Pregenerated sensors for FBXL13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048520Ensembl transcript IDs: ENSMUST00000051358.11, ENSMUST00000115234.2
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCATCAAATTTACACTTCATCAGACCTGCAGTCCAGGCTGTTGTTTaGCTGCCCTGGCTGCGGACAGAGTTGACTCACTTTAGATCGACT | + |
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Preference number: 1 (lower is better) Translates to: PSNLHFIRPAVQAVV*LPWLRTELTHFRST Trigger: AGTCGATCTAAAGTGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGGTCTGATGAAGTGTAAATTTGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| 3UTR GCA 90 bp | ATTCTGAGTGTTAAGTCTGCCATCAAATTTACACTTCATCAGACCTaGAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTT | + |
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Preference number: 1 (lower is better) Translates to: ILSVKSAIKFTLHQT*SPGCCLAALAADRV Trigger: AACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGGTCTGATGAAGTGTAAATTTGATGGCAGACTTAACACTCAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| 3UTR-3UTR TCA 90 bp | ACCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCACGACTGAGGTTAAATTaGCAGCTGTTGTACCAATGT | + |
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Preference number: 2 (lower is better) Translates to: TCSPGCCLAALAADRVDSRLRLN*QLLYQC Trigger: ACATTGGTACAACAGCTGTCAATTTAACCTCAGTCG...TGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCACTCGACTGAGGTTAAATaGACAGCTGTTGTACCAATG | + |
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Preference number: 3 (lower is better) Translates to: PAVQAVVWLPWLRTELTHSTEVK*TAVVPM Trigger: CATTGGTACAACAGCTGTCAATTTAACCTCAGTCGA...GTGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| 3UTR GCA 72 bp | GTTAAGTCTGCCATCAAATTTACACTTCATCAGACCTaGAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCG | + |
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Preference number: 3 (lower is better) Translates to: VKSAIKFTLHQT*SPGCCLAALAA Trigger: CGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGGTCTGATGAAGTGTAAATTTGATGGCAGACTTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR TCA 90 bp | CCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCACCCTGAAGCCTTGGACTaGGATCTGGGTGCAGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: PAVQAVVWLPWLRTELTHPEALD*DLGAAG Trigger: TCCGGCTGCACCCAGATCTCAGTCCAAGGCTTCAGG...GTGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR CCA 90 bp | CCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCACCCTTGGACTGAGATCTaGGTGCAGCCGGAAAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: PAVQAVVWLPWLRTELTHPWTEI*VQPERS Trigger: GGACCTTTCCGGCTGCACCCAGATCTCAGTCCAAGG...GTGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR GCA 90 bp | CCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCACGGACTGAGATCTGGGTaGAGCCGGAAAGGTCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: PAVQAVVWLPWLRTELTHGLRSG*SRKGPD Trigger: ATCTGGACCTTTCCGGCTGCACCCAGATCTCAGTCC...GTGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR CCA 90 bp | ACCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCATCCTTAGCCTGGGGGTaGCACTGCGTAGTGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: TCSPGCCLAALAADRVDSSLAWG*HCVVKP Trigger: TGGCTTCACTACGCAGTGCCACCCCCAGGCTAAGGA...TGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR CCA 90 bp | CCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCACAGTTGTGGAAGTACCTaGGTAGGAGTCGCATGGTCC | + |
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Preference number: 4 (lower is better) Translates to: PAVQAVVWLPWLRTELTHSCGST*VGVAWS Trigger: GGACCATGCGACTCCTACCCAGGTACTTCCACAACT...GTGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR TCA 90 bp | CCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCACGAATGTACTTGTCCCTaGAGTAGCTCCTTAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PAVQAVVWLPWLRTELTHECTCP*SSSLAW Trigger: CCAGGCTAAGGAGCTACTTCAGGGACAAGTACATTC...GTGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR TCA 90 bp | CCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCACAAAGGTCCAGATAGATaGGCTTGTGGCATCCGTTCC | + |
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Preference number: 4 (lower is better) Translates to: PAVQAVVWLPWLRTELTHKGPDR*ACGIRS Trigger: GGAACGGATGCCACAAGCTCATCTATCTGGACCTTT...GTGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR TCA 90 bp | CCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCACGGAATCGCCCAGCAGTaGGCAGTTAGTCAAATTGAG | + |
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Preference number: 4 (lower is better) Translates to: PAVQAVVWLPWLRTELTHGIAQQ*AVSQIE Trigger: CTCAATTTGACTAACTGCTCACTGCTGGGCGATTCC...GTGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR CCA 90 bp | CCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCACATGTTCCTGAAGCCTTaGACTGAGATCTGGGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: PAVQAVVWLPWLRTELTHMFLKP*TEIWVQ Trigger: CTGCACCCAGATCTCAGTCCAAGGCTTCAGGAACAT...GTGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR TCA 90 bp | ACCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCAAGCGCCTCACAGATTTaGGGAATGTACTTGTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: TCSPGCCLAALAADRVDSSASQI*GMYLSL Trigger: CAGGGACAAGTACATTCCTCAAATCTGTGAGGCGCT...TGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR TCA 90 bp | CCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCACTTGTGTTGGATAGATTaGGATACAGGACCCCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: PAVQAVVWLPWLRTELTHLCWID*DTGPQD Trigger: GTCCTGGGGTCCTGTATCTCAATCTATCCAACACAA...GTGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR TCA 90 bp | ACCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCAGGCAGTAAGCCAGACTaGGGTTCTGTAAGTTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: TCSPGCCLAALAADRVDSGSKPD*GSVSCG Trigger: TCCACAACTTACAGAACCTCAGTCTGGCTTACTGCC...TGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR TCA 90 bp | CCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCACAAAGTGAAAGTGACTTaGGGCTGCTGTCTGTTAGCC | + |
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Preference number: 4 (lower is better) Translates to: PAVQAVVWLPWLRTELTHKVKVT*GCCLLA Trigger: GGCTAACAGACAGCAGCCTCAAGTCACTTTCACTTT...GTGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR GCA 90 bp | CCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCACTCAGTGATGGATGGATaGACGTGTCCCAAAGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: PAVQAVVWLPWLRTELTHSVMDG*TCPKEG Trigger: ACCTTCTTTGGGACACGTGCATCCATCCATCACTGA...GTGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR TCA 90 bp | CCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCACTCATGGATTCATCTGTaGAAGACTGGCAGTCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: PAVQAVVWLPWLRTELTHSWIHL*KTGSQR Trigger: TCTCTGACTGCCAGTCTTTCACAGATGAATCCATGA...GTGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR TCA 90 bp | ACCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCAGCATGGTCCTGTTGGTaGTGGTTGTGTTGGATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TCSPGCCLAALAADRVDSAWSCW*WLCWID Trigger: ATCTATCCAACACAACCATCACCAACAGGACCATGC...TGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR GCA 90 bp | ACCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCACAGCCCTCAGAAATGTaGCTCATGGATTCATCTGTG | + |
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Preference number: 4 (lower is better) Translates to: TCSPGCCLAALAADRVDSQPSEM*LMDSSV Trigger: CACAGATGAATCCATGAGGCACATTTCTGAGGGCTG...TGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR TCA 90 bp | CCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCACATCACTTGCCTCATTTaGGATGAGTGTTCCAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: PAVQAVVWLPWLRTELTHITCLI*DECSRK Trigger: CTTTCTGGAACACTCATCTCAAATGAGGCAAGTGAT...GTGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR CCA 90 bp | CCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCACTTTTATCATCAACTCTaGAGTCACCAGCTGGTCATC | + |
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Preference number: 4 (lower is better) Translates to: PAVQAVVWLPWLRTELTHFYHQL*SHQLVI Trigger: GATGACCAGCTGGTGACTCCAGAGTTGATGATAAAA...GTGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR CCA 90 bp | ACCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCAAGGTTCTGTAAGTTGTaGAAGTACCTGGGTAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: TCSPGCCLAALAADRVDSRFCKL*KYLGRS Trigger: ACTCCTACCCAGGTACTTCCACAACTTACAGAACCT...TGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| 3UTR CAA 72 bp | TTTACACTTCATCAGACCTGCAGTCCAGGCTGTTGTTaGGCTGCCCTGGCTGCGGACAGAGTTGACTCACTT | + |
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Preference number: 4 (lower is better) Translates to: FTLHQTCSPGCC*AALAADRVDSL Trigger: AAGTGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGGTCTGATGAAGTGTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR TCA 90 bp | CCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCACCCATGTAAATGTGATTaGTGCCTGGATAATTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: PAVQAVVWLPWLRTELTHPCKCD*CLDNSC Trigger: ACAGGAATTATCCAGGCATCAATCACATTTACATGG...GTGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR GCA 90 bp | CCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCACGATCTCCTCTTGATTTaGACGAGGTATTGCAACTTT | + |
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Preference number: 4 (lower is better) Translates to: PAVQAVVWLPWLRTELTHDLLLI*TRYCNF Trigger: AAAGTTGCAATACCTCGTGCAAATCAAGAGGAGATC...GTGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR GCA 90 bp | ACCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCATGTCTGTTAGCCCTTTaGAGTCCACCATGTAAATGT | + |
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Preference number: 4 (lower is better) Translates to: TCSPGCCLAALAADRVDSCLLAL*SPPCKC Trigger: ACATTTACATGGTGGACTGCAAAGGGCTAACAGACA...TGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR TCA 90 bp | CCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCACCTGAAGTTCATGTTTTaGAATCAAGTCGTCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: PAVQAVVWLPWLRTELTHLKFMF*NQVVFS Trigger: AGAGAAGACGACTTGATTTCAAAACATGAACTTCAG...GTGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR TCA 90 bp | ACCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCATTGCCTCATTTGAGATaGGTGTTCCAGAAAGATCTA | + |
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Preference number: 4 (lower is better) Translates to: TCSPGCCLAALAADRVDSLPHLR*VFQKDL Trigger: TAGATCTTTCTGGAACACTCATCTCAAATGAGGCAA...TGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR GCA 90 bp | CCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCACATAGCTAGGATCATGTaGTCTAAATATTTCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: PAVQAVVWLPWLRTELTHIARIM*SKYFSG Trigger: CCCACTGAAATATTTAGAGCACATGATCCTAGCTAT...GTGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR CCA 90 bp | ACCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCATGCAAGTTTTTACAGTaGCTGACAGCTTTCAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: TCSPGCCLAALAADRVDSCKFLQ*LTAFKV Trigger: AACCTTGAAAGCTGTCAGCCACTGTAAAAACTTGCA...TGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR GCA 90 bp | ACCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCACACCACACATTTATCTaGAATGTTTTTAACTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: TCSPGCCLAALAADRVDSHHTFI*NVFNCG Trigger: TCCACAGTTAAAAACATTGCAGATAAATGTGTGGTG...TGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR GCA 90 bp | ACCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCATTCAACACTGTCAATTaGTTCAAAAGTGAAAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: TCSPGCCLAALAADRVDSFNTVN*FKSESD Trigger: GTCACTTTCACTTTTGAAGCAATTGACAGTGTTGAA...TGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR GCA 90 bp | ACCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCATGCAATATATTCAATTaGCAAGTCAGTCAGATGTTC | + |
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Preference number: 4 (lower is better) Translates to: TCSPGCCLAALAADRVDSCNIFN*QVSQMF Trigger: GAACATCTGACTGACTTGGCAATTGAATATATTGCA...TGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS-3UTR CCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCATCCTTAGCCTGGGGGTaGCACTGCGTAGTGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSSLAWG*HCVVKP Trigger: TGGCTTCACTACGCAGTGCCACCCCCAGGCTAAGGA...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS-3UTR TCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCATCGGAGTTGTATTCCTaGTGCTGGACCACAGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSSELYS*CWTTED Trigger: GTCCTCTGTGGTCCAGCATCAGGAATACAACTCCGA...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS-3UTR CCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCAAGTTGTGGAAGTACCTaGGTAGGAGTCGCATGGTCC | + |
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Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSSCGST*VGVAWS Trigger: GGACCATGCGACTCCTACCCAGGTACTTCCACAACT...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS-3UTR TCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCAGAATGTACTTGTCCCTaGAGTAGCTCCTTAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSECTCP*SSSLAW Trigger: CCAGGCTAAGGAGCTACTTCAGGGACAAGTACATTC...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS-3UTR TCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCAAGCGCCTCACAGATTTaGGGAATGTACTTGTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSSASQI*GMYLSL Trigger: CAGGGACAAGTACATTCCTCAAATCTGTGAGGCGCT...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS-3UTR TCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCAGGCAGTAAGCCAGACTaGGGTTCTGTAAGTTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSGSKPD*GSVSCG Trigger: TCCACAACTTACAGAACCTCAGTCTGGCTTACTGCC...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS-3UTR TCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCAAAAGGTCCAGATAGATaGGCTTGTGGCATCCGTTCC | + |
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Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSKGPDR*ACGIRS Trigger: GGAACGGATGCCACAAGCTCATCTATCTGGACCTTT...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS-3UTR TCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCAGGAATCGCCCAGCAGTaGGCAGTTAGTCAAATTGAG | + |
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Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSGIAQQ*AVSQIE Trigger: CTCAATTTGACTAACTGCTCACTGCTGGGCGATTCC...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS-3UTR CCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCATTGGTGTTTGGAGTCTaGATCCTCCTCGTCGATGCT | + |
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Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSLVFGV*ILLVDA Trigger: AGCATCGACGAGGAGGATCCAGACTCCAAACACCAA...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS-3UTR TCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCAGCCATGATCTCCTCTTaGTTTGCACGAGGTATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSAMISS*FARGIA Trigger: TGCAATACCTCGTGCAAATCAAGAGGAGATCATGGC...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR TCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCATTGTGTTGGATAGATTaGGATACAGGACCCCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSLCWID*DTGPQD Trigger: GTCCTGGGGTCCTGTATCTCAATCTATCCAACACAA...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR TCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCAGCATGGTCCTGTTGGTaGTGGTTGTGTTGGATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSAWSCW*WLCWID Trigger: ATCTATCCAACACAACCATCACCAACAGGACCATGC...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR TCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCAAAAGTGAAAGTGACTTaGGGCTGCTGTCTGTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSKVKVT*GCCLLA Trigger: GGCTAACAGACAGCAGCCTCAAGTCACTTTCACTTT...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR TCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCAGGTCATGCCCTCATTTaGGATGAGTGTTCCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSGHALI*DECSRK Trigger: CTTTCTGGAACACTCATCTCAAATGAGGGCATGACC...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR TCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCATGCAGAATTGCATCTTaGGGATCCGGAGTTGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSCRIAS*GSGVVC Trigger: GCAAACAACTCCGGATCCTCAAGATGCAATTCTGCA...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR GCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCATCAGTGATGGATGGATaGACGTGTCCCAAAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSSVMDG*TCPKEG Trigger: ACCTTCTTTGGGACACGTGCATCCATCCATCACTGA...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR GCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCACAGCCCTCAGAAATGTaGCTCATGGATTCATCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSQPSEM*LMDSSV Trigger: CACAGATGAATCCATGAGGCACATTTCTGAGGGCTG...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR GCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCAGGATCCGGAGTTGTTTaGAGCCTATTTGAAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSGSGVV*SLFEGP Trigger: AGGACCTTCAAATAGGCTGCAAACAACTCCGGATCC...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR GCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCATCTTGTCAAGAGGGTTaGCTTCAGAGTCGTAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSSCQEG*LQSRSQ Trigger: TTGGCTACGACTCTGAAGGCAACCCTCTTGACAAGA...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR TCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCATCATGGATTCATCTGTaGAAGACTGGCAGTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSSWIHL*KTGSQR Trigger: TCTCTGACTGCCAGTCTTTCACAGATGAATCCATGA...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR GCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCAATGGACTTGCAGAATTaGATCTTGAGGATCCGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSMDLQN*ILRIRS Trigger: ACTCCGGATCCTCAAGATGCAATTCTGCAAGTCCAT...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR CCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCAAGGTTCTGTAAGTTGTaGAAGTACCTGGGTAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSRFCKL*KYLGRS Trigger: ACTCCTACCCAGGTACTTCCACAACTTACAGAACCT...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR TCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCATGCCCTCATTTGAGATaGGTGTTCCAGAAAGATCTA | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSCPHLR*VFQKDL Trigger: TAGATCTTTCTGGAACACTCATCTCAAATGAGGGCA...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR TCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCAAGTTGTACTCGACTATaGATCTTGTCAAGAGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSSCTRL*ILSRGL Trigger: CAACCCTCTTGACAAGATTCATAGTCGAGTACAACT...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR GCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCATGTCTGTTAGCCCTTTaGAGTCCACCATGTAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSCLLAL*SPPCKC Trigger: ACATTTACATGGTGGACTGCAAAGGGCTAACAGACA...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR CCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCATTTTATCATCAACTCTaGAGTCACCAGCTGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSFYHQL*SHQLVI Trigger: GATGACCAGCTGGTGACTCCAGAGTTGATGATAAAA...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR CCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCAAGGTACAAGAAAATCTaGAGTATTGCTTGCTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSRYKKI*SIACSG Trigger: ACCGGAGCAAGCAATACTCCAGATTTTCTTGTACCT...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR CCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCATCAGTTTTCTGTGTCTaGAAAGTATGGTCATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSSVFCV*KVWSCP Trigger: AGGGCATGACCATACTTTCCAGACACAGAAAACTGA...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR TCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCACCATGTAAATGTGATTaGTGCCTGGATAATTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSPCKCD*CLDNSC Trigger: ACAGGAATTATCCAGGCATCAATCACATTTACATGG...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR GCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCAGATCTCCTCTTGATTTaGACGAGGTATTGCAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSDLLLI*TRYCNF Trigger: AAAGTTGCAATACCTCGTGCAAATCAAGAGGAGATC...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR CCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCATGCAAGTTTTTACAGTaGCTGACAGCTTTCAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSCKFLQ*LTAFKV Trigger: AACCTTGAAAGCTGTCAGCCACTGTAAAAACTTGCA...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR TCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCACTGAAGTTCATGTTTTaGAATCAAGTCGTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSLKFMF*NQVVFS Trigger: AGAGAAGACGACTTGATTTCAAAACATGAACTTCAG...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR GCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCAATAGCTAGGATCATGTaGTCTAAATATTTCAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSIARIM*SKYFSG Trigger: CCCACTGAAATATTTAGAGCACATGATCCTAGCTAT...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR GCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCAAGTGTAAAATGTGCATaGTTTTATCATCAACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSSVKCA*FYHQLW Trigger: CCAGAGTTGATGATAAAAGCATGCACATTTTACACT...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR GCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCACACCACACATTTATCTaGAATGTTTTTAACTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSHHTFI*NVFNCG Trigger: TCCACAGTTAAAAACATTGCAGATAAATGTGTGGTG...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR GCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCATTCAACACTGTCAATTaGTTCAAAAGTGAAAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSFNTVN*FKSESD Trigger: GTCACTTTCACTTTTGAAGCAATTGACAGTGTTGAA...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR GCA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCATGCAATATATTCAATTaGCAAGTCAGTCAGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALLFDIVIENQQLTIFTSCNIFN*QVSQMF Trigger: GAACATCTGACTGACTTGGCAATTGAATATATTGCA...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR CAA 90 bp | CCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCACCAGCTTTCAAGGTTTTaGTTCGGAAGTCGCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PAVQAVVWLPWLRTELTHQLSRF*FGSRSL Trigger: GAGGCTGCGACTTCCGAACAAAAACCTTGAAAGCTG...GTGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
||
| CDS-3UTR CAA 90 bp | ACCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCAAGGTACTGTAAGCCTTaGTCGGTGAACTTTCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TCSPGCCLAALAADRVDSRYCKP*SVNFRQ Trigger: CTGCCGAAAGTTCACCGACAAAGGCTTACAGTACCT...TGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
||
| CDS GCA 90 bp | TTTACGCAGTTGTCCGTCAGAGTGGGCATGTCGTTGATAGTAAGGTaGACAATCCCCGTGCAGCTGCTGGCGATGTTCCTGAAGCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: FTQLSVRVGMSLIVR*TIPVQLLAMFLKPW Trigger: CCAAGGCTTCAGGAACATCGCCAGCAGCTGCACGGGGATTGTGCACCTTACTATCAACGACATGCCCACTCTGACGGACAACTGCGTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
||
| CDS-3UTR CAA 90 bp | CCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCACAAAAGTGAAAGTGACTaGAGGCTGCTGTCTGTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: PAVQAVVWLPWLRTELTHKSESD*RLLSVS Trigger: GCTAACAGACAGCAGCCTCAAGTCACTTTCACTTTT...GTGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
||
| CDS-3UTR CAA 90 bp | ACCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCAAAAACTTTTACGCAGTaGTCCGTCAGAGTGGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: TCSPGCCLAALAADRVDSKTFTQ*SVRVGM Trigger: CATGCCCACTCTGACGGACAACTGCGTAAAAGTTTT...TGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
||
| CDS TCA 90 bp | AGCCTTGGACTGAGATCTGGGTGCAGCCGGAAAGGTCCAGATAGATaGGCTTGTGGCATCCGTTCCCCAAGTTCAGGTACTGTAAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLGLRSGCSRKGPDR*ACGIRSPSSGTVSL Trigger: AAGGCTTACAGTACCTGAACTTGGGGAACGGATGCCACAAGCTCATCTATCTGGACCTTTCCGGCTGCACCCAGATCTCAGTCCAAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
||
| CDS-3UTR CAA 90 bp | ACCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCAACAGTCTTCGAACTCTaGACTTCAGTGATGGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: TCSPGCCLAALAADRVDSTVFEL*TSVMDG Trigger: TCCATCCATCACTGAAGTCAAGAGTTCGAAGACTGT...TGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
||
| CDS-3UTR CAA 90 bp | CCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCACAGAGACGTTCAACTCTaGCAAGTTTTTACAGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PAVQAVVWLPWLRTELTHRDVQL*QVFTVA Trigger: AGCCACTGTAAAAACTTGCAAGAGTTGAACGTCTCT...GTGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
||
| CDS TCA 90 bp | ACTTCTCAACCAAAACCTGGGTGCAGCCGGAAAGGTCCAGATAGATaGGCTTGTGGCATCCGTTCCCCAAGTTCAGGTACTGTAAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TSQPKPGCSRKGPDR*ACGIRSPSSGTVSL Trigger: AAGGCTTACAGTACCTGAACTTGGGGAACGGATGCCACAAGCTCATCTATCTGGACCTTTCCGGCTGCACCCAGGTTTTGGTTGAGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS CCA 90 bp | AATCTTGTCAAGAGGGTTGCCTTCAGAGTCGTAGCCAAACCAATGTaGAGGGTTGTCGGAGTTGTATTCCTGATGCTGGACCACAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NLVKRVAFRVVAKPM*RVVGVVFLMLDHRG Trigger: TCCTCTGTGGTCCAGCATCAGGAATACAACTCCGACAACCCTCCACATTGGTTTGGCTACGACTCTGAAGGCAACCCTCTTGACAAGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR CAA 90 bp | ACCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCATTTTGGCATCTAAAATaGTCATGTGCTATTGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TCSPGCCLAALAADRVDSFWHLK*SCAIAL Trigger: CAAGGCAATAGCACATGACAATTTTAGATGCCAAAA...TGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
||
| CDS-3UTR CAA 90 bp | ACCTGCAGTCCAGGCTGTTGTTTGGCTGCCCTGGCTGCGGACAGAGTTGACTCAACTGAAGTTCATGTTTaGAAATCAAGTCGTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TCSPGCCLAALAADRVDSTEVHV*KSSRLL Trigger: GAGAAGACGACTTGATTTCAAAACATGAACTTCAGT...TGAGTCAACTCTGTCCGCAGCCAGGGCAGCCAAACAACAGCCTGGACTGCAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
||
| CDS GCA 90 bp | TTGGATAGATTGAGATACAGGACCCCAGGACAGCCCTCAGAAATGTaGCTCATGGATTCATCTGTGAAAGACTGGCAGTCAGAGACGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LDRLRYRTPGQPSEM*LMDSSVKDWQSETF Trigger: GAACGTCTCTGACTGCCAGTCTTTCACAGATGAATCCATGAGGCACATTTCTGAGGGCTGTCCTGGGGTCCTGTATCTCAATCTATCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051358.11 ENSMUST00000115234.2 |
||
| CDS TCA 90 bp | ACTGGCAGTCAGAGACGTTCAACTCTTGCAAGTTTTTACAGTGGCTaGCAGCTTTCAAGGTTTTTGTTCGGAAGTCGCAGCCTCGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TGSQRRSTLASFYSG*QLSRFLFGSRSLGS Trigger: ACTTCCGAGGCTGCGACTTCCGAACAAAAACCTTGAAAGCTGTCAGCCACTGTAAAAACTTGCAAGAGTTGAACGTCTCTGACTGCCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000051358.11 ENSMUST00000115234.2 |
||
| CDS GCA 90 bp | GTAGGAGACGTCCAAGTGTTCCAACAACAGCGAGGTTTTGCAGTATaGCCGAATTCCAAAGTCAGTGATGTTGACACAGTCAGACACAGA | + |
|
Preference number: 5 (lower is better) Translates to: VGDVQVFQQQRGFAV*PNSKVSDVDTVRHR Trigger: TCTGTGTCTGACTGTGTCAACATCACTGACTTTGGAATTCGGGCATACTGCAAAACCTCGCTGTTGTTGGAACACTTGGACGTCTCCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS CCA 90 bp | AAAGACTGGCAGTCAGAGACGTTCAACTCTTGCAAGTTTTTACAGTaGCTGACAGCTTTCAAGGTTTTTGTTCGGAAGTCGCAGCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: KDWQSETFNSCKFLQ*LTAFKVFVRKSQPR Trigger: CCGAGGCTGCGACTTCCGAACAAAAACCTTGAAAGCTGTCAGCCACTGTAAAAACTTGCAAGAGTTGAACGTCTCTGACTGCCAGTCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000051358.11 ENSMUST00000115234.2 |
||
| CDS-3UTR CAA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCACAGCTTTCAAGGTTTTaGTTCGGAAGTCGCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ALLFDIVIENQQLTIFTSQLSRF*FGSRSL Trigger: GAGGCTGCGACTTCCGAACAAAAACCTTGAAAGCTG...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
||
| CDS-3UTR CAA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCAAGGTACTGTAAGCCTTaGTCGGTGAACTTTCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALLFDIVIENQQLTIFTSRYCKP*SVNFRQ Trigger: CTGCCGAAAGTTCACCGACAAAGGCTTACAGTACCT...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS-3UTR CAA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCAGATGGACTTGCAGAATaGCATCTTGAGGATCCGGAG | + |
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Preference number: 5 (lower is better) Translates to: ALLFDIVIENQQLTIFTSDGLAE*HLEDPE Trigger: CTCCGGATCCTCAAGATGCAATTCTGCAAGTCCATC...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS-3UTR CAA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCACTTGAGGATCCGGAGTaGTTTGCAGCCTATTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: ALLFDIVIENQQLTIFTSLEDPE*FAAYLK Trigger: CTTCAAATAGGCTGCAAACAACTCCGGATCCTCAAG...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS GCA 90 bp | CAAAGAAGGTTTTCCAGACCTCTTTTAATGATAGCTAGGATCATGTaGTCTAAATATTTCAGTGGGTCCTCAGGACATGTCACAAGTAAA | + |
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Preference number: 5 (lower is better) Translates to: QRRFSRPLLMIARIM*SKYFSGSSGHVTSK Trigger: TTTACTTGTGACATGTCCTGAGGACCCACTGAAATATTTAGAGCACATGATCCTAGCTATCATTAAAAGAGGTCTGGAAAACCTTCTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051358.11 ENSMUST00000115234.2 |
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| CDS-3UTR CAA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCAACAGTCTTCGAACTCTaGACTTCAGTGATGGATGGA | + |
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Preference number: 5 (lower is better) Translates to: ALLFDIVIENQQLTIFTSTVFEL*TSVMDG Trigger: TCCATCCATCACTGAAGTCAAGAGTTCGAAGACTGT...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS-3UTR CAA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCATCTCTTGTTTTACTCTaGTGTCTGGCTCTCTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: ALLFDIVIENQQLTIFTSSLVLL*CLALSF Trigger: GAAGGAGAGAGCCAGACACAAGAGTAAAACAAGAGA...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS-3UTR CAA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCAAAAAGTGAAAGTGACTaGAGGCTGCTGTCTGTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: ALLFDIVIENQQLTIFTSKSESD*RLLSVS Trigger: GCTAACAGACAGCAGCCTCAAGTCACTTTCACTTTT...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS-3UTR CAA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCACCAAAGTCAGTGATGTaGACACAGTCAGACACAGAA | + |
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Preference number: 5 (lower is better) Translates to: ALLFDIVIENQQLTIFTSPKSVM*TQSDTE Trigger: TTCTGTGTCTGACTGTGTCAACATCACTGACTTTGG...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS-3UTR CAA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCATTGCAGAATTGCATCTaGAGGATCCGGAGTTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: ALLFDIVIENQQLTIFTSLQNCI*RIRSCL Trigger: CAAACAACTCCGGATCCTCAAGATGCAATTCTGCAA...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS-3UTR CAA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCAAGAGACGTTCAACTCTaGCAAGTTTTTACAGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: ALLFDIVIENQQLTIFTSRDVQL*QVFTVA Trigger: AGCCACTGTAAAAACTTGCAAGAGTTGAACGTCTCT...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS-3UTR CAA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCATTGTTTGCAGCCTATTaGAAGGTCCTGAATGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: ALLFDIVIENQQLTIFTSLFAAY*KVLNDL Trigger: CAGATCATTCAGGACCTTCAAATAGGCTGCAAACAA...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS-3UTR CAA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCATTTTGGCATCTAAAATaGTCATGTGCTATTGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ALLFDIVIENQQLTIFTSFWHLK*SCAIAL Trigger: CAAGGCAATAGCACATGACAATTTTAGATGCCAAAA...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS-3UTR CAA 90 bp | GCACTGCTTTTTGACATTGTTATTGAGAACCAGCAACTCACAATATTTACATCAACTGAAGTTCATGTTTaGAAATCAAGTCGTCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: ALLFDIVIENQQLTIFTSTEVHV*KSSRLL Trigger: GAGAAGACGACTTGATTTCAAAACATGAACTTCAGT...TGATGTAAATATTGTGAGTTGCTGGTTCTCAATAACAATGTCAAAAAGCAGTGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS TCA 72 bp | GGTGCACAATCCCCGTGCAGCTGCTGGCGATGTTCCTaGAGCCTTGGACTGAGATCTGGGTGCAGCCGGAAA | + |
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Preference number: 6 (lower is better) Translates to: GAQSPCSCWRCS*SLGLRSGCSRK Trigger: TTTCCGGCTGCACCCAGATCTCAGTCCAAGGCTTCAGGAACATCGCCAGCAGCTGCACGGGGATTGTGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS CCA 72 bp | ATCCCCGTGCAGCTGCTGGCGATGTTCCTGAAGCCTTaGACTGAGATCTGGGTGCAGCCGGAAAGGTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: IPVQLLAMFLKP*TEIWVQPERSR Trigger: TCTGGACCTTTCCGGCTGCACCCAGATCTCAGTCCAAGGCTTCAGGAACATCGCCAGCAGCTGCACGGGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS GCA 72 bp | TTGTCCGTCAGAGTGGGCATGTCGTTGATAGTAAGGTaGACAATCCCCGTGCAGCTGCTGGCGATGTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSVRVGMSLIVR*TIPVQLLAMFL Trigger: CAGGAACATCGCCAGCAGCTGCACGGGGATTGTGCACCTTACTATCAACGACATGCCCACTCTGACGGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS TCA 72 bp | CCAAAACCTGGGTGCAGCCGGAAAGGTCCAGATAGATaGGCTTGTGGCATCCGTTCCCCAAGTTCAGGTACT | + |
|
Preference number: 6 (lower is better) Translates to: PKPGCSRKGPDR*ACGIRSPSSGT Trigger: AGTACCTGAACTTGGGGAACGGATGCCACAAGCTCATCTATCTGGACCTTTCCGGCTGCACCCAGGTTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS TCA 72 bp | CTGAGATCTGGGTGCAGCCGGAAAGGTCCAGATAGATaGGCTTGTGGCATCCGTTCCCCAAGTTCAGGTACT | + |
|
Preference number: 6 (lower is better) Translates to: LRSGCSRKGPDR*ACGIRSPSSGT Trigger: AGTACCTGAACTTGGGGAACGGATGCCACAAGCTCATCTATCTGGACCTTTCCGGCTGCACCCAGATCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS GCA 72 bp | CTGATGCTGGACCACAGAGGACATTTTCTGAGCCGCTaGCGGAGAGATGGACTTGCAGAATTGCATCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: LMLDHRGHFLSR*RRDGLAELHLE Trigger: CTCAAGATGCAATTCTGCAAGTCCATCTCTCCGGCAGCGGCTCAGAAAATGTCCTCTGTGGTCCAGCATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS CAA 72 bp | ACTTTTACGCAGTTGTCCGTCAGAGTGGGCATGTCGTaGATAGTAAGGTGCACAATCCCCGTGCAGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TFTQLSVRVGMS*IVRCTIPVQLL Trigger: CAGCAGCTGCACGGGGATTGTGCACCTTACTATCAACGACATGCCCACTCTGACGGACAACTGCGTAAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115234.2 |
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| CDS CAA 90 bp | GGTAGGAGTCGCATGGTCCTGTTGGTGATGGTTGTGTTGGATAGATaGAGATACAGGACCCCAGGACAGCCCTCAGAAATGTGCCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: GRSRMVLLVMVVLDR*RYRTPGQPSEMCLM Trigger: CATGAGGCACATTTCTGAGGGCTGTCCTGGGGTCCTGTATCTCAATCTATCCAACACAACCATCACCAACAGGACCATGCGACTCCTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051358.11 ENSMUST00000115234.2 |
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| CDS CAA 90 bp | AAGTACCTGGGTAGGAGTCGCATGGTCCTGTTGGTGATGGTTGTGTaGGATAGATTGAGATACAGGACCCCAGGACAGCCCTCAGAAATG | + |
|
Preference number: 6 (lower is better) Translates to: KYLGRSRMVLLVMVV*DRLRYRTPGQPSEM Trigger: CATTTCTGAGGGCTGTCCTGGGGTCCTGTATCTCAATCTATCCAACACAACCATCACCAACAGGACCATGCGACTCCTACCCAGGTACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051358.11 ENSMUST00000115234.2 |
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| CDS TCA 72 bp | CCGCTGCCGGAGAGATGGACTTGCAGAATTGCATCTTaGGGATCCGGAGTTGTTTGCAGCCTATTTGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PLPERWTCRIAS*GSGVVCSLFEG Trigger: ACCTTCAAATAGGCTGCAAACAACTCCGGATCCTCAAGATGCAATTCTGCAAGTCCATCTCTCCGGCAGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS CCA 72 bp | AAGAGGGTTGCCTTCAGAGTCGTAGCCAAACCAATGTaGAGGGTTGTCGGAGTTGTATTCCTGATGCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: KRVAFRVVAKPM*RVVGVVFLMLD Trigger: GTCCAGCATCAGGAATACAACTCCGACAACCCTCCACATTGGTTTGGCTACGACTCTGAAGGCAACCCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS GCA 72 bp | TTGAGATACAGGACCCCAGGACAGCCCTCAGAAATGTaGCTCATGGATTCATCTGTGAAAGACTGGCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: LRYRTPGQPSEM*LMDSSVKDWQS Trigger: TGACTGCCAGTCTTTCACAGATGAATCCATGAGGCACATTTCTGAGGGCTGTCCTGGGGTCCTGTATCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051358.11 ENSMUST00000115234.2 |
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| CDS CAA 90 bp | TTCTGTAAGTTGTGGAAGTACCTGGGTAGGAGTCGCATGGTCCTGTaGGTGATGGTTGTGTTGGATAGATTGAGATACAGGACCCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: FCKLWKYLGRSRMVL*VMVVLDRLRYRTPG Trigger: TCCTGGGGTCCTGTATCTCAATCTATCCAACACAACCATCACCAACAGGACCATGCGACTCCTACCCAGGTACTTCCACAACTTACAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051358.11 ENSMUST00000115234.2 |
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| CDS CAA 72 bp | TTGTGGAAGTACCTGGGTAGGAGTCGCATGGTCCTGTaGGTGATGGTTGTGTTGGATAGATTGAGATACAGG | + |
|
Preference number: 6 (lower is better) Translates to: LWKYLGRSRMVL*VMVVLDRLRYR Trigger: CCTGTATCTCAATCTATCCAACACAACCATCACCAACAGGACCATGCGACTCCTACCCAGGTACTTCCACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051358.11 ENSMUST00000115234.2 |
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| CDS CAA 90 bp | TGCCGGAGAGATGGACTTGCAGAATTGCATCTTGAGGATCCGGAGTaGTTTGCAGCCTATTTGAAGGTCCTGAATGATCTGGTCTGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: CRRDGLAELHLEDPE*FAAYLKVLNDLVCK Trigger: CTTACAGACCAGATCATTCAGGACCTTCAAATAGGCTGCAAACAACTCCGGATCCTCAAGATGCAATTCTGCAAGTCCATCTCTCCGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS CCA 72 bp | TCAGACAGTCTTCGAACTCTTGACTTCAGTGATGGATaGATGCACGTGTCCCAAAGAAGGTTTTCCAGACCT | + |
|
Preference number: 6 (lower is better) Translates to: SDSLRTLDFSDG*MHVSQRRFSRP Trigger: AGGTCTGGAAAACCTTCTTTGGGACACGTGCATCCATCCATCACTGAAGTCAAGAGTTCGAAGACTGTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051358.11 ENSMUST00000115234.2 |
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| CDS CAA 90 bp | AACAGCGAGGTTTTGCAGTATGCCCGAATTCCAAAGTCAGTGATGTaGACACAGTCAGACACAGAAACTTCCCTCAGTTTTCTGTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: NSEVLQYARIPKSVM*TQSDTETSLSFLCL Trigger: CAGACACAGAAAACTGAGGGAAGTTTCTGTGTCTGACTGTGTCAACATCACTGACTTTGGAATTCGGGCATACTGCAAAACCTCGCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS CAA 90 bp | TCGAGTACAGAAAATGGCTATAGTCTTTATGATGTCATCTGTCAGTaGGGAGCAGTAGGAGACGTCCAAGTGTTCCAACAACAGCGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SSTENGYSLYDVICQ*GAVGDVQVFQQQRG Trigger: ACCTCGCTGTTGTTGGAACACTTGGACGTCTCCTACTGCTCCCAACTGACAGATGACATCATAAAGACTATAGCCATTTTCTGTACTCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS CAA 90 bp | CTTGCAGAATTGCATCTTGAGGATCCGGAGTTGTTTGCAGCCTATTaGAAGGTCCTGAATGATCTGGTCTGTAAGTTGGATACAGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LAELHLEDPELFAAY*KVLNDLVCKLDTAR Trigger: TCTGGCTGTATCCAACTTACAGACCAGATCATTCAGGACCTTCAAATAGGCTGCAAACAACTCCGGATCCTCAAGATGCAATTCTGCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS TCA 72 bp | CAGAGACGTTCAACTCTTGCAAGTTTTTACAGTGGCTaGCAGCTTTCAAGGTTTTTGTTCGGAAGTCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QRRSTLASFYSG*QLSRFLFGSRS Trigger: GCTGCGACTTCCGAACAAAAACCTTGAAAGCTGTCAGCCACTGTAAAAACTTGCAAGAGTTGAACGTCTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000051358.11 ENSMUST00000115234.2 |
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| CDS CAA 72 bp | GATGGACTTGCAGAATTGCATCTTGAGGATCCGGAGTaGTTTGCAGCCTATTTGAAGGTCCTGAATGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: DGLAELHLEDPE*FAAYLKVLNDL Trigger: CAGATCATTCAGGACCTTCAAATAGGCTGCAAACAACTCCGGATCCTCAAGATGCAATTCTGCAAGTCCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS CCA 72 bp | CAGTCAGAGACGTTCAACTCTTGCAAGTTTTTACAGTaGCTGACAGCTTTCAAGGTTTTTGTTCGGAAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: QSETFNSCKFLQ*LTAFKVFVRKS Trigger: CGACTTCCGAACAAAAACCTTGAAAGCTGTCAGCCACTGTAAAAACTTGCAAGAGTTGAACGTCTCTGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000051358.11 ENSMUST00000115234.2 |
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| CDS CAA 72 bp | ATCTGTGAAAGACTGGCAGTCAGAGACGTTCAACTCTaGCAAGTTTTTACAGTGGCTGACAGCTTTCAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: ICERLAVRDVQL*QVFTVADSFQG Trigger: ACCTTGAAAGCTGTCAGCCACTGTAAAAACTTGCAAGAGTTGAACGTCTCTGACTGCCAGTCTTTCACAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051358.11 ENSMUST00000115234.2 |
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| CDS CAA 72 bp | TTGCATCTTGAGGATCCGGAGTTGTTTGCAGCCTATTaGAAGGTCCTGAATGATCTGGTCTGTAAGTTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LHLEDPELFAAY*KVLNDLVCKLD Trigger: ATCCAACTTACAGACCAGATCATTCAGGACCTTCAAATAGGCTGCAAACAACTCCGGATCCTCAAGATGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS CAA 90 bp | CATGGATTCATCTGTGAAAGACTGGCAGTCAGAGACGTTCAACTCTaGCAAGTTTTTACAGTGGCTGACAGCTTTCAAGGTTTTTGTTCG | + |
|
Preference number: 6 (lower is better) Translates to: HGFICERLAVRDVQL*QVFTVADSFQGFCS Trigger: CGAACAAAAACCTTGAAAGCTGTCAGCCACTGTAAAAACTTGCAAGAGTTGAACGTCTCTGACTGCCAGTCTTTCACAGATGAATCCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000051358.11 ENSMUST00000115234.2 |
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| CDS CAA 72 bp | GTTTTGCAGTATGCCCGAATTCCAAAGTCAGTGATGTaGACACAGTCAGACACAGAAACTTCCCTCAGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: VLQYARIPKSVM*TQSDTETSLSF Trigger: AAAACTGAGGGAAGTTTCTGTGTCTGACTGTGTCAACATCACTGACTTTGGAATTCGGGCATACTGCAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS CAA 72 bp | GAAAATGGCTATAGTCTTTATGATGTCATCTGTCAGTaGGGAGCAGTAGGAGACGTCCAAGTGTTCCAACAA | + |
|
Preference number: 6 (lower is better) Translates to: ENGYSLYDVICQ*GAVGDVQVFQQ Trigger: TTGTTGGAACACTTGGACGTCTCCTACTGCTCCCAACTGACAGATGACATCATAAAGACTATAGCCATTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS CAA 90 bp | TTGTTTGCAGCCTATTTGAAGGTCCTGAATGATCTGGTCTGTAAGTaGGATACAGCCAGAGATATCCAAAATGTGCAGATAATGGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: LFAAYLKVLNDLVCK*DTARDIQNVQIMAP Trigger: AGGTGCCATTATCTGCACATTTTGGATATCTCTGGCTGTATCCAACTTACAGACCAGATCATTCAGGACCTTCAAATAGGCTGCAAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS CAA 72 bp | GCCTATTTGAAGGTCCTGAATGATCTGGTCTGTAAGTaGGATACAGCCAGAGATATCCAAAATGTGCAGATA | + |
|
Preference number: 6 (lower is better) Translates to: AYLKVLNDLVCK*DTARDIQNVQI Trigger: TATCTGCACATTTTGGATATCTCTGGCTGTATCCAACTTACAGACCAGATCATTCAGGACCTTCAAATAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS TCA 72 bp | TGTGTCTGGAAAGTATGGTCATGCCCTCATTTGAGATaGGTGTTCCAGAAAGATCTACTGATATCAAGGATA | + |
|
Preference number: 6 (lower is better) Translates to: CVWKVWSCPHLR*VFQKDLLISRI Trigger: TATCCTTGATATCAGTAGATCTTTCTGGAACACTCATCTCAAATGAGGGCATGACCATACTTTCCAGACACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS TCA 72 bp | CTCGTCGATGCTGAATGGCTCTTTGACTATCAGTTTTaGGTAAGTTCTAAGTTGTACTCGACTATGAATCTT | + |
|
Preference number: 6 (lower is better) Translates to: LVDAEWLFDYQF*VSSKLYSTMNL Trigger: AAGATTCATAGTCGAGTACAACTTAGAACTTACTCAAAACTGATAGTCAAAGAGCCATTCAGCATCGACGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051358.11 |
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| CDS CAA 72 bp | ACTGAAGTTCATGTTTTGAAATCAAGTCGTCTTCTCTaGTTTTACTCTTGTGTCTGGCTCTCTCCTTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: TEVHVLKSSRLL*FYSCVWLSPSI Trigger: AATGGAAGGAGAGAGCCAGACACAAGAGTAAAACAAGAGAAGACGACTTGATTTCAAAACATGAACTTCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051358.11 ENSMUST00000115234.2 |
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