: RALLSQSSMLHT*TRLECQQMDRL Trigger: CAGCCTGTCCATCTGTTGGCATTCCAGCCGTGTGCAGGTGTGCAGCATCGAGGACTGGCTCAAGAGCGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS CCA 72 bp | GGTCCTCAAACACATCTCGGAGCTGGGAGCAAGTCCTaGAGAGGCTCCTCCGGCTGTCCTTGTCCAGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: GPQTHLGAGSKS*RGSSGCPCPGR Trigger: CCTTCCTGGACAAGGACAGCCGGAGGAGCCTCTCCAGGACTTGCTCCCAGCTCCGAGATGTGTTTGAGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS CCA 72 bp | TTAACCAGGCTCTCGTGCTGGCTGCAGATGCTCCTCTaGAGGGCGCTCTTGAGCCAGTCCTCGATGCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: LTRLSCWLQMLL*RALLSQSSMLH Trigger: GTGCAGCATCGAGGACTGGCTCAAGAGCGCCCTCCAGAGGAGCATCTGCAGCCAGCACGAGAGCCTGGTTAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS CAA 72 bp | CTGCGCAGCGCAGGGCTCAGCCGGAAGTTGTCTTTCTaGAGCTCTGCGAGAGAATGGAAGTGCAGCAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: LRSAGLSRKLSF*SSAREWKCSRG Trigger: GCCCCTGCTGCACTTCCATTCTCTCGCAGAGCTCAAGAAAGACAACTTCCGGCTGAGCCCTGCGCTGCGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS CAA 90 bp | TCTCGGAGCTGGGAGCAAGTCCTGGAGAGGCTCCTCCGGCTGTCCTaGTCCAGGAAGGAGAAGAGACACAGCAGACACTCCCGATTGAGC | + |
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Preference number: 6 (lower is better) Translates to: SRSWEQVLERLLRLS*SRKEKRHSRHSRLS Trigger: GCTCAATCGGGAGTGTCTGCTGTGTCTCTTCTCCTTCCTGGACAAGGACAGCCGGAGGAGCCTCTCCAGGACTTGCTCCCAGCTCCGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS CCA 72 bp | ACCTGCAGGAGGAAATCATTAACCAGGCTCTCGTGCTaGCTGCAGATGCTCCTCTGGAGGGCGCTCTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: TCRRKSLTRLSC*LQMLLWRALLS Trigger: GCTCAAGAGCGCCCTCCAGAGGAGCATCTGCAGCCAGCACGAGAGCCTGGTTAATGATTTCCTCCTGCAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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| CDS CAA 72 bp | ATGGACAGGCTGCGCAGCGCAGGGCTCAGCCGGAAGTaGTCTTTCTTGAGCTCTGCGAGAGAATGGAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: MDRLRSAGLSRK*SFLSSAREWKC Trigger: GCACTTCCATTCTCTCGCAGAGCTCAAGAAAGACAACTTCCGGCTGAGCCCTGCGCTGCGCAGCCTGTCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056890.10 |
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