Pregenerated sensors for FBXL15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025226Ensembl transcript IDs: ENSMUST00000026256.9, ENSMUST00000177667.2
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TGGCTCAGGGTCAAGCCCGGGCTACACAGTCCAGCTGTGCTCCCACCCCAAGGACCCGGAAGGCGCGACTaGCGCGCTGCAGCCGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: WLRVKPGLHSPAVLPPQGPGRRD*RAAAGA Trigger: TGCTCCGGCTGCAGCGCGTCAGTCGCGCCTTCCGGG...TCCTTGGGGTGGGAGCACAGCTGGACTGTGTAGCCCGGGCTTGACCCTGAGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR GCA 90 bp | TTCCCTATGGCTCAGGGTCAAGCCCGGGCTACACAGTCCAGCTGTGCTCCCACCGCGCGACTGACGCGCTaGAGCCGGAGCAGCTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: FPMAQGQARATQSSCAPTARLTR*SRSSWR Trigger: GCGCCAGCTGCTCCGGCTGCAGCGCGTCAGTCGCGC...GGTGGGAGCACAGCTGGACTGTGTAGCCCGGGCTTGACCCTGAGCCATAGGGAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR TCA 90 bp | AGTTTCCCTATGGCTCAGGGTCAAGCCCGGGCTACACAGTCCAGCTGTGCTCCCCCCGGAAGGCGCGACTaGCGCGCTGCAGCCGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: SFPMAQGQARATQSSCAPPGRRD*RAAAGA Trigger: TGCTCCGGCTGCAGCGCGTCAGTCGCGCCTTCCGGG...GGGAGCACAGCTGGACTGTGTAGCCCGGGCTTGACCCTGAGCCATAGGGAAACT 67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR GCA 90 bp | ATGGCTCAGGGTCAAGCCCGGGCTACACAGTCCAGCTGTGCTCCCACCCCAAGGGCGAGGGAAAGGCGCTaGAGACGCGGGCAGCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: MAQGQARATQSSCAPTPRARERR*RRGQPS Trigger: TGAGGGCTGCCCGCGTCTGCAGCGCCTTTCCCTCGC...CCTTGGGGTGGGAGCACAGCTGGACTGTGTAGCCCGGGCTTGACCCTGAGCCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR GCA 90 bp | TGGCTCAGGGTCAAGCCCGGGCTACACAGTCCAGCTGTGCTCCCACCCCAAGGAGCCACATGGTGGCAGTaGCGCACCCGCAGAGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: WLRVKPGLHSPAVLPPQGATWWQ*RTRRER Trigger: GCGCTCTCTGCGGGTGCGGCACTGCCACCATGTGGC...TCCTTGGGGTGGGAGCACAGCTGGACTGTGTAGCCCGGGCTTGACCCTGAGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR CCA 90 bp | CCAGGGTGGGACAGGGGATTTCACAGGCCTGTCAACCACAGGCCCCCACAGTTCGCTCGGCGACTCAGTTaGCCGCAGCCGGCCAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: PGWDRGFHRPVNHRPPQFARRLS*PQPASA Trigger: AGCGCTGGCCGGCTGCGGCCAACTGAGTCGCCGAGC...GAACTGTGGGGGCCTGTGGTTGACAGGCCTGTGAAATCCCCTGTCCCACCCTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR GCA 90 bp | CCAGGGTGGGACAGGGGATTTCACAGGCCTGTCAACCACAGGCCCCCACAGTTCGCGAGGGAAAGGCGCTaGAGACGCGGGCAGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGWDRGFHRPVNHRPPQFARERR*RRGQPS Trigger: TGAGGGCTGCCCGCGTCTGCAGCGCCTTTCCCTCGC...GAACTGTGGGGGCCTGTGGTTGACAGGCCTGTGAAATCCCCTGTCCCACCCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR GCA 90 bp | CCAGGGTGGGACAGGGGATTTCACAGGCCTGTCAACCACAGGCCCCCACAGTTCGCCACATGGTGGCAGTaGCGCACCCGCAGAGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PGWDRGFHRPVNHRPPQFATWWQ*RTRRER Trigger: GCGCTCTCTGCGGGTGCGGCACTGCCACCATGTGGC...GAACTGTGGGGGCCTGTGGTTGACAGGCCTGTGAAATCCCCTGTCCCACCCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR GCA 90 bp | TCCAGGGTGGGACAGGGGATTTCACAGGCCTGTCAACCACAGGCCCCCACAGTTAGCGAGGCCACGCAGTaGCAGCCCGTCCACCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: SRVGQGISQACQPQAPTVSEATQ*QPVHPV Trigger: GACTGGGTGGACGGGCTGGCACTGCGTGGCCTCGCT...AACTGTGGGGGCCTGTGGTTGACAGGCCTGTGAAATCCCCTGTCCCACCCTGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR CCA 90 bp | GTTCAGTTTCCCTATGGCTCAGGGTCAAGCCCGGGCTACACAGTCCAGCTGTGCGCTCGGCGACTCAGTTaGCCGCAGCCGGCCAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VQFPYGSGSSPGYTVQLCARRLS*PQPASA Trigger: AGCGCTGGCCGGCTGCGGCCAACTGAGTCGCCGAGC...GCACAGCTGGACTGTGTAGCCCGGGCTTGACCCTGAGCCATAGGGAAACTGAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR TCA 90 bp | CCAGGGTGGGACAGGGGATTTCACAGGCCTGTCAACCACAGGCCCCCACAGTTCTCCACCCAGTCACAGTaGGCGAGGGAAAGGCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PGWDRGFHRPVNHRPPQFSTQSQ*ARERRC Trigger: GCAGCGCCTTTCCCTCGCTCACTGTGACTGGGTGGA...GAACTGTGGGGGCCTGTGGTTGACAGGCCTGTGAAATCCCCTGTCCCACCCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR GCA 90 bp | GGGACAGGGGATTTCACAGGCCTGTCAACCACAGGCCCCCACAGTTCAGTTTCCAGCGAGGCCACGCAGTaGCAGCCCGTCCACCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: GTGDFTGLSTTGPHSSVSSEATQ*QPVHPV Trigger: GACTGGGTGGACGGGCTGGCACTGCGTGGCCTCGCT...GGAAACTGAACTGTGGGGGCCTGTGGTTGACAGGCCTGTGAAATCCCCTGTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR GCA 90 bp | CAGTTCAGTTTCCCTATGGCTCAGGGTCAAGCCCGGGCTACACAGTCCAGCTGTCCCGCGCCGCGTCTCTaGGCCAGGTACACGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: QFSFPMAQGQARATQSSCPAPRL*ARYTMA Trigger: GGCCATCGTGTACCTGGCGCAGAGACGCGGCGCGGG...ACAGCTGGACTGTGTAGCCCGGGCTTGACCCTGAGCCATAGGGAAACTGAACTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR CCA 90 bp | TTCCCTATGGCTCAGGGTCAAGCCCGGGCTACACAGTCCAGCTGTGCTCCCACCGGTTCAGCCACATGGTaGCAGTGCCGCACCCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FPMAQGQARATQSSCAPTGSATW*QCRTRR Trigger: TCTGCGGGTGCGGCACTGCCACCATGTGGCTGAACC...GGTGGGAGCACAGCTGGACTGTGTAGCCCGGGCTTGACCCTGAGCCATAGGGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR TCA 90 bp | TCCAGGGTGGGACAGGGGATTTCACAGGCCTGTCAACCACAGGCCCCCACAGTTTCCACCCAGTCACAGTaGGCGAGGGAAAGGCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRVGQGISQACQPQAPTVSTQSQ*ARERRC Trigger: GCAGCGCCTTTCCCTCGCTCACTGTGACTGGGTGGA...AACTGTGGGGGCCTGTGGTTGACAGGCCTGTGAAATCCCCTGTCCCACCCTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR GCA 90 bp | AGTTTCCCTATGGCTCAGGGTCAAGCCCGGGCTACACAGTCCAGCTGTGCTCCCAGCACCAGAGCCTGGTaGAGGGGTGGTTCCACGTCG | + |
|
Preference number: 4 (lower is better) Translates to: SFPMAQGQARATQSSCAPSTRAW*RGGSTS Trigger: CGACGTGGAACCACCCCTGCACCAGGCTCTGGTGCT...GGGAGCACAGCTGGACTGTGTAGCCCGGGCTTGACCCTGAGCCATAGGGAAACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR CCA 90 bp | TTCCCTATGGCTCAGGGTCAAGCCCGGGCTACACAGTCCAGCTGTGCTCCCACCGAGCCTGACAGCTCCTaGTTCTTGCTCCCCTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: FPMAQGQARATQSSCAPTEPDSS*FLLPSG Trigger: TCCGGAGGGGAGCAAGAACCAGGAGCTGTCAGGCTC...GGTGGGAGCACAGCTGGACTGTGTAGCCCGGGCTTGACCCTGAGCCATAGGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR CCA 90 bp | GGGATTTCACAGGCCTGTCAACCACAGGCCCCCACAGTTCAGTTTCCCTATGGCTGCAGCCGGAGCAGCTaGCGCAGCGGGACCCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: GISQACQPQAPTVQFPYGCSRSS*RSGTQF Trigger: GAACTGGGTCCCGCTGCGCCAGCTGCTCCGGCTGCA...GCCATAGGGAAACTGAACTGTGGGGGCCTGTGGTTGACAGGCCTGTGAAATCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR CCA 90 bp | CAGGGTGGGACAGGGGATTTCACAGGCCTGTCAACCACAGGCCCCCACAGTTCAGGTTCAGCCACATGGTaGCAGTGCCGCACCCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: QGGTGDFTGLSTTGPHSSGSATW*QCRTRR Trigger: TCTGCGGGTGCGGCACTGCCACCATGTGGCTGAACC...TGAACTGTGGGGGCCTGTGGTTGACAGGCCTGTGAAATCCCCTGTCCCACCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR CCA 90 bp | CCTGTCAACCACAGGCCCCCACAGTTCAGTTTCCCTATGGCTCAGGGTCAAGCCCTCGGTTCAGCCACATaGTGGCAGTGCCGCACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PVNHRPPQFSFPMAQGQALGSAT*WQCRTR Trigger: GCGGGTGCGGCACTGCCACCATGTGGCTGAACCGAG...GGCTTGACCCTGAGCCATAGGGAAACTGAACTGTGGGGGCCTGTGGTTGACAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR CCA 90 bp | CTGTCAACCACAGGCCCCCACAGTTCAGTTTCCCTATGGCTCAGGGTCAAGCCCCTCGGTTCAGCCACATaGTGGCAGTGCCGCACCCGC | + |
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Preference number: 4 (lower is better) Translates to: LSTTGPHSSVSLWLRVKPLGSAT*WQCRTR Trigger: GCGGGTGCGGCACTGCCACCATGTGGCTGAACCGAG...GGGCTTGACCCTGAGCCATAGGGAAACTGAACTGTGGGGGCCTGTGGTTGACAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR GCA 90 bp | CAGGGTGGGACAGGGGATTTCACAGGCCTGTCAACCACAGGCCCCCACAGTTCACCGGTGAGGTCTAGGTaGTCGAGCTGCGGGCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: QGGTGDFTGLSTTGPHSSPVRSR*SSCGQF Trigger: AAACTGCCCGCAGCTCGAGCACCTAGACCTCACCGG...TGAACTGTGGGGGCCTGTGGTTGACAGGCCTGTGAAATCCCCTGTCCCACCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR TCA 90 bp | GTTCAGTTTCCCTATGGCTCAGGGTCAAGCCCGGGCTACACAGTCCAGCTGTGCGTTGACGACAGGCGGTaGGGTCTAGCTCCTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: VQFPYGSGSSPGYTVQLCVDDRR*GLAPPE Trigger: CTCTGGAGGAGCTAGACCTCACCGCCTGTCGTCAAC...GCACAGCTGGACTGTGTAGCCCGGGCTTGACCCTGAGCCATAGGGAAACTGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR GCA 90 bp | GACAGGGGATTTCACAGGCCTGTCAACCACAGGCCCCCACAGTTCAGTTTCCCTGAGCTGTGGATTCCGTaGCAGCACCGGCACCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: DRGFHRPVNHRPPQFSFPELWIP*QHRHQV Trigger: GACCTGGTGCCGGTGCTGGCACGGAATCCACAGCTC...AGGGAAACTGAACTGTGGGGGCCTGTGGTTGACAGGCCTGTGAAATCCCCTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR CCA 90 bp | CACAGGCCTGTCAACCACAGGCCCCCACAGTTCAGTTTCCCTATGGCTCAGGGTAGCCTGGTGCAGGGGTaGTTCCACGTCGATGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: HRPVNHRPPQFSFPMAQGSLVQG*FHVDVH Trigger: GTGGACATCGACGTGGAACCACCCCTGCACCAGGCT...ACCCTGAGCCATAGGGAAACTGAACTGTGGGGGCCTGTGGTTGACAGGCCTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR TCA 90 bp | GACAGGGGATTTCACAGGCCTGTCAACCACAGGCCCCCACAGTTCAGTTTCCCTGTTGACGACAGGCGGTaGGGTCTAGCTCCTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: DRGFHRPVNHRPPQFSFPVDDRR*GLAPPE Trigger: CTCTGGAGGAGCTAGACCTCACCGCCTGTCGTCAAC...AGGGAAACTGAACTGTGGGGGCCTGTGGTTGACAGGCCTGTGAAATCCCCTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR TCA 90 bp | CAGTTCAGTTTCCCTATGGCTCAGGGTCAAGCCCGGGCTACACAGTCCAGCTGTGCCTCGTCCTTGAGTTaGCGACAGGCGGTGAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: QFSFPMAQGQARATQSSCASSLS*RQAVRS Trigger: AGACCTCACCGCCTGTCGTCAACTCAAGGACGAGGC...ACAGCTGGACTGTGTAGCCCGGGCTTGACCCTGAGCCATAGGGAAACTGAACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR TCA 90 bp | GGGATTTCACAGGCCTGTCAACCACAGGCCCCCACAGTTCAGTTTCCCTATGGCGCCTCGTCCTTGAGTTaGCGACAGGCGGTGAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: GISQACQPQAPTVQFPYGASSLS*RQAVRS Trigger: AGACCTCACCGCCTGTCGTCAACTCAAGGACGAGGC...GCCATAGGGAAACTGAACTGTGGGGGCCTGTGGTTGACAGGCCTGTGAAATCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR GCA 90 bp | CAGTTCAGTTTCCCTATGGCTCAGGGTCAAGCCCGGGCTACACAGTCCAGCTGTACAGCTCCTGGTTCTTaGTCCCCTCCGGACTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: QFSFPMAQGQARATQSSCTAPGS*SPPDCS Trigger: GGAGCAGTCCGGAGGGGAGCAAGAACCAGGAGCTGT...ACAGCTGGACTGTGTAGCCCGGGCTTGACCCTGAGCCATAGGGAAACTGAACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR GCA 90 bp | TTCACAGGCCTGTCAACCACAGGCCCCCACAGTTCAGTTTCCCTATGGCTCAGGACCCAGTTCAGGACGTaGGGGAGCAGCACGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: FTGLSTTGPHSSVSLWLRTQFRT*GSSTSS Trigger: GGAAGACGTGCTGCTCCCGCACGTCCTGAACTGGGT...CCTGAGCCATAGGGAAACTGAACTGTGGGGGCCTGTGGTTGACAGGCCTGTGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR GCA 90 bp | TTCACAGGCCTGTCAACCACAGGCCCCCACAGTTCAGTTTCCCTATGGCTCAGGCCGGTGAGGTCTAGGTaGTCGAGCTGCGGGCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: FTGLSTTGPHSSVSLWLRPVRSR*SSCGQF Trigger: AAACTGCCCGCAGCTCGAGCACCTAGACCTCACCGG...CCTGAGCCATAGGGAAACTGAACTGTGGGGGCCTGTGGTTGACAGGCCTGTGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR CCA 90 bp | TTCAGTTTCCCTATGGCTCAGGGTCAAGCCCGGGCTACACAGTCCAGCTGTGCTAGCCTGGTGCAGGGGTaGTTCCACGTCGATGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: FSFPMAQGQARATQSSCASLVQG*FHVDVH Trigger: GTGGACATCGACGTGGAACCACCCCTGCACCAGGCT...AGCACAGCTGGACTGTGTAGCCCGGGCTTGACCCTGAGCCATAGGGAAACTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR TCA 90 bp | ACAGGGGATTTCACAGGCCTGTCAACCACAGGCCCCCACAGTTCAGTTTCCCTAGCAGGTCCAGGAGCCTaGCAGCTCCTGGTTCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: TGDFTGLSTTGPHSSVSLAGPGA*QLLVLA Trigger: AGCAAGAACCAGGAGCTGTCAGGCTCCTGGACCTGC...TAGGGAAACTGAACTGTGGGGGCCTGTGGTTGACAGGCCTGTGAAATCCCCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR CCA 90 bp | ACAGGGGATTTCACAGGCCTGTCAACCACAGGCCCCCACAGTTCAGTTTCCCTAGAGCCTGACAGCTCCTaGTTCTTGCTCCCCTCCGGA | + |
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Preference number: 4 (lower is better) Translates to: TGDFTGLSTTGPHSSVSLEPDSS*FLLPSG Trigger: TCCGGAGGGGAGCAAGAACCAGGAGCTGTCAGGCTC...TAGGGAAACTGAACTGTGGGGGCCTGTGGTTGACAGGCCTGTGAAATCCCCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR CCA 90 bp | TTATTTGAAATTCCAGGGTGGGACAGGGGATTTCACAGGCCTGTCAACCACAGGTGCAGCCGGAGCAGCTaGCGCAGCGGGACCCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: LFEIPGWDRGFHRPVNHRCSRSS*RSGTQF Trigger: GAACTGGGTCCCGCTGCGCCAGCTGCTCCGGCTGCA...CCTGTGGTTGACAGGCCTGTGAAATCCCCTGTCCCACCCTGGAATTTCAAATAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR TCA 90 bp | TTATTTGAAATTCCAGGGTGGGACAGGGGATTTCACAGGCCTGTCAACCACAGGTCCGACAGCCATTCGTaGCACGGAGCCAGCGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LFEIPGWDRGFHRPVNHRSDSHS*HGASAS Trigger: GCTGGCGCTGGCTCCGTGTCACGAATGGCTGTCGGA...CCTGTGGTTGACAGGCCTGTGAAATCCCCTGTCCCACCCTGGAATTTCAAATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR TCA 90 bp | AGGCCTGTCAACCACAGGCCCCCACAGTTCAGTTTCCCTATGGCTCAGGGTCAATTTCGAGCCAACTCTTaGACCGCAGTGTCCCCAACA | + |
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Preference number: 4 (lower is better) Translates to: RPVNHRPPQFSFPMAQGQFRANS*TAVSPT Trigger: TGTTGGGGACACTGCGGTTCAAGAGTTGGCTCGAAA...TTGACCCTGAGCCATAGGGAAACTGAACTGTGGGGGCCTGTGGTTGACAGGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR GCA 90 bp | TTATTTGAAATTCCAGGGTGGGACAGGGGATTTCACAGGCCTGTCAACCACAGGAGCACCAGAGCCTGGTaGAGGGGTGGTTCCACGTCG | + |
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Preference number: 4 (lower is better) Translates to: LFEIPGWDRGFHRPVNHRSTRAW*RGGSTS Trigger: CGACGTGGAACCACCCCTGCACCAGGCTCTGGTGCT...CCTGTGGTTGACAGGCCTGTGAAATCCCCTGTCCCACCCTGGAATTTCAAATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR CCA 90 bp | GCTCTTTATTTGAAATTCCAGGGTGGGACAGGGGATTTCACAGGCCTGTCAACCTACGCTCCGGAGCTGTaGATTCCGTGCCAGCACCGG | + |
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Preference number: 4 (lower is better) Translates to: ALYLKFQGGTGDFTGLSTYAPEL*IPCQHR Trigger: CCGGTGCTGGCACGGAATCCACAGCTCCGGAGCGTA...GGTTGACAGGCCTGTGAAATCCCCTGTCCCACCCTGGAATTTCAAATAAAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR GCA 90 bp | AGCTCTTTATTTGAAATTCCAGGGTGGGACAGGGGATTTCACAGGCCTGTCAACACAGCTCCTGGTTCTTaGTCCCCTCCGGACTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SSLFEIPGWDRGFHRPVNTAPGS*SPPDCS Trigger: GGAGCAGTCCGGAGGGGAGCAAGAACCAGGAGCTGT...GTTGACAGGCCTGTGAAATCCCCTGTCCCACCCTGGAATTTCAAATAAAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR TCA 90 bp | AAAGCTCTTTATTTGAAATTCCAGGGTGGGACAGGGGATTTCACAGGCCTGTCAGCAGGTCCAGGAGCCTaGCAGCTCCTGGTTCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: KALYLKFQGGTGDFTGLSAGPGA*QLLVLA Trigger: AGCAAGAACCAGGAGCTGTCAGGCTCCTGGACCTGC...TGACAGGCCTGTGAAATCCCCTGTCCCACCCTGGAATTTCAAATAAAGAGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR GCA 90 bp | AAAAGCTCTTTATTTGAAATTCCAGGGTGGGACAGGGGATTTCACAGGCCTGTCACCCAGTTCAGGACGTaGGGGAGCAGCACGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: KSSLFEIPGWDRGFHRPVTQFRT*GSSTSS Trigger: GGAAGACGTGCTGCTCCCGCACGTCCTGAACTGGGT...GACAGGCCTGTGAAATCCCCTGTCCCACCCTGGAATTTCAAATAAAGAGCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR TCA 90 bp | AAAAGCTCTTTATTTGAAATTCCAGGGTGGGACAGGGGATTTCACAGGCCTGTCTTTCGAGCCAACTCTTaGACCGCAGTGTCCCCAACA | + |
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Preference number: 4 (lower is better) Translates to: KSSLFEIPGWDRGFHRPVFRANS*TAVSPT Trigger: TGTTGGGGACACTGCGGTTCAAGAGTTGGCTCGAAA...GACAGGCCTGTGAAATCCCCTGTCCCACCCTGGAATTTCAAATAAAGAGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS CCA 90 bp | CGCGGGCAGCCCTCAGCCAGCGCCCCCAGGGCTCGGCGACTCAGTTaGCCGCAGCCGGCCAGCGCTACGCTCCGGAGCTGTGGATTCCGT | + |
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Preference number: 5 (lower is better) Translates to: RGQPSASAPRARRLS*PQPASATLRSCGFR Trigger: ACGGAATCCACAGCTCCGGAGCGTAGCGCTGGCCGGCTGCGGCCAACTGAGTCGCCGAGCCCTGGGGGCGCTGGCTGAGGGCTGCCCGCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS CCA 90 bp | ACGAGCGCCCGGAAGGCGCGACTGACGCGCTGCAGCCGGAGCAGCTaGCGCAGCGGGACCCAGTTCAGGACGTGCGGGAGCAGCACGTCT | + |
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Preference number: 5 (lower is better) Translates to: TSARKARLTRCSRSS*RSGTQFRTCGSSTS Trigger: AGACGTGCTGCTCCCGCACGTCCTGAACTGGGTCCCGCTGCGCCAGCTGCTCCGGCTGCAGCGCGTCAGTCGCGCCTTCCGGGCGCTCGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS TCA 90 bp | GCAGCCTCGCCAAGTGCAGCTGAACGAGCGCCCGGAAGGCGCGACTaGCGCGCTGCAGCCGGAGCAGCTGGCGCAGCGGGACCCAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: AASPSAAERAPGRRD*RAAAGAAGAAGPSS Trigger: TGAACTGGGTCCCGCTGCGCCAGCTGCTCCGGCTGCAGCGCGTCAGTCGCGCCTTCCGGGCGCTCGTTCAGCTGCACTTGGCGAGGCTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS TCA 90 bp | CGGTCAGCGAGGCCACGCAGTGCCAGCCCGTCCACCCAGTCACAGTaGGCGAGGGAAAGGCGCTGCAGACGCGGGCAGCCCTCAGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: RSARPRSASPSTQSQ*ARERRCRRGQPSAS Trigger: GCTGGCTGAGGGCTGCCCGCGTCTGCAGCGCCTTTCCCTCGCTCACTGTGACTGGGTGGACGGGCTGGCACTGCGTGGCCTCGCTGACCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS CCA 90 bp | GCGACTCAGTTGGCCGCAGCCGGCCAGCGCTACGCTCCGGAGCTGTaGATTCCGTGCCAGCACCGGCACCAGGTCCTCGTCCGACAGCCA | + |
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Preference number: 5 (lower is better) Translates to: ATQLAAAGQRYAPEL*IPCQHRHQVLVRQP Trigger: TGGCTGTCGGACGAGGACCTGGTGCCGGTGCTGGCACGGAATCCACAGCTCCGGAGCGTAGCGCTGGCCGGCTGCGGCCAACTGAGTCGC 70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS CCA 90 bp | ACACCACGCTTCCGCAAGCGGCTCAGGCTCGGTTCAGCCACATGGTaGCAGTGCCGCACCCGCAGAGAGCGCAGCGCCGGGCAGTACTCG | + |
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Preference number: 5 (lower is better) Translates to: TPRFRKRLRLGSATW*QCRTRRERSAGQYS Trigger: CGAGTACTGCCCGGCGCTGCGCTCTCTGCGGGTGCGGCACTGCCACCATGTGGCTGAACCGAGCCTGAGCCGCTTGCGGAAGCGTGGTGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS CCA 90 bp | TCCACACCACGCTTCCGCAAGCGGCTCAGGCTCGGTTCAGCCACATaGTGGCAGTGCCGCACCCGCAGAGAGCGCAGCGCCGGGCAGTAC | + |
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Preference number: 5 (lower is better) Translates to: STPRFRKRLRLGSAT*WQCRTRRERSAGQY Trigger: GTACTGCCCGGCGCTGCGCTCTCTGCGGGTGCGGCACTGCCACCATGTGGCTGAACCGAGCCTGAGCCGCTTGCGGAAGCGTGGTGTGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS TCA 90 bp | GCGCCGCGTCTCTGCGCCAGGTACACGATGGCCTCGTCCTTGAGTTaGCGACAGGCGGTGAGGTCTAGCTCCTCCAGAGCCGGGCAGCGG | + |
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Preference number: 5 (lower is better) Translates to: APRLCARYTMASSLS*RQAVRSSSSRAGQR Trigger: CCGCTGCCCGGCTCTGGAGGAGCTAGACCTCACCGCCTGTCGTCAACTCAAGGACGAGGCCATCGTGTACCTGGCGCAGAGACGCGGCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS GCA 90 bp | TTGGCCGCAGCCGGCCAGCGCTACGCTCCGGAGCTGTGGATTCCGTaGCAGCACCGGCACCAGGTCCTCGTCCGACAGCCATTCGTGACA | + |
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Preference number: 5 (lower is better) Translates to: LAAAGQRYAPELWIP*QHRHQVLVRQPFVT Trigger: TGTCACGAATGGCTGTCGGACGAGGACCTGGTGCCGGTGCTGGCACGGAATCCACAGCTCCGGAGCGTAGCGCTGGCCGGCTGCGGCCAA 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR CAA 90 bp | CCTGTCAACCACAGGCCCCCACAGTTCAGTTTCCCTATGGCTCAGGGTCAAGCCGGCTCGGCGACTCAGTaGGCCGCAGCCGGCCAGCGC | + |
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Preference number: 5 (lower is better) Translates to: PVNHRPPQFSFPMAQGQAGSATQ*AAAGQR Trigger: GCGCTGGCCGGCTGCGGCCAACTGAGTCGCCGAGCC...GGCTTGACCCTGAGCCATAGGGAAACTGAACTGTGGGGGCCTGTGGTTGACAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR CAA 90 bp | ATGGCTCAGGGTCAAGCCCGGGCTACACAGTCCAGCTGTGCTCCCACCCCAAGGGACAGCTCCTGGTTCTaGCTCCCCTCCGGACTGCTC | + |
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Preference number: 5 (lower is better) Translates to: MAQGQARATQSSCAPTPRDSSWF*LPSGLL Trigger: GAGCAGTCCGGAGGGGAGCAAGAACCAGGAGCTGTC...CCTTGGGGTGGGAGCACAGCTGGACTGTGTAGCCCGGGCTTGACCCTGAGCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR CAA 90 bp | ATTTCACAGGCCTGTCAACCACAGGCCCCCACAGTTCAGTTTCCCTATGGCTCAGGCTCGGCGACTCAGTaGGCCGCAGCCGGCCAGCGC | + |
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Preference number: 5 (lower is better) Translates to: ISQACQPQAPTVQFPYGSGSATQ*AAAGQR Trigger: GCGCTGGCCGGCTGCGGCCAACTGAGTCGCCGAGCC...TGAGCCATAGGGAAACTGAACTGTGGGGGCCTGTGGTTGACAGGCCTGTGAAAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS TCA 90 bp | AGTTTCGAGCCAACTCTTGAACCGCAGTGTCCCCAACATTGGCGTTaGCTGCTAATGAGAGGCTGCGGAGGCCCGCGCCGCGTCTCTGCG | + |
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Preference number: 5 (lower is better) Translates to: SFEPTLEPQCPQHWR*LLMRGCGGPRRVSA Trigger: CGCAGAGACGCGGCGCGGGCCTCCGCAGCCTCTCATTAGCAGTCAACGCCAATGTTGGGGACACTGCGGTTCAAGAGTTGGCTCGAAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR CAA 90 bp | TTTCACAGGCCTGTCAACCACAGGCCCCCACAGTTCAGTTTCCCTATGGCTCAGGACAGCTCCTGGTTCTaGCTCCCCTCCGGACTGCTC | + |
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Preference number: 5 (lower is better) Translates to: FHRPVNHRPPQFSFPMAQDSSWF*LPSGLL Trigger: GAGCAGTCCGGAGGGGAGCAAGAACCAGGAGCTGTC...CTGAGCCATAGGGAAACTGAACTGTGGGGGCCTGTGGTTGACAGGCCTGTGAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR CAA 90 bp | ATTCCAGGGTGGGACAGGGGATTTCACAGGCCTGTCAACCACAGGCCCCCACAGGTTTCGAGCCAACTCTaGAACCGCAGTGTCCCCAAC | + |
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Preference number: 5 (lower is better) Translates to: IPGWDRGFHRPVNHRPPQVSSQL*NRSVPN Trigger: GTTGGGGACACTGCGGTTCAAGAGTTGGCTCGAAAC...CTGTGGGGGCCTGTGGTTGACAGGCCTGTGAAATCCCCTGTCCCACCCTGGAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR CAA 90 bp | CACAGGCCTGTCAACCACAGGCCCCCACAGTTCAGTTTCCCTATGGCTCAGGGTGTTTCGAGCCAACTCTaGAACCGCAGTGTCCCCAAC | + |
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Preference number: 5 (lower is better) Translates to: HRPVNHRPPQFSFPMAQGVSSQL*NRSVPN Trigger: GTTGGGGACACTGCGGTTCAAGAGTTGGCTCGAAAC...ACCCTGAGCCATAGGGAAACTGAACTGTGGGGGCCTGTGGTTGACAGGCCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS TCA 90 bp | GTGAGGTCTAGGTGCTCGAGCTGCGGGCAGTTTCGAGCCAACTCTTaGACCGCAGTGTCCCCAACATTGGCGTTGACTGCTAATGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: VRSRCSSCGQFRANS*TAVSPTLALTANER Trigger: CCTCTCATTAGCAGTCAACGCCAATGTTGGGGACACTGCGGTTCAAGAGTTGGCTCGAAACTGCCCGCAGCTCGAGCACCTAGACCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR CAA 90 bp | TTATTTGAAATTCCAGGGTGGGACAGGGGATTTCACAGGCCTGTCAACCACAGGGGCCTCGTCCTTGAGTaGACGACAGGCGGTGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: LFEIPGWDRGFHRPVNHRGLVLE*TTGGEV Trigger: GACCTCACCGCCTGTCGTCAACTCAAGGACGAGGCC...CCTGTGGTTGACAGGCCTGTGAAATCCCCTGTCCCACCCTGGAATTTCAAATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR CAA 90 bp | AGGGGATTTCACAGGCCTGTCAACCACAGGCCCCCACAGTTCAGTTTCCCTATGGCAGTGTCCCCAACATaGGCGTTGACTGCTAATGAG | + |
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Preference number: 5 (lower is better) Translates to: RGFHRPVNHRPPQFSFPMAVSPT*ALTANE Trigger: CTCATTAGCAGTCAACGCCAATGTTGGGGACACTGC...CATAGGGAAACTGAACTGTGGGGGCCTGTGGTTGACAGGCCTGTGAAATCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS-3UTR CAA 90 bp | ACAGGGGATTTCACAGGCCTGTCAACCACAGGCCCCCACAGTTCAGTTTCCCTAGCAGTGTCCCCAACATaGGCGTTGACTGCTAATGAG | + |
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Preference number: 5 (lower is better) Translates to: TGDFTGLSTTGPHSSVSLAVSPT*ALTANE Trigger: CTCATTAGCAGTCAACGCCAATGTTGGGGACACTGC...TAGGGAAACTGAACTGTGGGGGCCTGTGGTTGACAGGCCTGTGAAATCCCCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS CCA 72 bp | CCCTCAGCCAGCGCCCCCAGGGCTCGGCGACTCAGTTaGCCGCAGCCGGCCAGCGCTACGCTCCGGAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: PSASAPRARRLS*PQPASATLRSC Trigger: ACAGCTCCGGAGCGTAGCGCTGGCCGGCTGCGGCCAACTGAGTCGCCGAGCCCTGGGGGCGCTGGCTGAGGG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS CAA 90 bp | ACGCGGGCAGCCCTCAGCCAGCGCCCCCAGGGCTCGGCGACTCAGTaGGCCGCAGCCGGCCAGCGCTACGCTCCGGAGCTGTGGATTCCG | + |
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Preference number: 6 (lower is better) Translates to: TRAALSQRPQGSATQ*AAAGQRYAPELWIP Trigger: CGGAATCCACAGCTCCGGAGCGTAGCGCTGGCCGGCTGCGGCCAACTGAGTCGCCGAGCCCTGGGGGCGCTGGCTGAGGGCTGCCCGCGT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS TCA 72 bp | GCGGCGTCGAAGCGGCGCAGCCTCGCCAAGTGCAGCTaGACGAGCGCCCGGAAGGCGCGACTGACGCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: AASKRRSLAKCS*TSARKARLTRC Trigger: GCAGCGCGTCAGTCGCGCCTTCCGGGCGCTCGTTCAGCTGCACTTGGCGAGGCTGCGCCGCTTCGACGCCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS TCA 72 bp | AGGCCACGCAGTGCCAGCCCGTCCACCCAGTCACAGTaGGCGAGGGAAAGGCGCTGCAGACGCGGGCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: RPRSASPSTQSQ*ARERRCRRGQP Trigger: GGGCTGCCCGCGTCTGCAGCGCCTTTCCCTCGCTCACTGTGACTGGGTGGACGGGCTGGCACTGCGTGGCCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS GCA 72 bp | GCCGGCCAGCGCTACGCTCCGGAGCTGTGGATTCCGTaGCAGCACCGGCACCAGGTCCTCGTCCGACAGCCA | + |
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Preference number: 6 (lower is better) Translates to: AGQRYAPELWIP*QHRHQVLVRQP Trigger: TGGCTGTCGGACGAGGACCTGGTGCCGGTGCTGGCACGGAATCCACAGCTCCGGAGCGTAGCGCTGGCCGGC 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS CCA 72 bp | TTGGCCGCAGCCGGCCAGCGCTACGCTCCGGAGCTGTaGATTCCGTGCCAGCACCGGCACCAGGTCCTCGTC | + |
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Preference number: 6 (lower is better) Translates to: LAAAGQRYAPEL*IPCQHRHQVLV Trigger: GACGAGGACCTGGTGCCGGTGCTGGCACGGAATCCACAGCTCCGGAGCGTAGCGCTGGCCGGCTGCGGCCAA 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS CCA 72 bp | CGCTTCCGCAAGCGGCTCAGGCTCGGTTCAGCCACATaGTGGCAGTGCCGCACCCGCAGAGAGCGCAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: RFRKRLRLGSAT*WQCRTRRERSA Trigger: GGCGCTGCGCTCTCTGCGGGTGCGGCACTGCCACCATGTGGCTGAACCGAGCCTGAGCCGCTTGCGGAAGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS TCA 72 bp | CTCTGCGCCAGGTACACGATGGCCTCGTCCTTGAGTTaGCGACAGGCGGTGAGGTCTAGCTCCTCCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: LCARYTMASSLS*RQAVRSSSSRA Trigger: GGCTCTGGAGGAGCTAGACCTCACCGCCTGTCGTCAACTCAAGGACGAGGCCATCGTGTACCTGGCGCAGAG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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| CDS TCA 72 bp | AGGTGCTCGAGCTGCGGGCAGTTTCGAGCCAACTCTTaGACCGCAGTGTCCCCAACATTGGCGTTGACTGCT | + |
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Preference number: 6 (lower is better) Translates to: RCSSCGQFRANS*TAVSPTLALTA Trigger: AGCAGTCAACGCCAATGTTGGGGACACTGCGGTTCAAGAGTTGGCTCGAAACTGCCCGCAGCTCGAGCACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026256.9 ENSMUST00000177667.2 |
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