Pregenerated sensors for FBP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021456Ensembl transcript IDs: ENSMUST00000021907.9
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | CAGCAGGGCGCTGTTCTGACCGTGACCTGTGTCACTTaGCTTCTTTGCCTTTCCTCCCATCTCCATAGCTCA | + |
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Preference number: 3 (lower is better) Translates to: QQGAVLTVTCVT*LLCLSSHLHSS Trigger: TGAGCTATGGAGATGGGAGGAAAGGCAAAGAAGTCAAGTGACACAGGTCACGGTCAGAACAGCGCCCTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR CCA 90 bp | TTAGCAGCAGGGCGCTGTTCTGACCGTGACCTGTGTCACTTGACTTCTTTGCCTTTCCCCCTCCTCTCCTaGGCTGTGATCACCGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LAAGRCSDRDLCHLTSLPFPLLS*AVITAS Trigger: AGAGGCGGTGATCACAGCCCAGGAGAGGAGGGGGAA...AGGCAAAGAAGTCAAGTGACACAGGTCACGGTCAGAACAGCGCCCTGCTGCTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR GCA 90 bp | TTAGCAGCAGGGCGCTGTTCTGACCGTGACCTGTGTCACTTGACTTCTTTGCCTCTGGGTGCCTGTGGTTaGCATACCTCCTGCTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: LAAGRCSDRDLCHLTSLPLGACG*HTSCLL Trigger: GAGCAAGCAGGAGGTATGGCAACCACAGGCACCCAG...AGGCAAAGAAGTCAAGTGACACAGGTCACGGTCAGAACAGCGCCCTGCTGCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR GCA 90 bp | TTAGCAGCAGGGCGCTGTTCTGACCGTGACCTGTGTCACTTGACTTCTTTGCCTCCAGTACTGGCTGGGTaGCTGTGGTTGCCATACCTC | + |
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Preference number: 4 (lower is better) Translates to: LAAGRCSDRDLCHLTSLPPVLAG*LWLPYL Trigger: GAGGTATGGCAACCACAGGCACCCAGCCAGTACTGG...AGGCAAAGAAGTCAAGTGACACAGGTCACGGTCAGAACAGCGCCCTGCTGCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR TCA 90 bp | GGGCGCTGTTCTGACCGTGACCTGTGTCACTTGACTTCTTTGCCTTTCCTCCCACGGAAGAGATGGCTTTaGTGGCAGTCAGCATCGAGT | + |
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Preference number: 4 (lower is better) Translates to: GRCSDRDLCHLTSLPFLPRKRWL*WQSASS Trigger: ACTCGATGCTGACTGCCATCAAAGCCATCTCTTCCG...TGGGAGGAAAGGCAAAGAAGTCAAGTGACACAGGTCACGGTCAGAACAGCGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR GCA 90 bp | TCTAGTTTTTCAATTGACAAAGACAAAGGGAAGCGGGCTCATGGGTTCAGGCTCTGGCCAGGCCGGCCTTaGGCACTGCGGAAGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: SSFSIDKDKGKRAHGFRLWPGRP*ALRKRW Trigger: CCATCTCTTCCGCAGTGCGCAAGGCCGGCCTGGCCA...GAGCCTGAACCCATGAGCCCGCTTCCCTTTGTCTTTGTCAATTGAAAAACTAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR CCA 90 bp | TCTAGTTTTTCAATTGACAAAGACAAAGGGAAGCGGGCTCATGGGTTCAGGCTCATCGAGTTGAGCAGCTaGGTGAGTTCTCCGGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: SSFSIDKDKGKRAHGFRLIELSS*VSSPVP Trigger: AGGGACCGGAGAACTCACCCAGCTGCTCAACTCGAT...GAGCCTGAACCCATGAGCCCGCTTCCCTTTGTCTTTGTCAATTGAAAAACTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR TCA 90 bp | TCTAGTTTTTCAATTGACAAAGACAAAGGGAAGCGGGCTCATGGGTTCAGGCTCAGGGGGACTCGCTGGTaGATACTCTCAGGTTTCACA | + |
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Preference number: 4 (lower is better) Translates to: SSFSIDKDKGKRAHGFRLRGTRW*ILSGFT Trigger: TGTGAAACCTGAGAGTATTCACCAGCGAGTCCCCCT...GAGCCTGAACCCATGAGCCCGCTTCCCTTTGTCTTTGTCAATTGAAAAACTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR CCA 90 bp | TCTAGTTTTTCAATTGACAAAGACAAAGGGAAGCGGGCTCATGGGTTCAGGCTCCTACTCCTTGTCCTGTaGAAAGAGCGACCAGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: SSFSIDKDKGKRAHGFRLLLLVL*KERPGL Trigger: CAACCCTGGTCGCTCTTTCCACAGGACAAGGAGTAG...GAGCCTGAACCCATGAGCCCGCTTCCCTTTGTCTTTGTCAATTGAAAAACTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR CCA 90 bp | CATTCATCTAGTTTTTCAATTGACAAAGACAAAGGGAAGCGGGCTCATGGGTTCCTGGCTGGGTGCCTGTaGTTGCCATACCTCCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: HSSSFSIDKDKGKRAHGFLAGCL*LPYLLL Trigger: AAGCAGGAGGTATGGCAACCACAGGCACCCAGCCAG...GAACCCATGAGCCCGCTTCCCTTTGTCTTTGTCAATTGAAAAACTAGATGAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR GCA 90 bp | TTTGCCTTTCCTCCCATCTCCATAGCTCATTCATCTAGTTTTTCAATTGACAAACCGCAGCCACGATGTTaGGGCCAGGCTGCAAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: FAFPPISIAHSSSFSIDKPQPRC*GQAARH Trigger: ATGCCTTGCAGCCTGGCCGCAACATCGTGGCTGCGG...TTTGTCAATTGAAAAACTAGATGAATGAGCTATGGAGATGGGAGGAAAGGCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR GCA 90 bp | CATCTAGTTTTTCAATTGACAAAGACAAAGGGAAGCGGGCTCATGGGTTCAGGCCCTGCCTGGTTTCTCTaGACACAGCTGAGATACTCT | + |
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Preference number: 4 (lower is better) Translates to: HLVFQLTKTKGSGLMGSGPAWFL*TQLRYS Trigger: AGAGTATCTCAGCTGTGTGCAGAGAAACCAGGCAGG...GCCTGAACCCATGAGCCCGCTTCCCTTTGTCTTTGTCAATTGAAAAACTAGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR GCA 90 bp | CATTCATCTAGTTTTTCAATTGACAAAGACAAAGGGAAGCGGGCTCATGGGTTCAGACGAGCACACAGGTaGTGTAGGAGGACTGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: HSSSFSIDKDKGKRAHGFRRAHR*CRRTEA Trigger: TGCTTCAGTCCTCCTACAGCACCTGTGTGCTCGTCT...GAACCCATGAGCCCGCTTCCCTTTGTCTTTGTCAATTGAAAAACTAGATGAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR CCA 90 bp | TTCTTTGCCTTTCCTCCCATCTCCATAGCTCATTCATCTAGTTTTTCAATTGACGTTCTCCGGTCCCTTTaGCCTGTCGCCCCTTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: FFAFPPISIAHSSSFSIDVLRSL*PVAPFP Trigger: TGGAAAAGGGGCGACAGGCCAAAGGGACCGGAGAAC...GTCAATTGAAAAACTAGATGAATGAGCTATGGAGATGGGAGGAAAGGCAAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR CCA 90 bp | TTCTTTGCCTTTCCTCCCATCTCCATAGCTCATTCATCTAGTTTTTCAATTGACAAATCCCATACAGGTTaGCCAGGCCGGCCTTGCGCA | + |
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Preference number: 4 (lower is better) Translates to: FFAFPPISIAHSSSFSIDKSHTG*PGRPCA Trigger: TGCGCAAGGCCGGCCTGGCCAACCTGTATGGGATTT...GTCAATTGAAAAACTAGATGAATGAGCTATGGAGATGGGAGGAAAGGCAAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR TCA 90 bp | CATTCATCTAGTTTTTCAATTGACAAAGACAAAGGGAAGCGGGCTCATGGGTTCGGTTGGCTGGGTACATaGAGATTCCTCCATAGACCA | + |
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Preference number: 4 (lower is better) Translates to: HSSSFSIDKDKGKRAHGFGWLGT*RFLHRP Trigger: TGGTCTATGGAGGAATCTTCATGTACCCAGCCAACC...GAACCCATGAGCCCGCTTCCCTTTGTCTTTGTCAATTGAAAAACTAGATGAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR GCA 90 bp | TTCTTTGCCTTTCCTCCCATCTCCATAGCTCATTCATCTAGTTTTTCAATTGACCAGCTGAGATACTCTTaGACATCCTCAGGGGACCCC | + |
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Preference number: 4 (lower is better) Translates to: FFAFPPISIAHSSSFSIDQLRYS*TSSGDP Trigger: GGGGTCCCCTGAGGATGTGCAAGAGTATCTCAGCTG...GTCAATTGAAAAACTAGATGAATGAGCTATGGAGATGGGAGGAAAGGCAAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR CCA 90 bp | TTCTTTGCCTTTCCTCCCATCTCCATAGCTCATTCATCTAGTTTTTCAATTGACACATCCAGTACTGGCTaGGTGCCTGTGGTTGCCATA | + |
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Preference number: 4 (lower is better) Translates to: FFAFPPISIAHSSSFSIDTSSTG*VPVVAI Trigger: TATGGCAACCACAGGCACCCAGCCAGTACTGGATGT...GTCAATTGAAAAACTAGATGAATGAGCTATGGAGATGGGAGGAAAGGCAAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR CCA 90 bp | TTCTTTGCCTTTCCTCCCATCTCCATAGCTCATTCATCTAGTTTTTCAATTGACTTTCACATCCAGTACTaGCTGGGTGCCTGTGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: FFAFPPISIAHSSSFSIDFHIQY*LGACGC Trigger: GCAACCACAGGCACCCAGCCAGTACTGGATGTGAAA...GTCAATTGAAAAACTAGATGAATGAGCTATGGAGATGGGAGGAAAGGCAAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR GCA 90 bp | TTTGCCTTTCCTCCCATCTCCATAGCTCATTCATCTAGTTTTTCAATTGACAAAATGTTGCGGCCAGGCTaGAAGGCATCCTTCTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: FAFPPISIAHSSSFSIDKMLRPG*KASFSE Trigger: TTCTGAGAAGGATGCCTTGCAGCCTGGCCGCAACAT...TTTGTCAATTGAAAAACTAGATGAATGAGCTATGGAGATGGGAGGAAAGGCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR GCA 90 bp | TTCTTTGCCTTTCCTCCCATCTCCATAGCTCATTCATCTAGTTTTTCAATTGACTATAGGCCACAGGATTaGATTCATACAGGAGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: FFAFPPISIAHSSSFSIDYRPQD*IHTGAG Trigger: TCCGGCTCCTGTATGAATGCAATCCTGTGGCCTATA...GTCAATTGAAAAACTAGATGAATGAGCTATGGAGATGGGAGGAAAGGCAAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS TCA 90 bp | GTACTGGCTGGGTGCCTGTGGTTGCCATACCTCCTGCTTGCTCGATaGTATAGGCCACAGGATTGCATTCATACAGGAGCCGGAGCTTGC | + |
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Preference number: 5 (lower is better) Translates to: VLAGCLWLPYLLLAR*YRPQDCIHTGAGAC Trigger: GCAAGCTCCGGCTCCTGTATGAATGCAATCCTGTGGCCTATATCATCGAGCAAGCAGGAGGTATGGCAACCACAGGCACCCAGCCAGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS CCA 90 bp | GAGGGGGACTCGCTGGTGAATACTCTCAGGTTTCACATCCAGTACTaGCTGGGTGCCTGTGGTTGCCATACCTCCTGCTTGCTCGATGAT | + |
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Preference number: 5 (lower is better) Translates to: EGDSLVNTLRFHIQY*LGACGCHTSCLLDD Trigger: ATCATCGAGCAAGCAGGAGGTATGGCAACCACAGGCACCCAGCCAGTACTGGATGTGAAACCTGAGAGTATTCACCAGCGAGTCCCCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR CAA 90 bp | GGGCGCTGTTCTGACCGTGACCTGTGTCACTTGACTTCTTTGCCTTTCCTCCCATACAGGAGCCGGAGCTaGCCATTAGGACTCTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: GRCSDRDLCHLTSLPFLPYRSRS*PLGLFW Trigger: CCAGAAGAGTCCTAATGGCAAGCTCCGGCTCCTGTA...TGGGAGGAAAGGCAAAGAAGTCAAGTGACACAGGTCACGGTCAGAACAGCGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS GCA 90 bp | CATGAAGAGATCTACTCCTTGTCCTGTGGAAAGAGCGACCAGGGTTaGACTACCATACAGTGCATAACCCGCAGCCACGATGTTGCGGCC | + |
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Preference number: 5 (lower is better) Translates to: HEEIYSLSCGKSDQG*TTIQCITRSHDVAA Trigger: GGCCGCAACATCGTGGCTGCGGGTTATGCACTGTATGGTAGTGCAACCCTGGTCGCTCTTTCCACAGGACAAGGAGTAGATCTCTTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR CAA 90 bp | TCTAGTTTTTCAATTGACAAAGACAAAGGGAAGCGGGCTCATGGGTTCAGGCTCGAAATCCCATACAGGTaGGCCAGGCCGGCCTTGCGC | + |
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Preference number: 5 (lower is better) Translates to: SSFSIDKDKGKRAHGFRLEIPYR*ARPALR Trigger: GCGCAAGGCCGGCCTGGCCAACCTGTATGGGATTTC...GAGCCTGAACCCATGAGCCCGCTTCCCTTTGTCTTTGTCAATTGAAAAACTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR CAA 90 bp | GGGCGCTGTTCTGACCGTGACCTGTGTCACTTGACTTCTTTGCCTTTCCTCCCAGAAGAGATCTACTCCTaGTCCTGTGGAAAGAGCGAC | + |
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Preference number: 5 (lower is better) Translates to: GRCSDRDLCHLTSLPFLPEEIYS*SCGKSD Trigger: GTCGCTCTTTCCACAGGACAAGGAGTAGATCTCTTC...TGGGAGGAAAGGCAAAGAAGTCAAGTGACACAGGTCACGGTCAGAACAGCGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR CAA 90 bp | TCTAGTTTTTCAATTGACAAAGACAAAGGGAAGCGGGCTCATGGGTTCAGGCTCAGTTCTCCGGTCCCTTaGGCCTGTCGCCCCTTTTCC | + |
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Preference number: 5 (lower is better) Translates to: SSFSIDKDKGKRAHGFRLSSPVP*ACRPFS Trigger: GGAAAAGGGGCGACAGGCCAAAGGGACCGGAGAACT...GAGCCTGAACCCATGAGCCCGCTTCCCTTTGTCTTTGTCAATTGAAAAACTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR CAA 90 bp | TCTAGTTTTTCAATTGACAAAGACAAAGGGAAGCGGGCTCATGGGTTCAGGCTCGCTGGGTGCCTGTGGTaGCCATACCTCCTGCTTGCT | + |
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Preference number: 5 (lower is better) Translates to: SSFSIDKDKGKRAHGFRLAGCLW*PYLLLA Trigger: AGCAAGCAGGAGGTATGGCAACCACAGGCACCCAGC...GAGCCTGAACCCATGAGCCCGCTTCCCTTTGTCTTTGTCAATTGAAAAACTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS GCA 90 bp | TTTCACATCCAGTACTGGCTGGGTGCCTGTGGTTGCCATACCTCCTaGTTGCTCGATGATATAGGCCACAGGATTGCATTCATACAGGAG | + |
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Preference number: 5 (lower is better) Translates to: FHIQYWLGACGCHTS*LLDDIGHRIAFIQE Trigger: CTCCTGTATGAATGCAATCCTGTGGCCTATATCATCGAGCAAGCAGGAGGTATGGCAACCACAGGCACCCAGCCAGTACTGGATGTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR CAA 90 bp | CATTCATCTAGTTTTTCAATTGACAAAGACAAAGGGAAGCGGGCTCATGGGTTCGCGGAAGAGATGGCTTaGATGGCAGTCAGCATCGAG | + |
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Preference number: 5 (lower is better) Translates to: HSSSFSIDKDKGKRAHGFAEEMA*MAVSIE Trigger: CTCGATGCTGACTGCCATCAAAGCCATCTCTTCCGC...GAACCCATGAGCCCGCTTCCCTTTGTCTTTGTCAATTGAAAAACTAGATGAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR CAA 90 bp | TTCTTTGCCTTTCCTCCCATCTCCATAGCTCATTCATCTAGTTTTTCAATTGACACAGCTGAGATACTCTaGCACATCCTCAGGGGACCC | + |
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Preference number: 5 (lower is better) Translates to: FFAFPPISIAHSSSFSIDTAEIL*HILRGP Trigger: GGGTCCCCTGAGGATGTGCAAGAGTATCTCAGCTGT...GTCAATTGAAAAACTAGATGAATGAGCTATGGAGATGGGAGGAAAGGCAAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS-3UTR CAA 90 bp | TTTGCCTTTCCTCCCATCTCCATAGCTCATTCATCTAGTTTTTCAATTGACAAAGCAGTCAGCATCGAGTaGAGCAGCTGGGTGAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: FAFPPISIAHSSSFSIDKAVSIE*SSWVSS Trigger: AGAACTCACCCAGCTGCTCAACTCGATGCTGACTGC...TTTGTCAATTGAAAAACTAGATGAATGAGCTATGGAGATGGGAGGAAAGGCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS GCA 72 bp | TGTGGAAAGAGCGACCAGGGTTGCACTACCATACAGTaGATAACCCGCAGCCACGATGTTGCGGCCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: CGKSDQGCTTIQ*ITRSHDVAARL Trigger: CAGCCTGGCCGCAACATCGTGGCTGCGGGTTATGCACTGTATGGTAGTGCAACCCTGGTCGCTCTTTCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS CAA 90 bp | CACATCCAGTACTGGCTGGGTGCCTGTGGTTGCCATACCTCCTGCTaGCTCGATGATATAGGCCACAGGATTGCATTCATACAGGAGCCG | + |
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Preference number: 6 (lower is better) Translates to: HIQYWLGACGCHTSC*LDDIGHRIAFIQEP Trigger: CGGCTCCTGTATGAATGCAATCCTGTGGCCTATATCATCGAGCAAGCAGGAGGTATGGCAACCACAGGCACCCAGCCAGTACTGGATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS TCA 72 bp | GGGTGCCTGTGGTTGCCATACCTCCTGCTTGCTCGATaGTATAGGCCACAGGATTGCATTCATACAGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: GCLWLPYLLLAR*YRPQDCIHTGA Trigger: GGCTCCTGTATGAATGCAATCCTGTGGCCTATATCATCGAGCAAGCAGGAGGTATGGCAACCACAGGCACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS GCA 72 bp | CAGTACTGGCTGGGTGCCTGTGGTTGCCATACCTCCTaGTTGCTCGATGATATAGGCCACAGGATTGCATTC | + |
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Preference number: 6 (lower is better) Translates to: QYWLGACGCHTS*LLDDIGHRIAF Trigger: GAATGCAATCCTGTGGCCTATATCATCGAGCAAGCAGGAGGTATGGCAACCACAGGCACCCAGCCAGTACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS CCA 72 bp | TCGCTGGTGAATACTCTCAGGTTTCACATCCAGTACTaGCTGGGTGCCTGTGGTTGCCATACCTCCTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: SLVNTLRFHIQY*LGACGCHTSCL Trigger: CAAGCAGGAGGTATGGCAACCACAGGCACCCAGCCAGTACTGGATGTGAAACCTGAGAGTATTCACCAGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS CAA 72 bp | GATCTACTCCTTGTCCTGTGGAAAGAGCGACCAGGGTaGCACTACCATACAGTGCATAACCCGCAGCCACGA | + |
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Preference number: 6 (lower is better) Translates to: DLLLVLWKERPG*HYHTVHNPQPR Trigger: TCGTGGCTGCGGGTTATGCACTGTATGGTAGTGCAACCCTGGTCGCTCTTTCCACAGGACAAGGAGTAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS GCA 72 bp | ATCTACTCCTTGTCCTGTGGAAAGAGCGACCAGGGTTaGACTACCATACAGTGCATAACCCGCAGCCACGAT | + |
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Preference number: 6 (lower is better) Translates to: IYSLSCGKSDQG*TTIQCITRSHD Trigger: ATCGTGGCTGCGGGTTATGCACTGTATGGTAGTGCAACCCTGGTCGCTCTTTCCACAGGACAAGGAGTAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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| CDS CAA 72 bp | TACTGGCTGGGTGCCTGTGGTTGCCATACCTCCTGCTaGCTCGATGATATAGGCCACAGGATTGCATTCATA | + |
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Preference number: 6 (lower is better) Translates to: YWLGACGCHTSC*LDDIGHRIAFI Trigger: TATGAATGCAATCCTGTGGCCTATATCATCGAGCAAGCAGGAGGTATGGCAACCACAGGCACCCAGCCAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021907.9 |
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