Pregenerated sensors for FBXL12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066892Ensembl transcript IDs: ENSMUST00000086458.10, ENSMUST00000086459.6, ENSMUST00000131128.2, ENSMUST00000131343.8, ENSMUST00000140702.3, ENSMUST00000148631.8, ENSMUST00000151861.9, ENSMUST00000155301.8
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAACTAGGACAATCCAACAGCATGCTCCCTTGCCCCTGCCCTCTATaGCTCTCAACCATGTATGTAGAAAACCAGGCCAACCTCGGAGCC | + |
|
Preference number: 1 (lower is better) Translates to: KLGQSNSMLPCPCPL*LSTMYVENQANLGA Trigger: GGCTCCGAGGTTGGCCTGGTTTTCTACATACATGGTTGAGAGGCATAGAGGGCAGGGGCAAGGGAGCATGCTGTTGGATTGTCCTAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| 3UTR GCA 90 bp | GAGAAGTCTTACACTGAGGATGCAAACTCCTGTGCCACCAGGCCGTaGCGAGACAGTGAGAACCCTGAATCTTCTTCTTTCTGTTTACAT | + |
|
Preference number: 1 (lower is better) Translates to: EKSYTEDANSCATRP*RDSENPESSSFCLH Trigger: ATGTAAACAGAAAGAAGAAGATTCAGGGTTCTCACTGTCTCGGCACGGCCTGGTGGCACAGGAGTTTGCATCCTCAGTGTAAGACTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155301.8 |
||
| 3UTR-3UTR CCA 90 bp | AACCAGGCCAACCTCGGAGCCCTGAACTCCACACACCTCCACTTGAAAATGAGCCTAAGGTCTCTGGGGTaGCTCAGCAGCACAGCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: NQANLGALNSTHLHLKMSLRSLG*LSSTAV Trigger: CACTGCTGTGCTGCTGAGCCACCCCAGAGACCTTAG...GCTCATTTTCAAGTGGAGGTGTGTGGAGTTCAGGGCTCCGAGGTTGGCCTGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| 3UTR-3UTR TCA 90 bp | CAGCATGCTCCCTTGCCCCTGCCCTCTATGCCTCTCAACCATGTATGTAGAAAACCAACCTCGGAGCCCTaGACTCCACACACCTCCACT | + |
|
Preference number: 2 (lower is better) Translates to: QHAPLPLPSMPLNHVCRKPTSEP*TPHTST Trigger: AGTGGAGGTGTGTGGAGTTCAGGGCTCCGAGGTTGG...TTTTCTACATACATGGTTGAGAGGCATAGAGGGCAGGGGCAAGGGAGCATGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| 3UTR-3UTR TCA 90 bp | GAACTCCACACACCTCCACTTGAAAATGAGCCCTCTCTAAGGTCTCTGGGGTGGCTAGCTTCCTTTCCTTaGCACCTCCAGTTCCCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: ELHTPPLENEPSLRSLGWLASFP*HLQFPH Trigger: GTGAGGGAACTGGAGGTGTCAAGGAAAGGAAGCTAG...CCACCCCAGAGACCTTAGAGAGGGCTCATTTTCAAGTGGAGGTGTGTGGAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| 3UTR-3UTR TCA 90 bp | GTAGAAAACCAGGCCAACCTCGGAGCCCTGAACTCCACACACCTCCACTTGAAACTAGCTTCCTTTCCTTaGCACCTCCAGTTCCCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: VENQANLGALNSTHLHLKLASFP*HLQFPH Trigger: GTGAGGGAACTGGAGGTGTCAAGGAAAGGAAGCTAG...TTTCAAGTGGAGGTGTGTGGAGTTCAGGGCTCCGAGGTTGGCCTGGTTTTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| 3UTR-3UTR TCA 90 bp | CCCTCTCTAAGGTCTCTGGGGTGGCTCAGCAGCACAGCAGTGCTTCTCTACCAGATGACAAGTCTGAGGTaGCCCAGATTACAGATAACC | + |
|
Preference number: 2 (lower is better) Translates to: PSLRSLGWLSSTAVLLYQMTSLR*PRLQIT Trigger: GGTTATCTGTAATCTGGGTCACCTCAGACTTGTCAT...CTGGTAGAGAAGCACTGCTGTGCTGCTGAGCCACCCCAGAGACCTTAGAGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| 3UTR-3UTR TCA 90 bp | ACAATCCAACAGCATGCTCCCTTGCCCCTGCCCTCTATGCCTCTCAACCATGTAATGACAAGTCTGAGGTaGCCCAGATTACAGATAACC | + |
|
Preference number: 2 (lower is better) Translates to: TIQQHAPLPLPSMPLNHVMTSLR*PRLQIT Trigger: GGTTATCTGTAATCTGGGTCACCTCAGACTTGTCAT...TACATGGTTGAGAGGCATAGAGGGCAGGGGCAAGGGAGCATGCTGTTGGATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| 3UTR-3UTR GCA 90 bp | CCCTCTCTAAGGTCTCTGGGGTGGCTCAGCAGCACAGCAGTGCTTCTCTACCAGCCTGATGAATTTACATaGTTCAGTTTGCTTATAAGG | + |
|
Preference number: 2 (lower is better) Translates to: PSLRSLGWLSSTAVLLYQPDEFT*FSLLIR Trigger: CCTTATAAGCAAACTGAAGCATGTAAATTCATCAGG...CTGGTAGAGAAGCACTGCTGTGCTGCTGAGCCACCCCAGAGACCTTAGAGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| 3UTR-3UTR GCA 90 bp | CCCCAGCTCAGGAAGCCCCAAGGTCCTAGCTTCCTTTCCTTGACACCTCCAGTTCCTGATGAATTTACATaGTTCAGTTTGCTTATAAGG | + |
|
Preference number: 2 (lower is better) Translates to: PQLRKPQGPSFLSLTPPVPDEFT*FSLLIR Trigger: CCTTATAAGCAAACTGAAGCATGTAAATTCATCAGG...AACTGGAGGTGTCAAGGAAAGGAAGCTAGGACCTTGGGGCTTCCTGAGCTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| 3UTR-3UTR TCA 90 bp | ATGAATCATGAGGTAGCTATGATGCCTATTCCTAAATGTGTGAACGGGGTCTTCCTAGCTTCCTTTCCTTaGCACCTCCAGTTCCCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: MNHEVAMMPIPKCVNGVFLASFP*HLQFPH Trigger: GTGAGGGAACTGGAGGTGTCAAGGAAAGGAAGCTAG...GAAGACCCCGTTCACACATTTAGGAATAGGCATCATAGCTACCTCATGATTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| 3UTR-3UTR GCA 90 bp | GTAGAAAACCAGGCCAACCTCGGAGCCCTGAACTCCACACACCTCCACTTGAAACCTGATGAATTTACATaGTTCAGTTTGCTTATAAGG | + |
|
Preference number: 2 (lower is better) Translates to: VENQANLGALNSTHLHLKPDEFT*FSLLIR Trigger: CCTTATAAGCAAACTGAAGCATGTAAATTCATCAGG...TTTCAAGTGGAGGTGTGTGGAGTTCAGGGCTCCGAGGTTGGCCTGGTTTTCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| 3UTR-3UTR GCA 90 bp | AAATGTGTGAACGGGGTCTTCCAGAGGCTTGATGACAAGTCTGAGGTGACCCAGCCTGATGAATTTACATaGTTCAGTTTGCTTATAAGG | + |
|
Preference number: 2 (lower is better) Translates to: KCVNGVFQRLDDKSEVTQPDEFT*FSLLIR Trigger: CCTTATAAGCAAACTGAAGCATGTAAATTCATCAGG...CTGGGTCACCTCAGACTTGTCATCAAGCCTCTGGAAGACCCCGTTCACACATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| 3UTR-3UTR GCA 90 bp | ATGAATCATGAGGTAGCTATGATGCCTATTCCTAAATGTGTGAACGGGGTCTTCCCTGATGAATTTACATaGTTCAGTTTGCTTATAAGG | + |
|
Preference number: 2 (lower is better) Translates to: MNHEVAMMPIPKCVNGVFPDEFT*FSLLIR Trigger: CCTTATAAGCAAACTGAAGCATGTAAATTCATCAGG...GAAGACCCCGTTCACACATTTAGGAATAGGCATCATAGCTACCTCATGATTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| 3UTR-3UTR CAA 90 bp | AACCAGGCCAACCTCGGAGCCCTGAACTCCACACACCTCCACTTGAAAATGAGCCCTAGCTTCCTTTCCTaGACACCTCCAGTTCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: NQANLGALNSTHLHLKMSPSFLS*TPPVPS Trigger: TGAGGGAACTGGAGGTGTCAAGGAAAGGAAGCTAGG...GCTCATTTTCAAGTGGAGGTGTGTGGAGTTCAGGGCTCCGAGGTTGGCCTGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| 3UTR-3UTR CAA 90 bp | CACACACCTCCACTTGAAAATGAGCCCTCTCTAAGGTCTCTGGGGTGGCTCAGCCCTAGCTTCCTTTCCTaGACACCTCCAGTTCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: HTPPLENEPSLRSLGWLSPSFLS*TPPVPS Trigger: TGAGGGAACTGGAGGTGTCAAGGAAAGGAAGCTAGG...GCTGAGCCACCCCAGAGACCTTAGAGAGGGCTCATTTTCAAGTGGAGGTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| 3UTR TCA 72 bp | ACGGGGTCTTCCAGAGGCTTGATGACAAGTCTGAGGTaGCCCAGATTACAGATAACCCCAGCTCAGGAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: TGSSRGLMTSLR*PRLQITPAQEA Trigger: GGCTTCCTGAGCTGGGGTTATCTGTAATCTGGGTCACCTCAGACTTGTCATCAAGCCTCTGGAAGACCCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| 3UTR-3UTR CAA 90 bp | GAACTCCACACACCTCCACTTGAAAATGAGCCCTCTCTAAGGTCTCTGGGGTGGCCTAGCTTCCTTTCCTaGACACCTCCAGTTCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: ELHTPPLENEPSLRSLGWPSFLS*TPPVPS Trigger: TGAGGGAACTGGAGGTGTCAAGGAAAGGAAGCTAGG...CCACCCCAGAGACCTTAGAGAGGGCTCATTTTCAAGTGGAGGTGTGTGGAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| 3UTR TCA 72 bp | AGCAGTGCTTCTCTACCAGACCTAAGGCCATGGGTTTaGGTCCCAGGTACTGGAAAAGAAAGAGGGGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SSASLPDLRPWV*VPGTGKERGEG Trigger: CCCTTCCCCTCTTTCTTTTCCAGTACCTGGGACTCAAACCCATGGCCTTAGGTCTGGTAGAGAAGCACTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| 3UTR GCA 72 bp | CAATCCAACAGCATGCTCCCTTGCCCCTGCCCTCTATaGCTCTCAACCATGTATGTAGAAAACCAGGCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: QSNSMLPCPCPL*LSTMYVENQAN Trigger: GTTGGCCTGGTTTTCTACATACATGGTTGAGAGGCATAGAGGGCAGGGGCAAGGGAGCATGCTGTTGGATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGCATGCTCCCTTGCCCCTGCCCTCTATGCCTCTCAACCATGTATGTAGAAAACCTAGCTTCCTTTCCTaGACACCTCCAGTTCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: QHAPLPLPSMPLNHVCRKPSFLS*TPPVPS Trigger: TGAGGGAACTGGAGGTGTCAAGGAAAGGAAGCTAGG...TTTTCTACATACATGGTTGAGAGGCATAGAGGGCAGGGGCAAGGGAGCATGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| 3UTR GCA 72 bp | TCTAGAAAACTAGGACAATCCAACAGCATGCTCCCTTaGCCCTGCCCTCTATGCCTCTCAACCATGTATGTA | + |
|
Preference number: 3 (lower is better) Translates to: SRKLGQSNSMLP*PCPLCLSTMYV Trigger: TACATACATGGTTGAGAGGCATAGAGGGCAGGGGCAAGGGAGCATGCTGTTGGATTGTCCTAGTTTTCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGAATCATGAGGTAGCTATGATGCCTATTCCTAAATGTGTGAACGGGGTCTTCCCTAGCTTCCTTTCCTaGACACCTCCAGTTCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: MNHEVAMMPIPKCVNGVFPSFLS*TPPVPS Trigger: TGAGGGAACTGGAGGTGTCAAGGAAAGGAAGCTAGG...GAAGACCCCGTTCACACATTTAGGAATAGGCATCATAGCTACCTCATGATTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR TCA 90 bp | AACCAGGCCAACCTCGGAGCCCTGAACTCCACACACCTCCACTTGAAAATGAGCGACCAGGCCCTGGGCTaGGAGGCCCCCAACGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NQANLGALNSTHLHLKMSDQALG*EAPNGQ Trigger: CTGACCGTTGGGGGCCTCTCAGCCCAGGGCCTGGTC...GCTCATTTTCAAGTGGAGGTGTGTGGAGTTCAGGGCTCCGAGGTTGGCCTGGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | CCCTCTCTAAGGTCTCTGGGGTGGCTCAGCAGCACAGCAGTGCTTCTCTACCAGAGGAAGACCAGGCCCTaGGCTGAGAGGCCCCCAACG | + |
|
Preference number: 4 (lower is better) Translates to: PSLRSLGWLSSTAVLLYQRKTRP*AERPPT Trigger: CGTTGGGGGCCTCTCAGCCCAGGGCCTGGTCTTCCT...CTGGTAGAGAAGCACTGCTGTGCTGCTGAGCCACCCCAGAGACCTTAGAGAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR TCA 90 bp | CCCCAGCTCAGGAAGCCCCAAGGTCCTAGCTTCCTTTCCTTGACACCTCCAGTTCAGCGTGCTGTCAGCTaGCAGGGTGCAGCCCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PQLRKPQGPSFLSLTPPVQRAVS*QGAAQH Trigger: GTGCTGGGCTGCACCCTGTCAGCTGACAGCACGCTG...AACTGGAGGTGTCAAGGAAAGGAAGCTAGGACCTTGGGGCTTCCTGAGCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR TCA 90 bp | GAACTCCACACACCTCCACTTGAAAATGAGCCCTCTCTAAGGTCTCTGGGGTGGGACCAGGCCCTGGGCTaGGAGGCCCCCAACGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ELHTPPLENEPSLRSLGWDQALG*EAPNGQ Trigger: CTGACCGTTGGGGGCCTCTCAGCCCAGGGCCTGGTC...CCACCCCAGAGACCTTAGAGAGGGCTCATTTTCAAGTGGAGGTGTGTGGAGTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR TCA 90 bp | ACAATCCAACAGCATGCTCCCTTGCCCCTGCCCTCTATGCCTCTCAACCATGTAGACCAGGCCCTGGGCTaGGAGGCCCCCAACGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TIQQHAPLPLPSMPLNHVDQALG*EAPNGQ Trigger: CTGACCGTTGGGGGCCTCTCAGCCCAGGGCCTGGTC...TACATGGTTGAGAGGCATAGAGGGCAGGGGCAAGGGAGCATGCTGTTGGATTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR TCA 90 bp | GTAGAAAACCAGGCCAACCTCGGAGCCCTGAACTCCACACACCTCCACTTGAAAGACCAGGCCCTGGGCTaGGAGGCCCCCAACGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VENQANLGALNSTHLHLKDQALG*EAPNGQ Trigger: CTGACCGTTGGGGGCCTCTCAGCCCAGGGCCTGGTC...TTTCAAGTGGAGGTGTGTGGAGTTCAGGGCTCCGAGGTTGGCCTGGTTTTCTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR TCA 90 bp | AACCAGGCCAACCTCGGAGCCCTGAACTCCACACACCTCCACTTGAAAATGAGCCAGCGTGCTGTCAGCTaGCAGGGTGCAGCCCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NQANLGALNSTHLHLKMSQRAVS*QGAAQH Trigger: GTGCTGGGCTGCACCCTGTCAGCTGACAGCACGCTG...GCTCATTTTCAAGTGGAGGTGTGTGGAGTTCAGGGCTCCGAGGTTGGCCTGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR GCA 90 bp | CCCTCTCTAAGGTCTCTGGGGTGGCTCAGCAGCACAGCAGTGCTTCTCTACCAGTCCCAGCCCAGCCCTTaGACCTCAAGCACTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSLRSLGWLSSTAVLLYQSQPSP*TSSTLS Trigger: GCTCAGAGTGCTTGAGGTGCAAGGGCTGGGCTGGGA...CTGGTAGAGAAGCACTGCTGTGCTGCTGAGCCACCCCAGAGACCTTAGAGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | CCCTCTCTAAGGTCTCTGGGGTGGCTCAGCAGCACAGCAGTGCTTCTCTACCAGGCAGAGGCAGCACCGTaGGGTCCTGCTCTTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSLRSLGWLSSTAVLLYQAEAAP*GPALSA Trigger: TGCAGAAAGAGCAGGACCCCACGGTGCTGCCTCTGC...CTGGTAGAGAAGCACTGCTGTGCTGCTGAGCCACCCCAGAGACCTTAGAGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR TCA 90 bp | CCCCAGCTCAGGAAGCCCCAAGGTCCTAGCTTCCTTTCCTTGACACCTCCAGTTGCAGGAGGTGCCACATaGCTTTCGGCCGCATCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PQLRKPQGPSFLSLTPPVAGGAT*LSAASC Trigger: ACACGATGCGGCCGAAAGTCATGTGGCACCTCCTGC...AACTGGAGGTGTCAAGGAAAGGAAGCTAGGACCTTGGGGCTTCCTGAGCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086459.6 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR GCA 90 bp | CCCCAGCTCAGGAAGCCCCAAGGTCCTAGCTTCCTTTCCTTGACACCTCCAGTTTGTCAGCTGACAGGGTaGAGCCCAGCACCTCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PQLRKPQGPSFLSLTPPVCQLTG*SPAPQA Trigger: GGCTTGAGGTGCTGGGCTGCACCCTGTCAGCTGACA...AACTGGAGGTGTCAAGGAAAGGAAGCTAGGACCTTGGGGCTTCCTGAGCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | CACACACCTCCACTTGAAAATGAGCCCTCTCTAAGGTCTCTGGGGTGGCTCAGCAGCGGTGACAGACCCTaGAGATGCGGATCCGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HTPPLENEPSLRSLGWLSSGDRP*RCGSGP Trigger: GGGACCGGATCCGCATCTCCAGGGTCTGTCACCGCT...GCTGAGCCACCCCAGAGACCTTAGAGAGGGCTCATTTTCAAGTGGAGGTGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086459.6 ENSMUST00000148631.8 |
||
| CDS-3UTR CCA 90 bp | AAACTAGGACAATCCAACAGCATGCTCCCTTGCCCCTGCCCTCTATGCCTCTCAAGGAAGACCAGGCCCTaGGCTGAGAGGCCCCCAACG | + |
|
Preference number: 4 (lower is better) Translates to: KLGQSNSMLPCPCPLCLSRKTRP*AERPPT Trigger: CGTTGGGGGCCTCTCAGCCCAGGGCCTGGTCTTCCT...TGAGAGGCATAGAGGGCAGGGGCAAGGGAGCATGCTGTTGGATTGTCCTAGTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | ACAATCCAACAGCATGCTCCCTTGCCCCTGCCCTCTATGCCTCTCAACCATGTAAGGAAGACCAGGCCCTaGGCTGAGAGGCCCCCAACG | + |
|
Preference number: 4 (lower is better) Translates to: TIQQHAPLPLPSMPLNHVRKTRP*AERPPT Trigger: CGTTGGGGGCCTCTCAGCCCAGGGCCTGGTCTTCCT...TACATGGTTGAGAGGCATAGAGGGCAGGGGCAAGGGAGCATGCTGTTGGATTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | GTAGAAAACCAGGCCAACCTCGGAGCCCTGAACTCCACACACCTCCACTTGAAAAGGAAGACCAGGCCCTaGGCTGAGAGGCCCCCAACG | + |
|
Preference number: 4 (lower is better) Translates to: VENQANLGALNSTHLHLKRKTRP*AERPPT Trigger: CGTTGGGGGCCTCTCAGCCCAGGGCCTGGTCTTCCT...TTTCAAGTGGAGGTGTGTGGAGTTCAGGGCTCCGAGGTTGGCCTGGTTTTCTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR TCA 90 bp | CACACACCTCCACTTGAAAATGAGCCCTCTCTAAGGTCTCTGGGGTGGCTCAGCGCAGGAGGTGCCACATaGCTTTCGGCCGCATCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HTPPLENEPSLRSLGWLSAGGAT*LSAASC Trigger: ACACGATGCGGCCGAAAGTCATGTGGCACCTCCTGC...GCTGAGCCACCCCAGAGACCTTAGAGAGGGCTCATTTTCAAGTGGAGGTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086459.6 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR TCA 90 bp | CAGCATGCTCCCTTGCCCCTGCCCTCTATGCCTCTCAACCATGTATGTAGAAAACTCGAAGGTGGCGGCTaGTGGCCAGCAGCGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QHAPLPLPSMPLNHVCRKLEGGG*WPAACC Trigger: ACAGCACGCTGCTGGCCATCAGCCGCCACCTTCGAG...TTTTCTACATACATGGTTGAGAGGCATAGAGGGCAGGGGCAAGGGAGCATGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR TCA 90 bp | AGCTTCCTTTCCTTGACACCTCCAGTTCCCTCACGCCTGATGAATTTACATGCTGACCAGGCCCTGGGCTaGGAGGCCCCCAACGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFLSLTPPVPSRLMNLHADQALG*EAPNGQ Trigger: CTGACCGTTGGGGGCCTCTCAGCCCAGGGCCTGGTC...AGCATGTAAATTCATCAGGCGTGAGGGAACTGGAGGTGTCAAGGAAAGGAAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR GCA 90 bp | ACAACCCTGAGAAGTCTTACACTGAGGATGCAAACTCCTGTGCCACCAGGCCGTGACAGACCCTGGAGATaGGGATCCGGTCCCGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: TTLRSLTLRMQTPVPPGRDRPWR*GSGPGQ Trigger: CTGTCCGGGACCGGATCCGCATCTCCAGGGTCTGTC...ACGGCCTGGTGGCACAGGAGTTTGCATCCTCAGTGTAAGACTTCTCAGGGTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155301.8 |
||
| CDS-3UTR GCA 90 bp | CCCCAGCTCAGGAAGCCCCAAGGTCCTAGCTTCCTTTCCTTGACACCTCCAGTTCTCGGTCCAGCACGATaGATTCCAGCAGAGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PQLRKPQGPSFLSLTPPVLGPAR*IPAEAA Trigger: TGCTGCCTCTGCTGGAATGCATCGTGCTGGACCGAG...AACTGGAGGTGTCAAGGAAAGGAAGCTAGGACCTTGGGGCTTCCTGAGCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR GCA 90 bp | CACACACCTCCACTTGAAAATGAGCCCTCTCTAAGGTCTCTGGGGTGGCTCAGCTGTCAGCTGACAGGGTaGAGCCCAGCACCTCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HTPPLENEPSLRSLGWLSCQLTG*SPAPQA Trigger: GGCTTGAGGTGCTGGGCTGCACCCTGTCAGCTGACA...GCTGAGCCACCCCAGAGACCTTAGAGAGGGCTCATTTTCAAGTGGAGGTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR GCA 90 bp | CACACACCTCCACTTGAAAATGAGCCCTCTCTAAGGTCTCTGGGGTGGCTCAGCTCCCAGCCCAGCCCTTaGACCTCAAGCACTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HTPPLENEPSLRSLGWLSSQPSP*TSSTLS Trigger: GCTCAGAGTGCTTGAGGTGCAAGGGCTGGGCTGGGA...GCTGAGCCACCCCAGAGACCTTAGAGAGGGCTCATTTTCAAGTGGAGGTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | GTAGAAAACCAGGCCAACCTCGGAGCCCTGAACTCCACACACCTCCACTTGAAAAGCGGTGACAGACCCTaGAGATGCGGATCCGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VENQANLGALNSTHLHLKSGDRP*RCGSGP Trigger: GGGACCGGATCCGCATCTCCAGGGTCTGTCACCGCT...TTTCAAGTGGAGGTGTGTGGAGTTCAGGGCTCCGAGGTTGGCCTGGTTTTCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086459.6 ENSMUST00000148631.8 |
||
| CDS-3UTR CCA 90 bp | AAATGTGTGAACGGGGTCTTCCAGAGGCTTGATGACAAGTCTGAGGTGACCCAGAGGAAGACCAGGCCCTaGGCTGAGAGGCCCCCAACG | + |
|
Preference number: 4 (lower is better) Translates to: KCVNGVFQRLDDKSEVTQRKTRP*AERPPT Trigger: CGTTGGGGGCCTCTCAGCCCAGGGCCTGGTCTTCCT...CTGGGTCACCTCAGACTTGTCATCAAGCCTCTGGAAGACCCCGTTCACACATTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | CACACACCTCCACTTGAAAATGAGCCCTCTCTAAGGTCTCTGGGGTGGCTCAGCGGGTGTGGGCATGTCTaGGGTGATAAGGGGACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HTPPLENEPSLRSLGWLSGCGHV*GDKGTL Trigger: CAGGGTCCCCTTATCACCCCAGACATGCCCACACCC...GCTGAGCCACCCCAGAGACCTTAGAGAGGGCTCATTTTCAAGTGGAGGTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | CCCTCTCTAAGGTCTCTGGGGTGGCTCAGCAGCACAGCAGTGCTTCTCTACCAGAGGACACAATCTGAGTaGGTGTGGGCATGTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSLRSLGWLSSTAVLLYQRTQSE*VWACLG Trigger: CCCCAGACATGCCCACACCCACTCAGATTGTGTCCT...CTGGTAGAGAAGCACTGCTGTGCTGCTGAGCCACCCCAGAGACCTTAGAGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR TCA 90 bp | AAACTAGGACAATCCAACAGCATGCTCCCTTGCCCCTGCCCTCTATGCCTCTCAGCAGGAGGTGCCACATaGCTTTCGGCCGCATCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLGQSNSMLPCPCPLCLSAGGAT*LSAASC Trigger: ACACGATGCGGCCGAAAGTCATGTGGCACCTCCTGC...TGAGAGGCATAGAGGGCAGGGGCAAGGGAGCATGCTGTTGGATTGTCCTAGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086459.6 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR TCA 90 bp | CCCCAGCTCAGGAAGCCCCAAGGTCCTAGCTTCCTTTCCTTGACACCTCCAGTTCAGGAGGACACAATCTaGGTGGGTGTGGGCATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PQLRKPQGPSFLSLTPPVQEDTI*VGVGMS Trigger: AGACATGCCCACACCCACTCAGATTGTGTCCTCCTG...AACTGGAGGTGTCAAGGAAAGGAAGCTAGGACCTTGGGGCTTCCTGAGCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR GCA 90 bp | GTAGAAAACCAGGCCAACCTCGGAGCCCTGAACTCCACACACCTCCACTTGAAATGTCAGCTGACAGGGTaGAGCCCAGCACCTCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VENQANLGALNSTHLHLKCQLTG*SPAPQA Trigger: GGCTTGAGGTGCTGGGCTGCACCCTGTCAGCTGACA...TTTCAAGTGGAGGTGTGTGGAGTTCAGGGCTCCGAGGTTGGCCTGGTTTTCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR GCA 90 bp | GAACTCCACACACCTCCACTTGAAAATGAGCCCTCTCTAAGGTCTCTGGGGTGGTGTCAGCTGACAGGGTaGAGCCCAGCACCTCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ELHTPPLENEPSLRSLGWCQLTG*SPAPQA Trigger: GGCTTGAGGTGCTGGGCTGCACCCTGTCAGCTGACA...CCACCCCAGAGACCTTAGAGAGGGCTCATTTTCAAGTGGAGGTGTGTGGAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR GCA 90 bp | GAACTCCACACACCTCCACTTGAAAATGAGCCCTCTCTAAGGTCTCTGGGGTGGTCCCAGCCCAGCCCTTaGACCTCAAGCACTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ELHTPPLENEPSLRSLGWSQPSP*TSSTLS Trigger: GCTCAGAGTGCTTGAGGTGCAAGGGCTGGGCTGGGA...CCACCCCAGAGACCTTAGAGAGGGCTCATTTTCAAGTGGAGGTGTGTGGAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | AAACTAGGACAATCCAACAGCATGCTCCCTTGCCCCTGCCCTCTATGCCTCTCAGCAGAGGCAGCACCGTaGGGTCCTGCTCTTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KLGQSNSMLPCPCPLCLSAEAAP*GPALSA Trigger: TGCAGAAAGAGCAGGACCCCACGGTGCTGCCTCTGC...TGAGAGGCATAGAGGGCAGGGGCAAGGGAGCATGCTGTTGGATTGTCCTAGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | GAACTCCACACACCTCCACTTGAAAATGAGCCCTCTCTAAGGTCTCTGGGGTGGGCAGAGGCAGCACCGTaGGGTCCTGCTCTTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ELHTPPLENEPSLRSLGWAEAAP*GPALSA Trigger: TGCAGAAAGAGCAGGACCCCACGGTGCTGCCTCTGC...CCACCCCAGAGACCTTAGAGAGGGCTCATTTTCAAGTGGAGGTGTGTGGAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | ACAATCCAACAGCATGCTCCCTTGCCCCTGCCCTCTATGCCTCTCAACCATGTAGGGTGTGGGCATGTCTaGGGTGATAAGGGGACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TIQQHAPLPLPSMPLNHVGCGHV*GDKGTL Trigger: CAGGGTCCCCTTATCACCCCAGACATGCCCACACCC...TACATGGTTGAGAGGCATAGAGGGCAGGGGCAAGGGAGCATGCTGTTGGATTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | GAACTCCACACACCTCCACTTGAAAATGAGCCCTCTCTAAGGTCTCTGGGGTGGGGGTGTGGGCATGTCTaGGGTGATAAGGGGACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELHTPPLENEPSLRSLGWGCGHV*GDKGTL Trigger: CAGGGTCCCCTTATCACCCCAGACATGCCCACACCC...CCACCCCAGAGACCTTAGAGAGGGCTCATTTTCAAGTGGAGGTGTGTGGAGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR TCA 90 bp | AGCTTCCTTTCCTTGACACCTCCAGTTCCCTCACGCCTGATGAATTTACATGCTCTCGAAGGTGGCGGCTaGTGGCCAGCAGCGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SFLSLTPPVPSRLMNLHALEGGG*WPAACC Trigger: ACAGCACGCTGCTGGCCATCAGCCGCCACCTTCGAG...AGCATGTAAATTCATCAGGCGTGAGGGAACTGGAGGTGTCAAGGAAAGGAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR TCA 90 bp | CTTCCTTTCCTTGACACCTCCAGTTCCCTCACGCCTGATGAATTTACATGCTTCCTCGAAGGTGGCGGCTaGTGGCCAGCAGCGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPFLDTSSSLTPDEFTCFLEGGG*WPAACC Trigger: ACAGCACGCTGCTGGCCATCAGCCGCCACCTTCGAG...GAAGCATGTAAATTCATCAGGCGTGAGGGAACTGGAGGTGTCAAGGAAAGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR TCA 90 bp | AACCAGGCCAACCTCGGAGCCCTGAACTCCACACACCTCCACTTGAAAATGAGCCAGGAGGACACAATCTaGGTGGGTGTGGGCATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NQANLGALNSTHLHLKMSQEDTI*VGVGMS Trigger: AGACATGCCCACACCCACTCAGATTGTGTCCTCCTG...GCTCATTTTCAAGTGGAGGTGTGTGGAGTTCAGGGCTCCGAGGTTGGCCTGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR GCA 90 bp | CAGCATGCTCCCTTGCCCCTGCCCTCTATGCCTCTCAACCATGTATGTAGAAAATGTCAGCTGACAGGGTaGAGCCCAGCACCTCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QHAPLPLPSMPLNHVCRKCQLTG*SPAPQA Trigger: GGCTTGAGGTGCTGGGCTGCACCCTGTCAGCTGACA...TTTTCTACATACATGGTTGAGAGGCATAGAGGGCAGGGGCAAGGGAGCATGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | GCCTGTTTCACAACCCTGAGAAGTCTTACACTGAGGATGCAAACTCCTGTGCCAAGCGGTGACAGACCCTaGAGATGCGGATCCGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ACFTTLRSLTLRMQTPVPSGDRP*RCGSGP Trigger: GGGACCGGATCCGCATCTCCAGGGTCTGTCACCGCT...TGGCACAGGAGTTTGCATCCTCAGTGTAAGACTTCTCAGGGTTGTGAAACAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155301.8 |
||
| CDS-3UTR CCA 90 bp | CAGCATGCTCCCTTGCCCCTGCCCTCTATGCCTCTCAACCATGTATGTAGAAAAGCAGAGGCAGCACCGTaGGGTCCTGCTCTTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QHAPLPLPSMPLNHVCRKAEAAP*GPALSA Trigger: TGCAGAAAGAGCAGGACCCCACGGTGCTGCCTCTGC...TTTTCTACATACATGGTTGAGAGGCATAGAGGGCAGGGGCAAGGGAGCATGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | AAATGTGTGAACGGGGTCTTCCAGAGGCTTGATGACAAGTCTGAGGTGACCCAGGCAGAGGCAGCACCGTaGGGTCCTGCTCTTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KCVNGVFQRLDDKSEVTQAEAAP*GPALSA Trigger: TGCAGAAAGAGCAGGACCCCACGGTGCTGCCTCTGC...CTGGGTCACCTCAGACTTGTCATCAAGCCTCTGGAAGACCCCGTTCACACATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR TCA 90 bp | ATTTACATGCTTCAGTTTGCTTATAAGGTCACTCTCCAAGCTAGGCTAGGTTCCGACCAGGCCCTGGGCTaGGAGGCCCCCAACGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IYMLQFAYKVTLQARLGSDQALG*EAPNGQ Trigger: CTGACCGTTGGGGGCCTCTCAGCCCAGGGCCTGGTC...GGAACCTAGCCTAGCTTGGAGAGTGACCTTATAAGCAAACTGAAGCATGTAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR TCA 90 bp | GTAGAAAACCAGGCCAACCTCGGAGCCCTGAACTCCACACACCTCCACTTGAAACAGGAGGACACAATCTaGGTGGGTGTGGGCATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VENQANLGALNSTHLHLKQEDTI*VGVGMS Trigger: AGACATGCCCACACCCACTCAGATTGTGTCCTCCTG...TTTCAAGTGGAGGTGTGTGGAGTTCAGGGCTCCGAGGTTGGCCTGGTTTTCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR GCA 90 bp | CAGCATGCTCCCTTGCCCCTGCCCTCTATGCCTCTCAACCATGTATGTAGAAAACTCGGTCCAGCACGATaGATTCCAGCAGAGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QHAPLPLPSMPLNHVCRKLGPAR*IPAEAA Trigger: TGCTGCCTCTGCTGGAATGCATCGTGCTGGACCGAG...TTTTCTACATACATGGTTGAGAGGCATAGAGGGCAGGGGCAAGGGAGCATGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR GCA 90 bp | CACACACCTCCACTTGAAAATGAGCCCTCTCTAAGGTCTCTGGGGTGGCTCAGCAGTGGGGCAGGCCCTTaGACAGGATTTTCTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HTPPLENEPSLRSLGWLSSGAGP*TGFSLL Trigger: AAGCAGAGAAAATCCTGTGCAAGGGCCTGCCCCACT...GCTGAGCCACCCCAGAGACCTTAGAGAGGGCTCATTTTCAAGTGGAGGTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | GTAGAAAACCAGGCCAACCTCGGAGCCCTGAACTCCACACACCTCCACTTGAAAACAGGCGCTTCAGATTaGGGCATTTCTGACCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VENQANLGALNSTHLHLKTGASD*GISDPG Trigger: CCCTGGGTCAGAAATGCCCCAATCTGAAGCGCCTGT...TTTCAAGTGGAGGTGTGTGGAGTTCAGGGCTCCGAGGTTGGCCTGGTTTTCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | AAACTAGGACAATCCAACAGCATGCTCCCTTGCCCCTGCCCTCTATGCCTCTCAACAGGCGCTTCAGATTaGGGCATTTCTGACCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KLGQSNSMLPCPCPLCLSTGASD*GISDPG Trigger: CCCTGGGTCAGAAATGCCCCAATCTGAAGCGCCTGT...TGAGAGGCATAGAGGGCAGGGGCAAGGGAGCATGCTGTTGGATTGTCCTAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | AACCAGGCCAACCTCGGAGCCCTGAACTCCACACACCTCCACTTGAAAATGAGCGTGATAAGGGGACCCTaGAAGCACAAACTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NQANLGALNSTHLHLKMSVIRGP*KHKLSR Trigger: CCTGGAGAGTTTGTGCTTCCAGGGTCCCCTTATCAC...GCTCATTTTCAAGTGGAGGTGTGTGGAGTTCAGGGCTCCGAGGTTGGCCTGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | GTAGAAAACCAGGCCAACCTCGGAGCCCTGAACTCCACACACCTCCACTTGAAAAGGACACAATCTGAGTaGGTGTGGGCATGTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VENQANLGALNSTHLHLKRTQSE*VWACLG Trigger: CCCCAGACATGCCCACACCCACTCAGATTGTGTCCT...TTTCAAGTGGAGGTGTGTGGAGTTCAGGGCTCCGAGGTTGGCCTGGTTTTCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR GCA 90 bp | AAACTAGGACAATCCAACAGCATGCTCCCTTGCCCCTGCCCTCTATGCCTCTCAAGTGGGGCAGGCCCTTaGACAGGATTTTCTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KLGQSNSMLPCPCPLCLSSGAGP*TGFSLL Trigger: AAGCAGAGAAAATCCTGTGCAAGGGCCTGCCCCACT...TGAGAGGCATAGAGGGCAGGGGCAAGGGAGCATGCTGTTGGATTGTCCTAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR GCA 90 bp | GTAGAAAACCAGGCCAACCTCGGAGCCCTGAACTCCACACACCTCCACTTGAAAAGTGGGGCAGGCCCTTaGACAGGATTTTCTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VENQANLGALNSTHLHLKSGAGP*TGFSLL Trigger: AAGCAGAGAAAATCCTGTGCAAGGGCCTGCCCCACT...TTTCAAGTGGAGGTGTGTGGAGTTCAGGGCTCCGAGGTTGGCCTGGTTTTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | AGCTTCCTTTCCTTGACACCTCCAGTTCCCTCACGCCTGATGAATTTACATGCTGCAGAGGCAGCACCGTaGGGTCCTGCTCTTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SFLSLTPPVPSRLMNLHAAEAAP*GPALSA Trigger: TGCAGAAAGAGCAGGACCCCACGGTGCTGCCTCTGC...AGCATGTAAATTCATCAGGCGTGAGGGAACTGGAGGTGTCAAGGAAAGGAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | ACAATCCAACAGCATGCTCCCTTGCCCCTGCCCTCTATGCCTCTCAACCATGTAGTGATAAGGGGACCCTaGAAGCACAAACTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TIQQHAPLPLPSMPLNHVVIRGP*KHKLSR Trigger: CCTGGAGAGTTTGTGCTTCCAGGGTCCCCTTATCAC...TACATGGTTGAGAGGCATAGAGGGCAGGGGCAAGGGAGCATGCTGTTGGATTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | GAACTCCACACACCTCCACTTGAAAATGAGCCCTCTCTAAGGTCTCTGGGGTGGGTGATAAGGGGACCCTaGAAGCACAAACTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ELHTPPLENEPSLRSLGWVIRGP*KHKLSR Trigger: CCTGGAGAGTTTGTGCTTCCAGGGTCCCCTTATCAC...CCACCCCAGAGACCTTAGAGAGGGCTCATTTTCAAGTGGAGGTGTGTGGAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | CCCCAGCTCAGGAAGCCCCAAGGTCCTAGCTTCCTTTCCTTGACACCTCCAGTTACATCCACCAATCCATaGATTCTTTGGGACAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PQLRKPQGPSFLSLTPPVTSTNP*ILWDKP Trigger: GGGCTTGTCCCAAAGAATCCATGGATTGGTGGATGT...AACTGGAGGTGTCAAGGAAAGGAAGCTAGGACCTTGGGGCTTCCTGAGCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| 3UTR CAA 72 bp | CAGCAGTGCTTCTCTACCAGACCTAAGGCCATGGGTTaGAGTCCCAGGTACTGGAAAAGAAAGAGGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QQCFSTRPKAMG*SPRYWKRKRGR Trigger: CCTTCCCCTCTTTCTTTTCCAGTACCTGGGACTCAAACCCATGGCCTTAGGTCTGGTAGAGAAGCACTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR TCA 90 bp | ATGAATCATGAGGTAGCTATGATGCCTATTCCTAAATGTGTGAACGGGGTCTTCCTCGAAGGTGGCGGCTaGTGGCCAGCAGCGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MNHEVAMMPIPKCVNGVFLEGGG*WPAACC Trigger: ACAGCACGCTGCTGGCCATCAGCCGCCACCTTCGAG...GAAGACCCCGTTCACACATTTAGGAATAGGCATCATAGCTACCTCATGATTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR GCA 90 bp | AACCAGGCCAACCTCGGAGCCCTGAACTCCACACACCTCCACTTGAAAATGAGCGGGTCCTGCTCTTTCTaGAACCAGATCATGGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: NQANLGALNSTHLHLKMSGSCSF*NQIMEI Trigger: AATCTCCATGATCTGGTTGCAGAAAGAGCAGGACCC...GCTCATTTTCAAGTGGAGGTGTGTGGAGTTCAGGGCTCCGAGGTTGGCCTGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR GCA 90 bp | AAATGTGTGAACGGGGTCTTCCAGAGGCTTGATGACAAGTCTGAGGTGACCCAGAGTGGGGCAGGCCCTTaGACAGGATTTTCTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KCVNGVFQRLDDKSEVTQSGAGP*TGFSLL Trigger: AAGCAGAGAAAATCCTGTGCAAGGGCCTGCCCCACT...CTGGGTCACCTCAGACTTGTCATCAAGCCTCTGGAAGACCCCGTTCACACATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR GCA 90 bp | CAGCATGCTCCCTTGCCCCTGCCCTCTATGCCTCTCAACCATGTATGTAGAAAAAGTGGGGCAGGCCCTTaGACAGGATTTTCTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QHAPLPLPSMPLNHVCRKSGAGP*TGFSLL Trigger: AAGCAGAGAAAATCCTGTGCAAGGGCCTGCCCCACT...TTTTCTACATACATGGTTGAGAGGCATAGAGGGCAGGGGCAAGGGAGCATGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | ATGAATCATGAGGTAGCTATGATGCCTATTCCTAAATGTGTGAACGGGGTCTTCAGGAAGACCAGGCCCTaGGCTGAGAGGCCCCCAACG | + |
|
Preference number: 4 (lower is better) Translates to: MNHEVAMMPIPKCVNGVFRKTRP*AERPPT Trigger: CGTTGGGGGCCTCTCAGCCCAGGGCCTGGTCTTCCT...GAAGACCCCGTTCACACATTTAGGAATAGGCATCATAGCTACCTCATGATTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | AAATGTGTGAACGGGGTCTTCCAGAGGCTTGATGACAAGTCTGAGGTGACCCAGGTGATAAGGGGACCCTaGAAGCACAAACTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KCVNGVFQRLDDKSEVTQVIRGP*KHKLSR Trigger: CCTGGAGAGTTTGTGCTTCCAGGGTCCCCTTATCAC...CTGGGTCACCTCAGACTTGTCATCAAGCCTCTGGAAGACCCCGTTCACACATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR TCA 90 bp | CTTCCTTTCCTTGACACCTCCAGTTCCCTCACGCCTGATGAATTTACATGCTTCCAGGAGGACACAATCTaGGTGGGTGTGGGCATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPFLDTSSSLTPDEFTCFQEDTI*VGVGMS Trigger: AGACATGCCCACACCCACTCAGATTGTGTCCTCCTG...GAAGCATGTAAATTCATCAGGCGTGAGGGAACTGGAGGTGTCAAGGAAAGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR GCA 90 bp | ATTTACATGCTTCAGTTTGCTTATAAGGTCACTCTCCAAGCTAGGCTAGGTTCCGACAGACCCTGGAGATaGGGATCCGGTCCCGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: IYMLQFAYKVTLQARLGSDRPWR*GSGPGQ Trigger: CTGTCCGGGACCGGATCCGCATCTCCAGGGTCTGTC...GGAACCTAGCCTAGCTTGGAGAGTGACCTTATAAGCAAACTGAAGCATGTAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086459.6 ENSMUST00000148631.8 |
||
| CDS-3UTR GCA 90 bp | GTAGAAAACCAGGCCAACCTCGGAGCCCTGAACTCCACACACCTCCACTTGAAAGGGTCCTGCTCTTTCTaGAACCAGATCATGGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: VENQANLGALNSTHLHLKGSCSF*NQIMEI Trigger: AATCTCCATGATCTGGTTGCAGAAAGAGCAGGACCC...TTTCAAGTGGAGGTGTGTGGAGTTCAGGGCTCCGAGGTTGGCCTGGTTTTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | CTTCCTTTCCTTGACACCTCCAGTTCCCTCACGCCTGATGAATTTACATGCTTCAGGACACAATCTGAGTaGGTGTGGGCATGTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPFLDTSSSLTPDEFTCFRTQSE*VWACLG Trigger: CCCCAGACATGCCCACACCCACTCAGATTGTGTCCT...GAAGCATGTAAATTCATCAGGCGTGAGGGAACTGGAGGTGTCAAGGAAAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | AGCTTCCTTTCCTTGACACCTCCAGTTCCCTCACGCCTGATGAATTTACATGCTAGGACACAATCTGAGTaGGTGTGGGCATGTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SFLSLTPPVPSRLMNLHARTQSE*VWACLG Trigger: CCCCAGACATGCCCACACCCACTCAGATTGTGTCCT...AGCATGTAAATTCATCAGGCGTGAGGGAACTGGAGGTGTCAAGGAAAGGAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | GTAGAAAACCAGGCCAACCTCGGAGCCCTGAACTCCACACACCTCCACTTGAAAACATCCACCAATCCATaGATTCTTTGGGACAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VENQANLGALNSTHLHLKTSTNP*ILWDKP Trigger: GGGCTTGTCCCAAAGAATCCATGGATTGGTGGATGT...TTTCAAGTGGAGGTGTGTGGAGTTCAGGGCTCCGAGGTTGGCCTGGTTTTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR GCA 90 bp | AAATGTGTGAACGGGGTCTTCCAGAGGCTTGATGACAAGTCTGAGGTGACCCAGGGGTCCTGCTCTTTCTaGAACCAGATCATGGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: KCVNGVFQRLDDKSEVTQGSCSF*NQIMEI Trigger: AATCTCCATGATCTGGTTGCAGAAAGAGCAGGACCC...CTGGGTCACCTCAGACTTGTCATCAAGCCTCTGGAAGACCCCGTTCACACATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | CTTCCTTTCCTTGACACCTCCAGTTCCCTCACGCCTGATGAATTTACATGCTTCGTGATAAGGGGACCCTaGAAGCACAAACTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPFLDTSSSLTPDEFTCFVIRGP*KHKLSR Trigger: CCTGGAGAGTTTGTGCTTCCAGGGTCCCCTTATCAC...GAAGCATGTAAATTCATCAGGCGTGAGGGAACTGGAGGTGTCAAGGAAAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | ATGAATCATGAGGTAGCTATGATGCCTATTCCTAAATGTGTGAACGGGGTCTTCGGGTGTGGGCATGTCTaGGGTGATAAGGGGACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MNHEVAMMPIPKCVNGVFGCGHV*GDKGTL Trigger: CAGGGTCCCCTTATCACCCCAGACATGCCCACACCC...GAAGACCCCGTTCACACATTTAGGAATAGGCATCATAGCTACCTCATGATTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR GCA 90 bp | ATGAATCATGAGGTAGCTATGATGCCTATTCCTAAATGTGTGAACGGGGTCTTCCTCGGTCCAGCACGATaGATTCCAGCAGAGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MNHEVAMMPIPKCVNGVFLGPAR*IPAEAA Trigger: TGCTGCCTCTGCTGGAATGCATCGTGCTGGACCGAG...GAAGACCCCGTTCACACATTTAGGAATAGGCATCATAGCTACCTCATGATTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | AGCTTCCTTTCCTTGACACCTCCAGTTCCCTCACGCCTGATGAATTTACATGCTACATCCACCAATCCATaGATTCTTTGGGACAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SFLSLTPPVPSRLMNLHATSTNP*ILWDKP Trigger: GGGCTTGTCCCAAAGAATCCATGGATTGGTGGATGT...AGCATGTAAATTCATCAGGCGTGAGGGAACTGGAGGTGTCAAGGAAAGGAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR GCA 90 bp | ATGAATCATGAGGTAGCTATGATGCCTATTCCTAAATGTGTGAACGGGGTCTTCAGTGGGGCAGGCCCTTaGACAGGATTTTCTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: MNHEVAMMPIPKCVNGVFSGAGP*TGFSLL Trigger: AAGCAGAGAAAATCCTGTGCAAGGGCCTGCCCCACT...GAAGACCCCGTTCACACATTTAGGAATAGGCATCATAGCTACCTCATGATTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | ATTTACATGCTTCAGTTTGCTTATAAGGTCACTCTCCAAGCTAGGCTAGGTTCCGTGATAAGGGGACCCTaGAAGCACAAACTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IYMLQFAYKVTLQARLGSVIRGP*KHKLSR Trigger: CCTGGAGAGTTTGTGCTTCCAGGGTCCCCTTATCAC...GGAACCTAGCCTAGCTTGGAGAGTGACCTTATAAGCAAACTGAAGCATGTAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CCA 90 bp | TTTCACAACCCTGAGAAGTCTTACACTGAGGATGCAAACTCCTGTGCCACCAGGGCAATAAGCCTTCTTTaGGATTTGTCCTTCTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FHNPEKSYTEDANSCATRAISLL*DLSFCV Trigger: TACACAGAAGGACAAATCCCAAAGAAGGCTTATTGC...CCTGGTGGCACAGGAGTTTGCATCCTCAGTGTAAGACTTCTCAGGGTTGTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155301.8 |
||
| CDS-3UTR CCA 90 bp | ATGAATCATGAGGTAGCTATGATGCCTATTCCTAAATGTGTGAACGGGGTCTTCACATCCACCAATCCATaGATTCTTTGGGACAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: MNHEVAMMPIPKCVNGVFTSTNP*ILWDKP Trigger: GGGCTTGTCCCAAAGAATCCATGGATTGGTGGATGT...GAAGACCCCGTTCACACATTTAGGAATAGGCATCATAGCTACCTCATGATTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS GCA 90 bp | CCGCCCAGCACCAGCGAGCGCAGGGCTCGGAATCGGGTAAGGCCCTaGAGATGCTCATCGCGAAAGGCCGGCACTCGGTCCAGCACGATG | + |
|
Preference number: 5 (lower is better) Translates to: PPSTSERRARNRVRP*RCSSRKAGTRSSTM Trigger: CATCGTGCTGGACCGAGTGCCGGCCTTTCGCGATGAGCATCTGCAGGGCCTTACCCGATTCCGAGCCCTGCGCTCGCTGGTGCTGGGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000131343.8 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS GCA 90 bp | AGCACCAGCGAGCGCAGGGCTCGGAATCGGGTAAGGCCCTGCAGATaGTCATCGCGAAAGGCCGGCACTCGGTCCAGCACGATGCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: STSERRARNRVRPCR*SSRKAGTRSSTMHS Trigger: GGAATGCATCGTGCTGGACCGAGTGCCGGCCTTTCGCGATGAGCATCTGCAGGGCCTTACCCGATTCCGAGCCCTGCGCTCGCTGGTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000131343.8 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS GCA 90 bp | CCTGCAGATGCTCATCGCGAAAGGCCGGCACTCGGTCCAGCACGATaGATTCCAGCAGAGGCAGCACCGTGGGGTCCTGCTCTTTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PADAHRERPALGPAR*IPAEAAPWGPALSA Trigger: TGCAGAAAGAGCAGGACCCCACGGTGCTGCCTCTGCTGGAATGCATCGTGCTGGACCGAGTGCCGGCCTTTCGCGATGAGCATCTGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000131343.8 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS GCA 90 bp | ATAGCCACCGGTCATCCACTAGCCTCTTCCAGCGGTGACAGACCCTaGAGCCGGGATTCCGCGGTAGGAGGATTGTCTGGCTTGGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: IATGHPLASSSGDRP*SRDSAVGGLSGLGV Trigger: TACTCCCAAGCCAGACAATCCTCCTACCGCGGAATCCCGGCTGCAGGGTCTGTCACCGCTGGAAGAGGCTAGTGGATGACCGGTGGCTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151861.9 |
||
| CDS CCA 90 bp | CCGGCACTCGGTCCAGCACGATGCATTCCAGCAGAGGCAGCACCGTaGGGTCCTGCTCTTTCTGCAACCAGATCATGGAGATTTCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PALGPARCIPAEAAP*GPALSATRSWRFRS Trigger: GCTGCGAAATCTCCATGATCTGGTTGCAGAAAGAGCAGGACCCCACGGTGCTGCCTCTGCTGGAATGCATCGTGCTGGACCGAGTGCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000131343.8 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS TCA 90 bp | ACTATGCAGTGGGGCAGGCCCTTGCACAGGATTTTCTCTGCTTCCTaGCCCTCCCAGCCCAGCCCTTGCACCTCAAGCACTCTGAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TMQWGRPLHRIFSAS*PSQPSPCTSSTLSF Trigger: GAAGCTCAGAGTGCTTGAGGTGCAAGGGCTGGGCTGGGAGGGTCAGGAAGCAGAGAAAATCCTGTGCAAGGGCCTGCCCCACTGCATAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CAA 90 bp | CCCTCTCTAAGGTCTCTGGGGTGGCTCAGCAGCACAGCAGTGCTTCTCTACCAGACGGTCAGCCGAATCTaGCGCACATCTCGAAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PSLRSLGWLSSTAVLLYQTVSRI*RTSRRW Trigger: CCACCTTCGAGATGTGCGCAAGATTCGGCTGACCGT...CTGGTAGAGAAGCACTGCTGTGCTGCTGAGCCACCCCAGAGACCTTAGAGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CAA 90 bp | CACACACCTCCACTTGAAAATGAGCCCTCTCTAAGGTCTCTGGGGTGGCTCAGCCAGTGGGGCAGGCCCTaGCACAGGATTTTCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HTPPLENEPSLRSLGWLSQWGRP*HRIFSA Trigger: AGCAGAGAAAATCCTGTGCAAGGGCCTGCCCCACTG...GCTGAGCCACCCCAGAGACCTTAGAGAGGGCTCATTTTCAAGTGGAGGTGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CAA 90 bp | ACAATCCAACAGCATGCTCCCTTGCCCCTGCCCTCTATGCCTCTCAACCATGTAACGGTCAGCCGAATCTaGCGCACATCTCGAAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TIQQHAPLPLPSMPLNHVTVSRI*RTSRRW Trigger: CCACCTTCGAGATGTGCGCAAGATTCGGCTGACCGT...TACATGGTTGAGAGGCATAGAGGGCAGGGGCAAGGGAGCATGCTGTTGGATTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CAA 90 bp | CCTGAGAAGTCTTACACTGAGGATGCAAACTCCTGTGCCACCAGGCCGTGCCGAGGCAATAAGCCTTCTTaGGGATTTGTCCTTCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PEKSYTEDANSCATRPCRGNKPS*GFVLLC Trigger: ACACAGAAGGACAAATCCCAAAGAAGGCTTATTGCC...TCGGCACGGCCTGGTGGCACAGGAGTTTGCATCCTCAGTGTAAGACTTCTCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155301.8 |
||
| CDS-3UTR CAA 90 bp | ATGAATCATGAGGTAGCTATGATGCCTATTCCTAAATGTGTGAACGGGGTCTTCACGGTCAGCCGAATCTaGCGCACATCTCGAAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: MNHEVAMMPIPKCVNGVFTVSRI*RTSRRW Trigger: CCACCTTCGAGATGTGCGCAAGATTCGGCTGACCGT...GAAGACCCCGTTCACACATTTAGGAATAGGCATCATAGCTACCTCATGATTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS-3UTR CAA 90 bp | ATTTACATGCTTCAGTTTGCTTATAAGGTCACTCTCCAAGCTAGGCTAGGTTCCACGGTCAGCCGAATCTaGCGCACATCTCGAAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: IYMLQFAYKVTLQARLGSTVSRI*RTSRRW Trigger: CCACCTTCGAGATGTGCGCAAGATTCGGCTGACCGT...GGAACCTAGCCTAGCTTGGAGAGTGACCTTATAAGCAAACTGAAGCATGTAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS GCA 72 bp | GAGCGCAGGGCTCGGAATCGGGTAAGGCCCTGCAGATaGTCATCGCGAAAGGCCGGCACTCGGTCCAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: ERRARNRVRPCR*SSRKAGTRSST Trigger: CGTGCTGGACCGAGTGCCGGCCTTTCGCGATGAGCATCTGCAGGGCCTTACCCGATTCCGAGCCCTGCGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000131343.8 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS GCA 72 bp | ACCAGCGAGCGCAGGGCTCGGAATCGGGTAAGGCCCTaGAGATGCTCATCGCGAAAGGCCGGCACTCGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TSERRARNRVRP*RCSSRKAGTRS Trigger: GGACCGAGTGCCGGCCTTTCGCGATGAGCATCTGCAGGGCCTTACCCGATTCCGAGCCCTGCGCTCGCTGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000131343.8 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS GCA 72 bp | GCTCATCGCGAAAGGCCGGCACTCGGTCCAGCACGATaGATTCCAGCAGAGGCAGCACCGTGGGGTCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: AHRERPALGPAR*IPAEAAPWGPA Trigger: AGCAGGACCCCACGGTGCTGCCTCTGCTGGAATGCATCGTGCTGGACCGAGTGCCGGCCTTTCGCGATGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000131343.8 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS GCA 72 bp | GGTCATCCACTAGCCTCTTCCAGCGGTGACAGACCCTaGAGCCGGGATTCCGCGGTAGGAGGATTGTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GHPLASSSGDRP*SRDSAVGGLSG Trigger: GCCAGACAATCCTCCTACCGCGGAATCCCGGCTGCAGGGTCTGTCACCGCTGGAAGAGGCTAGTGGATGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151861.9 |
||
| CDS GCA 72 bp | ACGATGCATTCCAGCAGAGGCAGCACCGTGGGGTCCTaGTCTTTCTGCAACCAGATCATGGAGATTTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TMHSSRGSTVGS*SFCNQIMEISQ Trigger: CTGCGAAATCTCCATGATCTGGTTGCAGAAAGAGCAGGACCCCACGGTGCTGCCTCTGCTGGAATGCATCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000131343.8 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS CCA 72 bp | GATTCTTTGGGACAAGCCCTAACAATAACTATGCAGTaGGGCAGGCCCTTGCACAGGATTTTCTCTGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: DSLGQALTITMQ*GRPLHRIFSAS Trigger: GGAAGCAGAGAAAATCCTGTGCAAGGGCCTGCCCCACTGCATAGTTATTGTTAGGGCTTGTCCCAAAGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086458.10 ENSMUST00000086459.6 ENSMUST00000131128.2 ENSMUST00000140702.3 ENSMUST00000148631.8 ENSMUST00000151861.9 |
||
| CDS CAA 90 bp | ATGAACCAAGCAACAGTGAGACTGGCAATAAGCCTTCTTTGGGATTaGTCCTTCTGTGTACTTCATACGTGTAGAGCGTCAGGTCGACGT | + |
|
Preference number: 6 (lower is better) Translates to: MNQATVRLAISLLWD*SFCVLHTCRASGRR Trigger: ACGTCGACCTGACGCTCTACACGTATGAAGTACACAGAAGGACAAATCCCAAAGAAGGCTTATTGCCAGTCTCACTGTTGCTTGGTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155301.8 |
||
| CDS CCA 72 bp | AACCAAGCAACAGTGAGACTGGCAATAAGCCTTCTTTaGGATTTGTCCTTCTGTGTACTTCATACGTGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: NQATVRLAISLL*DLSFCVLHTCR Trigger: TCTACACGTATGAAGTACACAGAAGGACAAATCCCAAAGAAGGCTTATTGCCAGTCTCACTGTTGCTTGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155301.8 |
||