Pregenerated sensors for FBXL21 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035509Ensembl transcript IDs: ENSMUST00000045428.7, ENSMUST00000121095.8, ENSMUST00000121871.8, ENSMUST00000124981.2, ENSMUST00000128668.8
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCACAGAGCAAGTCTGCACGGCACGCAGCCATGTGCTTCCCTTTCTaGATTGTCAGTGCTGGCCTTCCCACGGCAGCTGAGGAGCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: SQSKSARHAAMCFPF*IVSAGLPTAAEELR Trigger: CCTCAGCTCCTCAGCTGCCGTGGGAAGGCCAGCACTGACAATGCAGAAAGGGAAGCACATGGCTGCGTGCCGTGCAGACTTGCTCTGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
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| 3UTR TCA 90 bp | TCGGAGGCCCTGACAGTGGTCCGCCACACAGAGGATCCCATCAGATaGAACGTGAGGACAGCTACTCATTTTGAGGAGTCGAAGGGTGTC | + |
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Preference number: 1 (lower is better) Translates to: SEALTVVRHTEDPIR*NVRTATHFEESKGV Trigger: GACACCCTTCGACTCCTCAAAATGAGTAGCTGTCCTCACGTTTCATCTGATGGGATCCTCTGTGTGGCGGACCACTGTCAGGGCCTCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
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| 3UTR TCA 90 bp | CCTCGGGCAGTTAAGACCTATCCGGCCCAGGATGGCTCTGCTTACTaGACGTCCGAAATAAAGGTGAGTGACGGGGGTTTCCTCTTTGAA | + |
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Preference number: 1 (lower is better) Translates to: PRAVKTYPAQDGSAY*TSEIKVSDGGFLFE Trigger: TTCAAAGAGGAAACCCCCGTCACTCACCTTTATTTCGGACGTTCAGTAAGCAGAGCCATCCTGGGCCGGATAGGTCTTAACTGCCCGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
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| 3UTR CCA 90 bp | GTCACCATTGCAGAAGCTGGTTCTCTGTCTGGTCTTGCCATCAGATaGGTTCTGGGAATCAAACTCAGGTTCTTCGGCTTGGCGGGAAGC | + |
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Preference number: 1 (lower is better) Translates to: VTIAEAGSLSGLAIR*VLGIKLRFFGLAGS Trigger: GCTTCCCGCCAAGCCGAAGAACCTGAGTTTGATTCCCAGAACCCATCTGATGGCAAGACCAGACAGAGAACCAGCTTCTGCAATGGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
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| 3UTR CCA 90 bp | ACATCCGGAAACCACACTCTTCCCAGGTGCTTAGAGACTTCAGTGTaGACTTCATCTGGGGTGTACCTGTCGTCAGGGACCAGAACTTCC | + |
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Preference number: 1 (lower is better) Translates to: TSGNHTLPRCLETSV*TSSGVYLSSGTRTS Trigger: GGAAGTTCTGGTCCCTGACGACAGGTACACCCCAGATGAAGTCCACACTGAAGTCTCTAAGCACCTGGGAAGAGTGTGGTTTCCGGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
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| 3UTR TCA 90 bp | GGGTTTTCACTCACAACGTCTATCCGGAGATGTTCGAGGTTCACGTaGGTCTCGCTGGAGAGCGCAAGGAGAATTTCGTCGCTCAGAATG | + |
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Preference number: 1 (lower is better) Translates to: GFSLTTSIRRCSRFT*VSLESARRISSLRM Trigger: CATTCTGAGCGACGAAATTCTCCTTGCGCTCTCCAGCGAGACTCACGTGAACCTCGAACATCTCCGGATAGACGTTGTGAGTGAAAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
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| 3UTR GCA 90 bp | CCTAAGAACTGCATGGCACAGACTTTAATGCTCACAGAGCAAGTCTaGACGGCACGCAGCCATGTGCTTCCCTTTCTGCATTGTCAGTGC | + |
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Preference number: 1 (lower is better) Translates to: PKNCMAQTLMLTEQV*TARSHVLPFLHCQC Trigger: GCACTGACAATGCAGAAAGGGAAGCACATGGCTGCGTGCCGTGCAGACTTGCTCTGTGAGCATTAAAGTCTGTGCCATGCAGTTCTTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
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| 3UTR CCA 90 bp | CCACACTCTTCCCAGGTGCTTAGAGACTTCAGTGTGGACTTCATCTaGGGTGTACCTGTCGTCAGGGACCAGAACTTCCTCCATGATAGA | + |
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Preference number: 1 (lower is better) Translates to: PHSSQVLRDFSVDFI*GVPVVRDQNFLHDR Trigger: TCTATCATGGAGGAAGTTCTGGTCCCTGACGACAGGTACACCCCAGATGAAGTCCACACTGAAGTCTCTAAGCACCTGGGAAGAGTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
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| 3UTR GCA 90 bp | ATGTTCACATGCTTTTGCCCACACGTGGAGGTCAAAGGTCACCATTaGAGAAGCTGGTTCTCTGTCTGGTCTTGCCATCAGATGGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: MFTCFCPHVEVKGHH*RSWFSVWSCHQMGS Trigger: AGAACCCATCTGATGGCAAGACCAGACAGAGAACCAGCTTCTGCAATGGTGACCTTTGACCTCCACGTGTGGGCAAAAGCATGTGAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
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| 3UTR GCA 90 bp | ATCAGTGCGTCCCAGCTGCGTTTCTTAATAGAATGGAACTTGATCTaGCCCGGGTTTTCACTCACAACGTCTATCCGGAGATGTTCGAGG | + |
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Preference number: 1 (lower is better) Translates to: ISASQLRFLIEWNLI*PGFSLTTSIRRCSR Trigger: CCTCGAACATCTCCGGATAGACGTTGTGAGTGAAAACCCGGGGCAGATCAAGTTCCATTCTATTAAGAAACGCAGCTGGGACGCACTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
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| 3UTR GCA 90 bp | CTGACTTCACACTCACTCAGGCCCAAGGAGGTTAGATTTTTACAATaGTTGGCAATACGGATGAGTTCACTGTCCAGGGGCAGAAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: LTSHSLRPKEVRFLQ*LAIRMSSLSRGRRP Trigger: TGGCCTTCTGCCCCTGGACAGTGAACTCATCCGTATTGCCAAGCATTGTAAAAATCTAACCTCCTTGGGCCTGAGTGAGTGTGAAGTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
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| 3UTR CCA 90 bp | GATTGGTTCAGCTCAAACTCAAACTTCCTCCAAAGATCAGGGATGTaGAATACTTCATTCCATCTCCTGCACACGGACGAAGCCCGGGCT | + |
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Preference number: 1 (lower is better) Translates to: DWFSSNSNFLQRSGM*NTSFHLLHTDEARA Trigger: AGCCCGGGCTTCGTCCGTGTGCAGGAGATGGAATGAAGTATTCCACATCCCTGATCTTTGGAGGAAGTTTGAGTTTGAGCTGAACCAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124981.2 ENSMUST00000128668.8 |
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| 3UTR TCA 90 bp | CCCGGGCTCGATCTATTAAAGGAAGGTACTGAAAGATCTGTAATATaGCATGGTGAGGTAAAGTCCCCCAGTCCAGAAGGACAGAGAGCG | + |
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Preference number: 1 (lower is better) Translates to: PGLDLLKEGTERSVI*HGEVKSPSPEGQRA Trigger: CGCTCTCTGTCCTTCTGGACTGGGGGACTTTACCTCACCATGTCATATTACAGATCTTTCAGTACCTTCCTTTAATAGATCGAGCCCGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124981.2 ENSMUST00000128668.8 |
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| 3UTR GCA 90 bp | ACTTCCTCCAAAGATCAGGGATGTGGAATACTTCATTCCATCTCCTaGACACGGACGAAGCCCGGGCTCGATCTATTAAAGGAAGGTACT | + |
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Preference number: 1 (lower is better) Translates to: TSSKDQGCGILHSIS*TRTKPGLDLLKEGT Trigger: AGTACCTTCCTTTAATAGATCGAGCCCGGGCTTCGTCCGTGTGCAGGAGATGGAATGAAGTATTCCACATCCCTGATCTTTGGAGGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124981.2 ENSMUST00000128668.8 |
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| 3UTR CCA 90 bp | TCACAACGTCTATCCGGAGATGTTCGAGGTTCACGTGAGTCTCGCTaGAGAGCGCAAGGAGAATTTCGTCGCTCAGAATGTAGTAATTCA | + |
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Preference number: 1 (lower is better) Translates to: SQRLSGDVRGSRESR*RAQGEFRRSECSNS Trigger: TGAATTACTACATTCTGAGCGACGAAATTCTCCTTGCGCTCTCCAGCGAGACTCACGTGAACCTCGAACATCTCCGGATAGACGTTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
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| 3UTR GCA 90 bp | GATAGAACAATTTACCAGCTGAGAAAGGATATCACAGGCGGCTTCTaGCGACTCAGTACTGCTATCAACCTTAAAGCTGACATACTGAAG | + |
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Preference number: 1 (lower is better) Translates to: DRTIYQLRKDITGGF*RLSTAINLKADILK Trigger: CTTCAGTATGTCAGCTTTAAGGTTGATAGCAGTACTGAGTCGGCAGAAGCCGCCTGTGATATCCTTTCTCAGCTGGTAAATTGTTCTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
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| 3UTR CCA 90 bp | TTATTTGTGTATGTTTACACATGTTCACATGCTTTTGCCCACACGTaGAGGTCAAAGGTCACCATTGCAGAAGCTGGTTCTCTGTCTGGT | + |
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Preference number: 1 (lower is better) Translates to: LFVYVYTCSHAFAHT*RSKVTIAEAGSLSG Trigger: ACCAGACAGAGAACCAGCTTCTGCAATGGTGACCTTTGACCTCCACGTGTGGGCAAAAGCATGTGAACATGTGTAAACATACACAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
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| 3UTR TCA 90 bp | CTGTTGAATGAGGTCGGGATGAGTGGACTTGAAATAAGAAGTTGCTaGTTGGTTCAGCTCAAACTCAAACTTCCTCCAAAGATCAGGGAT | + |
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Preference number: 1 (lower is better) Translates to: LLNEVGMSGLEIRSC*LVQLKLKLPPKIRD Trigger: ATCCCTGATCTTTGGAGGAAGTTTGAGTTTGAGCTGAACCAATCAGCAACTTCTTATTTCAAGTCCACTCATCCCGACCTCATTCAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124981.2 ENSMUST00000128668.8 |
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| 3UTR TCA 90 bp | CAGCACTCTTACCTTGGGCACATTCATGAAACTTGGTTTGGCTGTTaGAATCAATCCCAAGGTCTGGATAGAACAATTTACCAGCTGAGA | + |
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Preference number: 1 (lower is better) Translates to: QHSYLGHIHETWFGC*NQSQGLDRTIYQLR Trigger: TCTCAGCTGGTAAATTGTTCTATCCAGACCTTGGGATTGATTTCAACAGCCAAACCAAGTTTCATGAATGTGCCCAAGGTAAGAGTGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
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| 3UTR GCA 90 bp | CCAGCTGAGAAAGGATATCACAGGCGGCTTCTGCCGACTCAGTACTaGTATCAACCTACAAGGACAATTTTAAATCTAAATATCCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: PAEKGYHRRLLPTQY*YQPTRTILNLNILK Trigger: CTTCAGGATATTTAGATTTAAAATTGTCCTTGTAGGTTGATAGCAGTACTGAGTCGGCAGAAGCCGCCTGTGATATCCTTTCTCAGCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
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| 3UTR TCA 90 bp | CACAAAGTGAGACTTGGGCACATTCATGAAACTTGGTTTGGCTGTTaGAATCAATCCCAAGGTCTGGATAGAACAATTTACCAGCTGAGA | + |
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Preference number: 1 (lower is better) Translates to: HKVRLGHIHETWFGC*NQSQGLDRTIYQLR Trigger: TCTCAGCTGGTAAATTGTTCTATCCAGACCTTGGGATTGATTTCAACAGCCAAACCAAGTTTCATGAATGTGCCCAAGTCTCACTTTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
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| 3UTR GCA 90 bp | CATGTGATGGTTAGCATGTGTTATCAACCTGACAGGACCTTGAATTaGCTTGGAGCCTTTGGGGATCATTGTATGTATGTATGTATGTAT | + |
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Preference number: 1 (lower is better) Translates to: HVMVSMCYQPDRTLN*LGAFGDHCMYVCMY Trigger: ATACATACATACATACATACAATGATCCCCAAAGGCTCCAAGGCAATTCAAGGTCCTGTCAGGTTGATAACACATGCTAACCATCACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
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| 3UTR GCA 90 bp | TTAAATCTAAATATCCTGAAGGCATTTTATCAGAACTACTGGAAATaGAATTACTTCATGGAATCCAGCAACCGAGTTCTGTTCATCCCT | + |
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Preference number: 1 (lower is better) Translates to: LNLNILKAFYQNYWK*NYFMESSNRVLFIP Trigger: AGGGATGAACAGAACTCGGTTGCTGGATTCCATGAAGTAATTGCATTTCCAGTAGTTCTGATAAAATGCCTTCAGGATATTTAGATTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
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| 3UTR CAA 90 bp | TGCTTGGCAATACGGATGAGTTCACTGTCCAGGGGCAGAAGGCCATaGGCACACACCACTAACTCGATCAGCCTCGGGCAGTTAAGACCT | + |
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Preference number: 2 (lower is better) Translates to: CLAIRMSSLSRGRRP*AHTTNSISLGQLRP Trigger: AGGTCTTAACTGCCCGAGGCTGATCGAGTTAGTGGTGTGTGCCAATGGCCTTCTGCCCCTGGACAGTGAACTCATCCGTATTGCCAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGCTGCTGAGGTCTCAAAACCCAGACGACGTCTTCTCTGGGCTTTTCTGACCGGTAACACAGTTCCCTaGCTGGACTCCTGGACTGTG | + |
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Preference number: 2 (lower is better) Translates to: RAAEVSKPRRRLLWAFLTGNTVP*LDSWTV Trigger: CACAGTCCAGGAGTCCAGCCAGGGAACTGTGTTACC...GGTCAGAAAAGCCCAGAGAAGACGTCGTCTGGGTTTTGAGACCTCAGCAGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGCTGCTGAGGTCTCAAAACCCAGACGACGTCTTCTCTGGGCTTTTCTGACCGACTGTGAAGGGGGATaGGAACTGAACAGCAGCATG | + |
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Preference number: 2 (lower is better) Translates to: RAAEVSKPRRRLLWAFLTDCEGG*ELNSSM Trigger: CATGCTGCTGTTCAGTTCCCATCCCCCTTCACAGTC...GGTCAGAAAAGCCCAGAGAAGACGTCGTCTGGGTTTTGAGACCTCAGCAGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCCCAGGTGCTTAGAGACTTCAGTGTGGACTTCATCTGGGGTGTACCTGTCGGACAGCTACTCATTTTaGGGAGTCGAAGGGTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: LPRCLETSVWTSSGVYLSDSYSF*GVEGCH Trigger: GTGACACCCTTCGACTCCTCAAAATGAGTAGCTGTC...CGACAGGTACACCCCAGATGAAGTCCACACTGAAGTCTCTAAGCACCTGGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
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| 3UTR CAA 90 bp | GGAGGTCAAAGGTCACCATTGCAGAAGCTGGTTCTCTGTCTGGTCTaGCCATCAGATGGGTTCTGGGAATCAAACTCAGGTTCTTCGGCT | + |
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Preference number: 2 (lower is better) Translates to: GGQRSPLQKLVLCLV*PSDGFWESNSGSSA Trigger: AGCCGAAGAACCTGAGTTTGATTCCCAGAACCCATCTGATGGCAAGACCAGACAGAGAACCAGCTTCTGCAATGGTGACCTTTGACCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAGCATGGAGCATCCTCTGCTGCCTGAAAATGGACGCCTTGCGAGCAGATGCCGGGATGAGTGGACTTaGAATAAGAAGTTGCTGATT | + |
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Preference number: 2 (lower is better) Translates to: SSMEHPLLPENGRLASRCRDEWT*NKKLLI Trigger: AATCAGCAACTTCTTATTTCAAGTCCACTCATCCCG...GCATCTGCTCGCAAGGCGTCCATTTTCAGGCAGCAGAGGATGCTCCATGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCATGGAGCATCCTCTGCTGCCTGAAAATGGACGCCTTGCGAGCAGATGCGTGGGATACAAATCCTaGAGATTTACCAAGTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: SSMEHPLLPENGRLASRCVGYKS*RFTKCL Trigger: CAAGCACTTGGTAAATCTCCAGGATTTGTATCCCAC...GCATCTGCTCGCAAGGCGTCCATTTTCAGGCAGCAGAGGATGCTCCATGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
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| 3UTR-3UTR CCA 90 bp | GAATGGAACTTGATCTGCCCCGGGTTTTCACTCACAACGTCTATCCGGAGATGTTCACGTGAGTCTCGCTaGAGAGCGCAAGGAGAATTT | + |
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Preference number: 2 (lower is better) Translates to: EWNLICPGFSLTTSIRRCSRESR*RAQGEF Trigger: AAATTCTCCTTGCGCTCTCCAGCGAGACTCACGTGA...ACATCTCCGGATAGACGTTGTGAGTGAAAACCCGGGGCAGATCAAGTTCCATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
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| 3UTR CAA 90 bp | ACTTCACACTCACTCAGGCCCAAGGAGGTTAGATTTTTACAATGCTaGGCAATACGGATGAGTTCACTGTCCAGGGGCAGAAGGCCATTG | + |
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Preference number: 2 (lower is better) Translates to: TSHSLRPKEVRFLQC*AIRMSSLSRGRRPL Trigger: CAATGGCCTTCTGCCCCTGGACAGTGAACTCATCCGTATTGCCAAGCATTGTAAAAATCTAACCTCCTTGGGCCTGAGTGAGTGTGAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
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| 3UTR-3UTR TCA 90 bp | CACAAACTCTACAAATGCGCTGCAGCTGACTTCACACTCACTCAGGCCCAAGGAACTTGGGCACATTCATaGAACTTGGTTTGGCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: HKLYKCAAADFTLTQAQGTWAHS*NLVWLL Trigger: CAACAGCCAAACCAAGTTTCATGAATGTGCCCAAGT...TCCTTGGGCCTGAGTGAGTGTGAAGTCAGCTGCAGCGCATTTGTAGAGTTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
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| 3UTR CAA 90 bp | CATCAGACAATGCTGGTCATTTTTCAGCAACTCCGTCTTTCCTCATaGCTCATCCAGTATCACATGTTAACTGAGAGGCAGACCCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: HQTMLVIFQQLRLSS*LIQYHMLTERQTLG Trigger: CCCCAGGGTCTGCCTCTCAGTTAACATGTGATACTGGATGAGCAATGAGGAAAGACGGAGTTGCTGAAAAATGACCAGCATTGTCTGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
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| 3UTR CAA 90 bp | TACTTCTGGACCCCCAGGGTAGGCCCTTTCTCCCTTACATTGCTTTaGACAGGTTATTTTCTCACAGCCACAGGACAAGCAACTAAGACA | + |
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Preference number: 2 (lower is better) Translates to: YFWTPRVGPFSLTLL*TGYFLTATGQATKT Trigger: TGTCTTAGTTGCTTGTCCTGTGGCTGTGAGAAAATAACCTGTCAAAAGCAATGTAAGGGAGAAAGGGCCTACCCTGGGGGTCCAGAAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
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| 3UTR CAA 90 bp | TGTTTGATCAGTGCGTCCCAGCTGCGTTTCTTAATAGAATGGAACTaGATCTGCCCCGGGTTTTCACTCACAACGTCTATCCGGAGATGT | + |
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Preference number: 2 (lower is better) Translates to: CLISASQLRFLIEWN*ICPGFSLTTSIRRC Trigger: ACATCTCCGGATAGACGTTGTGAGTGAAAACCCGGGGCAGATCAAGTTCCATTCTATTAAGAAACGCAGCTGGGACGCACTGATCAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
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| 3UTR-3UTR TCA 90 bp | GACCAGAACTTCCTCCATGATAGACAGCTGGGTGAGCCTTCTGCCACAGAGTCTGAAATAAGAAGTTGCTaGTTGGTTCAGCTCAAACTC | + |
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Preference number: 2 (lower is better) Translates to: DQNFLHDRQLGEPSATESEIRSC*LVQLKL Trigger: GAGTTTGAGCTGAACCAATCAGCAACTTCTTATTTC...AGACTCTGTGGCAGAAGGCTCACCCAGCTGTCTATCATGGAGGAAGTTCTGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGCTGCTGAGGTCTCAAAACCCAGACGACGTCTTCTCTGGGCTTTTCTGACCAAAATGTCCTGCATGTaGTGGTTAGCATGTGTTATC | + |
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Preference number: 2 (lower is better) Translates to: RAAEVSKPRRRLLWAFLTKMSCM*WLACVI Trigger: GATAACACATGCTAACCATCACATGCAGGACATTTT...GGTCAGAAAAGCCCAGAGAAGACGTCGTCTGGGTTTTGAGACCTCAGCAGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCGTTTCTTAATAGAATGGAACTTGATCTGCCCCGGGTTTTCACTCACAACGGAGGATCCCATCAGATaGAACGTGAGGACAGCTACT | + |
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Preference number: 2 (lower is better) Translates to: LRFLIEWNLICPGFSLTTEDPIR*NVRTAT Trigger: AGTAGCTGTCCTCACGTTTCATCTGATGGGATCCTC...CGTTGTGAGTGAAAACCCGGGGCAGATCAAGTTCCATTCTATTAAGAAACGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
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| 3UTR-3UTR TCA 90 bp | TTTTTACAATGCTTGGCAATACGGATGAGTTCACTGTCCAGGGGCAGAAGGCCAGATGGCTCTGCTTACTaGACGTCCGAAATAAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: FLQCLAIRMSSLSRGRRPDGSAY*TSEIKV Trigger: CACCTTTATTTCGGACGTTCAGTAAGCAGAGCCATC...TGGCCTTCTGCCCCTGGACAGTGAACTCATCCGTATTGCCAAGCATTGTAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
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| 3UTR-3UTR CCA 90 bp | GACCAGAACTTCCTCCATGATAGACAGCTGGGTGAGCCTTCTGCCACAGAGTCTCAAAGATCAGGGATGTaGAATACTTCATTCCATCTC | + |
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Preference number: 2 (lower is better) Translates to: DQNFLHDRQLGEPSATESQRSGM*NTSFHL Trigger: GAGATGGAATGAAGTATTCCACATCCCTGATCTTTG...AGACTCTGTGGCAGAAGGCTCACCCAGCTGTCTATCATGGAGGAAGTTCTGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
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| 3UTR-3UTR TCA 90 bp | CACAAACTCTACAAATGCGCTGCAGCTGACTTCACACTCACTCAGGCCCAAGGAGTATCTGTGTCCTACTaGCAAAGATCTCTGTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: HKLYKCAAADFTLTQAQGVSVSY*QRSLFK Trigger: TTTGAACAGAGATCTTTGTCAGTAGGACACAGATAC...TCCTTGGGCCTGAGTGAGTGTGAAGTCAGCTGCAGCGCATTTGTAGAGTTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
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| 3UTR-3UTR TCA 90 bp | GAATGGAACTTGATCTGCCCCGGGTTTTCACTCACAACGTCTATCCGGAGATGTTTAAAGCTGACATACTaGAGATGTGCAGCGTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: EWNLICPGFSLTTSIRRCLKLTY*RCAACF Trigger: AAAGCACGCTGCACATCTTCAGTATGTCAGCTTTAA...ACATCTCCGGATAGACGTTGTGAGTGAAAACCCGGGGCAGATCAAGTTCCATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
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| 3UTR-3UTR TCA 90 bp | AGACAGCGGTCTCTGCATCAGACAATGCTGGTCATTTTTCAGCAACTCCGTCTTACTTGGTTTGGCTGTTaGAATCAATCCCAAGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: RQRSLHQTMLVIFQQLRLTWFGC*NQSQGL Trigger: CAGACCTTGGGATTGATTTCAACAGCCAAACCAAGT...AAGACGGAGTTGCTGAAAAATGACCAGCATTGTCTGATGCAGAGACCGCTGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGCTGCTGAGGTCTCAAAACCCAGACGACGTCTTCTCTGGGCTTTTCTGACCCATTTAAGATGGCACTaGGTACTAATGAATGATGGA | + |
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Preference number: 2 (lower is better) Translates to: RAAEVSKPRRRLLWAFLTHLRWH*VLMNDG Trigger: TCCATCATTCATTAGTACTCAGTGCCATCTTAAATG...GGTCAGAAAAGCCCAGAGAAGACGTCGTCTGGGTTTTGAGACCTCAGCAGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCATCCTTCAAAGTTGGAGTGTGAGAAGAAGACAATAAATGGGCTAAATTCAGCTTCGAGCTCCTGCTaGCCTGACTTCCTGACCGTG | + |
|
Preference number: 2 (lower is better) Translates to: SHPSKLECEKKTINGLNSASSSC*PDFLTV Trigger: CACGGTCAGGAAGTCAGGGCAGCAGGAGCTCGAAGC...TGAATTTAGCCCATTTATTGTCTTCTTCTCACACTCCAACTTTGAAGGATGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTCATCCTTCAAAGTTGGAGTGTGAGAAGAAGACAATAAATGGGCTAAATTCAGATGCTTCGAGCTCCTaGTGCCCTGACTTCCTGACC | + |
|
Preference number: 2 (lower is better) Translates to: SHPSKLECEKKTINGLNSDASSS*CPDFLT Trigger: GGTCAGGAAGTCAGGGCAGCAGGAGCTCGAAGCATC...TGAATTTAGCCCATTTATTGTCTTCTTCTCACACTCCAACTTTGAAGGATGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR-3UTR TCA 90 bp | CTAACAGAAAATTCAGCATCTTTGGTAGCTGGTTACCAGATGGGCATCACATCCACTTGGTTTGGCTGTTaGAATCAATCCCAAGGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LTENSASLVAGYQMGITSTWFGC*NQSQGL Trigger: CAGACCTTGGGATTGATTTCAACAGCCAAACCAAGT...GGATGTGATGCCCATCTGGTAACCAGCTACCAAAGATGCTGAATTTTCTGTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTCATCCTTCAAAGTTGGAGTGTGAGAAGAAGACAATAAATGGGCTAAATTCATGGACTCCTGGACTGTaGAGGGGGATGGGAACTGAA | + |
|
Preference number: 2 (lower is better) Translates to: SHPSKLECEKKTINGLNSWTPGL*RGMGTE Trigger: TTCAGTTCCCATCCCCCTTCACAGTCCAGGAGTCCA...TGAATTTAGCCCATTTATTGTCTTCTTCTCACACTCCAACTTTGAAGGATGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTCAAGGACAACAGCACTCTTACCTTGGGCACATTCATGAAACTTGGTTTGGCGAAATAAGAAGTTGCTaGTTGGTTCAGCTCAAACTC | + |
|
Preference number: 2 (lower is better) Translates to: SQGQQHSYLGHIHETWFGEIRSC*LVQLKL Trigger: GAGTTTGAGCTGAACCAATCAGCAACTTCTTATTTC...GCCAAACCAAGTTTCATGAATGTGCCCAAGGTAAGAGTGCTGTTGTCCTTGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR CAA 90 bp | AGAAAGAAGTTTAGCATATCTCTCAAGGACAACAGCACTCTTACCTaGGGCACATTCATGAAACTTGGTTTGGCTGTTGAAATCAATCCC | + |
|
Preference number: 2 (lower is better) Translates to: RKKFSISLKDNSTLT*GTFMKLGLAVEINP Trigger: GGGATTGATTTCAACAGCCAAACCAAGTTTCATGAATGTGCCCAAGGTAAGAGTGCTGTTGTCCTTGAGAGATATGCTAAACTTCTTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGAATGCCTCAAACTCTTCTTCATACAAGAAGAAGTACATGACGACGTTCACTCGGGATGAGTGGACTTaGAATAAGAAGTTGCTGATT | + |
|
Preference number: 2 (lower is better) Translates to: KNASNSSSYKKKYMTTFTRDEWT*NKKLLI Trigger: AATCAGCAACTTCTTATTTCAAGTCCACTCATCCCG...AGTGAACGTCGTCATGTACTTCTTCTTGTATGAAGAAGAGTTTGAGGCATTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
||
| 3UTR-3UTR TCA 90 bp | GCGTGGACACAAACATCATTTAGAAAGAAGTTTAGCATATCTCTCAAGGACAACTTAAAGCTGACATACTaGAGATGTGCAGCGTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: AWTQTSFRKKFSISLKDNLKLTY*RCAACF Trigger: AAAGCACGCTGCACATCTTCAGTATGTCAGCTTTAA...GTTGTCCTTGAGAGATATGCTAAACTTCTTTCTAAATGATGTTTGTGTCCACGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR CCA 72 bp | GTCCCCCAGTCCAGAAGGACAGAGAGCGCATGGGTCTaGCGGAGGGAAGAGCAGAGCCCACGTTTGGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: VPQSRRTESAWV*RREEQSPRLGC Trigger: ACAGCCCAAACGTGGGCTCTGCTCTTCCCTCCGCCAGACCCATGCGCTCTCTGTCCTTCTGGACTGGGGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124981.2 ENSMUST00000128668.8 |
||
| 3UTR CCA 72 bp | GGTAAAGTCCCCCAGTCCAGAAGGACAGAGAGCGCATaGGTCTGGCGGAGGGAAGAGCAGAGCCCACGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: GKVPQSRRTESA*VWRREEQSPRL Trigger: CAAACGTGGGCTCTGCTCTTCCCTCCGCCAGACCCATGCGCTCTCTGTCCTTCTGGACTGGGGGACTTTACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124981.2 ENSMUST00000128668.8 |
||
| 3UTR GCA 72 bp | AAGTCTGCACGGCACGCAGCCATGTGCTTCCCTTTCTaGATTGTCAGTGCTGGCCTTCCCACGGCAGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: KSARHAAMCFPF*IVSAGLPTAAE Trigger: CTCAGCTGCCGTGGGAAGGCCAGCACTGACAATGCAGAAAGGGAAGCACATGGCTGCGTGCCGTGCAGACTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR GCA 72 bp | TGCTCACAGAGCAAGTCTGCACGGCACGCAGCCATGTaGTTCCCTTTCTGCATTGTCAGTGCTGGCCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: CSQSKSARHAAM*FPFCIVSAGLP Trigger: GGGAAGGCCAGCACTGACAATGCAGAAAGGGAAGCACATGGCTGCGTGCCGTGCAGACTTGCTCTGTGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR CCA 72 bp | AGTTCCCTGGCTGGACTCCTGGACTGTGAAGGGGGATaGGAACTGAACAGCAGCATGGAGCATCCTCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SSLAGLLDCEGG*ELNSSMEHPLL Trigger: CAGCAGAGGATGCTCCATGCTGCTGTTCAGTTCCCATCCCCCTTCACAGTCCAGGAGTCCAGCCAGGGAACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR CCA 72 bp | GATGGGTTCTGGGAATCAAACTCAGGTTCTTCGGCTTaGCGGGAAGCGTCCTTACCCACTGAGCCATCTCGC | + |
|
Preference number: 3 (lower is better) Translates to: DGFWESNSGSSA*REASLPTEPSR Trigger: GCGAGATGGCTCAGTGGGTAAGGACGCTTCCCGCCAAGCCGAAGAACCTGAGTTTGATTCCCAGAACCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR-3UTR CAA 90 bp | CCATGTGCTTCCCTTTCTGCATTGTCAGTGCTGGCCTTCCCACGGCAGCTGAGGGGCTTTTCTGACCCCTaGCCAGGAGAAATACATTTC | + |
|
Preference number: 3 (lower is better) Translates to: PCASLSALSVLAFPRQLRGFSDP*PGEIHF Trigger: GAAATGTATTTCTCCTGGCAAGGGGTCAGAAAAGCC...CCTCAGCTGCCGTGGGAAGGCCAGCACTGACAATGCAGAAAGGGAAGCACATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR TCA 72 bp | TCTTTCCTCATTGCTCATCCAGTATCACATGTTAACTaGGAGGCAGACCCTGGGGCTAGCTGGCCAGCCGCT | + |
|
Preference number: 3 (lower is better) Translates to: SFLIAHPVSHVN*EADPGASWPAA Trigger: AGCGGCTGGCCAGCTAGCCCCAGGGTCTGCCTCTCAGTTAACATGTGATACTGGATGAGCAATGAGGAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR TCA 72 bp | CGGAGAAGAACTGGTGACACACAGGTGAGGCCTAAGTaGGACAGCGGTCTCTGCATCAGACAATGCTGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: RRRTGDTQVRPK*DSGLCIRQCWS Trigger: TGACCAGCATTGTCTGATGCAGAGACCGCTGTCTCACTTAGGCCTCACCTGTGTGTCACCAGTTCTTCTCCG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR GCA 72 bp | ATGGACGCCTTGCGAGCAGATGCTTCGAGCTCCTGCTaGCCTGACTTCCTGACCGTGATGAACTATACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: MDALRADASSSC*PDFLTVMNYTS Trigger: AGAAGTATAGTTCATCACGGTCAGGAAGTCAGGGCAGCAGGAGCTCGAAGCATCTGCTCGCAAGGCGTCCAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR CCA 72 bp | TCCCAGGTGCTTAGAGACTTCAGTGTGGACTTCATCTaGGGTGTACCTGTCGTCAGGGACCAGAACTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SQVLRDFSVDFI*GVPVVRDQNFL Trigger: GAGGAAGTTCTGGTCCCTGACGACAGGTACACCCCAGATGAAGTCCACACTGAAGTCTCTAAGCACCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
||
| 3UTR TCA 72 bp | TGGTCCGCCACACAGAGGATCCCATCAGATGAAACGTaGGGACAGCTACTCATTTTGAGGAGTCGAAGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: WSATQRIPSDET*GQLLILRSRRV Trigger: CACCCTTCGACTCCTCAAAATGAGTAGCTGTCCTCACGTTTCATCTGATGGGATCCTCTGTGTGGCGGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
||
| 3UTR TCA 72 bp | CTGACAGTGGTCCGCCACACAGAGGATCCCATCAGATaGAACGTGAGGACAGCTACTCATTTTGAGGAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: LTVVRHTEDPIR*NVRTATHFEES Trigger: CGACTCCTCAAAATGAGTAGCTGTCCTCACGTTTCATCTGATGGGATCCTCTGTGTGGCGGACCACTGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
||
| 3UTR TCA 72 bp | GTTAAGACCTATCCGGCCCAGGATGGCTCTGCTTACTaGACGTCCGAAATAAAGGTGAGTGACGGGGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: VKTYPAQDGSAY*TSEIKVSDGGF Trigger: GAAACCCCCGTCACTCACCTTTATTTCGGACGTTCAGTAAGCAGAGCCATCCTGGGCCGGATAGGTCTTAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
||
| 3UTR GCA 72 bp | TGCTTTTGCCCACACGTGGAGGTCAAAGGTCACCATTaGAGAAGCTGGTTCTCTGTCTGGTCTTGCCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: CFCPHVEVKGHH*RSWFSVWSCHQ Trigger: CTGATGGCAAGACCAGACAGAGAACCAGCTTCTGCAATGGTGACCTTTGACCTCCACGTGTGGGCAAAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR GCA 72 bp | TGCATGGCACAGACTTTAATGCTCACAGAGCAAGTCTaGACGGCACGCAGCCATGTGCTTCCCTTTCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: CMAQTLMLTEQV*TARSHVLPFLH Trigger: ATGCAGAAAGGGAAGCACATGGCTGCGTGCCGTGCAGACTTGCTCTGTGAGCATTAAAGTCTGTGCCATGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR CCA 72 bp | CTATCCGGAGATGTTCGAGGTTCACGTGAGTCTCGCTaGAGAGCGCAAGGAGAATTTCGTCGCTCAGAATGT | + |
|
Preference number: 3 (lower is better) Translates to: LSGDVRGSRESR*RAQGEFRRSEC Trigger: ACATTCTGAGCGACGAAATTCTCCTTGCGCTCTCCAGCGAGACTCACGTGAACCTCGAACATCTCCGGATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGCATGGAGCATCCTCTGCTGCCTGAAAATGGACGCCTTGCGAGCAGATGCATAAGTACATCTGTCTaGTGGTTCAGTCTGAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: SSMEHPLLPENGRLASRCISTSV*WFSLSD Trigger: GTCACTCAGACTGAACCACAAGACAGATGTACTTAT...GCATCTGCTCGCAAGGCGTCCATTTTCAGGCAGCAGAGGATGCTCCATGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR-3UTR CAA 90 bp | GACCAGAACTTCCTCCATGATAGACAGCTGGGTGAGCCTTCTGCCACAGAGTCTACGGGGGTTTCCTCTTaGAAGAATGCCTCAAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: DQNFLHDRQLGEPSATESTGVSS*KNASNS Trigger: AGAGTTTGAGGCATTCTTCAAAGAGGAAACCCCCGT...AGACTCTGTGGCAGAAGGCTCACCCAGCTGTCTATCATGGAGGAAGTTCTGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
||
| 3UTR GCA 72 bp | GGTCACCATTGCAGAAGCTGGTTCTCTGTCTGGTCTTaGCATCAGATGGGTTCTGGGAATCAAACTCAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: GHHCRSWFSVWS*HQMGSGNQTQV Trigger: AACCTGAGTTTGATTCCCAGAACCCATCTGATGGCAAGACCAGACAGAGAACCAGCTTCTGCAATGGTGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR GCA 72 bp | CACTCACTCAGGCCCAAGGAGGTTAGATTTTTACAATaGTTGGCAATACGGATGAGTTCACTGTCCAGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: HSLRPKEVRFLQ*LAIRMSSLSRG Trigger: GCCCCTGGACAGTGAACTCATCCGTATTGCCAAGCATTGTAAAAATCTAACCTCCTTGGGCCTGAGTGAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
||
| 3UTR TCA 72 bp | AGGAGGTTAGATTTTTACAATGCTTGGCAATACGGATaGGTTCACTGTCCAGGGGCAGAAGGCCATTGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: RRLDFYNAWQYG*VHCPGAEGHWH Trigger: GTGCCAATGGCCTTCTGCCCCTGGACAGTGAACTCATCCGTATTGCCAAGCATTGTAAAAATCTAACCTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
||
| 3UTR GCA 72 bp | AAAGATCAGGGATGTGGAATACTTCATTCCATCTCCTaGACACGGACGAAGCCCGGGCTCGATCTATTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: KDQGCGILHSIS*TRTKPGLDLLK Trigger: CTTTAATAGATCGAGCCCGGGCTTCGTCCGTGTGCAGGAGATGGAATGAAGTATTCCACATCCCTGATCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124981.2 ENSMUST00000128668.8 |
||
| 3UTR GCA 72 bp | TCCCAGCTGCGTTTCTTAATAGAATGGAACTTGATCTaGCCCGGGTTTTCACTCACAACGTCTATCCGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SQLRFLIEWNLI*PGFSLTTSIRR Trigger: TCTCCGGATAGACGTTGTGAGTGAAAACCCGGGGCAGATCAAGTTCCATTCTATTAAGAAACGCAGCTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
||
| 3UTR CCA 72 bp | GTCAAAGGTCACCATTGCAGAAGCTGGTTCTCTGTCTaGTCTTGCCATCAGATGGGTTCTGGGAATCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: VKGHHCRSWFSV*SCHQMGSGNQT Trigger: AGTTTGATTCCCAGAACCCATCTGATGGCAAGACCAGACAGAGAACCAGCTTCTGCAATGGTGACCTTTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR CCA 72 bp | TTGATCAGTGCGTCCCAGCTGCGTTTCTTAATAGAATaGAACTTGATCTGCCCCGGGTTTTCACTCACAACG | + |
|
Preference number: 3 (lower is better) Translates to: LISASQLRFLIE*NLICPGFSLTT Trigger: CGTTGTGAGTGAAAACCCGGGGCAGATCAAGTTCCATTCTATTAAGAAACGCAGCTGGGACGCACTGATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCGTTTCTTAATAGAATGGAACTTGATCTGCCCCGGGTTTTCACTCACAACGCGAAGGGTGTCACTGTaGTTAGCCACAAGAATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LRFLIEWNLICPGFSLTTRRVSL*LATRIF Trigger: GAAGATTCTTGTGGCTAACAACAGTGACACCCTTCG...CGTTGTGAGTGAAAACCCGGGGCAGATCAAGTTCCATTCTATTAAGAAACGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
||
| 3UTR TCA 72 bp | ATCAATCCCAAGGTCTGGATAGAACAATTTACCAGCTaGGAAAGGATATCACAGGCGGCTTCTGCCGACTCA | + |
|
Preference number: 3 (lower is better) Translates to: INPKVWIEQFTS*ERISQAASADS Trigger: TGAGTCGGCAGAAGCCGCCTGTGATATCCTTTCTCAGCTGGTAAATTGTTCTATCCAGACCTTGGGATTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124981.2 ENSMUST00000128668.8 |
||
| 3UTR TCA 72 bp | GAGTTGACAAACACGACCGTAAGTGCCGACACAAAGTaGGACTTGGGCACATTCATGAAACTTGGTTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ELTNTTVSADTK*DLGTFMKLGLA Trigger: AGCCAAACCAAGTTTCATGAATGTGCCCAAGTCTCACTTTGTGTCGGCACTTACGGTCGTGTTTGTCAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
||
| 3UTR GCA 72 bp | ATTTACCAGCTGAGAAAGGATATCACAGGCGGCTTCTaGCGACTCAGTACTGCTATCAACCTACAAGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: IYQLRKDITGGF*RLSTAINLQGQ Trigger: TTGTCCTTGTAGGTTGATAGCAGTACTGAGTCGGCAGAAGCCGCCTGTGATATCCTTTCTCAGCTGGTAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR GCA 72 bp | ATTTACCAGCTGAGAAAGGATATCACAGGCGGCTTCTaGCGACTCAGTACTGCTATCAACCTTAAAGCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: IYQLRKDITGGF*RLSTAINLKAD Trigger: GTCAGCTTTAAGGTTGATAGCAGTACTGAGTCGGCAGAAGCCGCCTGTGATATCCTTTCTCAGCTGGTAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
||
| 3UTR TCA 72 bp | AGGTGGGATACAAATCCTGGAGATTTACCAAGTGCTTaGAAGCCAGGATCCAAACACAGAAAACTCGGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: RWDTNPGDLPSA*KPGSKHRKLGN Trigger: GTTGCCGAGTTTTCTGTGTTTGGATCCTGGCTTTCAAGCACTTGGTAAATCTCCAGGATTTGTATCCCACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121095.8 ENSMUST00000124981.2 |
||
| 3UTR CCA 72 bp | TATGTTTACACATGTTCACATGCTTTTGCCCACACGTaGAGGTCAAAGGTCACCATTGCAGAAGCTGGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: YVYTCSHAFAHT*RSKVTIAEAGS Trigger: AGAACCAGCTTCTGCAATGGTGACCTTTGACCTCCACGTGTGGGCAAAAGCATGTGAACATGTGTAAACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR-3UTR CAA 90 bp | AGATTTTTACAATGCTTGGCAATACGGATGAGTTCACTGTCCAGGGGCAGAAGGATAAGTACATCTGTCTaGTGGTTCAGTCTGAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: RFLQCLAIRMSSLSRGRRISTSV*WFSLSD Trigger: GTCACTCAGACTGAACCACAAGACAGATGTACTTAT...CCTTCTGCCCCTGGACAGTGAACTCATCCGTATTGCCAAGCATTGTAAAAATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGAATGCCTCAAACTCTTCTTCATACAAGAAGAAGTACATGACGACGTTCACTGGACAGCTACTCATTTaGAGGAGTCGAAGGGTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: KNASNSSSYKKKYMTTFTGQLLI*RSRRVS Trigger: TGACACCCTTCGACTCCTCAAAATGAGTAGCTGTCC...AGTGAACGTCGTCATGTACTTCTTCTTGTATGAAGAAGAGTTTGAGGCATTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
||
| 3UTR TCA 72 bp | GATCTATTAAAGGAAGGTACTGAAAGATCTGTAATATaGCATGGTGAGGTAAAGTCCCCCAGTCCAGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: DLLKEGTERSVI*HGEVKSPSPEG Trigger: TCCTTCTGGACTGGGGGACTTTACCTCACCATGTCATATTACAGATCTTTCAGTACCTTCCTTTAATAGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124981.2 ENSMUST00000128668.8 |
||
| 3UTR GCA 72 bp | AATAATCTGAAGCATTATACTGCATGCCCTAAGAACTaGATGGCACAGACTTTAATGCTCACAGAGCAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: NNLKHYTACPKN*MAQTLMLTEQV Trigger: GACTTGCTCTGTGAGCATTAAAGTCTGTGCCATGCAGTTCTTAGGGCATGCAGTATAATGCTTCAGATTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR GCA 72 bp | ACTGCTATCAACCTTAAAGCTGACATACTGAAGATGTaGAGCGTGCTTTTTGATGATCTGTTGAATGAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: TAINLKADILKM*SVLFDDLLNEV Trigger: GACCTCATTCAACAGATCATCAAAAAGCACGCTGCACATCTTCAGTATGTCAGCTTTAAGGTTGATAGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
||
| 3UTR-3UTR CAA 90 bp | CACATGCGTGGACACAAACATCATTTAGAAAGAAGTTTAGCATATCTCTCAAGGAACAGCACTCTTACCTaGGGCACATTCATGAAACTT | + |
|
Preference number: 3 (lower is better) Translates to: HMRGHKHHLERSLAYLSRNSTLT*GTFMKL Trigger: AAGTTTCATGAATGTGCCCAAGGTAAGAGTGCTGTT...CCTTGAGAGATATGCTAAACTTCTTTCTAAATGATGTTTGTGTCCACGCATGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR TCA 72 bp | TACCTTGGGCACATTCATGAAACTTGGTTTGGCTGTTaGAATCAATCCCAAGGTCTGGATAGAACAATTTAC | + |
|
Preference number: 3 (lower is better) Translates to: YLGHIHETWFGC*NQSQGLDRTIY Trigger: GTAAATTGTTCTATCCAGACCTTGGGATTGATTTCAACAGCCAAACCAAGTTTCATGAATGTGCCCAAGGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR TCA 72 bp | AGACTTGGGCACATTCATGAAACTTGGTTTGGCTGTTaGAATCAATCCCAAGGTCTGGATAGAACAATTTAC | + |
|
Preference number: 3 (lower is better) Translates to: RLGHIHETWFGC*NQSQGLDRTIY Trigger: GTAAATTGTTCTATCCAGACCTTGGGATTGATTTCAACAGCCAAACCAAGTTTCATGAATGTGCCCAAGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
||
| 3UTR GCA 72 bp | AAAGGATATCACAGGCGGCTTCTGCCGACTCAGTACTaGTATCAACCTACAAGGACAATTTTAAATCTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: KGYHRRLLPTQY*YQPTRTILNLN Trigger: ATTTAGATTTAAAATTGTCCTTGTAGGTTGATAGCAGTACTGAGTCGGCAGAAGCCGCCTGTGATATCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTTATCAGAACTACTGGAAATGCAATTACTTCATGGAATCCAGCAACCGAGTCTTTTTGATGATCTGTaGAATGAGGTCGGGATGAGT | + |
|
Preference number: 3 (lower is better) Translates to: ILSELLEMQLLHGIQQPSLFDDL*NEVGMS Trigger: ACTCATCCCGACCTCATTCAACAGATCATCAAAAAG...ACTCGGTTGCTGGATTCCATGAAGTAATTGCATTTCCAGTAGTTCTGATAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR TCA 72 bp | AAAAAGGAGAGACTCTCATCCTTCAAAGTTGGAGTGTaGGAAGAAGACAATAAATGGGCTAAATTCATCATT | + |
|
Preference number: 3 (lower is better) Translates to: KKERLSSFKVGV*EEDNKWAKFII Trigger: AATGATGAATTTAGCCCATTTATTGTCTTCTTCTCACACTCCAACTTTGAAGGATGAGAGTCTCTCCTTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR CAA 72 bp | CTGCACGGCACGCAGCCATGTGCTTCCCTTTCTGCATaGTCAGTGCTGGCCTTCCCACGGCAGCTGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHGTQPCASLSA*SVLAFPRQLRS Trigger: GCTCCTCAGCTGCCGTGGGAAGGCCAGCACTGACAATGCAGAAAGGGAAGCACATGGCTGCGTGCCGTGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR CAA 72 bp | ATACGGATGAGTTCACTGTCCAGGGGCAGAAGGCCATaGGCACACACCACTAACTCGATCAGCCTCGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IRMSSLSRGRRP*AHTTNSISLGQ Trigger: CTGCCCGAGGCTGATCGAGTTAGTGGTGTGTGCCAATGGCCTTCTGCCCCTGGACAGTGAACTCATCCGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
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| CDS-3UTR TCA 90 bp | ATACTTCATTCCATCTCCTGCACACGGACGAAGCCCGGGCTCGATCTATTAAAGGCTGAGCCAATGAAATaGCACTGCCATGGGGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: ILHSISCTRTKPGLDLLKAEPMK*HCHGVI Trigger: GATTACCCCATGGCAGTGTCATTTCATTGGCTCAGC...CTTTAATAGATCGAGCCCGGGCTTCGTCCGTGTGCAGGAGATGGAATGAAGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124981.2 ENSMUST00000128668.8 |
||
| CDS-3UTR TCA 90 bp | GAATGGAACTTGATCTGCCCCGGGTTTTCACTCACAACGTCTATCCGGAGATGTGCTGAGCCAATGAAATaGCACTGCCATGGGGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: EWNLICPGFSLTTSIRRCAEPMK*HCHGVI Trigger: GATTACCCCATGGCAGTGTCATTTCATTGGCTCAGC...ACATCTCCGGATAGACGTTGTGAGTGAAAACCCGGGGCAGATCAAGTTCCATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCCAAAGATCAGGGATGTGGAATACTTCATTCCATCTCCTGCACACGGACGTTACTGCTGAGCCAATaGAATGACACTGCCATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSKDQGCGILHSISCTRTLLLSQ*NDTAMG Trigger: CCCCATGGCAGTGTCATTTCATTGGCTCAGCAGTAA...CGTCCGTGTGCAGGAGATGGAATGAAGTATTCCACATCCCTGATCTTTGGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124981.2 ENSMUST00000128668.8 |
||
| CDS-3UTR TCA 90 bp | TATCCGGAGATGTTCGAGGTTCACGTGAGTCTCGCTGGAGAGCGCAAGGAGAATTCCCAGAAGCAGGACTaGCCTATAAAATCACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YPEMFEVHVSLAGERKENSQKQD*PIKSLK Trigger: CTTCAGTGATTTTATAGGTCAGTCCTGCTTCTGGGA...ATTCTCCTTGCGCTCTCCAGCGAGACTCACGTGAACCTCGAACATCTCCGGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
||
| 3UTR CAA 72 bp | ACCCCCAGGGTAGGCCCTTTCTCCCTTACATTGCTTTaGACAGGTTATTTTCTCACAGCCACAGGACAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPRVGPFSLTLL*TGYFLTATGQA Trigger: TGCTTGTCCTGTGGCTGTGAGAAAATAACCTGTCAAAAGCAATGTAAGGGAGAAAGGGCCTACCCTGGGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR CAA 72 bp | AGGTCACCATTGCAGAAGCTGGTTCTCTGTCTGGTCTaGCCATCAGATGGGTTCTGGGAATCAAACTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSPLQKLVLCLV*PSDGFWESNSG Trigger: ACCTGAGTTTGATTCCCAGAACCCATCTGATGGCAAGACCAGACAGAGAACCAGCTTCTGCAATGGTGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR CAA 72 bp | TCACTCAGGCCCAAGGAGGTTAGATTTTTACAATGCTaGGCAATACGGATGAGTTCACTGTCCAGGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLRPKEVRFLQC*AIRMSSLSRGR Trigger: TCTGCCCCTGGACAGTGAACTCATCCGTATTGCCAAGCATTGTAAAAATCTAACCTCCTTGGGCCTGAGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
||
| CDS-3UTR TCA 90 bp | GCGGCTTCTGCCGACTCAGTACTGCTATCAACCTACAAGGACAATTTTAAATCTTCCCAGAAGCAGGACTaGCCTATAAAATCACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AASADSVLLSTYKDNFKSSQKQD*PIKSLK Trigger: CTTCAGTGATTTTATAGGTCAGTCCTGCTTCTGGGA...AGATTTAAAATTGTCCTTGTAGGTTGATAGCAGTACTGAGTCGGCAGAAGCCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| 3UTR CAA 72 bp | AAGGTGGGATACAAATCCTGGAGATTTACCAAGTGCTaGAAAGCCAGGATCCAAACACAGAAAACTCGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KVGYKSWRFTKC*KARIQTQKTRQ Trigger: TTGCCGAGTTTTCTGTGTTTGGATCCTGGCTTTCAAGCACTTGGTAAATCTCCAGGATTTGTATCCCACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121095.8 ENSMUST00000124981.2 |
||
| CDS-3UTR CCA 90 bp | TCTAATACACACAGTATCTGTGTCCTACTGACAAAGATCTCTGTTCAAATTTGTGGGGCAGAAGGCCATTaGCACACACCACTAACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SNTHSICVLLTKISVQICGAEGH*HTPLTR Trigger: TCGAGTTAGTGGTGTGTGCCAATGGCCTTCTGCCCC...ACAAATTTGAACAGAGATCTTTGTCAGTAGGACACAGATACTGTGTGTATTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045428.7 ENSMUST00000121871.8 |
||
| 3UTR CAA 72 bp | ATACTGAAGATGTGCAGCGTGCTTTTTGATGATCTGTaGAATGAGGTCGGGATGAGTGGACTTGAAATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ILKMCSVLFDDL*NEVGMSGLEIR Trigger: TCTTATTTCAAGTCCACTCATCCCGACCTCATTCAACAGATCATCAAAAAGCACGCTGCACATCTTCAGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124981.2 ENSMUST00000128668.8 |
||
| 3UTR CAA 72 bp | CAAGGAAAGGTCCTTTTTCCTTCCACAAAATCAATTTaGGCTGTATTAGAGGTTCTACCAGCCCTGTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QGKVLFPSTKSI*AVLEVLPALLG Trigger: TCCTAACAGGGCTGGTAGAACCTCTAATACAGCCAAAATTGATTTTGTGGAAGGAAAAAGGACCTTTCCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| CDS-3UTR TCA 90 bp | TCTAATACACACAGTATCTGTGTCCTACTGACAAAGATCTCTGTTCAAATTTGTGACAGCTACTCATTTTaGGGAGTCGAAGGGTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SNTHSICVLLTKISVQICDSYSF*GVEGCH Trigger: GTGACACCCTTCGACTCCTCAAAATGAGTAGCTGTC...ACAAATTTGAACAGAGATCTTTGTCAGTAGGACACAGATACTGTGTGTATTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045428.7 ENSMUST00000121871.8 |
||
| CDS-3UTR TCA 90 bp | TCTAATACACACAGTATCTGTGTCCTACTGACAAAGATCTCTGTTCAAATTTGTGAGGATCCCATCAGATaGAACGTGAGGACAGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: SNTHSICVLLTKISVQICEDPIR*NVRTAT Trigger: AGTAGCTGTCCTCACGTTTCATCTGATGGGATCCTC...ACAAATTTGAACAGAGATCTTTGTCAGTAGGACACAGATACTGTGTGTATTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045428.7 ENSMUST00000121871.8 |
||
| CDS-3UTR TCA 90 bp | TCTAATACACACAGTATCTGTGTCCTACTGACAAAGATCTCTGTTCAAATTTGTGCTGAGCCAATGAAATaGCACTGCCATGGGGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: SNTHSICVLLTKISVQICAEPMK*HCHGVI Trigger: GATTACCCCATGGCAGTGTCATTTCATTGGCTCAGC...ACAAATTTGAACAGAGATCTTTGTCAGTAGGACACAGATACTGTGTGTATTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121871.8 ENSMUST00000128668.8 |
||
| CDS-3UTR TCA 90 bp | TCTAATACACACAGTATCTGTGTCCTACTGACAAAGATCTCTGTTCAAATTTGTTTACTGCTGAGCCAATaGAATGACACTGCCATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SNTHSICVLLTKISVQICLLLSQ*NDTAMG Trigger: CCCCATGGCAGTGTCATTTCATTGGCTCAGCAGTAA...ACAAATTTGAACAGAGATCTTTGTCAGTAGGACACAGATACTGTGTGTATTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121871.8 ENSMUST00000128668.8 |
||
| CDS-3UTR CCA 90 bp | TCTAATACACACAGTATCTGTGTCCTACTGACAAAGATCTCTGTTCAAATTTGTTCACGTGAGTCTCGCTaGAGAGCGCAAGGAGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: SNTHSICVLLTKISVQICSRESR*RAQGEF Trigger: AAATTCTCCTTGCGCTCTCCAGCGAGACTCACGTGA...ACAAATTTGAACAGAGATCTTTGTCAGTAGGACACAGATACTGTGTGTATTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045428.7 ENSMUST00000121871.8 |
||
| CDS-3UTR TCA 90 bp | TCTAATACACACAGTATCTGTGTCCTACTGACAAAGATCTCTGTTCAAATTTGTGATGGCTCTGCTTACTaGACGTCCGAAATAAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SNTHSICVLLTKISVQICDGSAY*TSEIKV Trigger: CACCTTTATTTCGGACGTTCAGTAAGCAGAGCCATC...ACAAATTTGAACAGAGATCTTTGTCAGTAGGACACAGATACTGTGTGTATTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045428.7 ENSMUST00000121871.8 |
||
| CDS-3UTR TCA 90 bp | TCTAATACACACAGTATCTGTGTCCTACTGACAAAGATCTCTGTTCAAATTTGTGAACAATTTACCAGCTaGGAAAGGATATCACAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SNTHSICVLLTKISVQICEQFTS*ERISQA Trigger: CGCCTGTGATATCCTTTCTCAGCTGGTAAATTGTTC...ACAAATTTGAACAGAGATCTTTGTCAGTAGGACACAGATACTGTGTGTATTAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045428.7 ENSMUST00000121871.8 |
||
| CDS-3UTR TCA 90 bp | TCTAATACACACAGTATCTGTGTCCTACTGACAAAGATCTCTGTTCAAATTTGTACTTGGTTTGGCTGTTaGAATCAATCCCAAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SNTHSICVLLTKISVQICTWFGC*NQSQGL Trigger: CAGACCTTGGGATTGATTTCAACAGCCAAACCAAGT...ACAAATTTGAACAGAGATCTTTGTCAGTAGGACACAGATACTGTGTGTATTAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045428.7 ENSMUST00000121871.8 |
||
| CDS-3UTR TCA 90 bp | TCTAATACACACAGTATCTGTGTCCTACTGACAAAGATCTCTGTTCAAATTTGTACTTGGGCACATTCATaGAACTTGGTTTGGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SNTHSICVLLTKISVQICTWAHS*NLVWLL Trigger: CAACAGCCAAACCAAGTTTCATGAATGTGCCCAAGT...ACAAATTTGAACAGAGATCTTTGTCAGTAGGACACAGATACTGTGTGTATTAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045428.7 ENSMUST00000121871.8 |
||
| CDS-3UTR TCA 90 bp | TCTAATACACACAGTATCTGTGTCCTACTGACAAAGATCTCTGTTCAAATTTGTCCATCAGATGAAACGTaGGGACAGCTACTCATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SNTHSICVLLTKISVQICPSDET*GQLLIL Trigger: CAAAATGAGTAGCTGTCCTCACGTTTCATCTGATGG...ACAAATTTGAACAGAGATCTTTGTCAGTAGGACACAGATACTGTGTGTATTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045428.7 ENSMUST00000121871.8 |
||
| CDS-3UTR CCA 90 bp | TCTAATACACACAGTATCTGTGTCCTACTGACAAAGATCTCTGTTCAAATTTGTCGTTTCTTAATAGAATaGAACTTGATCTGCCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SNTHSICVLLTKISVQICRFLIE*NLICPG Trigger: CCCGGGGCAGATCAAGTTCCATTCTATTAAGAAACG...ACAAATTTGAACAGAGATCTTTGTCAGTAGGACACAGATACTGTGTGTATTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045428.7 ENSMUST00000121871.8 |
||
| CDS-3UTR CCA 90 bp | TCTAATACACACAGTATCTGTGTCCTACTGACAAAGATCTCTGTTCAAATTTGTTTAGAGACTTCAGTGTaGACTTCATCTGGGGTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SNTHSICVLLTKISVQICLETSV*TSSGVY Trigger: GTACACCCCAGATGAAGTCCACACTGAAGTCTCTAA...ACAAATTTGAACAGAGATCTTTGTCAGTAGGACACAGATACTGTGTGTATTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045428.7 ENSMUST00000121871.8 |
||
| CDS-3UTR TCA 90 bp | TCTAATACACACAGTATCTGTGTCCTACTGACAAAGATCTCTGTTCAAATTTGTCGGGATGAGTGGACTTaGAATAAGAAGTTGCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: SNTHSICVLLTKISVQICRDEWT*NKKLLI Trigger: AATCAGCAACTTCTTATTTCAAGTCCACTCATCCCG...ACAAATTTGAACAGAGATCTTTGTCAGTAGGACACAGATACTGTGTGTATTAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045428.7 ENSMUST00000121871.8 |
||
| CDS-3UTR TCA 90 bp | TCTAATACACACAGTATCTGTGTCCTACTGACAAAGATCTCTGTTCAAATTTGTTTAAAGCTGACATACTaGAGATGTGCAGCGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SNTHSICVLLTKISVQICLKLTY*RCAACF Trigger: AAAGCACGCTGCACATCTTCAGTATGTCAGCTTTAA...ACAAATTTGAACAGAGATCTTTGTCAGTAGGACACAGATACTGTGTGTATTAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045428.7 ENSMUST00000121871.8 |
||
| CDS-3UTR TCA 90 bp | TCTAATACACACAGTATCTGTGTCCTACTGACAAAGATCTCTGTTCAAATTTGTTATTCCTCTTCATTCTaGAGGTGGCTTCCAAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SNTHSICVLLTKISVQICYSSSF*RWLPSY Trigger: GTAACTTGGAAGCCACCTTCAGAATGAAGAGGAATA...ACAAATTTGAACAGAGATCTTTGTCAGTAGGACACAGATACTGTGTGTATTAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121871.8 |
||
| 3UTR CAA 72 bp | TTTGCCCTCAAGATTGGCAGAATCCCATTTTCAGATTaGCTATTTCTGACAAAATCAGAAAGTGTGGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: FALKIGRIPFSD*LFLTKSESVET Trigger: TGTTTCCACACTTTCTGATTTTGTCAGAAATAGCAAATCTGAAAATGGGATTCTGCCAATCTTGAGGGCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124981.2 |
||
| CDS-3UTR TCA 90 bp | TCTAATACACACAGTATCTGTGTCCTACTGACAAAGATCTCTGTTCAAATTTGTGAAATAAGAAGTTGCTaGTTGGTTCAGCTCAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: SNTHSICVLLTKISVQICEIRSC*LVQLKL Trigger: GAGTTTGAGCTGAACCAATCAGCAACTTCTTATTTC...ACAAATTTGAACAGAGATCTTTGTCAGTAGGACACAGATACTGTGTGTATTAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045428.7 ENSMUST00000121871.8 |
||
| CDS-3UTR CCA 90 bp | TCTAATACACACAGTATCTGTGTCCTACTGACAAAGATCTCTGTTCAAATTTGTCAAAGATCAGGGATGTaGAATACTTCATTCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: SNTHSICVLLTKISVQICQRSGM*NTSFHL Trigger: GAGATGGAATGAAGTATTCCACATCCCTGATCTTTG...ACAAATTTGAACAGAGATCTTTGTCAGTAGGACACAGATACTGTGTGTATTAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045428.7 ENSMUST00000121871.8 |
||
| CDS-3UTR GCA 90 bp | TCTAATACACACAGTATCTGTGTCCTACTGACAAAGATCTCTGTTCAAATTTGTTTCCTCTTTGAAGAATaGCTCAAACTCTTCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SNTHSICVLLTKISVQICFLFEE*LKLFFI Trigger: TATGAAGAAGAGTTTGAGGCATTCTTCAAAGAGGAA...ACAAATTTGAACAGAGATCTTTGTCAGTAGGACACAGATACTGTGTGTATTAGA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045428.7 ENSMUST00000121871.8 |
||
| CDS-3UTR GCA 90 bp | TCTAATACACACAGTATCTGTGTCCTACTGACAAAGATCTCTGTTCAAATTTGTGTTAGATTTTTACAATaGTTGGCAATACGGATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SNTHSICVLLTKISVQICVRFLQ*LAIRMS Trigger: ACTCATCCGTATTGCCAAGCATTGTAAAAATCTAAC...ACAAATTTGAACAGAGATCTTTGTCAGTAGGACACAGATACTGTGTGTATTAGA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045428.7 ENSMUST00000121871.8 |
||
| CDS-3UTR CAA 90 bp | CCCAGGTGCTTAGAGACTTCAGTGTGGACTTCATCTGGGGTGTACCTGTCGTCAAACCACAACATAAAGTaGGGTCCCAGAAGCAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: PRCLETSVWTSSGVYLSSNHNIK*GPRSRT Trigger: AGTCCTGCTTCTGGGACCCAACTTTATGTTGTGGTT...TGACGACAGGTACACCCCAGATGAAGTCCACACTGAAGTCTCTAAGCACCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128668.8 |
||
| CDS-3UTR CAA 90 bp | ACAATTTACCAGCTGAGAAAGGATATCACAGGCGGCTTCTGCCGACTCAGTACTAACCACAACATAAAGTaGGGTCCCAGAAGCAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: TIYQLRKDITGGFCRLSTNHNIK*GPRSRT Trigger: AGTCCTGCTTCTGGGACCCAACTTTATGTTGTGGTT...AGTACTGAGTCGGCAGAAGCCGCCTGTGATATCCTTTCTCAGCTGGTAAATTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124981.2 ENSMUST00000128668.8 |
||
| CDS-3UTR CAA 90 bp | TCTAATACACACAGTATCTGTGTCCTACTGACAAAGATCTCTGTTCAAATTTGTGGACAGCTACTCATTTaGAGGAGTCGAAGGGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SNTHSICVLLTKISVQICGQLLI*RSRRVS Trigger: TGACACCCTTCGACTCCTCAAAATGAGTAGCTGTCC...ACAAATTTGAACAGAGATCTTTGTCAGTAGGACACAGATACTGTGTGTATTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045428.7 ENSMUST00000121871.8 |
||
| CDS-3UTR CAA 90 bp | TCTAATACACACAGTATCTGTGTCCTACTGACAAAGATCTCTGTTCAAATTTGTCGAAGGGTGTCACTGTaGTTAGCCACAAGAATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SNTHSICVLLTKISVQICRRVSL*LATRIF Trigger: GAAGATTCTTGTGGCTAACAACAGTGACACCCTTCG...ACAAATTTGAACAGAGATCTTTGTCAGTAGGACACAGATACTGTGTGTATTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045428.7 ENSMUST00000121871.8 |
||
| CDS-3UTR CAA 90 bp | TCTAATACACACAGTATCTGTGTCCTACTGACAAAGATCTCTGTTCAAATTTGTACGGGGGTTTCCTCTTaGAAGAATGCCTCAAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: SNTHSICVLLTKISVQICTGVSS*KNASNS Trigger: AGAGTTTGAGGCATTCTTCAAAGAGGAAACCCCCGT...ACAAATTTGAACAGAGATCTTTGTCAGTAGGACACAGATACTGTGTGTATTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045428.7 ENSMUST00000121871.8 |
||
| CDS-3UTR CAA 90 bp | TCTAATACACACAGTATCTGTGTCCTACTGACAAAGATCTCTGTTCAAATTTGTCTTTTTGATGATCTGTaGAATGAGGTCGGGATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SNTHSICVLLTKISVQICLFDDL*NEVGMS Trigger: ACTCATCCCGACCTCATTCAACAGATCATCAAAAAG...ACAAATTTGAACAGAGATCTTTGTCAGTAGGACACAGATACTGTGTGTATTAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045428.7 ENSMUST00000121871.8 |
||
| CDS-3UTR CAA 90 bp | TCTAATACACACAGTATCTGTGTCCTACTGACAAAGATCTCTGTTCAAATTTGTTTCATGAAACTTGGTTaGGCTGTTGAAATCAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: SNTHSICVLLTKISVQICFMKLG*AVEINP Trigger: GGGATTGATTTCAACAGCCAAACCAAGTTTCATGAA...ACAAATTTGAACAGAGATCTTTGTCAGTAGGACACAGATACTGTGTGTATTAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045428.7 ENSMUST00000121871.8 |
||