Pregenerated sensors for FBP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069805Ensembl transcript IDs: ENSMUST00000092888.11, ENSMUST00000134814.2, ENSMUST00000150013.2
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAAAGTATGTCCAGCTTCTTTACTTGATCCCCAGTCACATTGGTTaGGCCAGCGATACCATAGTTATACCAGGAATCTGGGAGGAGCGA | + |
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Preference number: 1 (lower is better) Translates to: GKYVQLLYLIPSHIG*ASDTIVIPGIWEER Trigger: TCGCTCCTCCCAGATTCCTGGTATAACTATGGTATCGCTGGCTCAACCAATGTGACTGGGGATCAAGTAAAGAAGCTGGACATACTTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134814.2 |
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| 3UTR CCA 90 bp | CATTGGAAAGTATGTCCAGCTTCTTTACTTGATCCCCAGTCACATTaGTTGAGCCAGCGATACCATAGTTATACCAGGAATCTGGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: HWKVCPASLLDPQSH*LSQRYHSYTRNLGG Trigger: TCCTCCCAGATTCCTGGTATAACTATGGTATCGCTGGCTCAACCAATGTGACTGGGGATCAAGTAAAGAAGCTGGACATACTTTCCAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134814.2 |
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| 3UTR CAA 90 bp | TGGGAGGAGCGAAAAGGAGAGTTGAGACCAGAAGAGATCCGGCAATaGTGCACCAGGAGAAGGGAACGAGGGCTGTGTGCAGCAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: WEERKGELRPEEIRQ*CTRRRERGLCAAEQ Trigger: CTGCTCTGCTGCACACAGCCCTCGTTCCCTTCTCCTGGTGCACAATTGCCGGATCTCTTCTGGTCTCAACTCTCCTTTTCGCTCCTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134814.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCATTGCAAAGCATTAAGCTGTGAAACTATCCACGCTGTTAGGTTTGTTTCTTGGAGTAGCGTCACTTaGGCTCTGCTCTGGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: GHCKALSCETIHAVRFVSWSSVT*ALLWGR Trigger: CCTGCCCCAGAGCAGAGCTCAAGTGACGCTACTCCA...AGAAACAAACCTAACAGCGTGGATAGTTTCACAGCTTAATGCTTTGCAATGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092888.11 ENSMUST00000150013.2 |
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| 3UTR-3UTR GCA 90 bp | GAAACTATCCACGCTGTTAGGTTTGTTTCTAGGAATGTACAACATGCAGAATGGGCGTCACTTGAGCTCTaGTCTGGGGCAGGGGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: ETIHAVRFVSRNVQHAEWASLEL*SGAGAR Trigger: CCTTGCCCCTGCCCCAGAGCAGAGCTCAAGTGACGC...CCATTCTGCATGTTGTACATTCCTAGAAACAAACCTAACAGCGTGGATAGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092888.11 ENSMUST00000150013.2 |
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| 3UTR CAA 90 bp | TGGAAAGTATGTCCAGCTTCTTTACTTGATCCCCAGTCACATTGGTaGAGCCAGCGATACCATAGTTATACCAGGAATCTGGGAGGAGCG | + |
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Preference number: 2 (lower is better) Translates to: WKVCPASLLDPQSHW*SQRYHSYTRNLGGA Trigger: CGCTCCTCCCAGATTCCTGGTATAACTATGGTATCGCTGGCTCAACCAATGTGACTGGGGATCAAGTAAAGAAGCTGGACATACTTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134814.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCTTCTCAGGTTCGATTATGATGGCATTTGTGTTTTCTTCAGACACAAGAACAGCGAAAAGGAGAGTTaGGACCAGAAGAGATCCGGC | + |
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Preference number: 2 (lower is better) Translates to: PLLRFDYDGICVFFRHKNSEKES*DQKRSG Trigger: GCCGGATCTCTTCTGGTCTCAACTCTCCTTTTCGCT...GTTCTTGTGTCTGAAGAAAACACAAATGCCATCATAATCGAACCTGAGAAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134814.2 |
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| 3UTR CCA 72 bp | GCAGCAGAGCAGAATCTTAACTGTCAGATGCGACACTaGCAACCAGACCCATCAGGACCCAGCAGGGGTCCA | + |
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Preference number: 3 (lower is better) Translates to: AAEQNLNCQMRH*QPDPSGPSRGP Trigger: TGGACCCCTGCTGGGTCCTGATGGGTCTGGTTGCCAGTGTCGCATCTGACAGTTAAGATTCTGCTCTGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134814.2 |
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| 3UTR GCA 72 bp | GGCTGTGTGCAGCAGAGCAGAATCTTAACTGTCAGATaGGACACTGGCAACCAGACCCATCAGGACCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: GCVQQSRILTVR*DTGNQTHQDPA Trigger: TGCTGGGTCCTGATGGGTCTGGTTGCCAGTGTCGCATCTGACAGTTAAGATTCTGCTCTGCTGCACACAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134814.2 |
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| 3UTR TCA 72 bp | TTATACCAGGAATCTGGGAGGAGCGAAAAGGAGAGTTaGGACCAGAAGAGATCCGGCAATTGTGCACCAGGA | + |
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Preference number: 3 (lower is better) Translates to: LYQESGRSEKES*DQKRSGNCAPG Trigger: TCCTGGTGCACAATTGCCGGATCTCTTCTGGTCTCAACTCTCCTTTTCGCTCCTCCCAGATTCCTGGTATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134814.2 |
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| 3UTR TCA 72 bp | GTCCAGCTTCTTTACTTGATCCCCAGTCACATTGGTTaGGCCAGCGATACCATAGTTATACCAGGAATCTGG | + |
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Preference number: 3 (lower is better) Translates to: VQLLYLIPSHIG*ASDTIVIPGIW Trigger: CCAGATTCCTGGTATAACTATGGTATCGCTGGCTCAACCAATGTGACTGGGGATCAAGTAAAGAAGCTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134814.2 |
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| 3UTR TCA 72 bp | ACCAGGTCATTGGAAAGTATGTCCAGCTTCTTTACTTaGTCCCCAGTCACATTGGTTGAGCCAGCGATACCA | + |
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Preference number: 3 (lower is better) Translates to: TRSLESMSSFFT*SPVTLVEPAIP Trigger: TGGTATCGCTGGCTCAACCAATGTGACTGGGGATCAAGTAAAGAAGCTGGACATACTTTCCAATGACCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134814.2 |
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| 3UTR CCA 72 bp | GTATGTCCAGCTTCTTTACTTGATCCCCAGTCACATTaGTTGAGCCAGCGATACCATAGTTATACCAGGAAT | + |
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Preference number: 3 (lower is better) Translates to: VCPASLLDPQSH*LSQRYHSYTRN Trigger: ATTCCTGGTATAACTATGGTATCGCTGGCTCAACCAATGTGACTGGGGATCAAGTAAAGAAGCTGGACATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134814.2 |
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| 3UTR TCA 72 bp | AGACAACATATTTGCCCCTCTTCTCAGGTTCGATTATaGTGGCATTTGTGTTTTCTTCAGACACAAGAACAC | + |
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Preference number: 3 (lower is better) Translates to: RQHICPSSQVRL*WHLCFLQTQEH Trigger: GTGTTCTTGTGTCTGAAGAAAACACAAATGCCATCATAATCGAACCTGAGAAGAGGGGCAAATATGTTGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134814.2 |
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| CDS-3UTR TCA 90 bp | CAGAATGGAGTAGCGTCACTTGAGCTCTGCTCTGGGGCAGGGGCAAGGCTGGCCCTTCAGAGGACCCCATaGCGACTGGTGCCTTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: QNGVASLELCSGAGARLALQRTP*RLVPSG Trigger: ACCAGAAGGCACCAGTCGTCATGGGGTCCTCTGAAG...GGCCAGCCTTGCCCCTGCCCCAGAGCAGAGCTCAAGTGACGCTACTCCATTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000092888.11 ENSMUST00000150013.2 |
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| CDS-3UTR TCA 90 bp | AGGGAACGAGGGCTGTGTGCAGCAGAGCAGAATCTTAACTGTCAGATGCGACACAACTCCCCCGTGCCCTaGGCCTTCCTGCCCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RERGLCAAEQNLNCQMRHNSPVP*AFLPCS Trigger: GGAGCAGGGCAGGAAGGCTCAGGGCACGGGGGAGTT...GTGTCGCATCTGACAGTTAAGATTCTGCTCTGCTGCACACAGCCCTCGTTCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134814.2 |
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| 3UTR CAA 72 bp | CGAAAAGGAGAGTTGAGACCAGAAGAGATCCGGCAATaGTGCACCAGGAGAAGGGAACGAGGGCTGTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: RKGELRPEEIRQ*CTRRRERGLCA Trigger: TGCACACAGCCCTCGTTCCCTTCTCCTGGTGCACAATTGCCGGATCTCTTCTGGTCTCAACTCTCCTTTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134814.2 |
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| CDS-3UTR TCA 90 bp | CTATCCACGCTGTTAGGTTTGTTTCTAGGAATGTACAACATGCAGAATGGAGTAAACTCCCCCGTGCCCTaGGCCTTCCTGCCCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LSTLLGLFLGMYNMQNGVNSPVP*AFLPCS Trigger: GGAGCAGGGCAGGAAGGCTCAGGGCACGGGGGAGTT...TACTCCATTCTGCATGTTGTACATTCCTAGAAACAAACCTAACAGCGTGGATAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092888.11 |
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| CDS-3UTR CCA 90 bp | GAAACTATCCACGCTGTTAGGTTTGTTTCTAGGAATGTACAACATGCAGAATGGTGTGCGATGCCCGCCTaGCGCACCGCAGACGAGATG | + |
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Preference number: 4 (lower is better) Translates to: ETIHAVRFVSRNVQHAEWCAMPA*RTADEM Trigger: CATCTCGTCTGCGGTGCGCCAGGCGGGCATCGCACA...CCATTCTGCATGTTGTACATTCCTAGAAACAAACCTAACAGCGTGGATAGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092888.11 |
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| CDS-3UTR CCA 90 bp | CCTCTTCTCAGGTTCGATTATGATGGCATTTGTGTTTTCTTCAGACACAAGAACTGTGCGATGCCCGCCTaGCGCACCGCAGACGAGATG | + |
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Preference number: 4 (lower is better) Translates to: PLLRFDYDGICVFFRHKNCAMPA*RTADEM Trigger: CATCTCGTCTGCGGTGCGCCAGGCGGGCATCGCACA...GTTCTTGTGTCTGAAGAAAACACAAATGCCATCATAATCGAACCTGAGAAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134814.2 |
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| CDS-3UTR CCA 90 bp | CCCCTCTTCTCAGGTTCGATTATGATGGCATTTGTGTTTTCTTCAGACACAAGAAGCGAATTCAGCAGCTaGGTCAACTCCCCCGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: PLFSGSIMMAFVFSSDTRSEFSS*VNSPVP Trigger: GGGCACGGGGGAGTTGACCCAGCTGCTGAATTCGCT...TCTTGTGTCTGAAGAAAACACAAATGCCATCATAATCGAACCTGAGAAGAGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000134814.2 |
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| CDS-3UTR GCA 90 bp | CTATCCACGCTGTTAGGTTTGTTTCTAGGAATGTACAACATGCAGAATGGAGTAAGGTCCCGGCCGGGCTaGAGAGCATCCTTCTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: LSTLLGLFLGMYNMQNGVRSRPG*RASFSE Trigger: TTCTGAGAAGGATGCTCTGCAGCCCGGCCGGGACCT...TACTCCATTCTGCATGTTGTACATTCCTAGAAACAAACCTAACAGCGTGGATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092888.11 ENSMUST00000150013.2 |
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| CDS-3UTR CCA 90 bp | CTATCCACGCTGTTAGGTTTGTTTCTAGGAATGTACAACATGCAGAATGGAGTAAGCGAATTCAGCAGCTaGGTCAACTCCCCCGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: LSTLLGLFLGMYNMQNGVSEFSS*VNSPVP Trigger: GGGCACGGGGGAGTTGACCCAGCTGCTGAATTCGCT...TACTCCATTCTGCATGTTGTACATTCCTAGAAACAAACCTAACAGCGTGGATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092888.11 |
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| CDS-3UTR TCA 90 bp | CTGTTAGGTTTGTTTCTAGGAATGTACAACATGCAGAATGGAGTAGCGTCACTTCTTCAGAGGACCCCATaGCGACTGGTGCCTTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LLGLFLGMYNMQNGVASLLQRTP*RLVPSG Trigger: ACCAGAAGGCACCAGTCGTCATGGGGTCCTCTGAAG...AAGTGACGCTACTCCATTCTGCATGTTGTACATTCCTAGAAACAAACCTAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092888.11 ENSMUST00000150013.2 |
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| CDS-3UTR GCA 90 bp | GTGAAACTATCCACGCTGTTAGGTTTGTTTCTAGGAATGTACAACATGCAGAATAGGTCCCGGCCGGGCTaGAGAGCATCCTTCTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: VKLSTLLGLFLGMYNMQNRSRPG*RASFSE Trigger: TTCTGAGAAGGATGCTCTGCAGCCCGGCCGGGACCT...ATTCTGCATGTTGTACATTCCTAGAAACAAACCTAACAGCGTGGATAGTTTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092888.11 ENSMUST00000150013.2 |
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| CDS-3UTR CCA 90 bp | GCTGTGAAACTATCCACGCTGTTAGGTTTGTTTCTAGGAATGTACAACATGCAGCAAGGACCAACATGGTaGCACTGCCATAGAGCGCAT | + |
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Preference number: 4 (lower is better) Translates to: AVKLSTLLGLFLGMYNMQQGPTW*HCHRAH Trigger: ATGCGCTCTATGGCAGTGCCACCATGTTGGTCCTTG...CTGCATGTTGTACATTCCTAGAAACAAACCTAACAGCGTGGATAGTTTCACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092888.11 ENSMUST00000150013.2 |
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| CDS-3UTR CCA 90 bp | CTGTTAGGTTTGTTTCTAGGAATGTACAACATGCAGAATGGAGTAGCGTCACTTTGGCAAGGACCAACATaGTGGCACTGCCATAGAGCG | + |
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Preference number: 4 (lower is better) Translates to: LLGLFLGMYNMQNGVASLWQGPT*WHCHRA Trigger: CGCTCTATGGCAGTGCCACCATGTTGGTCCTTGCCA...AAGTGACGCTACTCCATTCTGCATGTTGTACATTCCTAGAAACAAACCTAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092888.11 ENSMUST00000150013.2 |
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| CDS-3UTR CCA 90 bp | CTATCCACGCTGTTAGGTTTGTTTCTAGGAATGTACAACATGCAGAATGGAGTACCGCAGCTTTCCACTTaGGCTTTTCTTGTTGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: LSTLLGLFLGMYNMQNGVPQLST*AFLVGG Trigger: CCCGCCAACAAGAAAAGCCCAAGTGGAAAGCTGCGG...TACTCCATTCTGCATGTTGTACATTCCTAGAAACAAACCTAACAGCGTGGATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092888.11 |
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| CDS-3UTR CCA 90 bp | CTGTTAGGTTTGTTTCTAGGAATGTACAACATGCAGAATGGAGTAGCGTCACTTCAAGGACCAACATGGTaGCACTGCCATAGAGCGCAT | + |
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Preference number: 4 (lower is better) Translates to: LLGLFLGMYNMQNGVASLQGPTW*HCHRAH Trigger: ATGCGCTCTATGGCAGTGCCACCATGTTGGTCCTTG...AAGTGACGCTACTCCATTCTGCATGTTGTACATTCCTAGAAACAAACCTAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092888.11 ENSMUST00000150013.2 |
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| CDS-3UTR CCA 90 bp | GTGAAACTATCCACGCTGTTAGGTTTGTTTCTAGGAATGTACAACATGCAGAATTGGCAAGGACCAACATaGTGGCACTGCCATAGAGCG | + |
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Preference number: 4 (lower is better) Translates to: VKLSTLLGLFLGMYNMQNWQGPT*WHCHRA Trigger: CGCTCTATGGCAGTGCCACCATGTTGGTCCTTGCCA...ATTCTGCATGTTGTACATTCCTAGAAACAAACCTAACAGCGTGGATAGTTTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092888.11 ENSMUST00000150013.2 |
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| 3UTR CAA 72 bp | TGTCCAGCTTCTTTACTTGATCCCCAGTCACATTGGTaGAGCCAGCGATACCATAGTTATACCAGGAATCTG | + |
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Preference number: 4 (lower is better) Translates to: CPASLLDPQSHW*SQRYHSYTRNL Trigger: CAGATTCCTGGTATAACTATGGTATCGCTGGCTCAACCAATGTGACTGGGGATCAAGTAAAGAAGCTGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134814.2 |
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| CDS-3UTR TCA 90 bp | GAAACTATCCACGCTGTTAGGTTTGTTTCTAGGAATGTACAACATGCAGAATGGGCAGTCAATGTTGGATaGGCCATCAAGGGGATCGAA | + |
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Preference number: 4 (lower is better) Translates to: ETIHAVRFVSRNVQHAEWAVNVG*AIKGIE Trigger: TTCGATCCCCTTGATGGCTCATCCAACATTGACTGC...CCATTCTGCATGTTGTACATTCCTAGAAACAAACCTAACAGCGTGGATAGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092888.11 |
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| CDS-3UTR GCA 90 bp | GTGAAACTATCCACGCTGTTAGGTTTGTTTCTAGGAATGTACAACATGCAGAATATCTCCAGGAACTCCTaGACATCTTCAGAGGACCCC | + |
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Preference number: 4 (lower is better) Translates to: VKLSTLLGLFLGMYNMQNISRNS*TSSEDP Trigger: GGGGTCCTCTGAAGATGTGCAGGAGTTCCTGGAGAT...ATTCTGCATGTTGTACATTCCTAGAAACAAACCTAACAGCGTGGATAGTTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092888.11 ENSMUST00000150013.2 |
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| CDS-3UTR GCA 90 bp | GCATTAAGCTGTGAAACTATCCACGCTGTTAGGTTTGTTTCTAGGAATGTACAAATCTCCAGGAACTCCTaGACATCTTCAGAGGACCCC | + |
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Preference number: 4 (lower is better) Translates to: ALSCETIHAVRFVSRNVQISRNS*TSSEDP Trigger: GGGGTCCTCTGAAGATGTGCAGGAGTTCCTGGAGAT...TTGTACATTCCTAGAAACAAACCTAACAGCGTGGATAGTTTCACAGCTTAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092888.11 ENSMUST00000150013.2 |
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| 3UTR CAA 72 bp | GATGAGCCATCAAGGGGATCGAAACAGACAACATATTaGCCCCTCTTCTCAGGTTCGATTATGATGGCATTT | + |
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Preference number: 4 (lower is better) Translates to: DEPSRGSKQTTY*PLFSGSIMMAF Trigger: AAATGCCATCATAATCGAACCTGAGAAGAGGGGCAAATATGTTGTCTGTTTCGATCCCCTTGATGGCTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134814.2 |
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| CDS-3UTR TCA 90 bp | AGCTGTGAAACTATCCACGCTGTTAGGTTTGTTTCTAGGAATGTACAACATGCATCTGGAGATACTCATTaGTGGCAGGGTCAAAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: SCETIHAVRFVSRNVQHASGDTH*WQGQSP Trigger: AGGACTTTGACCCTGCCATCAATGAGTATCTCCAGA...TGCATGTTGTACATTCCTAGAAACAAACCTAACAGCGTGGATAGTTTCACAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092888.11 |
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| CDS-3UTR TCA 90 bp | CTGTTAGGTTTGTTTCTAGGAATGTACAACATGCAGAATGGAGTAGCGTCACTTTCCAGCTTCTTTACTTaGTCCCCAGTCACATTGGTT | + |
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Preference number: 4 (lower is better) Translates to: LLGLFLGMYNMQNGVASLSSFFT*SPVTLV Trigger: AACCAATGTGACTGGGGATCAAGTAAAGAAGCTGGA...AAGTGACGCTACTCCATTCTGCATGTTGTACATTCCTAGAAACAAACCTAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092888.11 |
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| CDS-3UTR GCA 90 bp | TGTGAAACTATCCACGCTGTTAGGTTTGTTTCTAGGAATGTACAACATGCAGAACTCCATATACCAGAGTaGGGTGAATATCAGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: CETIHAVRFVSRNVQHAELHIPE*GEYQPP Trigger: TGGTGGCTGATATTCACCGCACTCTGGTATATGGAG...TTCTGCATGTTGTACATTCCTAGAAACAAACCTAACAGCGTGGATAGTTTCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092888.11 |
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| CDS-3UTR CCA 90 bp | GCATTAAGCTGTGAAACTATCCACGCTGTTAGGTTTGTTTCTAGGAATGTACAACAAGGCAGTCAATGTTaGATGAGCCATCAAGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: ALSCETIHAVRFVSRNVQQGSQC*MSHQGD Trigger: ATCCCCTTGATGGCTCATCCAACATTGACTGCCTTG...TTGTACATTCCTAGAAACAAACCTAACAGCGTGGATAGTTTCACAGCTTAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092888.11 |
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| CDS-3UTR CCA 90 bp | CTGTTAGGTTTGTTTCTAGGAATGTACAACATGCAGAATGGAGTAGCGTCACTTGGGAACTTTTTCCTCTaGAGATACTCATTGATGGCA | + |
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Preference number: 4 (lower is better) Translates to: LLGLFLGMYNMQNGVASLGNFFL*RYSLMA Trigger: TGCCATCAATGAGTATCTCCAGAGGAAAAAGTTCCC...AAGTGACGCTACTCCATTCTGCATGTTGTACATTCCTAGAAACAAACCTAACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092888.11 |
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| CDS-3UTR TCA 90 bp | CTATCCACGCTGTTAGGTTTGTTTCTAGGAATGTACAACATGCAGAATGGAGTATCTCAGGTTCGATTATaGTGGCATTTGTGTTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LSTLLGLFLGMYNMQNGVSQVRL*WHLCFL Trigger: AAGAAAACACAAATGCCATCATAATCGAACCTGAGA...TACTCCATTCTGCATGTTGTACATTCCTAGAAACAAACCTAACAGCGTGGATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092888.11 |
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| CDS-3UTR GCA 90 bp | TGTGAAACTATCCACGCTGTTAGGTTTGTTTCTAGGAATGTACAACATGCAGAATTTTCTTTCTGTAAATaGCAAAAATGGTTCCGATGG | + |
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Preference number: 4 (lower is better) Translates to: CETIHAVRFVSRNVQHAEFSFCK*QKWFRW Trigger: CCATCGGAACCATTTTTGGCATTTACAGAAAGAAAA...TTCTGCATGTTGTACATTCCTAGAAACAAACCTAACAGCGTGGATAGTTTCACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092888.11 ENSMUST00000150013.2 |
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| CDS-3UTR GCA 90 bp | GTGAAACTATCCACGCTGTTAGGTTTGTTTCTAGGAATGTACAACATGCAGAATTTTTCTTTCTGTAAATaGCAAAAATGGTTCCGATGG | + |
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Preference number: 4 (lower is better) Translates to: VKLSTLLGLFLGMYNMQNFSFCK*QKWFRW Trigger: CCATCGGAACCATTTTTGGCATTTACAGAAAGAAAA...ATTCTGCATGTTGTACATTCCTAGAAACAAACCTAACAGCGTGGATAGTTTCAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000092888.11 ENSMUST00000150013.2 |
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| CDS-3UTR CAA 90 bp | CAGAATGGAGTAGCGTCACTTGAGCTCTGCTCTGGGGCAGGGGCAAGGCTGGCCCTCTGGAGATACTCATaGATGGCAGGGTCAAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: QNGVASLELCSGAGARLALWRYS*MAGSKS Trigger: GGACTTTGACCCTGCCATCAATGAGTATCTCCAGAG...GGCCAGCCTTGCCCCTGCCCCAGAGCAGAGCTCAAGTGACGCTACTCCATTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092888.11 |
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| CDS-3UTR CAA 90 bp | CCAGGAATCTGGGAGGAGCGAAAAGGAGAGTTGAGACCAGAAGAGATCCGGCAAGCAGACGAGATGGCTTaGATCGCGGTGCAGAGCGAA | + |
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Preference number: 5 (lower is better) Translates to: PGIWEERKGELRPEEIRQADEMA*IAVQSE Trigger: TTCGCTCTGCACCGCGATCAAAGCCATCTCGTCTGC...TTGCCGGATCTCTTCTGGTCTCAACTCTCCTTTTCGCTCCTCCCAGATTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134814.2 |
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| CDS TCA 90 bp | GGAAAGTATGTCCAGCTTCTTTACTTGATCCCCAGTCACATTGGTTaGGCCAGCGATACCATAGAGCTGTGCGATGCCCGCCTGGCGCAC | + |
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Preference number: 5 (lower is better) Translates to: GKYVQLLYLIPSHIG*ASDTIELCDARLAH Trigger: GTGCGCCAGGCGGGCATCGCACAGCTCTATGGTATCGCTGGCTCAACCAATGTGACTGGGGATCAAGTAAAGAAGCTGGACATACTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092888.11 |
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| CDS TCA 90 bp | TCCTGTAGATCTCCAGGAACTCCTGCACATCTTCAGAGGACCCCATaGCGACTGGTGCCTTCTGGTGGATCTCGGTGGGAACGATGTCTA | + |
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Preference number: 5 (lower is better) Translates to: SCRSPGTPAHLQRTP*RLVPSGGSRWERCL Trigger: TAGACATCGTTCCCACCGAGATCCACCAGAAGGCACCAGTCGTCATGGGGTCCTCTGAAGATGTGCAGGAGTTCCTGGAGATCTACAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092888.11 ENSMUST00000150013.2 |
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| CDS CCA 90 bp | TCCTGCACATCTTCAGAGGACCCCATGACGACTGGTGCCTTCTGGTaGATCTCGGTGGGAACGATGTCTAATATATCTTTGTCCCCCGTG | + |
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Preference number: 5 (lower is better) Translates to: SCTSSEDPMTTGAFW*ISVGTMSNISLSPV Trigger: CACGGGGGACAAAGATATATTAGACATCGTTCCCACCGAGATCCACCAGAAGGCACCAGTCGTCATGGGGTCCTCTGAAGATGTGCAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092888.11 ENSMUST00000150013.2 |
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| CDS CCA 90 bp | CATTGGAAAGTATGTCCAGCTTCTTTACTTGATCCCCAGTCACATTaGTTGAGCCAGCGATACCATAGAGCTGTGCGATGCCCGCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: HWKVCPASLLDPQSH*LSQRYHRAVRCPPG Trigger: GCCAGGCGGGCATCGCACAGCTCTATGGTATCGCTGGCTCAACCAATGTGACTGGGGATCAAGTAAAGAAGCTGGACATACTTTCCAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092888.11 |
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| CDS CCA 90 bp | AACTCCTGCACATCTTCAGAGGACCCCATGACGACTGGTGCCTTCTaGTGGATCTCGGTGGGAACGATGTCTAATATATCTTTGTCCCCC | + |
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Preference number: 5 (lower is better) Translates to: NSCTSSEDPMTTGAF*WISVGTMSNISLSP Trigger: GGGGGACAAAGATATATTAGACATCGTTCCCACCGAGATCCACCAGAAGGCACCAGTCGTCATGGGGTCCTCTGAAGATGTGCAGGAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092888.11 ENSMUST00000150013.2 |
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| CDS-3UTR CAA 90 bp | GAAACTATCCACGCTGTTAGGTTTGTTTCTAGGAATGTACAACATGCAGAATGGGCCGCAGCTTTCCACTaGGGCTTTTCTTGTTGGCGG | + |
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Preference number: 5 (lower is better) Translates to: ETIHAVRFVSRNVQHAEWAAAFH*GFSCWR Trigger: CCGCCAACAAGAAAAGCCCAAGTGGAAAGCTGCGGC...CCATTCTGCATGTTGTACATTCCTAGAAACAAACCTAACAGCGTGGATAGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092888.11 |
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| CDS-3UTR CAA 90 bp | GTGAAACTATCCACGCTGTTAGGTTTGTTTCTAGGAATGTACAACATGCAGAATGCAGACGAGATGGCTTaGATCGCGGTGCAGAGCGAA | + |
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Preference number: 5 (lower is better) Translates to: VKLSTLLGLFLGMYNMQNADEMA*IAVQSE Trigger: TTCGCTCTGCACCGCGATCAAAGCCATCTCGTCTGC...ATTCTGCATGTTGTACATTCCTAGAAACAAACCTAACAGCGTGGATAGTTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092888.11 |
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| CDS-3UTR CAA 90 bp | CTGTTAGGTTTGTTTCTAGGAATGTACAACATGCAGAATGGAGTAGCGTCACTTACAAGGCAGTCAATGTaGGATGAGCCATCAAGGGGA | + |
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Preference number: 5 (lower is better) Translates to: LLGLFLGMYNMQNGVASLTRQSM*DEPSRG Trigger: TCCCCTTGATGGCTCATCCAACATTGACTGCCTTGT...AAGTGACGCTACTCCATTCTGCATGTTGTACATTCCTAGAAACAAACCTAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092888.11 |
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| CDS-3UTR CAA 90 bp | GCTGTGAAACTATCCACGCTGTTAGGTTTGTTTCTAGGAATGTACAACATGCAGAAACAGACAACATATTaGCCCCTCTTCTCAGGTTCG | + |
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Preference number: 5 (lower is better) Translates to: AVKLSTLLGLFLGMYNMQKQTTY*PLFSGS Trigger: CGAACCTGAGAAGAGGGGCAAATATGTTGTCTGTTT...CTGCATGTTGTACATTCCTAGAAACAAACCTAACAGCGTGGATAGTTTCACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092888.11 |
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| CDS-3UTR CAA 90 bp | GCATTAAGCTGTGAAACTATCCACGCTGTTAGGTTTGTTTCTAGGAATGTACAATCCAGCATGAAGCAGTaGACACCACAATCCATGGCA | + |
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Preference number: 5 (lower is better) Translates to: ALSCETIHAVRFVSRNVQSSMKQ*TPQSMA Trigger: TGCCATGGATTGTGGTGTCAACTGCTTCATGCTGGA...TTGTACATTCCTAGAAACAAACCTAACAGCGTGGATAGTTTCACAGCTTAATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092888.11 ENSMUST00000150013.2 |
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| CDS GCA 72 bp | CACCACAATCCATGGCAAGGACCAACATGGTGGCACTaGCATAGAGCGCATACCCGGCTGCCACCAGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: HHNPWQGPTWWH*HRAHTRLPPGP Trigger: GGGACCTGGTGGCAGCCGGGTATGCGCTCTATGGCAGTGCCACCATGTTGGTCCTTGCCATGGATTGTGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092888.11 ENSMUST00000150013.2 |
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| CDS CAA 90 bp | GGGTTGCACTCATACAGCAGCCGCAGCGGGTCCAGCATGAAGCAGTaGACACCACAATCCATGGCAAGGACCAACATGGTGGCACTGCCA | + |
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Preference number: 6 (lower is better) Translates to: GLHSYSSRSGSSMKQ*TPQSMARTNMVALP Trigger: TGGCAGTGCCACCATGTTGGTCCTTGCCATGGATTGTGGTGTCAACTGCTTCATGCTGGACCCGCTGCGGCTGCTGTATGAGTGCAACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150013.2 |
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| CDS TCA 72 bp | TCTCCAGGAACTCCTGCACATCTTCAGAGGACCCCATaGCGACTGGTGCCTTCTGGTGGATCTCGGTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: SPGTPAHLQRTP*RLVPSGGSRWE Trigger: TTCCCACCGAGATCCACCAGAAGGCACCAGTCGTCATGGGGTCCTCTGAAGATGTGCAGGAGTTCCTGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092888.11 ENSMUST00000150013.2 |
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| CDS CCA 72 bp | GAACTCCTGCACATCTTCAGAGGACCCCATGACGACTaGTGCCTTCTGGTGGATCTCGGTGGGAACGATGTC | + |
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Preference number: 6 (lower is better) Translates to: ELLHIFRGPHDD*CLLVDLGGNDV Trigger: GACATCGTTCCCACCGAGATCCACCAGAAGGCACCAGTCGTCATGGGGTCCTCTGAAGATGTGCAGGAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092888.11 ENSMUST00000150013.2 |
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| CDS CAA 72 bp | TCATACAGCAGCCGCAGCGGGTCCAGCATGAAGCAGTaGACACCACAATCCATGGCAAGGACCAACATGGTG | + |
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Preference number: 6 (lower is better) Translates to: SYSSRSGSSMKQ*TPQSMARTNMV Trigger: CACCATGTTGGTCCTTGCCATGGATTGTGGTGTCAACTGCTTCATGCTGGACCCGCTGCGGCTGCTGTATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150013.2 |
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| CDS TCA 72 bp | GTCCAGCTTCTTTACTTGATCCCCAGTCACATTGGTTaGGCCAGCGATACCATAGAGCTGTGCGATGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: VQLLYLIPSHIG*ASDTIELCDAR Trigger: GCGGGCATCGCACAGCTCTATGGTATCGCTGGCTCAACCAATGTGACTGGGGATCAAGTAAAGAAGCTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092888.11 |
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| CDS CAA 90 bp | TGGAAAGTATGTCCAGCTTCTTTACTTGATCCCCAGTCACATTGGTaGAGCCAGCGATACCATAGAGCTGTGCGATGCCCGCCTGGCGCA | + |
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Preference number: 6 (lower is better) Translates to: WKVCPASLLDPQSHW*SQRYHRAVRCPPGA Trigger: TGCGCCAGGCGGGCATCGCACAGCTCTATGGTATCGCTGGCTCAACCAATGTGACTGGGGATCAAGTAAAGAAGCTGGACATACTTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092888.11 |
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| CDS CAA 72 bp | TGTCCAGCTTCTTTACTTGATCCCCAGTCACATTGGTaGAGCCAGCGATACCATAGAGCTGTGCGATGCCCG | + |
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Preference number: 6 (lower is better) Translates to: CPASLLDPQSHW*SQRYHRAVRCP Trigger: CGGGCATCGCACAGCTCTATGGTATCGCTGGCTCAACCAATGTGACTGGGGATCAAGTAAAGAAGCTGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092888.11 |
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| CDS CAA 90 bp | TCCACCATAATGAATTCTCCAATGGACGGGTCCAGCATGAAGCAGTaGACACCACAATCCATGGCAAGGACCAACATGGTGGCACTGCCA | + |
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Preference number: 6 (lower is better) Translates to: STIMNSPMDGSSMKQ*TPQSMARTNMVALP Trigger: TGGCAGTGCCACCATGTTGGTCCTTGCCATGGATTGTGGTGTCAACTGCTTCATGCTGGACCCGTCCATTGGAGAATTCATTATGGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092888.11 |
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| CDS CCA 72 bp | GTATGTCCAGCTTCTTTACTTGATCCCCAGTCACATTaGTTGAGCCAGCGATACCATAGAGCTGTGCGATGC | + |
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Preference number: 6 (lower is better) Translates to: VCPASLLDPQSH*LSQRYHRAVRC Trigger: GCATCGCACAGCTCTATGGTATCGCTGGCTCAACCAATGTGACTGGGGATCAAGTAAAGAAGCTGGACATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092888.11 |
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| CDS CAA 72 bp | ATGAATTCTCCAATGGACGGGTCCAGCATGAAGCAGTaGACACCACAATCCATGGCAAGGACCAACATGGTG | + |
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Preference number: 6 (lower is better) Translates to: MNSPMDGSSMKQ*TPQSMARTNMV Trigger: CACCATGTTGGTCCTTGCCATGGATTGTGGTGTCAACTGCTTCATGCTGGACCCGTCCATTGGAGAATTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092888.11 |
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| CDS TCA 72 bp | CATCCGGAGGGAACTTTTTCCTCTGGAGATACTCATTaGTGGCAGGGTCAAAGTCCTTGGCATAACCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: HPEGTFSSGDTH*WQGQSPWHNPH Trigger: ATGAGGGTTATGCCAAGGACTTTGACCCTGCCATCAATGAGTATCTCCAGAGGAAAAAGTTCCCTCCGGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092888.11 |
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