RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXL20 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020883

Ensembl transcript IDs: ENSMUST00000103143.10, ENSMUST00000147971.2, ENSMUST00000149327.3, ENSMUST00000150378.8

Found 246 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGAAGTCCAGGTCAGGCCCAGCAGCTAGGCACAGGGATCACACCGTaGCTGCCCTGCTACCCCTCAGGGAGTCAGCGGAGTGGGGGTGCA +
Preference number: 1 (lower is better)
Translates to: RSPGQAQQLGTGITP*LPCYPSGSQRSGGA
Trigger: TGCACCCCCACTCCGCTGACTCCCTGAGGGGTAGCAGGGCAGTCACGGTGTGATCCCTGTGCCTAGCTGCTGGGCCTGACCTGGACTTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 90 bp GGCCACACCCACCGCCTGCTGGCACAGGACACACCCACCGCCTGCTaGCACAGGATACTGGTCATTTGTGCTGGAGCTTGGGTAGCCGGG +
Preference number: 1 (lower is better)
Translates to: GHTHRLLAQDTPTAC*HRILVICAGAWVAG
Trigger: CCCGGCTACCCAAGCTCCAGCACAAATGACCAGTATCCTGTGCCAGCAGGCGGTGGGTGTGTCCTGTGCCAGCAGGCGGTGGGTGTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 90 bp GTCCCTGAGCGGCCTGACCGGAAGGGGGTGGTCCTCACAGTGCTCTaGGCTCTGCACAGGCCACATGGGATACTCAGGTCTGTGCCCTCA +
Preference number: 1 (lower is better)
Translates to: VPERPDRKGVVLTVL*ALHRPHGILRSVPS
Trigger: TGAGGGCACAGACCTGAGTATCCCATGTGGCCTGTGCAGAGCTCAGAGCACTGTGAGGACCACCCCCTTCCGGTCAGGCCGCTCAGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 90 bp AGCGGCCTGACCGGAAGGGGGTGGTCCTCACAGTGCTCTGAGCTCTaGACAGGCCACATGGGATACTCAGGTCTGTGCCCTCAGGGTCAC +
Preference number: 1 (lower is better)
Translates to: SGLTGRGWSSQCSEL*TGHMGYSGLCPQGH
Trigger: GTGACCCTGAGGGCACAGACCTGAGTATCCCATGTGGCCTGTGCAGAGCTCAGAGCACTGTGAGGACCACCCCCTTCCGGTCAGGCCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 90 bp CATCTGTCCCTGAGCGGCCTGACCGGAAGGGGGTGGTCCTCACAGTaGTCTGAGCTCTGCACAGGCCACATGGGATACTCAGGTCTGTGC +
Preference number: 1 (lower is better)
Translates to: HLSLSGLTGRGWSSQ*SELCTGHMGYSGLC
Trigger: GCACAGACCTGAGTATCCCATGTGGCCTGTGCAGAGCTCAGAGCACTGTGAGGACCACCCCCTTCCGGTCAGGCCGCTCAGGGACAGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 90 bp CTACCCCTCAGGGAGTCAGCGGAGTGGGGGTGCAGGACTGGAGACTaGGTTCTGCAGACAGCACCAGGTACCCATCCATCTGTCCCTGAG +
Preference number: 1 (lower is better)
Translates to: LPLRESAEWGCRTGD*VLQTAPGTHPSVPE
Trigger: CTCAGGGACAGATGGATGGGTACCTGGTGCTGTCTGCAGAACTCAGTCTCCAGTCCTGCACCCCCACTCCGCTGACTCCCTGAGGGGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 90 bp TGTGCGGCTCTGGGGATCTGGACGCTGCCCTCACTTTGTAACCCTTaGCCAGAATGCTGGGGTCGCTTCCACCGGAGAGACTCCACGGTA +
Preference number: 1 (lower is better)
Translates to: CAALGIWTLPSLCNP*PECWGRFHRRDSTV
Trigger: TACCGTGGAGTCTCTCCGGTGGAAGCGACCCCAGCATTCTGGGCAAGGGTTACAAAGTGAGGGCAGCGTCCAGATCCCCAGAGCCGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 90 bp AGGACGCCTGTGCCTGTGTATGTGCGGCTCTGGGGATCTGGACGCTaGCCTCACTTTGTAACCCTTGCCCAGAATGCTGGGGTCGCTTCC +
Preference number: 1 (lower is better)
Translates to: RTPVPVYVRLWGSGR*PHFVTLAQNAGVAS
Trigger: GGAAGCGACCCCAGCATTCTGGGCAAGGGTTACAAAGTGAGGGCAGCGTCCAGATCCCCAGAGCCGCACATACACAGGCACAGGCGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 90 bp GGCATGAACTTCAGAGCCATGGTCCCAGAACCACAGCAGATGGGGTaGGGACGCCTGTGCCTGTGTATGTGCGGCTCTGGGGATCTGGAC +
Preference number: 1 (lower is better)
Translates to: GMNFRAMVPEPQQMG*GRLCLCMCGSGDLD
Trigger: GTCCAGATCCCCAGAGCCGCACATACACAGGCACAGGCGTCCTCACCCCATCTGCTGTGGTTCTGGGACCATGGCTCTGAAGTTCATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 90 bp GACAGAGAGAGAGACAGAGAGAGCGCGAGCGAGCGCGGGTGGCAGTaGGCGAGAGAACCGGGTGCAGTGACATACAGTGACAAACTGAGC +
Preference number: 1 (lower is better)
Translates to: DRERDRESASERGWQ*AREPGAVTYSDKLS
Trigger: GCTCAGTTTGTCACTGTATGTCACTGCACCCGGTTCTCTCGCTCACTGCCACCCGCGCTCGCTCGCGCTCTCTCTGTCTCTCTCTCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 90 bp CCTCAGGCTTCTGGCGGATTTTCCTGCCTCCGCCCACCACCCATCTaGCAACAGGAGTGCTGGTATCAGACTCACAGCCCCCAATCAGCT +
Preference number: 1 (lower is better)
Translates to: PQASGGFSCLRPPPI*QQECWYQTHSPQSA
Trigger: AGCTGATTGGGGGCTGTGAGTCTGATACCAGCACTCCTGTTGGCAGATGGGTGGTGGGCGGAGGCAGGAAAATCCGCCAGAAGCCTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 90 bp CCCACCGCCTGCTGGCACAGGATACTGGTCATTTGTGCTGGAGCTTaGGTAGCCGGGAATCCAGGCTCAGCTTGGGATTCATCACCCACC +
Preference number: 1 (lower is better)
Translates to: PTACWHRILVICAGA*VAGNPGSAWDSSPT
Trigger: GGTGGGTGATGAATCCCAAGCTGAGCCTGGATTCCCGGCTACCCAAGCTCCAGCACAAATGACCAGTATCCTGTGCCAGCAGGCGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 90 bp ACAGGACACACCCACCGCCTGCTGGCACAGGATACTGGTCATTTGTaGTGGAGCTTGGGTAGCCGGGAATCCAGGCTCAGCTTGGGATTC +
Preference number: 1 (lower is better)
Translates to: TGHTHRLLAQDTGHL*WSLGSRESRLSLGF
Trigger: GAATCCCAAGCTGAGCCTGGATTCCCGGCTACCCAAGCTCCAGCACAAATGACCAGTATCCTGTGCCAGCAGGCGGTGGGTGTGTCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 90 bp GGACACACCCACCGCCTGCTGGCACAGGATACTGGTCATTTGTGCTaGAGCTTGGGTAGCCGGGAATCCAGGCTCAGCTTGGGATTCATC +
Preference number: 1 (lower is better)
Translates to: GHTHRLLAQDTGHLC*SLGSRESRLSLGFI
Trigger: GATGAATCCCAAGCTGAGCCTGGATTCCCGGCTACCCAAGCTCCAGCACAAATGACCAGTATCCTGTGCCAGCAGGCGGTGGGTGTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 90 bp CTGGGGATCTGGACGCTGCCCTCACTTTGTAACCCTTGCCCAGAATaGTGGGGTCGCTTCCACCGGAGAGACTCCACGGTATGTCTAGAA +
Preference number: 1 (lower is better)
Translates to: LGIWTLPSLCNPCPE*WGRFHRRDSTVCLE
Trigger: TTCTAGACATACCGTGGAGTCTCTCCGGTGGAAGCGACCCCAGCATTCTGGGCAAGGGTTACAAAGTGAGGGCAGCGTCCAGATCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 90 bp GGGATCTGGACGCTGCCCTCACTTTGTAACCCTTGCCCAGAATGCTaGGGTCGCTTCCACCGGAGAGACTCCACGGTATGTCTAGAAGTG +
Preference number: 1 (lower is better)
Translates to: GIWTLPSLCNPCPEC*GRFHRRDSTVCLEV
Trigger: CACTTCTAGACATACCGTGGAGTCTCTCCGGTGGAAGCGACCCCAGCATTCTGGGCAAGGGTTACAAAGTGAGGGCAGCGTCCAGATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 90 bp CAGGTCTGTGCCCTCAGGGTCACTGGAAGGTGGGCAAGGCTAAGCTaGACACCAGGAAACAGTAACCGCAAAGAGTTCCTGGGAGGAAGA +
Preference number: 1 (lower is better)
Translates to: QVCALRVTGRWARLS*TPGNSNRKEFLGGR
Trigger: TCTTCCTCCCAGGAACTCTTTGCGGTTACTGTTTCCTGGTGTTCAGCTTAGCCTTGCCCACCTTCCAGTGACCCTGAGGGCACAGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 90 bp CGACAGCTTGCTGTGAGCAGGGAAAGGAATCCAAGGATGCTAGACTaGATGCCACAATGCTTTAGACACAGGGCAGGGCGGGTGCTGGAA +
Preference number: 1 (lower is better)
Translates to: RQLAVSRERNPRMLD*MPQCFRHRAGRVLE
Trigger: TTCCAGCACCCGCCCTGCCCTGTGTCTAAAGCATTGTGGCATCCAGTCTAGCATCCTTGGATTCCTTTCCCTGCTCACAGCAAGCTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 90 bp TTACCTGCCGAGCCATCTCAACAGTCCAAGGTCAGTCATGATCTATaGGGCCTTCCAAGTCTCAATGCCCACGGACAGGCAGGGAGTCTC +
Preference number: 1 (lower is better)
Translates to: LPAEPSQQSKVSHDL*GLPSLNAHGQAGSL
Trigger: GAGACTCCCTGCCTGTCCGTGGGCATTGAGACTTGGAAGGCCTCATAGATCATGACTGACCTTGGACTGTTGAGATGGCTCGGCAGGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 90 bp ACAGTGCTTACCTGCCGAGCCATCTCAACAGTCCAAGGTCAGTCATaGTCTATGAGGCCTTCCAAGTCTCAATGCCCACGGACAGGCAGG +
Preference number: 1 (lower is better)
Translates to: TVLTCRAISTVQGQS*SMRPSKSQCPRTGR
Trigger: CCTGCCTGTCCGTGGGCATTGAGACTTGGAAGGCCTCATAGATCATGACTGACCTTGGACTGTTGAGATGGCTCGGCAGGTAAGCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 90 bp GTGAGCAGGGAAAGGAATCCAAGGATGCTAGACTGGATGCCACAATaGTTTAGACACAGGGCAGGGCGGGTGCTGGAAGAACTGGAGAGA +
Preference number: 1 (lower is better)
Translates to: VSRERNPRMLDWMPQ*FRHRAGRVLEELER
Trigger: TCTCTCCAGTTCTTCCAGCACCCGCCCTGCCCTGTGTCTAAAGCATTGTGGCATCCAGTCTAGCATCCTTGGATTCCTTTCCCTGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 90 bp GCCGGCATTACCGCTCCTTCACCATCACAAACAGGTTGTCAGACTTaGCCTGCAAACAGTGCTTACCTGCCGAGCCATCTCAACAGTCCA +
Preference number: 1 (lower is better)
Translates to: AGITAPSPSQTGCQT*PANSAYLPSHLNSP
Trigger: TGGACTGTTGAGATGGCTCGGCAGGTAAGCACTGTTTGCAGGCCAAGTCTGACAACCTGTTTGTGATGGTGAAGGAGCGGTAATGCCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 90 bp GTAACACTGGGCTCTGCTGGAATGTCCCCTCCCTCTACCGTGGCCTaGGATTGTTTCTGGGCATGTCCAACAGGAATGCTTAGGTTTTAC +
Preference number: 1 (lower is better)
Translates to: VTLGSAGMSPPSTVA*DCFWACPTGMLRFY
Trigger: GTAAAACCTAAGCATTCCTGTTGGACATGCCCAGAAACAATCGCAGGCCACGGTAGAGGGAGGGGACATTCCAGCAGAGCCCAGTGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 90 bp GGTCTAATAAAGCGGCAGCAGCAAATGGGGGCAGGATATTCCAGATaGCGCAGGGGAGCGGAGCCTACAATGGACGTTGTCTATTCAAGA +
Preference number: 1 (lower is better)
Translates to: GLIKRQQQMGAGYSR*RRGAEPTMDVVYSR
Trigger: TCTTGAATAGACAACGTCCATTGTAGGCTCCGCTCCCCTGCGTCATCTGGAATATCCTGCCCCCATTTGCTGCTGCCGCTTTATTAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 90 bp GAGATGCAGAAACGATGTGCAGAGAAATCAGAGCGCACAACACTGTaGACCAGGCTCCAATGGGAAACCCCAGAAGCTCTGTCTCCTGTC +
Preference number: 1 (lower is better)
Translates to: EMQKRCAEKSERTTL*TRLQWETPEALSPV
Trigger: GACAGGAGACAGAGCTTCTGGGGTTTCCCATTGGAGCCTGGTTCACAGTGTTGTGCGCTCTGATTTCTCTGCACATCGTTTCTGCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 90 bp TCTGCTGGAATGTCCCCTCCCTCTACCGTGGCCTGCGATTGTTTCTaGGCATGTCCAACAGGAATGCTTAGGTTTTACCAACCCACTTGT +
Preference number: 1 (lower is better)
Translates to: SAGMSPPSTVACDCF*ACPTGMLRFYQPTC
Trigger: ACAAGTGGGTTGGTAAAACCTAAGCATTCCTGTTGGACATGCCCAGAAACAATCGCAGGCCACGGTAGAGGGAGGGGACATTCCAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 90 bp CAGGCTCCAATGGGAAACCCCAGAAGCTCTGTCTCCTGTCTCCTGTaGTTTCCAGCAGGTAAAAAGAATAAGGCAGGGTTACAGCAGCCA +
Preference number: 1 (lower is better)
Translates to: QAPMGNPRSSVSCLL*FPAGKKNKAGLQQP
Trigger: TGGCTGCTGTAACCCTGCCTTATTCTTTTTACCTGCTGGAAACCACAGGAGACAGGAGACAGAGCTTCTGGGGTTTCCCATTGGAGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 90 bp CCCTCATCCCTCCTTTTGACTCGTGTTCTTGGCCTAGAAAGGTGGTaGTTTGCCTTACCAGCAGGGGTCACCAAGACAAAGCCAACAAAC +
Preference number: 1 (lower is better)
Translates to: PSSLLLTRVLGLERW*FALPAGVTKTKPTN
Trigger: GTTTGTTGGCTTTGTCTTGGTGACCCCTGCTGGTAAGGCAAATCACCACCTTTCTAGGCCAAGAACACGAGTCAAAAGGAGGGATGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 90 bp ATCCCTCCTTTTGACTCGTGTTCTTGGCCTAGAAAGGTGGTGATTTaGCTTACCAGCAGGGGTCACCAAGACAAAGCCAACAAACCTGCG +
Preference number: 1 (lower is better)
Translates to: IPPFDSCSWPRKVVI*LTSRGHQDKANKPA
Trigger: CGCAGGTTTGTTGGCTTTGTCTTGGTGACCCCTGCTGGTAAGGCAAATCACCACCTTTCTAGGCCAAGAACACGAGTCAAAAGGAGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 90 bp GCTGGCACTTGGATTCAGAGGTCAGTGCTTCTCTATGCTCCTCTATaGATGATGGGCCTGCGTTACTTAAGAAAGGAATATGACGCCCGC +
Preference number: 1 (lower is better)
Translates to: AGTWIQRSVLLYAPL*MMGLRYLRKEYDAR
Trigger: GCGGGCGTCATATTCCTTTCTTAAGTAACGCAGGCCCATCATGCATAGAGGAGCATAGAGAAGCACTGACCTCTGAATCCAAGTGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 90 bp GCATGTCAGCACGGGAACAAGGAAGCCCACGAGTCTCCCAATGGATaGCTACCATTTCTAGGATGTGGAGAAGTTTTCTTTCTGGTCCCT +
Preference number: 1 (lower is better)
Translates to: ACQHGNKEAHESPNG*LPFLGCGEVFFLVP
Trigger: AGGGACCAGAAAGAAAACTTCTCCACATCCTAGAAATGGTAGCCATCCATTGGGAGACTCGTGGGCTTCCTTGTTCCCGTGCTGACATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 90 bp TCCTTCACCATCACAAACAGGTTGTCAGACTTGGCCTGCAAACAGTaGTTACCTGCCGAGCCATCTCAACAGTCCAAGGTCAGTCATGAT +
Preference number: 1 (lower is better)
Translates to: SFTITNRLSDLACKQ*LPAEPSQQSKVSHD
Trigger: ATCATGACTGACCTTGGACTGTTGAGATGGCTCGGCAGGTAAGCACTGTTTGCAGGCCAAGTCTGACAACCTGTTTGTGATGGTGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 90 bp ACTCTCCCTCTTTTATATCCATACTGTGAAGTGCAGGCACGTACATaGCACACCTTGTATGGAGGTCACAGGACAATTCTCCCTCCACAC +
Preference number: 1 (lower is better)
Translates to: TLPLLYPYCEVQART*HTLYGGHRTILPPH
Trigger: GTGTGGAGGGAGAATTGTCCTGTGACCTCCATACAAGGTGTGGCATGTACGTGCCTGCACTTCACAGTATGGATATAAAAGAGGGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 90 bp GCACAAACCACTATACCTCACTCTCCCTCTTTTATATCCATACTGTaGAGTGCAGGCACGTACATGCCACACCTTGTATGGAGGTCACAG +
Preference number: 1 (lower is better)
Translates to: AQTTIPHSPSFISIL*SAGTYMPHLVWRSQ
Trigger: CTGTGACCTCCATACAAGGTGTGGCATGTACGTGCCTGCACTTCACAGTATGGATATAAAAGAGGGAGAGTGAGGTATAGTGGTTTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 90 bp GAATCCAGGCTCAGCTTGGGATTCATCACCCACCCTACACACTGCTaGACTTCTCTTGTAAGCTCAGTGAGTTTAGAAGGAAGGAAATGT +
Preference number: 1 (lower is better)
Translates to: ESRLSLGFITHPTHC*TSLVSSVSLEGRKC
Trigger: ACATTTCCTTCCTTCTAAACTCACTGAGCTTACAAGAGAAGTGCAGCAGTGTGTAGGGTGGGTGATGAATCCCAAGCTGAGCCTGGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 90 bp CCCTATCCAATTCTTACAAGTATTCCGCATGTGGGAGCTGGCACTTaGATTCAGAGGTCAGTGCTTCTCTATGCTCCTCTATGCATGATG +
Preference number: 1 (lower is better)
Translates to: PYPILTSIPHVGAGT*IQRSVLLYAPLCMM
Trigger: CATCATGCATAGAGGAGCATAGAGAAGCACTGACCTCTGAATCCAAGTGCCAGCTCCCACATGCGGAATACTTGTAAGAATTGGATAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 90 bp TTCTCCCATTCTCTGTGTGTTTCTCTGAAGAGGCTTTTTCTTGACTaGGCCATAGGTACTAACCTTGTTCCCTCTGCTCTGGTGTCAGGT +
Preference number: 1 (lower is better)
Translates to: FSHSLCVSLKRLFLD*AIGTNLVPSALVSG
Trigger: ACCTGACACCAGAGCAGAGGGAACAAGGTTAGTACCTATGGCTCAGTCAAGAAAAAGCCTCTTCAGAGAAACACACAGAGAATGGGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 90 bp AACCACTATACCTCACTCTCCCTCTTTTATATCCATACTGTGAAGTaGAGGCACGTACATGCCACACCTTGTATGGAGGTCACAGGACAA +
Preference number: 1 (lower is better)
Translates to: NHYTSLSLFYIHTVK*RHVHATPCMEVTGQ
Trigger: TTGTCCTGTGACCTCCATACAAGGTGTGGCATGTACGTGCCTGCACTTCACAGTATGGATATAAAAGAGGGAGAGTGAGGTATAGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 90 bp ACCAAAACCCTATCCAATTCTTACAAGTATTCCGCATGTGGGAGCTaGCACTTGGATTCAGAGGTCAGTGCTTCTCTATGCTCCTCTATG +
Preference number: 1 (lower is better)
Translates to: TKTLSNSYKYSACGS*HLDSEVSASLCSSM
Trigger: CATAGAGGAGCATAGAGAAGCACTGACCTCTGAATCCAAGTGCCAGCTCCCACATGCGGAATACTTGTAAGAATTGGATAGGGTTTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 90 bp GGAAGCCCACGAGTCTCCCAATGGATGGCTACCATTTCTAGGATGTaGAGAAGTTTTCTTTCTGGTCCCTGGATAAATCATATATTGTTT +
Preference number: 1 (lower is better)
Translates to: GSPRVSQWMATISRM*RSFLSGPWINHILF
Trigger: AAACAATATATGATTTATCCAGGGACCAGAAAGAAAACTTCTCCACATCCTAGAAATGGTAGCCATCCATTGGGAGACTCGTGGGCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 90 bp TCAAATAGACTTCAAATAGTCTACACAGCTACAAATAGTCCAGACTaGACGTCAGTGGCCCACAGCTACAACAAACATTCCAAACGGTAC +
Preference number: 1 (lower is better)
Translates to: SNRLQIVYTATNSPD*TSVAHSYNKHSKRY
Trigger: GTACCGTTTGGAATGTTTGTTGTAGCTGTGGGCCACTGACGTCCAGTCTGGACTATTTGTAGCTGTGTAGACTATTTGAAGTCTATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 90 bp ATGGCTACCATTTCTAGGATGTGGAGAAGTTTTCTTTCTGGTCCCTaGATAAATCATATATTGTTTTCCATGCTACCTCTCACCTTGGAG +
Preference number: 1 (lower is better)
Translates to: MATISRMWRSFLSGP*INHILFSMLPLTLE
Trigger: CTCCAAGGTGAGAGGTAGCATGGAAAACAATATATGATTTATCCAGGGACCAGAAAGAAAACTTCTCCACATCCTAGAAATGGTAGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 90 bp TTCTACAGTAATGAGAAATCCATCAGACTTTCTTCCTATATATTCTaGCAGAACCTGCACCTATGGCATGAAACAGCCCTCCCTTTTAAC +
Preference number: 1 (lower is better)
Translates to: FYSNEKSIRLSSYIF*QNLHLWHETALPFN
Trigger: GTTAAAAGGGAGGGCTGTTTCATGCCATAGGTGCAGGTTCTGTCAGAATATATAGGAAGAAAGTCTGATGGATTTCTCATTACTGTAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 90 bp TTTTGTTTGAAAGACCTAGGGTATCTACATTTGCAAGTGTGTATGTaGGCTAGTGTGCCTAACTTTATAATCCTAGCAGTAAGGAGGCCA +
Preference number: 1 (lower is better)
Translates to: FCLKDLGYLHLQVCM*ASVPNFIILAVRRP
Trigger: TGGCCTCCTTACTGCTAGGATTATAAAGTTAGGCACACTAGCTCACATACACACTTGCAAATGTAGATACCCTAGGTCTTTCAAACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 90 bp ATAACTTTCTTAAACTCCCATTCAAGGGAGAGGATGCTAAATAACTaGGAGTTTTCCAGAGATGCAGAAACGATGTGCAGAGAAATCAGA +
Preference number: 1 (lower is better)
Translates to: ITFLNSHSRERMLNN*EFSRDAETMCREIR
Trigger: TCTGATTTCTCTGCACATCGTTTCTGCATCTCTGGAAAACTCTCAGTTATTTAGCATCCTCTCCCTTGAATGGGAGTTTAAGAAAGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR TCA 90 bp CGCTTCCTGAGGCAAAGCATCTCCTCACGAGCCTTGCCTGCCCATGCCATACAGGAAAGGCTGTCAGGGTaGGGGCAGGGCCAGTCACCG +
Preference number: 2 (lower is better)
Translates to: RFLRQSISSRALPAHAIQERLSG*GQGQSP
Trigger: CGGTGACTGGCCCTGCCCTCACCCTGACAGCCTTTC...CTGTATGGCATGGGCAGGCAAGGCTCGTGAGGAGATGCTTTGCCTCAGGAAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CAA 90 bp GGCACAGGACACACCCACCGCCTGCTGGCACAGGATACTGGTCATTaGTGCTGGAGCTTGGGTAGCCGGGAATCCAGGCTCAGCTTGGGA +
Preference number: 2 (lower is better)
Translates to: GTGHTHRLLAQDTGH*CWSLGSRESRLSLG
Trigger: TCCCAAGCTGAGCCTGGATTCCCGGCTACCCAAGCTCCAGCACAAATGACCAGTATCCTGTGCCAGCAGGCGGTGGGTGTGTCCTGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR TCA 90 bp TGCCAGGGTCACAGGCTTGCACACTCAGGTCCCAAAAGCCCCTCTCCCAATACTCCACAGCAGATGGGGTaGGGACGCCTGTGCCTGTGT +
Preference number: 2 (lower is better)
Translates to: CQGHRLAHSGPKSPSPNTPQQMG*GRLCLC
Trigger: ACACAGGCACAGGCGTCCTCACCCCATCTGCTGTGG...AGTATTGGGAGAGGGGCTTTTGGGACCTGAGTGTGCAAGCCTGTGACCCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR TCA 90 bp CCCACCACCCATCTGCCAACAGGAGTGCTGGTATCAGACTCACAGCCCCCAATCAGCCTTGGTAGACTCTaGGCCCCCACTCCCTCTCTG +
Preference number: 2 (lower is better)
Translates to: PTTHLPTGVLVSDSQPPISLGRL*APTPSL
Trigger: CAGAGAGGGAGTGGGGGCTCAGAGTCTACCAAGGCT...GATTGGGGGCTGTGAGTCTGATACCAGCACTCCTGTTGGCAGATGGGTGGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CAA 90 bp ACCCACCGCCTGCTGGCACAGGATACTGGTCATTTGTGCTGGAGCTaGGGTAGCCGGGAATCCAGGCTCAGCTTGGGATTCATCACCCAC +
Preference number: 2 (lower is better)
Translates to: THRLLAQDTGHLCWS*GSRESRLSLGFITH
Trigger: GTGGGTGATGAATCCCAAGCTGAGCCTGGATTCCCGGCTACCCAAGCTCCAGCACAAATGACCAGTATCCTGTGCCAGCAGGCGGTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR GCA 90 bp GGTTGTCCTGGTTCTTGGGGTCAGTTCTGGGGTTACAGCAGGGAGGAAGAGCTGGTGCGGCCAGAGCTGTaGATCAGCAGACCCCTCATC +
Preference number: 2 (lower is better)
Translates to: GCPGSWGQFWGYSREEELVRPEL*ISRPLI
Trigger: GATGAGGGGTCTGCTGATGCACAGCTCTGGCCGCAC...CAGCTCTTCCTCCCTGCTGTAACCCCAGAACTGACCCCAAGAACCAGGACAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR GCA 90 bp GGTCAGGTACAGGCAGCAGCCCTCCAGCCTCTGCATCTCCTGTGTCGAGATATACTGTGCCTGTGTATGTaGGGCTCTGGGGATCTGGAC +
Preference number: 2 (lower is better)
Translates to: GQVQAAALQPLHLLCRDILCLCM*GSGDLD
Trigger: GTCCAGATCCCCAGAGCCGCACATACACAGGCACAG...TATATCTCGACACAGGAGATGCAGAGGCTGGAGGGCTGCTGCCTGTACCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR TCA 90 bp CGCTTCCTGAGGCAAAGCATCTCCTCACGAGCCTTGCCTGCCCATGCCATACAGTTCATGTCCCCTTTCTaGGGAAGTCTGCAGAGACAG +
Preference number: 2 (lower is better)
Translates to: RFLRQSISSRALPAHAIQFMSPF*GSLQRQ
Trigger: CTGTCTCTGCAGACTTCCTCAGAAAGGGGACATGAA...CTGTATGGCATGGGCAGGCAAGGCTCGTGAGGAGATGCTTTGCCTCAGGAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR GCA 90 bp GGTTGTCCTGGTTCTTGGGGTCAGTTCTGGGGTTACAGCAGGGAGGAAGAGCTGCAGAGACCAAAGACCTaGAGGAGGATGTTCTCCTCG +
Preference number: 2 (lower is better)
Translates to: GCPGSWGQFWGYSREEELQRPKT*RRMFSS
Trigger: CGAGGAGAACATCCTCCTGCAGGTCTTTGGTCTCTG...CAGCTCTTCCTCCCTGCTGTAACCCCAGAACTGACCCCAAGAACCAGGACAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR CCA 90 bp AGCCCTCCAGCCTCTGCATCTCCTGTGTCGAGATATAGGCACAAACCACTATACGCGGCTCTGGGGATCTaGACGCTGCCCTCACTTTGT +
Preference number: 2 (lower is better)
Translates to: SPPASASPVSRYRHKPLYAALGI*TLPSLC
Trigger: ACAAAGTGAGGGCAGCGTCCAGATCCCCAGAGCCGC...GTATAGTGGTTTGTGCCTATATCTCGACACAGGAGATGCAGAGGCTGGAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CAA 90 bp CCCTTCCAAGGGGGAGGACTGTTGTCCACTGTCCACACTCCTGTCTaGGTACTAATGCTGTCCCCAGAAGTAAGGAAGCCCTTCTTGCCA +
Preference number: 2 (lower is better)
Translates to: PFQGGGLLSTVHTPV*VLMLSPEVRKPFLP
Trigger: TGGCAAGAAGGGCTTCCTTACTTCTGGGGACAGCATTAGTACCAAGACAGGAGTGTGGACAGTGGACAACAGTCCTCCCCCTTGGAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR TCA 90 bp CTAGCAGTAAGGAGGCCAAGACAAGATTCCAGGCCAGCCAGAGCTACAGAGTATGAGTGGGCAGCATCCTaGGGACAGACTGAAGGAGAG +
Preference number: 2 (lower is better)
Translates to: LAVRRPRQDSRPARATEYEWAAS*GQTEGE
Trigger: CTCTCCTTCAGTCTGTCCTCAGGATGCTGCCCACTC...ATACTCTGTAGCTCTGGCTGGCCTGGAATCTTGTCTTGGCCTCCTTACTGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR GCA 90 bp GGTCAGGTACAGGCAGCAGCCCTCCAGCCTCTGCATCTCCTGTGTCGAGATATACTTTCTGAGGAAGTCTaGAGAGACAGCGGAGATGCT +
Preference number: 2 (lower is better)
Translates to: GQVQAAALQPLHLLCRDILSEEV*RDSGDA
Trigger: AGCATCTCCGCTGTCTCTGCAGACTTCCTCAGAAAG...TATATCTCGACACAGGAGATGCAGAGGCTGGAGGGCTGCTGCCTGTACCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR GCA 90 bp GAAGCTCTGTCTCCTGTCTCCTGTGGTTTCCAGCAGGTAAAAAGAATAAGGCAGTCTGGGCTCTCTGGCTaGCCCAGTGCTCCTAGCTGG +
Preference number: 2 (lower is better)
Translates to: EALSPVSCGFQQVKRIRQSGLSG*PSAPSW
Trigger: CCAGCTAGGAGCACTGGGGCAGCCAGAGAGCCCAGA...CTGCCTTATTCTTTTTACCTGCTGGAAACCACAGGAGACAGGAGACAGAGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR GCA 90 bp CCCACCACCCATCTGCCAACAGGAGTGCTGGTATCAGACTCACAGCCCCCAATCGTCAGTGCTTCTCTATaGTCCTCTATGCATGATGGG +
Preference number: 2 (lower is better)
Translates to: PTTHLPTGVLVSDSQPPIVSASL*SSMHDG
Trigger: CCCATCATGCATAGAGGAGCATAGAGAAGCACTGAC...GATTGGGGGCTGTGAGTCTGATACCAGCACTCCTGTTGGCAGATGGGTGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR GCA 90 bp CGCTTCCTGAGGCAAAGCATCTCCTCACGAGCCTTGCCTGCCCATGCCATACAGGCGACACTAGGTTTCTaGCTGCTCATGGTTCTTGTT +
Preference number: 2 (lower is better)
Translates to: RFLRQSISSRALPAHAIQATLGF*LLMVLV
Trigger: AACAAGAACCATGAGCAGGCAGAAACCTAGTGTCGC...CTGTATGGCATGGGCAGGCAAGGCTCGTGAGGAGATGCTTTGCCTCAGGAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR CCA 90 bp CGCTTCCTGAGGCAAAGCATCTCCTCACGAGCCTTGCCTGCCCATGCCATACAGACAGGTTGTCAGACTTaGCCTGCAAACAGTGCTTAC +
Preference number: 2 (lower is better)
Translates to: RFLRQSISSRALPAHAIQTGCQT*PANSAY
Trigger: GTAAGCACTGTTTGCAGGCCAAGTCTGACAACCTGT...CTGTATGGCATGGGCAGGCAAGGCTCGTGAGGAGATGCTTTGCCTCAGGAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR CCA 90 bp CGCTTCCTGAGGCAAAGCATCTCCTCACGAGCCTTGCCTGCCCATGCCATACAGCCCATGGTACATCCGTaGAAGTCACAACAATTCCCA +
Preference number: 2 (lower is better)
Translates to: RFLRQSISSRALPAHAIQPMVHP*KSQQFP
Trigger: TGGGAATTGTTGTGACTTCCACGGATGTACCATGGG...CTGTATGGCATGGGCAGGCAAGGCTCGTGAGGAGATGCTTTGCCTCAGGAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR TCA 90 bp CGCTTCCTGAGGCAAAGCATCTCCTCACGAGCCTTGCCTGCCCATGCCATACAGCGAGGGCCTTCCATCTaGTTGTTTTCTACAGTAATG +
Preference number: 2 (lower is better)
Translates to: RFLRQSISSRALPAHAIQRGPSI*LFSTVM
Trigger: CATTACTGTAGAAAACAATCAGATGGAAGGCCCTCG...CTGTATGGCATGGGCAGGCAAGGCTCGTGAGGAGATGCTTTGCCTCAGGAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR GCA 90 bp GGTTGTCCTGGTTCTTGGGGTCAGTTCTGGGGTTACAGCAGGGAGGAAGAGCTGCTTGTCAGTGTTATGTaGTCCAGGTTGGAGATGGAG +
Preference number: 2 (lower is better)
Translates to: GCPGSWGQFWGYSREEELLVSVM*SRLEME
Trigger: CTCCATCTCCAACCTGGAGCACATAACACTGACAAG...CAGCTCTTCCTCCCTGCTGTAACCCCAGAACTGACCCCAAGAACCAGGACAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR TCA 90 bp CTAGCAGTAAGGAGGCCAAGACAAGATTCCAGGCCAGCCAGAGCTACAGAGTATTTGTTACAGCCGGCATaGACTTCAGAGCCATGGTCC +
Preference number: 2 (lower is better)
Translates to: LAVRRPRQDSRPARATEYLLQPA*TSEPWS
Trigger: GGACCATGGCTCTGAAGTTCATGCCGGCTGTAACAA...ATACTCTGTAGCTCTGGCTGGCCTGGAATCTTGTCTTGGCCTCCTTACTGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR TCA 90 bp CCCACCACCCATCTGCCAACAGGAGTGCTGGTATCAGACTCACAGCCCCCAATCTTGCAAGTGTGTATGTaGGCTAGTGTGCCTAACTTT +
Preference number: 2 (lower is better)
Translates to: PTTHLPTGVLVSDSQPPILQVCM*ASVPNF
Trigger: AAAGTTAGGCACACTAGCTCACATACACACTTGCAA...GATTGGGGGCTGTGAGTCTGATACCAGCACTCCTGTTGGCAGATGGGTGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR GCA 90 bp CTAGCAGTAAGGAGGCCAAGACAAGATTCCAGGCCAGCCAGAGCTACAGAGTATGTGCTCCTAGCTGGCTaGTTTCATGTCCCCTTTCTG +
Preference number: 2 (lower is better)
Translates to: LAVRRPRQDSRPARATEYVLLAG*FHVPFL
Trigger: CAGAAAGGGGACATGAAAGCAGCCAGCTAGGAGCAC...ATACTCTGTAGCTCTGGCTGGCCTGGAATCTTGTCTTGGCCTCCTTACTGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR CCA 90 bp GGTTGTCCTGGTTCTTGGGGTCAGTTCTGGGGTTACAGCAGGGAGGAAGAGCTGCCAAGGATGCTAGACTaGATGCCACAATGCTTTAGA +
Preference number: 2 (lower is better)
Translates to: GCPGSWGQFWGYSREEELPRMLD*MPQCFR
Trigger: TCTAAAGCATTGTGGCATCCAGTCTAGCATCCTTGG...CAGCTCTTCCTCCCTGCTGTAACCCCAGAACTGACCCCAAGAACCAGGACAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR TCA 90 bp AGCACGTGGGGGACAGCGCACAGCGTGCAAACCAGCATACAGCATAGGATACAATGCAGTGACATACAGTaGCAAACTGAGCAGATAAGA +
Preference number: 2 (lower is better)
Translates to: STWGTAHSVQTSIQHRIQCSDIQ*QTEQIR
Trigger: TCTTATCTGCTCAGTTTGTCACTGTATGTCACTGCA...TTGTATCCTATGCTGTATGCTGGTTTGCACGCTGTGCGCTGTCCCCCACGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR TCA 90 bp CCCACCACCCATCTGCCAACAGGAGTGCTGGTATCAGACTCACAGCCCCCAATCTCCCTCACCTTCTTTTaGTTTTGTTTGAAAGACCTA +
Preference number: 2 (lower is better)
Translates to: PTTHLPTGVLVSDSQPPISLTFF*FCLKDL
Trigger: TAGGTCTTTCAAACAAAATCAAAAGAAGGTGAGGGA...GATTGGGGGCTGTGAGTCTGATACCAGCACTCCTGTTGGCAGATGGGTGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR CCA 90 bp ACCCTATCCAATTCTTACAAGTATTCCGCATGTGGGAGCTGGCACTTGGATTCAAACACTGGGCTCTGCTaGAATGTCCCCTCCCTCTAC +
Preference number: 2 (lower is better)
Translates to: TLSNSYKYSACGSWHLDSNTGLC*NVPSLY
Trigger: GTAGAGGGAGGGGACATTCCAGCAGAGCCCAGTGTT...TGAATCCAAGTGCCAGCTCCCACATGCGGAATACTTGTAAGAATTGGATAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR GCA 90 bp ACCCTATCCAATTCTTACAAGTATTCCGCATGTGGGAGCTGGCACTTGGATTCATCACTTTGTAACCCTTaGCCAGAATGCTGGGGTCGC +
Preference number: 2 (lower is better)
Translates to: TLSNSYKYSACGSWHLDSSLCNP*PECWGR
Trigger: GCGACCCCAGCATTCTGGGCAAGGGTTACAAAGTGA...TGAATCCAAGTGCCAGCTCCCACATGCGGAATACTTGTAAGAATTGGATAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR CCA 90 bp CCCACCACCCATCTGCCAACAGGAGTGCTGGTATCAGACTCACAGCCCCCAATCGAGAAGTTTTCTTTCTaGTCCCTGGATAAATCATAT +
Preference number: 2 (lower is better)
Translates to: PTTHLPTGVLVSDSQPPIEKFSF*SLDKSY
Trigger: ATATGATTTATCCAGGGACCAGAAAGAAAACTTCTC...GATTGGGGGCTGTGAGTCTGATACCAGCACTCCTGTTGGCAGATGGGTGGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR GCA 90 bp GGTTGTCCTGGTTCTTGGGGTCAGTTCTGGGGTTACAGCAGGGAGGAAGAGCTGCGGGGTTTAGAAATATaGCTTAAAACTCATCTCATT +
Preference number: 2 (lower is better)
Translates to: GCPGSWGQFWGYSREEELRGLEI*LKTHLI
Trigger: AATGAGATGAGTTTTAAGGCATATTTCTAAACCCCG...CAGCTCTTCCTCCCTGCTGTAACCCCAGAACTGACCCCAAGAACCAGGACAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CAA 90 bp ACCCTATCCAATTCTTACAAGTATTCCGCATGTGGGAGCTGGCACTaGGATTCAGAGGTCAGTGCTTCTCTATGCTCCTCTATGCATGAT +
Preference number: 2 (lower is better)
Translates to: TLSNSYKYSACGSWH*DSEVSASLCSSMHD
Trigger: ATCATGCATAGAGGAGCATAGAGAAGCACTGACCTCTGAATCCAAGTGCCAGCTCCCACATGCGGAATACTTGTAAGAATTGGATAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CAA 90 bp TTCTACGAGCCACTCTGGCTGAGAAGTACTGACATCTTTGTAAACTaGACTCCACAAAGCCTTAGATCAAACACTCCTGTGGCAGAGACC +
Preference number: 2 (lower is better)
Translates to: FYEPLWLRSTDIFVN*TPQSLRSNTPVAET
Trigger: GGTCTCTGCCACAGGAGTGTTTGATCTAAGGCTTTGTGGAGTCAAGTTTACAAAGATGTCAGTACTTCTCAGCCAGAGTGGCTCGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR CCA 90 bp GAAGCTCTGTCTCCTGTCTCCTGTGGTTTCCAGCAGGTAAAAAGAATAAGGCAGTTTGACTCGTGTTCTTaGCCTAGAAAGGTGGTGATT +
Preference number: 2 (lower is better)
Translates to: EALSPVSCGFQQVKRIRQFDSCS*PRKVVI
Trigger: AATCACCACCTTTCTAGGCCAAGAACACGAGTCAAA...CTGCCTTATTCTTTTTACCTGCTGGAAACCACAGGAGACAGGAGACAGAGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR TCA 90 bp ACCCTATCCAATTCTTACAAGTATTCCGCATGTGGGAGCTGGCACTTGGATTCACTCTGTGTGTTTCTCTaGAGAGGCTTTTTCTTGACT +
Preference number: 2 (lower is better)
Translates to: TLSNSYKYSACGSWHLDSLCVFL*RGFFLT
Trigger: AGTCAAGAAAAAGCCTCTTCAGAGAAACACACAGAG...TGAATCCAAGTGCCAGCTCCCACATGCGGAATACTTGTAAGAATTGGATAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR TCA 90 bp GAAGCTCTGTCTCCTGTCTCCTGTGGTTTCCAGCAGGTAAAAAGAATAAGGCAGGCTTTCTGCATCTTCTaGTGCAGACTTAAGACAAAA +
Preference number: 2 (lower is better)
Translates to: EALSPVSCGFQQVKRIRQAFCIF*CRLKTK
Trigger: TTTTGTCTTAAGTCTGCATCAGAAGATGCAGAAAGC...CTGCCTTATTCTTTTTACCTGCTGGAAACCACAGGAGACAGGAGACAGAGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR GCA 90 bp GAAGCTCTGTCTCCTGTCTCCTGTGGTTTCCAGCAGGTAAAAAGAATAAGGCAGATATATTGTTTTCCATaGTACCTCTCACCTTGGAGG +
Preference number: 2 (lower is better)
Translates to: EALSPVSCGFQQVKRIRQIYCFP*YLSPWR
Trigger: CCTCCAAGGTGAGAGGTAGCATGGAAAACAATATAT...CTGCCTTATTCTTTTTACCTGCTGGAAACCACAGGAGACAGGAGACAGAGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR GCA 90 bp TTTTCCCTCTCAAATAACTTTCTTAAACTCCCATTCAAGGGAGAGGATGCTAAACCAGGGTCACAGGCTTaGACACTCAGGTCCCAAAAG +
Preference number: 2 (lower is better)
Translates to: FSLSNNFLKLPFKGEDAKPGSQA*TLRSQK
Trigger: CTTTTGGGACCTGAGTGTGCAAGCCTGTGACCCTGG...TTTAGCATCCTCTCCCTTGAATGGGAGTTTAAGAAAGTTATTTGAGAGGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR CCA 90 bp TTTTCCCTCTCAAATAACTTTCTTAAACTCCCATTCAAGGGAGAGGATGCTAAAATTAGCAATCCCTCCTaGCCACCTGGAGGCTTAGGG +
Preference number: 2 (lower is better)
Translates to: FSLSNNFLKLPFKGEDAKISNPS*PPGGLG
Trigger: CCCTAAGCCTCCAGGTGGCCAGGAGGGATTGCTAAT...TTTAGCATCCTCTCCCTTGAATGGGAGTTTAAGAAAGTTATTTGAGAGGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR CCA 90 bp TGGATATTGTATTTACAGCCAGATTTTATTCTCAAATCAGCAGGGCTAATCATGGCTGGGCTTATCCTCTaGTCTGTCAGCAGAAACCAC +
Preference number: 2 (lower is better)
Translates to: WILYLQPDFILKSAGLIMAGLIL*SVSRNH
Trigger: GTGGTTTCTGCTGACAGACCAGAGGATAAGCCCAGC...CATGATTAGCCCTGCTGATTTGAGAATAAAATCTGGCTGTAAATACAATATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR TCA 90 bp TTTTCCCTCTCAAATAACTTTCTTAAACTCCCATTCAAGGGAGAGGATGCTAAACAAAGAGTTCCTGAATaGCTCAGACTGGGGCAATCA +
Preference number: 2 (lower is better)
Translates to: FSLSNNFLKLPFKGEDAKQRVPE*LRLGQS
Trigger: TGATTGCCCCAGTCTGAGTCATTCAGGAACTCTTTG...TTTAGCATCCTCTCCCTTGAATGGGAGTTTAAGAAAGTTATTTGAGAGGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR GCA 90 bp TGGATATTGTATTTACAGCCAGATTTTATTCTCAAATCAGCAGGGCTAATCATGCACCCTACACACTGCTaGACTTCTCTTGTAAGCTCA +
Preference number: 2 (lower is better)
Translates to: WILYLQPDFILKSAGLIMHPTHC*TSLVSS
Trigger: TGAGCTTACAAGAGAAGTGCAGCAGTGTGTAGGGTG...CATGATTAGCCCTGCTGATTTGAGAATAAAATCTGGCTGTAAATACAATATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR GCA 90 bp TTTTCCCTCTCAAATAACTTTCTTAAACTCCCATTCAAGGGAGAGGATGCTAAACAGAGACAGCGGAGATaGTTAGGTCTTCTATTAACG +
Preference number: 2 (lower is better)
Translates to: FSLSNNFLKLPFKGEDAKQRQRR*LGLLLT
Trigger: CGTTAATAGAAGACCTAAGCATCTCCGCTGTCTCTG...TTTAGCATCCTCTCCCTTGAATGGGAGTTTAAGAAAGTTATTTGAGAGGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CAA 90 bp AACCCCAAACGATATAGTTTAGAGCTGATAGTCCCTCACCTTCTTTaGATTTTGTTTGAAAGACCTAGGGTATCTACATTTGCAAGTGTG +
Preference number: 2 (lower is better)
Translates to: NPKRYSLELIVPHLL*ILFERPRVSTFASV
Trigger: CACACTTGCAAATGTAGATACCCTAGGTCTTTCAAACAAAATCAAAAGAAGGTGAGGGACTATCAGCTCTAAACTATATCGTTTGGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR TCA 90 bp TTTTCCCTCTCAAATAACTTTCTTAAACTCCCATTCAAGGGAGAGGATGCTAAATTTCTTGCTGGAGAATaGAGATGTAGAGTCAGGTCT +
Preference number: 2 (lower is better)
Translates to: FSLSNNFLKLPFKGEDAKFLAGE*RCRVRS
Trigger: AGACCTGACTCTACATCTTCATTCTCCAGCAAGAAA...TTTAGCATCCTCTCCCTTGAATGGGAGTTTAAGAAAGTTATTTGAGAGGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR GCA 90 bp TGGATATTGTATTTACAGCCAGATTTTATTCTCAAATCAGCAGGGCTAATCATGGGATTCAGAGGTCAGTaGTTCTCTATGCTCCTCTAT +
Preference number: 2 (lower is better)
Translates to: WILYLQPDFILKSAGLIMGFRGQ*FSMLLY
Trigger: ATAGAGGAGCATAGAGAAGCACTGACCTCTGAATCC...CATGATTAGCCCTGCTGATTTGAGAATAAAATCTGGCTGTAAATACAATATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CAA 90 bp AAACGATATAGTTTAGAGCTGATAGTCCCTCACCTTCTTTTGATTTaGTTTGAAAGACCTAGGGTATCTACATTTGCAAGTGTGTATGTG +
Preference number: 2 (lower is better)
Translates to: KRYSLELIVPHLLLI*FERPRVSTFASVYV
Trigger: CACATACACACTTGCAAATGTAGATACCCTAGGTCTTTCAAACAAAATCAAAAGAAGGTGAGGGACTATCAGCTCTAAACTATATCGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 72 bp GAGATGGAGGGCCCTCAGGCTTCTGGCGGATTTTCCTaGCTCCGCCCACCACCCATCTGCCAACAGGAGTGC +
Preference number: 3 (lower is better)
Translates to: EMEGPQASGGFS*LRPPPICQQEC
Trigger: GCACTCCTGTTGGCAGATGGGTGGTGGGCGGAGGCAGGAAAATCCGCCAGAAGCCTGAGGGCCCTCCATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 72 bp TGGCGTGAAGTCCCCACTGGGGAACAGTTCAGGGCCTaGGGAGTGGCCAAGTGTTGGCACAGGCCTGGTGAG +
Preference number: 3 (lower is better)
Translates to: WREVPTGEQFRA*GVAKCWHRPGE
Trigger: CTCACCAGGCCTGTGCCAACACTTGGCCACTCCCCAGGCCCTGAACTGTTCCCCAGTGGGGACTTCACGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 72 bp AGAGACAGAGAGAGCGCGAGCGAGCGCGGGTGGCAGTaGGCGAGAGAACCGGGTGCAGTGACATACAGTGAC +
Preference number: 3 (lower is better)
Translates to: RDRESASERGWQ*AREPGAVTYSD
Trigger: GTCACTGTATGTCACTGCACCCGGTTCTCTCGCTCACTGCCACCCGCGCTCGCTCGCGCTCTCTCTGTCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 72 bp CGGCCTGACCGGAAGGGGGTGGTCCTCACAGTGCTCTaGGCTCTGCACAGGCCACATGGGATACTCAGGTCT +
Preference number: 3 (lower is better)
Translates to: RPDRKGVVLTVL*ALHRPHGILRS
Trigger: AGACCTGAGTATCCCATGTGGCCTGTGCAGAGCTCAGAGCACTGTGAGGACCACCCCCTTCCGGTCAGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 72 bp ACCCCTCAGGGAGTCAGCGGAGTGGGGGTGCAGGACTaGAGACTGAGTTCTGCAGACAGCACCAGGTACCCA +
Preference number: 3 (lower is better)
Translates to: TPQGVSGVGVQD*RLSSADSTRYP
Trigger: TGGGTACCTGGTGCTGTCTGCAGAACTCAGTCTCCAGTCCTGCACCCCCACTCCGCTGACTCCCTGAGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 72 bp TTCAGAGCCATGGTCCCAGAACCACAGCAGATGGGGTaGGGACGCCTGTGCCTGTGTATGTGCGGCTCTGGG +
Preference number: 3 (lower is better)
Translates to: FRAMVPEPQQMG*GRLCLCMCGSG
Trigger: CCCAGAGCCGCACATACACAGGCACAGGCGTCCTCACCCCATCTGCTGTGGTTCTGGGACCATGGCTCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 72 bp ACCCACCGCCTGCTGGCACAGGATACTGGTCATTTGTaGTGGAGCTTGGGTAGCCGGGAATCCAGGCTCAGC +
Preference number: 3 (lower is better)
Translates to: THRLLAQDTGHL*WSLGSRESRLS
Trigger: GCTGAGCCTGGATTCCCGGCTACCCAAGCTCCAGCACAAATGACCAGTATCCTGTGCCAGCAGGCGGTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 72 bp ACCGGAAGGGGGTGGTCCTCACAGTGCTCTGAGCTCTaGACAGGCCACATGGGATACTCAGGTCTGTGCCCT +
Preference number: 3 (lower is better)
Translates to: TGRGWSSQCSEL*TGHMGYSGLCP
Trigger: AGGGCACAGACCTGAGTATCCCATGTGGCCTGTGCAGAGCTCAGAGCACTGTGAGGACCACCCCCTTCCGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 72 bp TGGACGCTGCCCTCACTTTGTAACCCTTGCCCAGAATaGTGGGGTCGCTTCCACCGGAGAGACTCCACGGTA +
Preference number: 3 (lower is better)
Translates to: WTLPSLCNPCPE*WGRFHRRDSTV
Trigger: TACCGTGGAGTCTCTCCGGTGGAAGCGACCCCAGCATTCTGGGCAAGGGTTACAAAGTGAGGGCAGCGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 72 bp GTGCCTGTGTATGTGCGGCTCTGGGGATCTGGACGCTaGCCTCACTTTGTAACCCTTGCCCAGAATGCTGGG +
Preference number: 3 (lower is better)
Translates to: VPVYVRLWGSGR*PHFVTLAQNAG
Trigger: CCCAGCATTCTGGGCAAGGGTTACAAAGTGAGGGCAGCGTCCAGATCCCCAGAGCCGCACATACACAGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 72 bp GAGCTCTGCACAGGCCACATGGGATACTCAGGTCTGTaGCCTCAGGGTCACTGGAAGGTGGGCAAGGCTAAG +
Preference number: 3 (lower is better)
Translates to: ELCTGHMGYSGL*PQGHWKVGKAK
Trigger: CTTAGCCTTGCCCACCTTCCAGTGACCCTGAGGGCACAGACCTGAGTATCCCATGTGGCCTGTGCAGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 72 bp GACGCCTGTGCCTGTGTATGTGCGGCTCTGGGGATCTaGACGCTGCCCTCACTTTGTAACCCTTGCCCAGAA +
Preference number: 3 (lower is better)
Translates to: DACACVCAALGI*TLPSLCNPCPE
Trigger: TTCTGGGCAAGGGTTACAAAGTGAGGGCAGCGTCCAGATCCCCAGAGCCGCACATACACAGGCACAGGCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 72 bp CACCGCCTGCTGGCACAGGATACTGGTCATTTGTGCTaGAGCTTGGGTAGCCGGGAATCCAGGCTCAGCTTG +
Preference number: 3 (lower is better)
Translates to: HRLLAQDTGHLC*SLGSRESRLSL
Trigger: CAAGCTGAGCCTGGATTCCCGGCTACCCAAGCTCCAGCACAAATGACCAGTATCCTGTGCCAGCAGGCGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR CAA 90 bp CGCTTCCTGAGGCAAAGCATCTCCTCACGAGCCTTGCCTGCCCATGCCATACAGGTTATGTGCTCCAGGTaGGAGATGGAGGGCCCTCAG +
Preference number: 3 (lower is better)
Translates to: RFLRQSISSRALPAHAIQVMCSR*EMEGPQ
Trigger: CTGAGGGCCCTCCATCTCCAACCTGGAGCACATAAC...CTGTATGGCATGGGCAGGCAAGGCTCGTGAGGAGATGCTTTGCCTCAGGAAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR CAA 90 bp GTGCTGTGCTCAGTTCTGCCCACGACAGCTTGCTGTGAGCAGGGAAAGGAATCCCATTTGTGCTGGAGCTaGGGTAGCCGGGAATCCAGG +
Preference number: 3 (lower is better)
Translates to: VLCSVLPTTACCEQGKESHLCWS*GSRESR
Trigger: CCTGGATTCCCGGCTACCCAAGCTCCAGCACAAATG...GGATTCCTTTCCCTGCTCACAGCAAGCTGTCGTGGGCAGAACTGAGCACAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR CAA 90 bp CGCTTCCTGAGGCAAAGCATCTCCTCACGAGCCTTGCCTGCCCATGCCATACAGTGTGGGAGCTGGCACTaGGATTCAGAGGTCAGTGCT +
Preference number: 3 (lower is better)
Translates to: RFLRQSISSRALPAHAIQCGSWH*DSEVSA
Trigger: AGCACTGACCTCTGAATCCAAGTGCCAGCTCCCACA...CTGTATGGCATGGGCAGGCAAGGCTCGTGAGGAGATGCTTTGCCTCAGGAAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 72 bp AAGCGGCAGCAGCAAATGGGGGCAGGATATTCCAGATaGCGCAGGGGAGCGGAGCCTACAATGGACGTTGTC +
Preference number: 3 (lower is better)
Translates to: KRQQQMGAGYSR*RRGAEPTMDVV
Trigger: GACAACGTCCATTGTAGGCTCCGCTCCCCTGCGTCATCTGGAATATCCTGCCCCCATTTGCTGCTGCCGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 72 bp ACGCTGCCCTCACTTTGTAACCCTTGCCCAGAATGCTaGGGTCGCTTCCACCGGAGAGACTCCACGGTATGT +
Preference number: 3 (lower is better)
Translates to: TLPSLCNPCPEC*GRFHRRDSTVC
Trigger: ACATACCGTGGAGTCTCTCCGGTGGAAGCGACCCCAGCATTCTGGGCAAGGGTTACAAAGTGAGGGCAGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 72 bp GCTGGAGCTTGGGTAGCCGGGAATCCAGGCTCAGCTTaGGATTCATCACCCACCCTACACACTGCTGCACTT +
Preference number: 3 (lower is better)
Translates to: AGAWVAGNPGSA*DSSPTLHTAAL
Trigger: AAGTGCAGCAGTGTGTAGGGTGGGTGATGAATCCCAAGCTGAGCCTGGATTCCCGGCTACCCAAGCTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 72 bp TGCCTCCGCCCACCACCCATCTGCCAACAGGAGTGCTaGTATCAGACTCACAGCCCCCAATCAGCTTTCTCA +
Preference number: 3 (lower is better)
Translates to: CLRPPPICQQEC*YQTHSPQSAFS
Trigger: TGAGAAAGCTGATTGGGGGCTGTGAGTCTGATACCAGCACTCCTGTTGGCAGATGGGTGGTGGGCGGAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR CAA 90 bp CGCTTCCTGAGGCAAAGCATCTCCTCACGAGCCTTGCCTGCCCATGCCATACAGCAGGATACTGGTCATTaGTGCTGGAGCTTGGGTAGC +
Preference number: 3 (lower is better)
Translates to: RFLRQSISSRALPAHAIQQDTGH*CWSLGS
Trigger: GCTACCCAAGCTCCAGCACAAATGACCAGTATCCTG...CTGTATGGCATGGGCAGGCAAGGCTCGTGAGGAGATGCTTTGCCTCAGGAAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 72 bp AGTAACAATCGAGTGGGCAGCATCCTGAGGACAGACTaGAGGAGAGGGGGAGGGAGAGAGAGACAGAGAGAG +
Preference number: 3 (lower is better)
Translates to: SNNRVGSILRTD*RRGGGRERQRE
Trigger: CTCTCTCTGTCTCTCTCTCCCTCCCCCTCTCCTTCAGTCTGTCCTCAGGATGCTGCCCACTCGATTGTTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 72 bp GCCGCTGAAGTGGAGGGTAACTGGAGTCCAGGTGACTaGGACCAGTCAGGTGAGCAATGTAACAAGACGGTC +
Preference number: 3 (lower is better)
Translates to: AAEVEGNWSPGD*DQSGEQCNKTV
Trigger: GACCGTCTTGTTACATTGCTCACCTGACTGGTCTCAGTCACCTGGACTCCAGTTACCCTCCACTTCAGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 72 bp GCCCTCAGGGTCACTGGAAGGTGGGCAAGGCTAAGCTaGACACCAGGAAACAGTAACCGCAAAGAGTTCCTG +
Preference number: 3 (lower is better)
Translates to: ALRVTGRWARLS*TPGNSNRKEFL
Trigger: CAGGAACTCTTTGCGGTTACTGTTTCCTGGTGTTCAGCTTAGCCTTGCCCACCTTCCAGTGACCCTGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 72 bp TCCCCTGTGCTGTGCTCAGTTCTGCCCACGACAGCTTaGTGTGAGCAGGGAAAGGAATCCAAGGATGCTAGA +
Preference number: 3 (lower is better)
Translates to: SPVLCSVLPTTA*CEQGKESKDAR
Trigger: TCTAGCATCCTTGGATTCCTTTCCCTGCTCACAGCAAGCTGTCGTGGGCAGAACTGAGCACAGCACAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 72 bp TGCTGGCACAGGATACTGGTCATTTGTGCTGGAGCTTaGGTAGCCGGGAATCCAGGCTCAGCTTGGGATTCA +
Preference number: 3 (lower is better)
Translates to: CWHRILVICAGA*VAGNPGSAWDS
Trigger: TGAATCCCAAGCTGAGCCTGGATTCCCGGCTACCCAAGCTCCAGCACAAATGACCAGTATCCTGTGCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 72 bp GCTGTGAGCAGGGAAAGGAATCCAAGGATGCTAGACTaGATGCCACAATGCTTTAGACACAGGGCAGGGCGG +
Preference number: 3 (lower is better)
Translates to: AVSRERNPRMLD*MPQCFRHRAGR
Trigger: CCGCCCTGCCCTGTGTCTAAAGCATTGTGGCATCCAGTCTAGCATCCTTGGATTCCTTTCCCTGCTCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 72 bp CACATGGGATACTCAGGTCTGTGCCCTCAGGGTCACTaGAAGGTGGGCAAGGCTAAGCTGAACACCAGGAAA +
Preference number: 3 (lower is better)
Translates to: HMGYSGLCPQGH*KVGKAKLNTRK
Trigger: TTTCCTGGTGTTCAGCTTAGCCTTGCCCACCTTCCAGTGACCCTGAGGGCACAGACCTGAGTATCCCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 72 bp CCCTCCTGGCCACCTGGAGGCTTAGGGCACCATCTTTaGGGGTACCTTATTCTTCCTTTTGCTTGGCTTGCT +
Preference number: 3 (lower is better)
Translates to: PSWPPGGLGHHL*GYLILPFAWLA
Trigger: AGCAAGCCAAGCAAAAGGAAGAATAAGGTACCCTCAAAGATGGTGCCCTAAGCCTCCAGGTGGCCAGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 72 bp TTCTCCCTCCACACCTTGGTACGGCGGGGTCTGTTTTaGTTGTCAGTGTTATGTGCTCCAGGTTGGAGATGG +
Preference number: 3 (lower is better)
Translates to: FSLHTLVRRGLF*LSVLCAPGWRW
Trigger: CCATCTCCAACCTGGAGCACATAACACTGACAAGCAAAACAGACCCCGCCGTACCAAGGTGTGGAGGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 72 bp CTTCCTGAGGCAAAGCATCTCCTCACGAGCCTTGCCTaGCCATGCCATACAGTGGAAAGCGACACTAGGTTT +
Preference number: 3 (lower is better)
Translates to: LPEAKHLLTSLA*PCHTVESDTRF
Trigger: AAACCTAGTGTCGCTTTCCACTGTATGGCATGGGCAGGCAAGGCTCGTGAGGAGATGCTTTGCCTCAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 72 bp GGAGGAAGAGCTGGCTGGCCTAAAGATTTTGGGACGTaGCAACAGGATCTAGGTGTCAGTGTGTCAGGTAGG +
Preference number: 3 (lower is better)
Translates to: GGRAGWPKDFGT*QQDLGVSVSGR
Trigger: CCTACCTGACACACTGACACCTAGATCCTGTTGGCACGTCCCAAAATCTTTAGGCCAGCCAGCTCTTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 72 bp TGCCACAATGCTTTAGACACAGGGCAGGGCGGGTGCTaGAAGAACTGGAGAGATCAGTGGCTACATTTGCAG +
Preference number: 3 (lower is better)
Translates to: CHNALDTGQGGC*KNWRDQWLHLQ
Trigger: CTGCAAATGTAGCCACTGATCTCTCCAGTTCTTCCAGCACCCGCCCTGCCCTGTGTCTAAAGCATTGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 72 bp GAGCCATCTCAACAGTCCAAGGTCAGTCATGATCTATaGGGCCTTCCAAGTCTCAATGCCCACGGACAGGCA +
Preference number: 3 (lower is better)
Translates to: EPSQQSKVSHDL*GLPSLNAHGQA
Trigger: TGCCTGTCCGTGGGCATTGAGACTTGGAAGGCCTCATAGATCATGACTGACCTTGGACTGTTGAGATGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 72 bp GAAAGGAATCCAAGGATGCTAGACTGGATGCCACAATaGTTTAGACACAGGGCAGGGCGGGTGCTGGAAGAA +
Preference number: 3 (lower is better)
Translates to: ERNPRMLDWMPQ*FRHRAGRVLEE
Trigger: TTCTTCCAGCACCCGCCCTGCCCTGTGTCTAAAGCATTGTGGCATCCAGTCTAGCATCCTTGGATTCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 72 bp AGCAGACCCCTCATCCCTCCTTTTGACTCGTGTTCTTaGCCTAGAAAGGTGGTGATTTGCCTTACCAGCAGG +
Preference number: 3 (lower is better)
Translates to: SRPLIPPFDSCS*PRKVVICLTSR
Trigger: CCTGCTGGTAAGGCAAATCACCACCTTTCTAGGCCAAGAACACGAGTCAAAAGGAGGGATGAGGGGTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 72 bp GGTCTGTTTTGCTTGTCAGTGTTATGTGCTCCAGGTTaGAGATGGAGGGCCCTCAGGCTTCTGGCGGATTTT +
Preference number: 3 (lower is better)
Translates to: GLFCLSVLCAPG*RWRALRLLADF
Trigger: AAAATCCGCCAGAAGCCTGAGGGCCCTCCATCTCCAACCTGGAGCACATAACACTGACAAGCAAAACAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 72 bp TCAGTTCTGGGGTTACAGCAGGGAGGAAGAGCTGGCTaGCCTAAAGATTTTGGGACGTGCCAACAGGATCTA +
Preference number: 3 (lower is better)
Translates to: SVLGLQQGGRAG*PKDFGTCQQDL
Trigger: TAGATCCTGTTGGCACGTCCCAAAATCTTTAGGCCAGCCAGCTCTTCCTCCCTGCTGTAACCCCAGAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR CAA 90 bp TGCCAGGGTCACAGGCTTGCACACTCAGGTCCCAAAAGCCCCTCTCCCAATACTATGCTACCTCTCACCTaGGAGGATCATAGTTACTGT +
Preference number: 3 (lower is better)
Translates to: CQGHRLAHSGPKSPSPNTMLPLT*EDHSYC
Trigger: ACAGTAACTATGATCCTCCAAGGTGAGAGGTAGCAT...AGTATTGGGAGAGGGGCTTTTGGGACCTGAGTGTGCAAGCCTGTGACCCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR CAA 90 bp ACCCTATCCAATTCTTACAAGTATTCCGCATGTGGGAGCTGGCACTTGGATTCAGCCAGGGTCACAGGCTaGCACACTCAGGTCCCAAAA +
Preference number: 3 (lower is better)
Translates to: TLSNSYKYSACGSWHLDSARVTG*HTQVPK
Trigger: TTTTGGGACCTGAGTGTGCAAGCCTGTGACCCTGGC...TGAATCCAAGTGCCAGCTCCCACATGCGGAATACTTGTAAGAATTGGATAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 72 bp GGTTCAGGGCTCATTCCTTGTCTACCCTCTCACTTATaGCTCCATGAGCTGCCTGACTTTAGAGCCATCAGC +
Preference number: 3 (lower is better)
Translates to: GSGLIPCLPSHL*LHELPDFRAIS
Trigger: GCTGATGGCTCTAAAGTCAGGCAGCTCATGGAGTCATAAGTGAGAGGGTAGACAAGGAATGAGCCCTGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 72 bp TGGCCTGCGATTGTTTCTGGGCATGTCCAACAGGAATaGTTAGGTTTTACCAACCCACTTGTTACAGCCGGC +
Preference number: 3 (lower is better)
Translates to: WPAIVSGHVQQE*LGFTNPLVTAG
Trigger: GCCGGCTGTAACAAGTGGGTTGGTAAAACCTAAGCATTCCTGTTGGACATGCCCAGAAACAATCGCAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 72 bp ATCACAAACAGGTTGTCAGACTTGGCCTGCAAACAGTaGTTACCTGCCGAGCCATCTCAACAGTCCAAGGTC +
Preference number: 3 (lower is better)
Translates to: ITNRLSDLACKQ*LPAEPSQQSKV
Trigger: GACCTTGGACTGTTGAGATGGCTCGGCAGGTAAGCACTGTTTGCAGGCCAAGTCTGACAACCTGTTTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 72 bp ATGTCCCCTCCCTCTACCGTGGCCTGCGATTGTTTCTaGGCATGTCCAACAGGAATGCTTAGGTTTTACCAA +
Preference number: 3 (lower is better)
Translates to: MSPPSTVACDCF*ACPTGMLRFYQ
Trigger: TTGGTAAAACCTAAGCATTCCTGTTGGACATGCCCAGAAACAATCGCAGGCCACGGTAGAGGGAGGGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 72 bp TTTGACTCGTGTTCTTGGCCTAGAAAGGTGGTGATTTaGCTTACCAGCAGGGGTCACCAAGACAAAGCCAAC +
Preference number: 3 (lower is better)
Translates to: FDSCSWPRKVVI*LTSRGHQDKAN
Trigger: GTTGGCTTTGTCTTGGTGACCCCTGCTGGTAAGGCAAATCACCACCTTTCTAGGCCAAGAACACGAGTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 72 bp GCTGAACACCAGGAAACAGTAACCGCAAAGAGTTCCTaGGAGGAAGAACAGAGGTGGCCAGAGTGGATAAAA +
Preference number: 3 (lower is better)
Translates to: AEHQETVTAKSS*EEEQRWPEWIK
Trigger: TTTTATCCACTCTGGCCACCTCTGTTCTTCCTCCCAGGAACTCTTTGCGGTTACTGTTTCCTGGTGTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 72 bp CTCAGCTTGGGATTCATCACCCACCCTACACACTGCTaGACTTCTCTTGTAAGCTCAGTGAGTTTAGAAGGA +
Preference number: 3 (lower is better)
Translates to: LSLGFITHPTHC*TSLVSSVSLEG
Trigger: TCCTTCTAAACTCACTGAGCTTACAAGAGAAGTGCAGCAGTGTGTAGGGTGGGTGATGAATCCCAAGCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 72 bp AGGCTCAGCTTGGGATTCATCACCCACCCTACACACTaGTGCACTTCTCTTGTAAGCTCAGTGAGTTTAGAA +
Preference number: 3 (lower is better)
Translates to: RLSLGFITHPTH*CTSLVSSVSLE
Trigger: TTCTAAACTCACTGAGCTTACAAGAGAAGTGCAGCAGTGTGTAGGGTGGGTGATGAATCCCAAGCTGAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 72 bp ACCTCACTCTCCCTCTTTTATATCCATACTGTGAAGTaGAGGCACGTACATGCCACACCTTGTATGGAGGTC +
Preference number: 3 (lower is better)
Translates to: TSLSLFYIHTVK*RHVHATPCMEV
Trigger: GACCTCCATACAAGGTGTGGCATGTACGTGCCTGCACTTCACAGTATGGATATAAAAGAGGGAGAGTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 72 bp CACGGGAACAAGGAAGCCCACGAGTCTCCCAATGGATaGCTACCATTTCTAGGATGTGGAGAAGTTTTCTTT +
Preference number: 3 (lower is better)
Translates to: HGNKEAHESPNG*LPFLGCGEVFF
Trigger: AAAGAAAACTTCTCCACATCCTAGAAATGGTAGCCATCCATTGGGAGACTCGTGGGCTTCCTTGTTCCCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 72 bp ATGGGAAACCCCAGAAGCTCTGTCTCCTGTCTCCTGTaGTTTCCAGCAGGTAAAAAGAATAAGGCAGGGTTA +
Preference number: 3 (lower is better)
Translates to: MGNPRSSVSCLL*FPAGKKNKAGL
Trigger: TAACCCTGCCTTATTCTTTTTACCTGCTGGAAACCACAGGAGACAGGAGACAGAGCTTCTGGGGTTTCCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 72 bp ATTCTTACAAGTATTCCGCATGTGGGAGCTGGCACTTaGATTCAGAGGTCAGTGCTTCTCTATGCTCCTCTA +
Preference number: 3 (lower is better)
Translates to: ILTSIPHVGAGT*IQRSVLLYAPL
Trigger: TAGAGGAGCATAGAGAAGCACTGACCTCTGAATCCAAGTGCCAGCTCCCACATGCGGAATACTTGTAAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 72 bp CTATCCAATTCTTACAAGTATTCCGCATGTGGGAGCTaGCACTTGGATTCAGAGGTCAGTGCTTCTCTATGC +
Preference number: 3 (lower is better)
Translates to: LSNSYKYSACGS*HLDSEVSASLC
Trigger: GCATAGAGAAGCACTGACCTCTGAATCCAAGTGCCAGCTCCCACATGCGGAATACTTGTAAGAATTGGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 72 bp CAAAACCCTATCCAATTCTTACAAGTATTCCGCATGTaGGAGCTGGCACTTGGATTCAGAGGTCAGTGCTTC +
Preference number: 3 (lower is better)
Translates to: QNPIQFLQVFRM*ELALGFRGQCF
Trigger: GAAGCACTGACCTCTGAATCCAAGTGCCAGCTCCCACATGCGGAATACTTGTAAGAATTGGATAGGGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 72 bp TCTACACAGCTACAAATAGTCCAGACTGGACGTCAGTaGCCCACAGCTACAACAAACATTCCAAACGGTACA +
Preference number: 3 (lower is better)
Translates to: STQLQIVQTGRQ*PTATTNIPNGT
Trigger: TGTACCGTTTGGAATGTTTGTTGTAGCTGTGGGCCACTGACGTCCAGTCTGGACTATTTGTAGCTGTGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 72 bp TCTCTGTGTGTTTCTCTGAAGAGGCTTTTTCTTGACTaGGCCATAGGTACTAACCTTGTTCCCTCTGCTCTG +
Preference number: 3 (lower is better)
Translates to: SLCVSLKRLFLD*AIGTNLVPSAL
Trigger: CAGAGCAGAGGGAACAAGGTTAGTACCTATGGCTCAGTCAAGAAAAAGCCTCTTCAGAGAAACACACAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 72 bp ACTATACCTCACTCTCCCTCTTTTATATCCATACTGTaGAGTGCAGGCACGTACATGCCACACCTTGTATGG +
Preference number: 3 (lower is better)
Translates to: TIPHSPSFISIL*SAGTYMPHLVW
Trigger: CCATACAAGGTGTGGCATGTACGTGCCTGCACTTCACAGTATGGATATAAAAGAGGGAGAGTGAGGTATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 72 bp CATTTAGAGGTCCCTGGTCTCCAGGGCTATAAACAGTaGGTGGTTGAATGTTTTGTGGAGCTGAGAGGAAAA +
Preference number: 3 (lower is better)
Translates to: HLEVPGLQGYKQ*VVECFVELRGK
Trigger: TTTTCCTCTCAGCTCCACAAAACATTCAACCACTCACTGTTTATAGCCCTGGAGACCAGGGACCTCTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 72 bp TTCCTTGTCTACCCTCTCACTTATGACTCCATGAGCTaGCTGACTTTAGAGCCATCAGCCTTGGATTTTACA +
Preference number: 3 (lower is better)
Translates to: FLVYPLTYDSMS*LTLEPSALDFT
Trigger: TGTAAAATCCAAGGCTGATGGCTCTAAAGTCAGGCAGCTCATGGAGTCATAAGTGAGAGGGTAGACAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CCA 72 bp TCTGCCTGCTCATGGTTCTTGTTCTACGAGCCACTCTaGCTGAGAAGTACTGACATCTTTGTAAACTTGACT +
Preference number: 3 (lower is better)
Translates to: SACSWFLFYEPL*LRSTDIFVNLT
Trigger: AGTCAAGTTTACAAAGATGTCAGTACTTCTCAGCCAGAGTGGCTCGTAGAACAAGAACCATGAGCAGGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 72 bp GCAGTGAGCGAGAGAACCGGGTGCAGTGACATACAGTaGCAAACTGAGCAGATAAGAAAAGGAATTCTATTT +
Preference number: 3 (lower is better)
Translates to: AVSERTGCSDIQ*QTEQIRKGILF
Trigger: AAATAGAATTCCTTTTCTTATCTGCTCAGTTTGTCACTGTATGTCACTGCACCCGGTTCTCTCGCTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 72 bp CATTCAAACTTGAATGCATACCAAAGAGTTCCTGAATaGCTCAGACTGGGGCAATCAGAGTCTGCTACCTGT +
Preference number: 3 (lower is better)
Translates to: HSNLNAYQRVPE*LRLGQSESATC
Trigger: ACAGGTAGCAGACTCTGATTGCCCCAGTCTGAGTCATTCAGGAACTCTTTGGTATGCATTCAAGTTTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 72 bp TGGATTCAGAGGTCAGTGCTTCTCTATGCTCCTCTATaGATGATGGGCCTGCGTTACTTAAGAAAGGAATAT +
Preference number: 3 (lower is better)
Translates to: WIQRSVLLYAPL*MMGLRYLRKEY
Trigger: ATATTCCTTTCTTAAGTAACGCAGGCCCATCATGCATAGAGGAGCATAGAGAAGCACTGACCTCTGAATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 72 bp TTTATTGAAAACAATCCTCACCCCCACATCCTCAGATaGTGGAAGTACGAGGTGTACATACAGTCACTTAGC +
Preference number: 3 (lower is better)
Translates to: FIENNPHPHILR*WKYEVYIQSLS
Trigger: GCTAAGTGACTGTATGTACACCTCGTACTTCCAGCATCTGAGGATGTGGGGGTGAGGATTGTTTTCAATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 72 bp AACTCATTCAAACTTGAATGCATACCAAAGAGTTCCTaGATGACTCAGACTGGGGCAATCAGAGTCTGCTAC +
Preference number: 3 (lower is better)
Translates to: NSFKLECIPKSS*MTQTGAIRVCY
Trigger: GTAGCAGACTCTGATTGCCCCAGTCTGAGTCATTCAGGAACTCTTTGGTATGCATTCAAGTTTGAATGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 72 bp AATGAGAAATCCATCAGACTTTCTTCCTATATATTCTaGCAGAACCTGCACCTATGGCATGAAACAGCCCTC +
Preference number: 3 (lower is better)
Translates to: NEKSIRLSSYIF*QNLHLWHETAL
Trigger: GAGGGCTGTTTCATGCCATAGGTGCAGGTTCTGTCAGAATATATAGGAAGAAAGTCTGATGGATTTCTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR GCA 72 bp CACACACAAAGCTTCTACCATCGGGGTTTAGAAATATaGCTTAAAACTCATCTCATTTCTCCCATTCTCTGT +
Preference number: 3 (lower is better)
Translates to: HTQSFYHRGLEI*LKTHLISPILC
Trigger: ACAGAGAATGGGAGAAATGAGATGAGTTTTAAGGCATATTTCTAAACCCCGATGGTAGAAGCTTTGTGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR TCA 72 bp AAAGACCTAGGGTATCTACATTTGCAAGTGTGTATGTaGGCTAGTGTGCCTAACTTTATAATCCTAGCAGTA +
Preference number: 3 (lower is better)
Translates to: KDLGYLHLQVCM*ASVPNFIILAV
Trigger: TACTGCTAGGATTATAAAGTTAGGCACACTAGCTCACATACACACTTGCAAATGTAGATACCCTAGGTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR CAA 90 bp TTTTCCCTCTCAAATAACTTTCTTAAACTCCCATTCAAGGGAGAGGATGCTAAAGTCCCTCACCTTCTTTaGATTTTGTTTGAAAGACCT +
Preference number: 3 (lower is better)
Translates to: FSLSNNFLKLPFKGEDAKVPHLL*ILFERP
Trigger: AGGTCTTTCAAACAAAATCAAAAGAAGGTGAGGGAC...TTTAGCATCCTCTCCCTTGAATGGGAGTTTAAGAAAGTTATTTGAGAGGGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR-3UTR CAA 90 bp TGGATATTGTATTTACAGCCAGATTTTATTCTCAAATCAGCAGGGCTAATCATGGAAAAGGAATTCTATTaGGACCCCAGTGATTTCAAT +
Preference number: 3 (lower is better)
Translates to: WILYLQPDFILKSAGLIMEKEFY*DPSDFN
Trigger: ATTGAAATCACTGGGGTCCAAATAGAATTCCTTTTC...CATGATTAGCCCTGCTGATTTGAGAATAAAATCTGGCTGTAAATACAATATCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR TCA 90 bp CGCTTCCTGAGGCAAAGCATCTCCTCACGAGCCTTGCCTGCCCATGCCATACAGTCTGCTGCCCCCGACTaGTGGGGGCGGAGTGACAGG +
Preference number: 4 (lower is better)
Translates to: RFLRQSISSRALPAHAIQSAAPD*WGRSDR
Trigger: CCTGTCACTCCGCCCCCATCAGTCGGGGGCAGCAGA...CTGTATGGCATGGGCAGGCAAGGCTCGTGAGGAGATGCTTTGCCTCAGGAAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR CCA 90 bp CGCTTCCTGAGGCAAAGCATCTCCTCACGAGCCTTGCCTGCCCATGCCATACAGACCTCCAGCTGGTCATaGGCACAGGCCCCGTTCCCT +
Preference number: 4 (lower is better)
Translates to: RFLRQSISSRALPAHAIQTSSWS*AQAPFP
Trigger: AGGGAACGGGGCCTGTGCCCATGACCAGCTGGAGGT...CTGTATGGCATGGGCAGGCAAGGCTCGTGAGGAGATGCTTTGCCTCAGGAAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CAA 72 bp CACACCCACCGCCTGCTGGCACAGGATACTGGTCATTaGTGCTGGAGCTTGGGTAGCCGGGAATCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: HTHRLLAQDTGH*CWSLGSRESRL
Trigger: GAGCCTGGATTCCCGGCTACCCAAGCTCCAGCACAAATGACCAGTATCCTGTGCCAGCAGGCGGTGGGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR TCA 90 bp TGCCAGGGTCACAGGCTTGCACACTCAGGTCCCAAAAGCCCCTCTCCCAATACTCAGGCCCTGGAGACCTaGGCACAGCGACACAGGGTA +
Preference number: 4 (lower is better)
Translates to: CQGHRLAHSGPKSPSPNTQALET*AQRHRV
Trigger: TACCCTGTGTCGCTGTGCTCAGGTCTCCAGGGCCTG...AGTATTGGGAGAGGGGCTTTTGGGACCTGAGTGTGCAAGCCTGTGACCCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR TCA 90 bp AACATGCTCAGCATGTCAGCACGGGAACAAGGAAGCCCACGAGTCTCCCAATGGCTGATGGGGGCGGAGTaGCAGGGGCGAAGTAGGCGT +
Preference number: 4 (lower is better)
Translates to: NMLSMSAREQGSPRVSQWLMGAE*QGRSRR
Trigger: ACGCCTACTTCGCCCCTGTCACTCCGCCCCCATCAG...CCATTGGGAGACTCGTGGGCTTCCTTGTTCCCGTGCTGACATGCTGAGCATGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR GCA 90 bp TGCTGGGGTCGCTTCCACCGGAGAGACTCCACGGTATGTCTAGAAGTGTCATTATGCAGAAGCGCTGTCTaGTGCCCCCGACTGATGGGG +
Preference number: 4 (lower is better)
Translates to: CWGRFHRRDSTVCLEVSLCRSAV*CPRLMG
Trigger: CCCCATCAGTCGGGGGCAGCAGACAGCGCTTCTGCA...TAATGACACTTCTAGACATACCGTGGAGTCTCTCCGGTGGAAGCGACCCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR CCA 90 bp AACATGCTCAGCATGTCAGCACGGGAACAAGGAAGCCCACGAGTCTCCCAATGGGGACATTCCAGGCCCTaGAGACCTGAGCACAGCGAC +
Preference number: 4 (lower is better)
Translates to: NMLSMSAREQGSPRVSQWGHSRP*RPEHSD
Trigger: GTCGCTGTGCTCAGGTCTCCAGGGCCTGGAATGTCC...CCATTGGGAGACTCGTGGGCTTCCTTGTTCCCGTGCTGACATGCTGAGCATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR CCA 90 bp AGCACGTGGGGGACAGCGCACAGCGTGCAAACCAGCATACAGCATAGGATACAATCTATCACCTCCAGCTaGTCATGGGCACAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: STWGTAHSVQTSIQHRIQSITSS*SWAQAP
Trigger: CGGGGCCTGTGCCCATGACCAGCTGGAGGTGATAGA...TTGTATCCTATGCTGTATGCTGGTTTGCACGCTGTGCGCTGTCCCCCACGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CAA 72 bp TGCTGGAGCTTGGGTAGCCGGGAATCCAGGCTCAGCTaGGGATTCATCACCCACCCTACACACTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: CWSLGSRESRLS*GFITHPTHCCT
Trigger: AGTGCAGCAGTGTGTAGGGTGGGTGATGAATCCCAAGCTGAGCCTGGATTCCCGGCTACCCAAGCTCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR TCA 90 bp GGTTGTCCTGGTTCTTGGGGTCAGTTCTGGGGTTACAGCAGGGAGGAAGAGCTGCCAGGGATGCATCGGTaGTTAGTGGGCAGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GCPGSWGQFWGYSREEELPGMHR*LVGSCP
Trigger: TGGACAACTGCCCACTAATCACCGATGCATCCCTGG...CAGCTCTTCCTCCCTGCTGTAACCCCAGAACTGACCCCAAGAACCAGGACAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR CCA 90 bp GGTTGTCCTGGTTCTTGGGGTCAGTTCTGGGGTTACAGCAGGGAGGAAGAGCTGCAACTGCTCCAACAGTaGACAGCCCTCACTCAGAGC +
Preference number: 4 (lower is better)
Translates to: GCPGSWGQFWGYSREEELQLLQQ*TALTQS
Trigger: GCTCTGAGTGAGGGCTGTCCACTGTTGGAGCAGTTG...CAGCTCTTCCTCCCTGCTGTAACCCCAGAACTGACCCCAAGAACCAGGACAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CAA 72 bp CTGCTGGCACAGGATACTGGTCATTTGTGCTGGAGCTaGGGTAGCCGGGAATCCAGGCTCAGCTTGGGATTC +
Preference number: 4 (lower is better)
Translates to: LLAQDTGHLCWS*GSRESRLSLGF
Trigger: GAATCCCAAGCTGAGCCTGGATTCCCGGCTACCCAAGCTCCAGCACAAATGACCAGTATCCTGTGCCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR TCA 90 bp TGCCAGGGTCACAGGCTTGCACACTCAGGTCCCAAAAGCCCCTCTCCCAATACTTCAGGATGGCATCTGTaGTATTGGAGCACCCAGAGG +
Preference number: 4 (lower is better)
Translates to: CQGHRLAHSGPKSPSPNTSGWHL*YWSTQR
Trigger: CCTCTGGGTGCTCCAATATCACAGATGCCATCCTGA...AGTATTGGGAGAGGGGCTTTTGGGACCTGAGTGTGCAAGCCTGTGACCCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR GCA 90 bp CGCTTCCTGAGGCAAAGCATCTCCTCACGAGCCTTGCCTGCCCATGCCATACAGCAGGAAATGTTCAACTaGTCCAACAGTGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: RFLRQSISSRALPAHAIQQEMFN*SNSGQP
Trigger: GGGCTGTCCACTGTTGGAGCAGTTGAACATTTCCTG...CTGTATGGCATGGGCAGGCAAGGCTCGTGAGGAGATGCTTTGCCTCAGGAAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR CCA 90 bp GGTTGTCCTGGTTCTTGGGGTCAGTTCTGGGGTTACAGCAGGGAGGAAGAGCTGTCTCAAACCTGCTCTTaGTCACTCCGTTCACGTCCC +
Preference number: 4 (lower is better)
Translates to: GCPGSWGQFWGYSREEELSQTCS*SLRSRP
Trigger: GGGACGTGAACGGAGTGACCAAGAGCAGGTTTGAGA...CAGCTCTTCCTCCCTGCTGTAACCCCAGAACTGACCCCAAGAACCAGGACAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CAA 72 bp ATGCGCTTCCTGAGGCAAAGCATCTCCTCACGAGCCTaGCCTGCCCATGCCATACAGTGGAAAGCGACACTA +
Preference number: 4 (lower is better)
Translates to: MRFLRQSISSRA*PAHAIQWKATL
Trigger: TAGTGTCGCTTTCCACTGTATGGCATGGGCAGGCAAGGCTCGTGAGGAGATGCTTTGCCTCAGGAAGCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CAA 72 bp GGGGGAGGACTGTTGTCCACTGTCCACACTCCTGTCTaGGTACTAATGCTGTCCCCAGAAGTAAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: GGGLLSTVHTPV*VLMLSPEVRKP
Trigger: GGGCTTCCTTACTTCTGGGGACAGCATTAGTACCAAGACAGGAGTGTGGACAGTGGACAACAGTCCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR TCA 90 bp GGTCAGGTACAGGCAGCAGCCCTCCAGCCTCTGCATCTCCTGTGTCGAGATATATTAAGAATAAGGCCTTaGGACCCCCACAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: GQVQAAALQPLHLLCRDILRIRP*DPHSLS
Trigger: TGAGAGGCTGTGGGGGTCTCAAGGCCTTATTCTTAA...TATATCTCGACACAGGAGATGCAGAGGCTGGAGGGCTGCTGCCTGTACCTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR TCA 90 bp AACATGCTCAGCATGTCAGCACGGGAACAAGGAAGCCCACGAGTCTCCCAATGGATTCGCTCAAGGCTGTaGCAGCTCTTCAAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: NMLSMSAREQGSPRVSQWIRSRL*QLFKCS
Trigger: GGAGCACTTGAAGAGCTGTCACAGCCTTGAGCGAAT...CCATTGGGAGACTCGTGGGCTTCCTTGTTCCCGTGCTGACATGCTGAGCATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR CCA 90 bp CCCACCACCCATCTGCCAACAGGAGTGCTGGTATCAGACTCACAGCCCCCAATCCTTGAATGCCATCCTTaGTTACTTGGTCACACCAGG +
Preference number: 4 (lower is better)
Translates to: PTTHLPTGVLVSDSQPPILECHP*LLGHTR
Trigger: CCTGGTGTGACCAAGTAACCAAGGATGGCATTCAAG...GATTGGGGGCTGTGAGTCTGATACCAGCACTCCTGTTGGCAGATGGGTGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CAA 72 bp TCCCTCCTGGCCACCTGGAGGCTTAGGGCACCATCTTaGAGGGTACCTTATTCTTCCTTTTGCTTGGCTTGC +
Preference number: 4 (lower is better)
Translates to: SLLATWRLRAPS*RVPYSSFCLAC
Trigger: GCAAGCCAAGCAAAAGGAAGAATAAGGTACCCTCAAAGATGGTGCCCTAAGCCTCCAGGTGGCCAGGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CAA 72 bp AGCCGGCATTACCGCTCCTTCACCATCACAAACAGGTaGTCAGACTTGGCCTGCAAACAGTGCTTACCTGCC +
Preference number: 4 (lower is better)
Translates to: SRHYRSFTITNR*SDLACKQCLPA
Trigger: GGCAGGTAAGCACTGTTTGCAGGCCAAGTCTGACAACCTGTTTGTGATGGTGAAGGAGCGGTAATGCCGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CAA 72 bp CCATACTGTGAAGTGCAGGCACGTACATGCCACACCTaGTATGGAGGTCACAGGACAATTCTCCCTCCACAC +
Preference number: 4 (lower is better)
Translates to: PYCEVQARTCHT*YGGHRTILPPH
Trigger: GTGTGGAGGGAGAATTGTCCTGTGACCTCCATACAAGGTGTGGCATGTACGTGCCTGCACTTCACAGTATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CAA 72 bp TACCGCTCCTTCACCATCACAAACAGGTTGTCAGACTaGGCCTGCAAACAGTGCTTACCTGCCGAGCCATCT +
Preference number: 4 (lower is better)
Translates to: YRSFTITNRLSD*ACKQCLPAEPS
Trigger: AGATGGCTCGGCAGGTAAGCACTGTTTGCAGGCCAAGTCTGACAACCTGTTTGTGATGGTGAAGGAGCGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR TCA 90 bp CTAGCAGTAAGGAGGCCAAGACAAGATTCCAGGCCAGCCAGAGCTACAGAGTATCCAAGTCGAGGTGTCTaGGTTTGGAGCAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: LAVRRPRQDSRPARATEYPSRGV*VWSRTC
Trigger: GCAAGTTCTGCTCCAAACTCAGACACCTCGACTTGG...ATACTCTGTAGCTCTGGCTGGCCTGGAATCTTGTCTTGGCCTCCTTACTGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR TCA 90 bp GTGCTGTGCTCAGTTCTGCCCACGACAGCTTGCTGTGAGCAGGGAAAGGAATCCGTGCACCTATGTACTTaGGAGCTTCATCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: VLCSVLPTTACCEQGKESVHLCT*ELHLLA
Trigger: AGCTAGAAGATGAAGCTCTCAAGTACATAGGTGCAC...GGATTCCTTTCCCTGCTCACAGCAAGCTGTCGTGGGCAGAACTGAGCACAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR GCA 90 bp GGTTGTCCTGGTTCTTGGGGTCAGTTCTGGGGTTACAGCAGGGAGGAAGAGCTGTCACTAGTGCTTGAATaGCATCCTTGGTTACTTGGT +
Preference number: 4 (lower is better)
Translates to: GCPGSWGQFWGYSREEELSLVLE*HPWLLG
Trigger: ACCAAGTAACCAAGGATGGCATTCAAGCACTAGTGA...CAGCTCTTCCTCCCTGCTGTAACCCCAGAACTGACCCCAAGAACCAGGACAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR GCA 90 bp CGCTTCCTGAGGCAAAGCATCTCCTCACGAGCCTTGCCTGCCCATGCCATACAGCATCTTCTAGCTGAGTaGAGCCTTTTAAGAATAAGG +
Preference number: 4 (lower is better)
Translates to: RFLRQSISSRALPAHAIQHLLAE*SLLRIR
Trigger: CCTTATTCTTAAAAGGCTGCACTCAGCTAGAAGATG...CTGTATGGCATGGGCAGGCAAGGCTCGTGAGGAGATGCTTTGCCTCAGGAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CAA 72 bp TGTATGGAGGTCACAGGACAATTCTCCCTCCACACCTaGGTACGGCGGGGTCTGTTTTGCTTGTCAGTGTTA +
Preference number: 4 (lower is better)
Translates to: CMEVTGQFSLHT*VRRGLFCLSVL
Trigger: TAACACTGACAAGCAAAACAGACCCCGCCGTACCAAGGTGTGGAGGGAGAATTGTCCTGTGACCTCCATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR CCA 90 bp TGCTGGGGTCGCTTCCACCGGAGAGACTCCACGGTATGTCTAGAAGTGTCATTACCATCCTTGGTTACTTaGTCACACCAGGAAATGTTC +
Preference number: 4 (lower is better)
Translates to: CWGRFHRRDSTVCLEVSLPSLVT*SHQEMF
Trigger: GAACATTTCCTGGTGTGACCAAGTAACCAAGGATGG...TAATGACACTTCTAGACATACCGTGGAGTCTCTCCGGTGGAAGCGACCCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR CCA 90 bp GGTTGTCCTGGTTCTTGGGGTCAGTTCTGGGGTTACAGCAGGGAGGAAGAGCTGTTAATGTTGGGTAAATaGGTCCTGAGTCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: GCPGSWGQFWGYSREEELLMLGK*VLSLLM
Trigger: CATCAAGAGACTCAGGACCCATTTACCCAACATTAA...CAGCTCTTCCTCCCTGCTGTAACCCCAGAACTGACCCCAAGAACCAGGACAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR GCA 90 bp CTAGCAGTAAGGAGGCCAAGACAAGATTCCAGGCCAGCCAGAGCTACAGAGTATAGAACATCTCAAACCTaGTCTTGGTCACTCCGTTCA +
Preference number: 4 (lower is better)
Translates to: LAVRRPRQDSRPARATEYRTSQT*SWSLRS
Trigger: TGAACGGAGTGACCAAGAGCAGGTTTGAGATGTTCT...ATACTCTGTAGCTCTGGCTGGCCTGGAATCTTGTCTTGGCCTCCTTACTGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR GCA 90 bp GAAGCTCTGTCTCCTGTCTCCTGTGGTTTCCAGCAGGTAAAAAGAATAAGGCAGTCCGTTGCCAGTTACTaGCATCCAGAGCTAGGACAT +
Preference number: 4 (lower is better)
Translates to: EALSPVSCGFQQVKRIRQSVASY*HPELGH
Trigger: ATGTCCTAGCTCTGGATGGCAGTAACTGGCAACGGA...CTGCCTTATTCTTTTTACCTGCTGGAAACCACAGGAGACAGGAGACAGAGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR CCA 90 bp CTAGCAGTAAGGAGGCCAAGACAAGATTCCAGGCCAGCCAGAGCTACAGAGTATATCTTCTCAAGCTCATaGCAATTCCTGGCTAGGGTA +
Preference number: 4 (lower is better)
Translates to: LAVRRPRQDSRPARATEYIFSSS*QFLARV
Trigger: TACCCTAGCCAGGAATTGCCATGAGCTTGAGAAGAT...ATACTCTGTAGCTCTGGCTGGCCTGGAATCTTGTCTTGGCCTCCTTACTGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR TCA 90 bp CTAGCAGTAAGGAGGCCAAGACAAGATTCCAGGCCAGCCAGAGCTACAGAGTATAGACATGTTTGTTATTaGCGTACAGGAAGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: LAVRRPRQDSRPARATEYRHVCY*RTGSQV
Trigger: GACTTGGCTTCCTGTACGTCAATAACAAACATGTCT...ATACTCTGTAGCTCTGGCTGGCCTGGAATCTTGTCTTGGCCTCCTTACTGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR GCA 90 bp ACCCTATCCAATTCTTACAAGTATTCCGCATGTGGGAGCTGGCACTTGGATTCAAACAGGTCTATCCGTTaGCAGTTACTGCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: TLSNSYKYSACGSWHLDSNRSIR*QLLPSR
Trigger: TCTGGATGGCAGTAACTGGCAACGGATAGACCTGTT...TGAATCCAAGTGCCAGCTCCCACATGCGGAATACTTGTAAGAATTGGATAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR GCA 90 bp ACCCTATCCAATTCTTACAAGTATTCCGCATGTGGGAGCTGGCACTTGGATTCAGTGCTATCCGTGATCTaGACACATTCTTCTAGGTCC +
Preference number: 4 (lower is better)
Translates to: TLSNSYKYSACGSWHLDSVLSVI*THSSRS
Trigger: GGACCTAGAAGAATGTGTGCAGATCACGGATAGCAC...TGAATCCAAGTGCCAGCTCCCACATGCGGAATACTTGTAAGAATTGGATAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CAA 72 bp ATCTTTGAGGGTACCTTATTCTTCCTTTTGCTTGGCTaGCTTAAGCAGTGTCACAGTGTAGCTGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: IFEGTLFFLLLG*LKQCHSVAEAD
Trigger: ATCAGCCTCAGCTACACTGTGACACTGCTTAAGCAAGCCAAGCAAAAGGAAGAATAAGGTACCCTCAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CAA 72 bp CCACTCTGGCTGAGAAGTACTGACATCTTTGTAAACTaGACTCCACAAAGCCTTAGATCAAACACTCCTGTG +
Preference number: 4 (lower is better)
Translates to: PLWLRSTDIFVN*TPQSLRSNTPV
Trigger: CACAGGAGTGTTTGATCTAAGGCTTTGTGGAGTCAAGTTTACAAAGATGTCAGTACTTCTCAGCCAGAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CAA 72 bp CAGGAGGATGTTCTCCTCGAACCTTCCACGCATGGTTaGTGTAACAAAAGCTTTTCCCTCTCAAATAACTTT +
Preference number: 4 (lower is better)
Translates to: QEDVLLEPSTHG*CNKSFSLSNNF
Trigger: AAAGTTATTTGAGAGGGAAAAGCTTTTGTTACACAAACCATGCGTGGAAGGTTCGAGGAGAACATCCTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR TCA 90 bp TTTTCCCTCTCAAATAACTTTCTTAAACTCCCATTCAAGGGAGAGGATGCTAAAAGGGACTGCAACTTATaGCACCCTCTGCATATGGTA +
Preference number: 4 (lower is better)
Translates to: FSLSNNFLKLPFKGEDAKRDCNL*HPLHMV
Trigger: TACCATATGCAGAGGGTGTCATAAGTTGCAGTCCCT...TTTAGCATCCTCTCCCTTGAATGGGAGTTTAAGAAAGTTATTTGAGAGGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CAA 72 bp ACAGTCCGACTATTTCTTATCATAACTTTCCTGCTTTaGTTAGAATTTCTTTCCAGACTGGCAAAGATTCAG +
Preference number: 4 (lower is better)
Translates to: TVRLFLIITFLL*LEFLSRLAKIQ
Trigger: CTGAATCTTTGCCAGTCTGGAAAGAAATTCTAACAAAAGCAGGAAAGTTATGATAAGAAATAGTCGGACTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CAA 72 bp CGATATAGTTTAGAGCTGATAGTCCCTCACCTTCTTTaGATTTTGTTTGAAAGACCTAGGGTATCTACATTT +
Preference number: 4 (lower is better)
Translates to: RYSLELIVPHLL*ILFERPRVSTF
Trigger: AAATGTAGATACCCTAGGTCTTTCAAACAAAATCAAAAGAAGGTGAGGGACTATCAGCTCTAAACTATATCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
3UTR CAA 72 bp TTCTTGCTGGAGAATGAAGATGTAGAGTCAGGTCTTTaGGATATTGTATTTACAGCCAGATTTTATTCTCAA +
Preference number: 4 (lower is better)
Translates to: FLLENEDVESGL*DIVFTARFYSQ
Trigger: TTGAGAATAAAATCTGGCTGTAAATACAATATCCAAAAGACCTGACTCTACATCTTCATTCTCCAGCAAGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR CAA 90 bp CGCTTCCTGAGGCAAAGCATCTCCTCACGAGCCTTGCCTGCCCATGCCATACAGTGGGTCCTGAGTCTCTaGATGCCAGCCCGGGTGATC +
Preference number: 5 (lower is better)
Translates to: RFLRQSISSRALPAHAIQWVLSL*MPARVI
Trigger: GATCACCCGGGCTGGCATCAAGAGACTCAGGACCCA...CTGTATGGCATGGGCAGGCAAGGCTCGTGAGGAGATGCTTTGCCTCAGGAAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS TCA 90 bp CATGGGCACAGGCCCCGTTCCCTAGGTGACGGATTCCATCGTCTGTaGTCAGCTCACAGTGAGAAAGACTCAACACTTGAAGCCGAGGAC +
Preference number: 5 (lower is better)
Translates to: HGHRPRSLGDGFHRL*SAHSEKDSTLEAED
Trigger: GTCCTCGGCTTCAAGTGTTGAGTCTTTCTCACTGTGAGCTGATCACAGACGATGGAATCCGTCACCTAGGGAACGGGGCCTGTGCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS GCA 90 bp ACCCGGCCCTCAATGTCCCTCTGGAAATCAAACAGGTCTATCCGTTaGCAGTTACTGCCATCCAGAGCTAGGACATTCCAGGCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: TRPSMSLWKSNRSIR*QLLPSRARTFQALE
Trigger: CTCCAGGGCCTGGAATGTCCTAGCTCTGGATGGCAGTAACTGGCAACGGATAGACCTGTTTGATTTCCAGAGGGACATTGAGGGCCGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000103143.10
ENSMUST00000149327.3
ENSMUST00000150378.8
CDS TCA 90 bp GCTCAAGGCTGTGACAGCTCTTCAAGTGCTCCAGGGATGCATCGGTaGTTAGTGGGCAGTTGTCCAGCTCTATCACCTCCAGCTGGTCAT +
Preference number: 5 (lower is better)
Translates to: AQGCDSSSSAPGMHR*LVGSCPALSPPAGH
Trigger: ATGACCAGCTGGAGGTGATAGAGCTGGACAACTGCCCACTAATCACCGATGCATCCCTGGAGCACTTGAAGAGCTGTCACAGCCTTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR CAA 90 bp AACATGCTCAGCATGTCAGCACGGGAACAAGGAAGCCCACGAGTCTCCCAATGGATCTCAAACCTGCTCTaGGTCACTCCGTTCACGTCC +
Preference number: 5 (lower is better)
Translates to: NMLSMSAREQGSPRVSQWISNLL*VTPFTS
Trigger: GGACGTGAACGGAGTGACCAAGAGCAGGTTTGAGAT...CCATTGGGAGACTCGTGGGCTTCCTTGTTCCCGTGCTGACATGCTGAGCATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR CAA 90 bp GGTCAGGTACAGGCAGCAGCCCTCCAGCCTCTGCATCTCCTGTGTCGAGATATAAAACAGGTCTATCCGTaGCCAGTTACTGCCATCCAG +
Preference number: 5 (lower is better)
Translates to: GQVQAAALQPLHLLCRDIKQVYP*PVTAIQ
Trigger: CTGGATGGCAGTAACTGGCAACGGATAGACCTGTTT...TATATCTCGACACAGGAGATGCAGAGGCTGGAGGGCTGCTGCCTGTACCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR CAA 90 bp GGTTGTCCTGGTTCTTGGGGTCAGTTCTGGGGTTACAGCAGGGAGGAAGAGCTGTCGAGGTGTCTGAGTTaGGAGCAGAACTTGCTAAGG +
Preference number: 5 (lower is better)
Translates to: GCPGSWGQFWGYSREEELSRCLS*EQNLLR
Trigger: CCTTAGCAAGTTCTGCTCCAAACTCAGACACCTCGA...CAGCTCTTCCTCCCTGCTGTAACCCCAGAACTGACCCCAAGAACCAGGACAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR CAA 90 bp GACACACCCACCGCCTGCTGGCACAGGATACTGGTCATTTGTGCTGGAGCTTGGGCCATCCTTGGTTACTaGGTCACACCAGGAAATGTT +
Preference number: 5 (lower is better)
Translates to: DTPTACWHRILVICAGAWAILGY*VTPGNV
Trigger: AACATTTCCTGGTGTGACCAAGTAACCAAGGATGGC...CCAAGCTCCAGCACAAATGACCAGTATCCTGTGCCAGCAGGCGGTGGGTGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR CAA 90 bp TGCCAGGGTCACAGGCTTGCACACTCAGGTCCCAAAAGCCCCTCTCCCAATACTTTTAAGAATAAGGCCTaGAGACCCCCACAGCCTCTC +
Preference number: 5 (lower is better)
Translates to: CQGHRLAHSGPKSPSPNTFKNKA*RPPQPL
Trigger: GAGAGGCTGTGGGGGTCTCAAGGCCTTATTCTTAAA...AGTATTGGGAGAGGGGCTTTTGGGACCTGAGTGTGCAAGCCTGTGACCCTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR CAA 90 bp CAGAACCACAGCAGATGGGGTGAGGACGCCTGTGCCTGTGTATGTGCGGCTCTGAGAAAGACTCAACACTaGAAGCCGAGGACAGTGAAT +
Preference number: 5 (lower is better)
Translates to: QNHSRWGEDACACVCAALRKTQH*KPRTVN
Trigger: ATTCACTGTCCTCGGCTTCAAGTGTTGAGTCTTTCT...CAGAGCCGCACATACACAGGCACAGGCGTCCTCACCCCATCTGCTGTGGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR CAA 90 bp AACATGCTCAGCATGTCAGCACGGGAACAAGGAAGCCCACGAGTCTCCCAATGGGTGATTAGTGGGCAGTaGTCCAGCTCTATCACCTCC +
Preference number: 5 (lower is better)
Translates to: NMLSMSAREQGSPRVSQWVISGQ*SSSITS
Trigger: GGAGGTGATAGAGCTGGACAACTGCCCACTAATCAC...CCATTGGGAGACTCGTGGGCTTCCTTGTTCCCGTGCTGACATGCTGAGCATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR CAA 90 bp CCCACCACCCATCTGCCAACAGGAGTGCTGGTATCAGACTCACAGCCCCCAATCTGTGCACCTATGTACTaGAGAGCTTCATCTTCTAGC +
Preference number: 5 (lower is better)
Translates to: PTTHLPTGVLVSDSQPPICAPMY*RASSSS
Trigger: GCTAGAAGATGAAGCTCTCAAGTACATAGGTGCACA...GATTGGGGGCTGTGAGTCTGATACCAGCACTCCTGTTGGCAGATGGGTGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR CAA 90 bp TGCTGGGGTCGCTTCCACCGGAGAGACTCCACGGTATGTCTAGAAGTGTCATTAGCGTGGACTTTAATGTaGGGTAAATGGGTCCTGAGT +
Preference number: 5 (lower is better)
Translates to: CWGRFHRRDSTVCLEVSLAWTLM*GKWVLS
Trigger: ACTCAGGACCCATTTACCCAACATTAAAGTCCACGC...TAATGACACTTCTAGACATACCGTGGAGTCTCTCCGGTGGAAGCGACCCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR CAA 90 bp CTAGCAGTAAGGAGGCCAAGACAAGATTCCAGGCCAGCCAGAGCTACAGAGTATAGTTTGGAGCAGAACTaGCTAAGGCTAGTGCAGGTA +
Preference number: 5 (lower is better)
Translates to: LAVRRPRQDSRPARATEYSLEQN*LRLVQV
Trigger: TACCTGCACTAGCCTTAGCAAGTTCTGCTCCAAACT...ATACTCTGTAGCTCTGGCTGGCCTGGAATCTTGTCTTGGCCTCCTTACTGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR CAA 90 bp CGCTTCCTGAGGCAAAGCATCTCCTCACGAGCCTTGCCTGCCCATGCCATACAGCTTTTAGAGACATGTTaGTTATTGACGTACAGGAAG +
Preference number: 5 (lower is better)
Translates to: RFLRQSISSRALPAHAIQLLETC*LLTYRK
Trigger: CTTCCTGTACGTCAATAACAAACATGTCTCTAAAAG...CTGTATGGCATGGGCAGGCAAGGCTCGTGAGGAGATGCTTTGCCTCAGGAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR CAA 90 bp GAAGCTCTGTCTCCTGTCTCCTGTGGTTTCCAGCAGGTAAAAAGAATAAGGCAGATGGCATCTGTGATATaGGAGCACCCAGAGGCACAG +
Preference number: 5 (lower is better)
Translates to: EALSPVSCGFQQVKRIRQMASVI*EHPEAQ
Trigger: CTGTGCCTCTGGGTGCTCCAATATCACAGATGCCAT...CTGCCTTATTCTTTTTACCTGCTGGAAACCACAGGAGACAGGAGACAGAGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS TCA 90 bp TGGGAACATCTGGCCACTTCTAATATTCTAAGTCGAGGGCAGTTCTaGCCTAGAGCGTTCAGGATGGCATCTGTGATATTGGAGCACCCA +
Preference number: 5 (lower is better)
Translates to: WEHLATSNILSRGQF*PRAFRMASVILEHP
Trigger: TGGGTGCTCCAATATCACAGATGCCATCCTGAACGCTCTAGGTCAGAACTGCCCTCGACTTAGAATATTAGAAGTGGCCAGATGTTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS CCA 90 bp TCATGGCAATTCCTGGCTAGGGTAGTGAAGCCCACATCTGTTAACTaGGAACATCTGGCCACTTCTAATATTCTAAGTCGAGGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: SWQFLARVVKPTSVN*EHLATSNILSRGQF
Trigger: GAACTGCCCTCGACTTAGAATATTAGAAGTGGCCAGATGTTCCCAGTTAACAGATGTGGGCTTCACTACCCTAGCCAGGAATTGCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS TCA 90 bp TCTGTGATATTGGAGCACCCAGAGGCACAGAGGGACTGCAACTTATaGCACCCTCTGCATATGGTAATGAGACCTTCATCTGTGATTTGT +
Preference number: 5 (lower is better)
Translates to: SVILEHPEAQRDCNL*HPLHMVMRPSSVIC
Trigger: ACAAATCACAGATGAAGGTCTCATTACCATATGCAGAGGGTGTCATAAGTTGCAGTCCCTCTGTGCCTCTGGGTGCTCCAATATCACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103143.10
ENSMUST00000147971.2
CDS-3UTR CAA 90 bp ACCCTATCCAATTCTTACAAGTATTCCGCATGTGGGAGCTGGCACTTGGATTCAAGCCTCCACATCGTTTaGAAATATTTTCCACTACCC +
Preference number: 5 (lower is better)
Translates to: TLSNSYKYSACGSWHLDSSLHIV*KYFPLP
Trigger: GGGTAGTGGAAAATATTTCAAAACGATGTGGAGGCT...TGAATCCAAGTGCCAGCTCCCACATGCGGAATACTTGTAAGAATTGGATAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR CAA 90 bp TGGATATTGTATTTACAGCCAGATTTTATTCTCAAATCAGCAGGGCTAATCATGGAGACATGTTTGTTATaGACGTACAGGAAGCCAAGT +
Preference number: 5 (lower is better)
Translates to: WILYLQPDFILKSAGLIMETCLL*TYRKPS
Trigger: ACTTGGCTTCCTGTACGTCAATAACAAACATGTCTC...CATGATTAGCCCTGCTGATTTGAGAATAAAATCTGGCTGTAAATACAATATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS-3UTR CAA 90 bp TGGATATTGTATTTACAGCCAGATTTTATTCTCAAATCAGCAGGGCTAATCATGGTCTTTGTACATCCGTaGAGACTTAGTACTTCAATA +
Preference number: 5 (lower is better)
Translates to: WILYLQPDFILKSAGLIMVFVHP*RLSTSI
Trigger: TATTGAAGTACTAAGTCTCAACGGATGTACAAAGAC...CATGATTAGCCCTGCTGATTTGAGAATAAAATCTGGCTGTAAATACAATATCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS CAA 90 bp CAGCTCTTCAAGTGCTCCAGGGATGCATCGGTGATTAGTGGGCAGTaGTCCAGCTCTATCACCTCCAGCTGGTCATGGGCACAGGCCCCG +
Preference number: 6 (lower is better)
Translates to: QLFKCSRDASVISGQ*SSSITSSWSWAQAP
Trigger: CGGGGCCTGTGCCCATGACCAGCTGGAGGTGATAGAGCTGGACAACTGCCCACTAATCACCGATGCATCCCTGGAGCACTTGAAGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS TCA 72 bp GGCAGTTCTGACCTAGAGCGTTCAGGATGGCATCTGTaGTATTGGAGCACCCAGAGGCACAGAGGGACTGCA +
Preference number: 6 (lower is better)
Translates to: GSSDLERSGWHL*YWSTQRHRGTA
Trigger: TGCAGTCCCTCTGTGCCTCTGGGTGCTCCAATATCACAGATGCCATCCTGAACGCTCTAGGTCAGAACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103143.10
ENSMUST00000147971.2
CDS TCA 72 bp CCAGAGGGCAGCCTGCTCCTAAGTCGAGGGCAGTTCTaGCCTAGAGCGTTCAGGATGGCATCTGTGATATTG +
Preference number: 6 (lower is better)
Translates to: PEGSLLLSRGQF*PRAFRMASVIL
Trigger: CAATATCACAGATGCCATCCTGAACGCTCTAGGTCAGAACTGCCCTCGACTTAGGAGCAGGCTGCCCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147971.2
CDS CAA 72 bp AAGTGCTCCAGGGATGCATCGGTGATTAGTGGGCAGTaGTCCAGCTCTATCACCTCCAGCTGGTCATGGGCA +
Preference number: 6 (lower is better)
Translates to: KCSRDASVISGQ*SSSITSSWSWA
Trigger: TGCCCATGACCAGCTGGAGGTGATAGAGCTGGACAACTGCCCACTAATCACCGATGCATCCCTGGAGCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS TCA 72 bp TGTGACAGCTCTTCAAGTGCTCCAGGGATGCATCGGTaGTTAGTGGGCAGTTGTCCAGCTCTATCACCTCCA +
Preference number: 6 (lower is better)
Translates to: CDSSSSAPGMHR*LVGSCPALSPP
Trigger: TGGAGGTGATAGAGCTGGACAACTGCCCACTAATCACCGATGCATCCCTGGAGCACTTGAAGAGCTGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS TCA 72 bp AGGCCCCGTTCCCTAGGTGACGGATTCCATCGTCTGTaGTCAGCTCACAGTGAGAAAGACTCAACACTTGAA +
Preference number: 6 (lower is better)
Translates to: RPRSLGDGFHRL*SAHSEKDSTLE
Trigger: TTCAAGTGTTGAGTCTTTCTCACTGTGAGCTGATCACAGACGATGGAATCCGTCACCTAGGGAACGGGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS GCA 72 bp TCTGGAAATCAAACAGGTCTATCCGTTGCCAGTTACTaGCATCCAGAGCTAGGACATTCCAGGCCCTGGAGA +
Preference number: 6 (lower is better)
Translates to: SGNQTGLSVASY*HPELGHSRPWR
Trigger: TCTCCAGGGCCTGGAATGTCCTAGCTCTGGATGGCAGTAACTGGCAACGGATAGACCTGTTTGATTTCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000103143.10
ENSMUST00000149327.3
ENSMUST00000150378.8
CDS CAA 90 bp GACGTACAGGAAGCCAAGTCGAGGTGTCTGAGTTTGGAGCAGAACTaGCTAAGGCTAGTGCAGGTAGCATCTGTTGTCTTTGTACATCCG +
Preference number: 6 (lower is better)
Translates to: DVQEAKSRCLSLEQN*LRLVQVASVVFVHP
Trigger: CGGATGTACAAAGACAACAGATGCTACCTGCACTAGCCTTAGCAAGTTCTGCTCCAAACTCAGACACCTCGACTTGGCTTCCTGTACGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS TCA 72 bp CTTCTAGCTGAGTGCAGCCTTTTAAGAATAAGGCCTTaGGACCCCCACAGCCTCTCACTAGTGCTTGAATGC +
Preference number: 6 (lower is better)
Translates to: LLAECSLLRIRP*DPHSLSLVLEC
Trigger: GCATTCAAGCACTAGTGAGAGGCTGTGGGGGTCTCAAGGCCTTATTCTTAAAAGGCTGCACTCAGCTAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000103143.10
ENSMUST00000147971.2
ENSMUST00000150378.8
CDS TCA 72 bp TTGGAGCACCCAGAGGCACAGAGGGACTGCAACTTATaGCACCCTCTGCATATGGTAATGAGACCTTCATCT +
Preference number: 6 (lower is better)
Translates to: LEHPEAQRDCNL*HPLHMVMRPSS
Trigger: AGATGAAGGTCTCATTACCATATGCAGAGGGTGTCATAAGTTGCAGTCCCTCTGTGCCTCTGGGTGCTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103143.10
ENSMUST00000147971.2
CDS CAA 90 bp TGGGAGTTAATGCCAAATTGCATTAAACACCTTCTTGATGGCATATaGCTTACCCCAGAGGGCAGCCTGCTCCTAAGTCGAGGGCAGTTC +
Preference number: 6 (lower is better)
Translates to: WELMPNCIKHLLDGI*LTPEGSLLLSRGQF
Trigger: GAACTGCCCTCGACTTAGGAGCAGGCTGCCCTCTGGGGTAAGCAATATGCCATCAAGAAGGTGTTTAATGCAATTTGGCATTAACTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147971.2
CDS CAA 90 bp GACGTACAGGAAGCCAAGTCGAGGTGTCTGAGTTTGGAGCAGAACTaGCTAAGGCTAGTGCAGGTACTTAATGCATTGTCTCCTACTCCA +
Preference number: 6 (lower is better)
Translates to: DVQEAKSRCLSLEQN*LRLVQVLNALSPTP
Trigger: TGGAGTAGGAGACAATGCATTAAGTACCTGCACTAGCCTTAGCAAGTTCTGCTCCAAACTCAGACACCTCGACTTGGCTTCCTGTACGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150378.8
CDS GCA 72 bp TCAATGTCCCTCTGGAAATCAAACAGGTCTATCCGTTaGCAGTTACTGCCATCCAGAGCTAGGACATTCCAG +
Preference number: 6 (lower is better)
Translates to: SMSLWKSNRSIR*QLLPSRARTFQ
Trigger: CTGGAATGTCCTAGCTCTGGATGGCAGTAACTGGCAACGGATAGACCTGTTTGATTTCCAGAGGGACATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000103143.10
ENSMUST00000149327.3
ENSMUST00000150378.8
CDS CAA 72 bp GAAGCCAAGTCGAGGTGTCTGAGTTTGGAGCAGAACTaGCTAAGGCTAGTGCAGGTAGCATCTGTTGTCTTT +
Preference number: 6 (lower is better)
Translates to: EAKSRCLSLEQN*LRLVQVASVVF
Trigger: AAAGACAACAGATGCTACCTGCACTAGCCTTAGCAAGTTCTGCTCCAAACTCAGACACCTCGACTTGGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS CAA 72 bp GTGGACAGCCCTCACTCAGAGCTTTTAGAGACATGTTaGTTATTGACGTACAGGAAGCCAAGTCGAGGTGTC +
Preference number: 6 (lower is better)
Translates to: VDSPHSELLETC*LLTYRKPSRGV
Trigger: GACACCTCGACTTGGCTTCCTGTACGTCAATAACAAACATGTCTCTAAAAGCTCTGAGTGAGGGCTGTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103143.10
ENSMUST00000150378.8
CDS TCA 72 bp CTGGCCACTTCTAATATTCTAAGTCGAGGGCAGTTCTaGCCTAGAGCGTTCAGGATGGCATCTGTGATATTG +
Preference number: 6 (lower is better)
Translates to: LATSNILSRGQF*PRAFRMASVIL
Trigger: CAATATCACAGATGCCATCCTGAACGCTCTAGGTCAGAACTGCCCTCGACTTAGAATATTAGAAGTGGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103143.10
CDS CCA 72 bp GAAATATTTTCCACTACCCGGCCCTCAATGTCCCTCTaGAAATCAAACAGGTCTATCCGTTGCCAGTTACTG +
Preference number: 6 (lower is better)
Translates to: EIFSTTRPSMSL*KSNRSIRCQLL
Trigger: CAGTAACTGGCAACGGATAGACCTGTTTGATTTCCAGAGGGACATTGAGGGCCGGGTAGTGGAAAATATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000103143.10
ENSMUST00000149327.3
ENSMUST00000150378.8
CDS CAA 72 bp ATGCCAAATTGCATTAAACACCTTCTTGATGGCATATaGCTTACCCCAGAGGGCAGCCTGCTCCTAAGTCGA +
Preference number: 6 (lower is better)
Translates to: MPNCIKHLLDGI*LTPEGSLLLSR
Trigger: TCGACTTAGGAGCAGGCTGCCCTCTGGGGTAAGCAATATGCCATCAAGAAGGTGTTTAATGCAATTTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147971.2
CDS CAA 72 bp GAAGCCAAGTCGAGGTGTCTGAGTTTGGAGCAGAACTaGCTAAGGCTAGTGCAGGTACTTAATGCATTGTCT +
Preference number: 6 (lower is better)
Translates to: EAKSRCLSLEQN*LRLVQVLNALS
Trigger: AGACAATGCATTAAGTACCTGCACTAGCCTTAGCAAGTTCTGCTCCAAACTCAGACACCTCGACTTGGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150378.8