RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBN1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000027204

Ensembl transcript IDs: ENSMUST00000028633.13, ENSMUST00000103234.2

Found 727 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTaGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACA +
Preference number: 1 (lower is better)
Translates to: AYCTCCVMEDAVVIL*WLRLLPCPPQPQCT
Trigger: TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR TCA 90 bp GGAAGCGCGTTCCTGTGCGGAGGCTGGGAAGATAGCCCATCGGCGTaGATGGCCAACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAA +
Preference number: 1 (lower is better)
Translates to: GSAFLCGGWEDSPSA*MANLSGYSCPSFQE
Trigger: TTCCTGAAAACTGGGACATGAATATCCGCTGAGGTTGGCCATTCACGCCGATGGGCTATCTTCCCAGCCTCCGCACAGGAACGCGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR CCA 90 bp GCGCGTTCCTGTGCGGAGGCTGGGAAGATAGCCCATCGGCGTGAATaGCCAACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAA +
Preference number: 1 (lower is better)
Translates to: ARSCAEAGKIAHRRE*PTSADIHVPVFRNQ
Trigger: TTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTTGGCCATTCACGCCGATGGGCTATCTTCCCAGCCTCCGCACAGGAACGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR GCA 90 bp ATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTaGACAAGTGGGCCAGTCTCAGAGAATCCACTACCATTTGGTGTA +
Preference number: 1 (lower is better)
Translates to: ILWWLRLLPCPPQPQ*TSGPVSENPLPFGV
Trigger: TACACCAAATGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR GCA 90 bp ACTGAGAGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATaGGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCC +
Preference number: 1 (lower is better)
Translates to: TESDFGVLHMLCDGG*GGDPLVAEAASLSS
Trigger: GGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACTCTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR CCA 90 bp ACGCATGACAGGGTAGCTGAGCTACTCACGAGAAGCCTGAGAAAGTaGTTGGTTGAACTAGGATCATCACTGTACCTGGGTGTTGCCATT +
Preference number: 1 (lower is better)
Translates to: THDRVAELLTRSLRK*LVELGSSLYLGVAI
Trigger: AATGGCAACACCCAGGTACAGTGATGATCCTAGTTCAACCAACCACTTTCTCAGGCTTCTCGTGAGTAGCTCAGCTACCCTGTCATGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR CCA 90 bp GATCGACTCGGTGAACAATTGTACCATGATGTGAAGGTTCTGGCTTaGGGAAAATATAATTCTACCTGCCTAAGGTTGCTTTTTCATTTA +
Preference number: 1 (lower is better)
Translates to: DRLGEQLYHDVKVLA*GKYNSTCLRLLFHL
Trigger: TAAATGAAAAAGCAACCTTAGGCAGGTAGAATTATATTTTCCCCAAGCCAGAACCTTCACATCATGGTACAATTGTTCACCGAGTCGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR TCA 90 bp GTTCCTAACTCGTGTCTTTATTACAGTGCATCAATAAATCTATTTTaGGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTG +
Preference number: 1 (lower is better)
Translates to: VPNSCLYYSASINLF*EFTSTKQTTETYCL
Trigger: CAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAAATAGATTTATTGATGCACTGTAATAAAGACACGAGTTAGGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR CAA 90 bp GATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTaGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAA +
Preference number: 2 (lower is better)
Translates to: DGGCGGDPLVAEAAS*SSPTSVHKWASLRE
Trigger: TTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR-3UTR GCA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTGCCATTCAAGAGTGGTaGTCATTTATACAGATCGAC +
Preference number: 2 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPAIQEW*SFIQID
Trigger: GTCGATCTGTATAAATGAGCACCACTCTTGAATGGC...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR CAA 90 bp CATGACAGGGTAGCTGAGCTACTCACGAGAAGCCTGAGAAAGTGGTaGGTTGAACTAGGATCATCACTGTACCTGGGTGTTGCCATTCAA +
Preference number: 2 (lower is better)
Translates to: HDRVAELLTRSLRKW*VELGSSLYLGVAIQ
Trigger: TTGAATGGCAACACCCAGGTACAGTGATGATCCTAGTTCAACCAACCACTTTCTCAGGCTTCTCGTGAGTAGCTCAGCTACCCTGTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR CAA 90 bp ATTAACCCCTTGTTGACAGGAATGACTGAGAGTGATTTTGGCGTATaGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTG +
Preference number: 2 (lower is better)
Translates to: INPLLTGMTESDFGV*HMLCDGGCGGDPLV
Trigger: CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACTCTCAGTCATTCCTGTCAACAAGGGGTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR-3UTR CCA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCGTGAAGGTTCTGGCTTaGGGAAAATATAATTCTACC +
Preference number: 2 (lower is better)
Translates to: LSSPTSVHKWASLRESTTVKVLA*GKYNST
Trigger: GGTAGAATTATATTTTCCCCAAGCCAGAACCTTCAC...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR-3UTR CCA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGGTGAAGGTTCTGGCTTaGGGAAAATATAATTCTACC +
Preference number: 2 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVVKVLA*GKYNST
Trigger: GGTAGAATTATATTTTCCCCAAGCCAGAACCTTCAC...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR-3UTR TCA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGTACTCACGAGAAGCCTaGGAAAGTGGTTGGTTGAAC +
Preference number: 2 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGYSREA*ESGWLN
Trigger: GTTCAACCAACCACTTTCTCAGGCTTCTCGTGAGTA...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR-3UTR TCA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGTACTCACGAGAAGCCTaGGAAAGTGGTTGGTTGAAC +
Preference number: 2 (lower is better)
Translates to: FENLLAPNRQQKPTACTRYSREA*ESGWLN
Trigger: GTTCAACCAACCACTTTCTCAGGCTTCTCGTGAGTA...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR-3UTR CCA 90 bp CAGTTTTCAGGAATCAATACGCATGACAGGGTAGCTGAGCTACTCACGAGAAGCGTTGCCATTCAAGAGTaGTGCTCATTTATACAGATC +
Preference number: 2 (lower is better)
Translates to: QFSGINTHDRVAELLTRSVAIQE*CSFIQI
Trigger: GATCTGTATAAATGAGCACCACTCTTGAATGGCAAC...GCTTCTCGTGAGTAGCTCAGCTACCCTGTCATGCGTATTGATTCCTGAAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR-3UTR GCA 90 bp CAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACGCCATTCAAGAGTGGTaGTCATTTATACAGATCGAC +
Preference number: 2 (lower is better)
Translates to: QQKPTACTRRSKVSRSEDAIQEW*SFIQID
Trigger: GTCGATCTGTATAAATGAGCACCACTCTTGAATGGC...GTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR-3UTR CCA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCAGAAGCCTGAGAAAGTaGTTGGTTGAACTAGGATCA +
Preference number: 2 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSRSLRK*LVELGS
Trigger: TGATCCTAGTTCAACCAACCACTTTCTCAGGCTTCT...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR-3UTR CCA 90 bp CAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACGTTGCCATTCAAGAGTaGTGCTCATTTATACAGATC +
Preference number: 2 (lower is better)
Translates to: QQKPTACTRRSKVSRSEDVAIQE*CSFIQI
Trigger: GATCTGTATAAATGAGCACCACTCTTGAATGGCAAC...GTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR CAA 90 bp CATTCAAGAGTGGTGCTCATTTATACAGATCGACTCGGTGAACAATaGTACCATGATGTGAAGGTTCTGGCTTGGGGAAAATATAATTCT +
Preference number: 2 (lower is better)
Translates to: HSRVVLIYTDRLGEQ*YHDVKVLAWGKYNS
Trigger: AGAATTATATTTTCCCCAAGCCAGAACCTTCACATCATGGTACAATTGTTCACCGAGTCGATCTGTATAAATGAGCACCACTCTTGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR CCA 72 bp ACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTaGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCT +
Preference number: 3 (lower is better)
Translates to: TCCVMEDAVVIL*WLRLLPCPPQP
Trigger: AGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR GCA 72 bp TGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTaGACAAGTGGGCCAGTCTCAGAGAATCCACTACCA +
Preference number: 3 (lower is better)
Translates to: WLRLLPCPPQPQ*TSGPVSENPLP
Trigger: TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR GCA 72 bp GATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATaGGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCC +
Preference number: 3 (lower is better)
Translates to: DFGVLHMLCDGG*GGDPLVAEAAS
Trigger: GGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR CCA 72 bp GCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACAAGTaGGCCAGTCTCAGAGAATCCACTACCATTTGGTGT +
Preference number: 3 (lower is better)
Translates to: AASLSSPTSVHK*ASLRESTTIWC
Trigger: ACACCAAATGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR CCA 72 bp AGGGTAGCTGAGCTACTCACGAGAAGCCTGAGAAAGTaGTTGGTTGAACTAGGATCATCACTGTACCTGGGT +
Preference number: 3 (lower is better)
Translates to: RVAELLTRSLRK*LVELGSSLYLG
Trigger: ACCCAGGTACAGTGATGATCCTAGTTCAACCAACCACTTTCTCAGGCTTCTCGTGAGTAGCTCAGCTACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR-3UTR CAA 90 bp CAGTTTTCAGGAATCAATACGCATGACAGGGTAGCTGAGCTACTCACGAGAAGCCGACTCGGTGAACAATaGTACCATGATGTGAAGGTT +
Preference number: 3 (lower is better)
Translates to: QFSGINTHDRVAELLTRSRLGEQ*YHDVKV
Trigger: AACCTTCACATCATGGTACAATTGTTCACCGAGTCG...GCTTCTCGTGAGTAGCTCAGCTACCCTGTCATGCGTATTGATTCCTGAAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR-3UTR CAA 90 bp AGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGAGCCTGAGAAAGTGGTaGGTTGAACTAGGATCATCA +
Preference number: 3 (lower is better)
Translates to: SKVSRSEDQRGTVHQMEASLRKW*VELGSS
Trigger: TGATGATCCTAGTTCAACCAACCACTTTCTCAGGCT...CGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR CCA 72 bp GGATCATCACTGTACCTGGGTGTTGCCATTCAAGAGTaGTGCTCATTTATACAGATCGACTCGGTGAACAAT +
Preference number: 3 (lower is better)
Translates to: GSSLYLGVAIQE*CSFIQIDSVNN
Trigger: ATTGTTCACCGAGTCGATCTGTATAAATGAGCACCACTCTTGAATGGCAACACCCAGGTACAGTGATGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR GCA 72 bp TCATCACTGTACCTGGGTGTTGCCATTCAAGAGTGGTaGTCATTTATACAGATCGACTCGGTGAACAATTGT +
Preference number: 3 (lower is better)
Translates to: SSLYLGVAIQEW*SFIQIDSVNNC
Trigger: ACAATTGTTCACCGAGTCGATCTGTATAAATGAGCACCACTCTTGAATGGCAACACCCAGGTACAGTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR-3UTR CAA 90 bp CCCTCCAGCCTTAATCCACACAAGAACATAAAACCAAGGTGTAAACTAAAATGGCGACTCGGTGAACAATaGTACCATGATGTGAAGGTT +
Preference number: 3 (lower is better)
Translates to: PSSLNPHKNIKPRCKLKWRLGEQ*YHDVKV
Trigger: AACCTTCACATCATGGTACAATTGTTCACCGAGTCG...CCATTTTAGTTTACACCTTGGTTTTATGTTCTTGTGTGGATTAAGGCTGGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR-3UTR CAA 90 bp CCCTCCAGCCTTAATCCACACAAGAACATAAAACCAAGGTGTAAACTAAAATGGAGCCTGAGAAAGTGGTaGGTTGAACTAGGATCATCA +
Preference number: 3 (lower is better)
Translates to: PSSLNPHKNIKPRCKLKWSLRKW*VELGSS
Trigger: TGATGATCCTAGTTCAACCAACCACTTTCTCAGGCT...CCATTTTAGTTTACACCTTGGTTTTATGTTCTTGTGTGGATTAAGGCTGGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR CCA 72 bp GGTGAACAATTGTACCATGATGTGAAGGTTCTGGCTTaGGGAAAATATAATTCTACCTGCCTAAGGTTGCTT +
Preference number: 3 (lower is better)
Translates to: GEQLYHDVKVLA*GKYNSTCLRLL
Trigger: AAGCAACCTTAGGCAGGTAGAATTATATTTTCCCCAAGCCAGAACCTTCACATCATGGTACAATTGTTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR TCA 72 bp ATACAGATCGACTCGGTGAACAATTGTACCATGATGTaGAGGTTCTGGCTTGGGGAAAATATAATTCTACCT +
Preference number: 3 (lower is better)
Translates to: IQIDSVNNCTMM*RFWLGENIILP
Trigger: AGGTAGAATTATATTTTCCCCAAGCCAGAACCTTCACATCATGGTACAATTGTTCACCGAGTCGATCTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCTCGCTGCTGGCAGGTaGCTCTGGGCCGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPLAAGR*LWAASA
Trigger: GGCCGAGGCGGCCCAGAGCCACCTGCCAGCAGCGAG...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTACCCGCCAGGGGCGTTaGGGCACTGGCCATTGCCAC +
Preference number: 4 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPTRQGR*GTGHCH
Trigger: GTGGCAATGGCCAGTGCCTCAACGCCCCTGGCGGGT...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCACTCGCTGCTGGCAGGTaGCTCTGGGCCGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPLAAGR*LWAASA
Trigger: GGCCGAGGCGGCCCAGAGCCACCTGCCAGCAGCGAG...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTTGTCGTCCATCTCGCTaGTGGCAGGTGGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPCRPSR*WQVALG
Trigger: GCCCAGAGCCACCTGCCAGCAGCGAGATGGACGACA...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCCGTCCATCTCGCTGCTaGCAGGTGGCTCTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: LSSPTSVHKWASLRESTTRPSRC*QVALGR
Trigger: GCGGCCCAGAGCCACCTGCCAGCAGCGAGATGGACG...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR CAA 72 bp TGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTaGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: CGGDPLVAEAAS*SSPTSVHKWAS
Trigger: ACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTAGCTACCCAGGGTGTTaGGGCAACGCCCATTCTCAC +
Preference number: 4 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPSYPGC*GNAHSH
Trigger: GTGAGAATGGGCGTTGCCTCAACACCCTGGGTAGCT...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACAGCTGGAAGCCCTTGTTaGACTCGCAGCGGTAGCTAC +
Preference number: 4 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTAGSPC*TRSGSY
Trigger: GTAGCTACCGCTGCGAGTGCAACAAGGGCTTCCAGC...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTTATCCACACAGGTCCTaGCGTCCGGAGCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPYPHRS*RPEPPH
Trigger: ATGAGGTGGCTCCGGACGGCAGGACCTGTGTGGATA...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACAAGCTACCCTCAGTGTTaGTGCAGGTCCCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTSYPQC*CRSPRH
Trigger: GTGCCTTGGGGACCTGCAGCAACACTGAGGGTAGCT...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCTGTCGTCCATCTCGCTaGTGGCAGGTGGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LSSPTSVHKWASLRESTTCRPSR*WQVALG
Trigger: GCCCAGAGCCACCTGCCAGCAGCGAGATGGACGACA...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCAACGAAGCCGGGCCTCTaGCTCCCACAGAGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPTKPGL*LPQRVA
Trigger: TGCTACCCTCTGTGGGAGCCAGAGGCCCGGCTTCGT...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTGGCACCTTCTTCCAGTaGAGGACAGGGAGAACCCCT +
Preference number: 4 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPGTFFQ*RTGRTP
Trigger: AGGGGTTCTCCCTGTCCTCCACTGGAAGAAGGTGCC...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCGGGCAGATCTCACAGTaGGGTCCCCAGCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LSSPTSVHKWASLRESTTGQISQ*GPQPLP
Trigger: AGGGAGAGGCTGGGGACCCCACTGTGAGATCTGCCC...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CAGTTTTCAGGAATCAATACGCATGACAGGGTAGCTGAGCTACTCACGAGAAGCGCTGGCAGGTGGCTCTaGGCCGCCTCGGCCCATGCC +
Preference number: 4 (lower is better)
Translates to: QFSGINTHDRVAELLTRSAGRWL*AASAHA
Trigger: GGCATGGGCCGAGGCGGCCCAGAGCCACCTGCCAGC...GCTTCTCGTGAGTAGCTCAGCTACCCTGTCATGCGTATTGATTCCTGAAAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGCGTCCATCTCGCTGCTaGCAGGTGGCTCTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWRPSRC*QVALGR
Trigger: GCGGCCCAGAGCCACCTGCCAGCAGCGAGATGGACG...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp CCTTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTAGGCCTCTGGGGACAGTaGGTTGTCGTCCATCTCGCT +
Preference number: 4 (lower is better)
Translates to: PCPPQPQCTSGPVSENPLGLWGQ*VVVHLA
Trigger: AGCGAGATGGACGACAACTCACTGTCCCCAGAGGCC...TAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACAGACCAGACGGGCAAGTaGACATATTTGGCCTCGAGC +
Preference number: 4 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTDQTGK*TYLASS
Trigger: GCTCGAGGCCAAATATGTGCACTTGCCCGTCTGGTC...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACAAGAGCAGCGCCCGTTTaGCAGAGCTGTGTAGCAGTA +
Preference number: 4 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTRAAPV*QSCVAV
Trigger: TACTGCTACACAGCTCTGGCAAACGGGCGCTGCTCT...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACATCTGGTAGCCAGCTCTaGAGTGACAGGTGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTSGSQL*SDRCRS
Trigger: GCTCCTACACCTGTCACTGCAGAGCTGGCTACCAGA...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTTACCCTCAGTGTTGCTaGAGGTCCCCAAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPYPQCC*RSPRHR
Trigger: TCTGTGCCTTGGGGACCTGCAGCAACACTGAGGGTA...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACACGGATGCTGCAGTGTTaGATGGATCTGGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTRMLQC*MDLEPQ
Trigger: CTGTGGCTCCAGATCCATCCAACACTGCAGCATCCG...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CCTTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTAAGGAACGGGCTGAACTaGAGGAAGGGGGCCAATGGG +
Preference number: 4 (lower is better)
Translates to: PCPPQPQCTSGPVSENPLRNGLN*RKGANG
Trigger: CCCATTGGCCCCCTTCCTCCAGTTCAGCCCGTTCCT...TAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCAGGTGGCGGCCAGCGATaGGCAAGGTGCACTCTTCAT +
Preference number: 4 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPGGGQR*ARCTLH
Trigger: ATGAAGAGTGCACCTTGCCCATCGCTGGCCGCCACC...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CCTTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTAGGGGTGTTCACACACTaGCCTCGGCCACAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: PCPPQPQCTSGPVSENPLGVFTH*PRPQRS
Trigger: TGACCTCTGTGGCCGAGGCCAGTGTGTGAACACCCC...TAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGCTGGCAGGTGGCTCTaGGCCGCCTCGGCCCATGCC +
Preference number: 4 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRAGRWL*AASAHA
Trigger: GGCATGGGCCGAGGCGGCCCAGAGCCACCTGCCAGC...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGCACAGCGCCCGTCGATaGCAGTCTGCCAGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWHSARR*QSASKC
Trigger: GCACTTGCTGGCAGACTGTCATCGACGGGCGCTGTG...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp CCTTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTATCCAAGCACTCATCCTaGGTGGGGCTGGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: PCPPQPQCTSGPVSENPLSKHSS*VGLAVK
Trigger: CTTCACAGCCAGCCCCACTCAGGATGAGTGCTTGGA...TAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCAGGTTCATCAGAGTTGTaGGGGCCGGCAGGAGCTCTA +
Preference number: 4 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPGSSEL*GPAGAL
Trigger: TAGAGCTCCTGCCGGCCCTCACAACTCTGATGAACC...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACAAGCCTTCATCACACTTaGATTCAAAGTCCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTSLHHT*IQSPPG
Trigger: CCCCGGGGGACTTTGAATGCAAGTGTGATGAAGGCT...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCAGGTGGTAGCCAGGGTTaGAGGCACACTGGTACTTCC +
Preference number: 4 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPGGSQG*RHTGTS
Trigger: GGAAGTACCAGTGTGCCTGCAACCCTGGCTACCACC...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCATATCCACACAGGTCCTaGCGTCCGGAGCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPYPHRS*RPEPPH
Trigger: ATGAGGTGGCTCCGGACGGCAGGACCTGTGTGGATA...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCAAGCACACCGATTTaGGGCCACACACCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVASTPI*GHTPPS
Trigger: GGAGGGAGGTGTGTGGCCCCAAATCGGTGTGCTTGC...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGAGGAACGGGCTGAACTaGAGGAAGGGGGCCAATGGG +
Preference number: 4 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVRNGLN*RKGANG
Trigger: CCCATTGGCCCCCTTCCTCCAGTTCAGCCCGTTCCT...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACACCTCATCTGGCTCAGTaGGGCACAACTCACAAGGAT +
Preference number: 4 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTPHLAQ*GTTHKD
Trigger: ATCCTTGTGAGTTGTGCCCCACTGAGCCAGATGAGG...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCACCGGAAGTATCCTGGTaGACAGCCACACAGGTAGCC +
Preference number: 4 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPPEVSW*TATQVA
Trigger: GGCTACCTGTGTGGCTGTCCACCAGGATACTTCCGG...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCCACACCTCCCTCCGTTaGGACAGCCACTTTCACAGA +
Preference number: 4 (lower is better)
Translates to: LSSPTSVHKWASLRESTTHTSLR*DSHFHR
Trigger: TCTGTGAAAGTGGCTGTCTCAACGGAGGGAGGTGTG...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGTGCAGACAATCCCGCTaGGCTGTCCCTGGCACATCT +
Preference number: 4 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVCRQSR*AVPGTS
Trigger: AGATGTGCCAGGGACAGCTCAGCGGGATTGTCTGCA...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACACTGGACACAGACATTTaGAGCTACCCTCAGTGTTGC +
Preference number: 4 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTLDTDI*SYPQCC
Trigger: GCAACACTGAGGGTAGCTTCAAATGTCTGTGTCCAG...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGGGCCTCTGGGGACAGTaGGTTGTCGTCCATCTCGCT +
Preference number: 4 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWGLWGQ*VVVHLA
Trigger: AGCGAGATGGACGACAACTCACTGTCCCCAGAGGCC...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp CCTTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTATTCCCGGTCCACTGCTaGAGAGTGCCTGATATTCCG +
Preference number: 4 (lower is better)
Translates to: PCPPQPQCTSGPVSENPLFPVHC*RVPDIP
Trigger: CGGAATATCAGGCACTCTGCAGCAGTGGACCGGGAA...TAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCACCGTCGATGACAGTCTaGCAGCAAGTGCCCTTGATG +
Preference number: 4 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPPSMTV*QQVPLM
Trigger: CATCAAGGGCACTTGCTGGCAGACTGTCATCGACGG...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGTGGTGTTCCTGCACTTaGCGTGGGTACAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVWCSCT*RGYRGW
Trigger: CCAGCCTCTGTACCCACGGCAAGTGCAGGAACACCA...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGAGCTACCCTCAGTGTTaGTGCAGGTCCCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVSYPQC*CRSPRH
Trigger: GTGCCTTGGGGACCTGCAGCAACACTGAGGGTAGCT...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp CCTTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACATCCGTTTCGTTCGTaGTTCTCCGTTTCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: PCPPQPQCTSGPVSENPLHPFRS*FSVSGL
Trigger: GAGGCCGGAAACGGAGAAGCACGAACGAAACGGATG...TAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCGTTCCTTCCCAGCCTCCAAATTaGCGTCCGCCCCATGGCTCG +
Preference number: 4 (lower is better)
Translates to: FQDLKTNAEQSIRWKRVPSQPPN*RPPHGS
Trigger: CGAGCCATGGGGCGGACGCCAATTTGGAGGCTGGGA...AGGAACGCGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCATTCTCTTGGCCCGATTaGCTCTGGTCTCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPFSWPD*LWSPSG
Trigger: GCCTGAAGGAGACCAGAGCCAATCGGGCCAAGAGAA...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGGCAAGCACACCGATTTaGGGCCACACACCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWASTPI*GHTPPS
Trigger: GGAGGGAGGTGTGTGGCCCCAAATCGGTGTGCTTGC...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCGTGGGTACAGAGGCTaGGTATCATCTTGCACTCAT +
Preference number: 4 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPRGYRG*VSSCTH
Trigger: ATGAGTGCAAGATGATACCCAGCCTCTGTACCCACG...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACACACAGATCCCGGGCTTaGTCTGACACTCATTCTCAT +
Preference number: 4 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTHRSRA*SDTHSH
Trigger: ATGAGAATGAGTGTCAGACCAAGCCCGGGATCTGTG...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGCAGGAAGGAGATATCTaGCCAGACGGGCAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVQEGDI*PDGQVH
Trigger: GTGCACTTGCCCGTCTGGTCAGATATCTCCTTCCTG...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCCCAGGAGGAACGGGCTaGACTGGAGGAAGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRPGGTG*TGGRGP
Trigger: TGGCCCCCTTCCTCCAGTTCAGCCCGTTCCTCCTGG...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACAGTGTCTCACACTCATTaGTATCTTTGCAGTAGCGGC +
Preference number: 4 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTVSHTH*YLCSSG
Trigger: GCCGCTACTGCAAAGATATCAATGAGTGTGAGACAC...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp AGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCACAGCGCCCGTCGATaGCAGTCTGCCAGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: SKVSRSEDQRGTVHQMEAHSARR*QSASKC
Trigger: GCACTTGCTGGCAGACTGTCATCGACGGGCGCTGTG...CGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp CCTTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTAGGGGTTCCTGTTGCTTaGGCCAATCTGGCACATGTT +
Preference number: 4 (lower is better)
Translates to: PCPPQPQCTSGPVSENPLGVPVA*ANLAHV
Trigger: AACATGTGCCAGATTGGCTCAAGCAACAGGAACCCC...TAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGGGTTCATCAGAGTTGTaGGGGCCGGCAGGAGCTCTA +
Preference number: 4 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWGSSEL*GPAGAL
Trigger: TAGAGCTCCTGCCGGCCCTCACAACTCTGATGAACC...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACATACAGCGACCATTGTTaGAGATCCGGCCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTYSDHC*RSGHSE
Trigger: TTCAGAATGGCCGGATCTGCAACAATGGTCGCTGTA...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCGCCGCCTCTTCTCTTaGCCCGATTGGCTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVRRLFS*PDWLWS
Trigger: AGACCAGAGCCAATCGGGCCAAGAGAAGAGGCGGCG...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACAGCAAGTGCACATATTTaGCCTCGAGCAGAATCCATC +
Preference number: 4 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTASAHI*PRAESI
Trigger: GATGGATTCTGCTCGAGGCCAAATATGTGCACTTGC...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGATGGACTGTGGCAGCTaGTTAGAGCAGCGCCCGTTT +
Preference number: 4 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVMDCGS*LEQRPF
Trigger: AAACGGGCGCTGCTCTAACCAGCTGCCACAGTCCAT...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTTGTGCAGGACACGGCTaGCAGGGTTCCCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPCAGHG*QGSPKA
Trigger: TGCCTTTGGGGAACCCTGCCAGCCGTGTCCTGCACA...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGTTCCTGCACTTGCCGTaGGTACAGAGGCTGGGTATC +
Preference number: 4 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVFLHLP*VQRLGI
Trigger: GATACCCAGCCTCTGTACCCACGGCAAGTGCAGGAA...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCCTTCCCTCTGTGTTGTaGCAAATGCCTCCTCGACAC +
Preference number: 4 (lower is better)
Translates to: LSSPTSVHKWASLRESTTLPSVL*QMPPRH
Trigger: GTGTCGAGGAGGCATTTGCCACAACACAGAGGGAAG...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCGGGTTGCAGGCACACTaGTACTTCCCTATGAGGTTC +
Preference number: 4 (lower is better)
Translates to: LSSPTSVHKWASLRESTTGLQAH*YFPMRF
Trigger: GAACCTCATAGGGAAGTACCAGTGTGCCTGCAACCC...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCCCTTGGCACAGCCCTaGAAGCTCCTGGCACTCATC +
Preference number: 4 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVPLAQP*KLLALI
Trigger: GATGAGTGCCAGGAGCTTCCAGGGCTGTGCCAAGGG...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCCCTCATCTGGCTCAGTaGGGCACAACTCACAAGGAT +
Preference number: 4 (lower is better)
Translates to: LSSPTSVHKWASLRESTTPHLAQ*GTTHKD
Trigger: ATCCTTGTGAGTTGTGCCCCACTGAGCCAGATGAGG...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCACCACATCTTCACAGCTaGCACCACTCTGATCGAGTG +
Preference number: 4 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPPHLHS*HHSDRV
Trigger: CACTCGATCAGAGTGGTGCCAGCTGTGAAGATGTGG...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CCTTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACGTACTGGAAGCCGGTaGGACACATGCACTTGTAAC +
Preference number: 4 (lower is better)
Translates to: PCPPQPQCTSGPVSENPLRTGSR*DTCTCN
Trigger: GTTACAAGTGCATGTGTCCCACCGGCTTCCAGTACG...TAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CCTTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACTGAACTGTTCGTACTaGAAGCCGGTGGGACACATG +
Preference number: 4 (lower is better)
Translates to: PCPPQPQCTSGPVSENPLLNCSY*KPVGHM
Trigger: CATGTGTCCCACCGGCTTCCAGTACGAACAGTTCAG...TAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACACACTCATTGATGTCTTaGCAGCCTCCACTGAACTGT +
Preference number: 4 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTHSLMS*QPPLNC
Trigger: ACAGTTCAGTGGAGGCTGCCAAGACATCAATGAGTG...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp CCTTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACATTCATCCACATCTTaGCAAGCTCCAGTGCGGATG +
Preference number: 4 (lower is better)
Translates to: PCPPQPQCTSGPVSENPLHSSTS*QAPVRM
Trigger: CATCCGCACTGGAGCTTGTCAAGATGTGGATGAATG...TAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp AGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGAGGAGCCCTGGTTGTTaGTGCACTCGCCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: SKVSRSEDQRGTVHQMEARSPGC*CTRHQC
Trigger: GCACTGGTGGCGAGTGCATCAACAACCAGGGCTCCT...CGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp CCTTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTATATATCAGTGCCTGCTaGTGTCATTCCCGGTCCACT +
Preference number: 4 (lower is better)
Translates to: PCPPQPQCTSGPVSENPLYISAC*CHSRST
Trigger: AGTGGACCGGGAATGACATCAGCAGGCACTGATATA...TAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCTGTCACACCTACACTTaGAGCTGCCAATGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: LSSPTSVHKWASLRESTTCHTYT*SCQWCS
Trigger: GGAACACCATTGGCAGCTTCAAGTGTAGGTGTGACA...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCACTGGTACTTCCCTATaGGGTTCACACAACGCCCAT +
Preference number: 4 (lower is better)
Translates to: LSSPTSVHKWASLRESTTTGTSL*GSHNAH
Trigger: ATGGGCGTTGTGTGAACCTCATAGGGAAGTACCAGT...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGACCCGCCAGGGGCGTTaGGGCACTGGCCATTGCCAC +
Preference number: 4 (lower is better)
Translates to: FENLLAPNRQQKPTACTRTRQGR*GTGHCH
Trigger: GTGGCAATGGCCAGTGCCTCAACGCCCCTGGCGGGT...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCGAGTGGGGCTGGCTGTaGAGCCATCGTTACACTCAC +
Preference number: 4 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVEWGWL*SHRYTH
Trigger: GTGAGTGTAACGATGGCTTCACAGCCAGCCCCACTC...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp TTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCGTTCCTTCCAAGCACTCATCCTaGGTGGGGCTGGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: FQDLKTNAEQSIRWKRVPSKHSS*VGLAVK
Trigger: CTTCACAGCCAGCCCCACTCAGGATGAGTGCTTGGA...AGGAACGCGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGGGGGTTCCTGTTGCTTaGGCCAATCTGGCACATGTT +
Preference number: 4 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVGVPVA*ANLAHV
Trigger: AACATGTGCCAGATTGGCTCAAGCAACAGGAACCCC...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCACGCCCAGTTCACCACTaGGGTAGTCTTTGTCATATC +
Preference number: 4 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPRPVHH*GSLCHI
Trigger: GATATGACAAAGACTACCTCAGTGGTGAACTGGGCG...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCATACCGGGAGTTGGAATaGAGCGCCCATTTTGACAGA +
Preference number: 4 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPYRELE*SAHFDR
Trigger: TCTGTCAAAATGGGCGCTGCATTCCAACTCCCGGTA...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGTGCCAATGGTGTTCCTaGACTTGCCGTGGGTACAGA +
Preference number: 4 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVCQWCS*TCRGYR
Trigger: TCTGTACCCACGGCAAGTGCAGGAACACCATTGGCA...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp CCTTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTATGCATACAGCATGTCTaGCACAGTTGTGTGCTCCGA +
Preference number: 4 (lower is better)
Translates to: PCPPQPQCTSGPVSENPLCIQHV*HSCVLR
Trigger: TCGGAGCACACAACTGTGGCAGACATGCTGTATGCA...TAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCCCTCATAGCCTTCATTaGACCTGCACTGAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: LSSPTSVHKWASLRESTTPHSLH*TCTERS
Trigger: GCTCCTTTCAGTGCAGGTGCAATGAAGGCTATGAGG...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTAGCCAGTTTTACAGATaGAGTGATAGGACCCTCTGT +
Preference number: 4 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPSQFYR*SDRTLC
Trigger: ACAGAGGGTCCTATCACTGCATCTGTAAAACTGGCT...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACAACTCATTGTTATCAATaGAGGCAGTGTGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTTHCYQ*RQCDAG
Trigger: CCCAGCATCACACTGCCTGCATTGATAACAATGAGT...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCCGCTGAGCTGTCCCTaGCACATCTGGTTGCTTACC +
Preference number: 4 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPPLSCP*HIWLLT
Trigger: GGTAAGCAACCAGATGTGCCAGGGACAGCTCAGCGG...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CCTTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTATCCTTGACACATCCCTaGGATGGCCTGACATTCATC +
Preference number: 4 (lower is better)
Translates to: PCPPQPQCTSGPVSENPLSLTHP*DGLTFI
Trigger: GATGAATGTCAGGCCATCCCAGGGATGTGTCAAGGA...TAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCCGCAGACTCCAGGAATaGTGCTGCACTCGTCAATAT +
Preference number: 4 (lower is better)
Translates to: LSSPTSVHKWASLRESTTRRLQE*CCTRQY
Trigger: ATATTGACGAGTGCAGCACCATTCCTGGAGTCTGCG...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CCTTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTATTTGGTTATGGACTGTaGCAGCTGGTTAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: PCPPQPQCTSGPVSENPLFGYGL*QLVRAA
Trigger: CGCTGCTCTAACCAGCTGCCACAGTCCATAACCAAA...TAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGAGCCCTGGAAGCTCCTaGCACTCATCGATGTCTTCC +
Preference number: 4 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWSPGSS*HSSMSS
Trigger: GGAAGACATCGATGAGTGCCAGGAGCTTCCAGGGCT...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCAGTGAGAACCCCCGTTaGCATTCACAGGTGAAGCTT +
Preference number: 4 (lower is better)
Translates to: LSSPTSVHKWASLRESTTSENPR*HSQVKL
Trigger: AAGCTTCACCTGTGAATGCCAACGGGGGTTCTCACT...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGGCCAGCAAGTGCCCTTaGTGGTTTCTATGCAGATGG +
Preference number: 4 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWASKCP*WFLCRW
Trigger: CCATCTGCATAGAAACCATCAAGGGCACTTGCTGGC...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTTTGGGGACAATTGGTaGCCAGGAGGACATTCGCAG +
Preference number: 4 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWFGDNW*PGGHSQ
Trigger: CTGCGAATGTCCTCCTGGTCACCAATTGTCCCCAAA...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCATCAGCTCACACTCGTTaGTGTCAATGCATGCAGAGA +
Preference number: 4 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPSAHTR*CQCMQR
Trigger: TCTCTGCATGCATTGACATCAACGAGTGTGAGCTGA...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCTCAGCTCACACTCGTTaGTGTCAATGCATGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LSSPTSVHKWASLRESTTSAHTR*CQCMQR
Trigger: TCTCTGCATGCATTGACATCAACGAGTGTGAGCTGA...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTGAGCCATCCAGGTTCTaGCAGGTTCCAGGTGCACAT +
Preference number: 4 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPEPSRF*QVPGAH
Trigger: ATGTGCACCTGGAACCTGTCAGAACCTGGATGGCTC...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp AGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGAGCTACCCAGGGTGTTaGGGCAACGCCCATTCTCAC +
Preference number: 4 (lower is better)
Translates to: SKVSRSEDQRGTVHQMEASYPGC*GNAHSH
Trigger: GTGAGAATGGGCGTTGCCTCAACACCCTGGGTAGCT...CGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp AGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGGAGTGGGGCTGGCTGTaGAGCCATCGTTACACTCAC +
Preference number: 4 (lower is better)
Translates to: SKVSRSEDQRGTVHQMEAEWGWL*SHRYTH
Trigger: GTGAGTGTAACGATGGCTTCACAGCCAGCCCCACTC...CGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp CAGTTTTCAGGAATCAATACGCATGACAGGGTAGCTGAGCTACTCACGAGAAGCAGCACTCGGACTTGGTaGCGGGGTTCCTGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: QFSGINTHDRVAELLTRSSTRTW*RGSCCL
Trigger: CAAGCAACAGGAACCCCGTCACCAAGTCCGAGTGCT...GCTTCTCGTGAGTAGCTCAGCTACCCTGTCATGCGTATTGATTCCTGAAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGATGAGCCACACTCATTaGTGTCTTGGCAGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWMSHTH*CLGSLH
Trigger: GTGGAGGCTGCCAAGACATCAATGAGTGTGGCTCAT...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCCATCTACGCATCTGGTaGCATCAGGAGAGGTGTAAA +
Preference number: 4 (lower is better)
Translates to: LSSPTSVHKWASLRESTTHLRIW*HQERCK
Trigger: TTTACACCTCTCCTGATGGCACCAGATGCGTAGATG...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGTACCGGGAGTTGGAATaGAGCGCCCATTTTGACAGA +
Preference number: 4 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVYRELE*SAHFDR
Trigger: TCTGTCAAAATGGGCGCTGCATTCCAACTCCCGGTA...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGTCATTCCCGGTCCACTaGTGCAGAGTGCCTGATATT +
Preference number: 4 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVSFPVH*CRVPDI
Trigger: AATATCAGGCACTCTGCAGCAGTGGACCGGGAATGA...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGTCCCGTCAGAGTTTGTaGAGAAGGTCTCACAACCAC +
Preference number: 4 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVSRQSL*RRSHNH
Trigger: GTGGTTGTGAGACCTTCTGCACAAACTCTGACGGGA...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCTCCAATTTCATTGCTaGAGGCTGTATCTCCATTGT +
Preference number: 4 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPLQFHC*RLYLHC
Trigger: ACAATGGAGATACAGCCTGCAGCAATGAAATTGGAG...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCAACTCCAATTTCATTaGTGCAGGCTGTATCTCCAT +
Preference number: 4 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPQLQFH*CRLYLH
Trigger: ATGGAGATACAGCCTGCAGCAATGAAATTGGAGTTG...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCGTTCCTAGCCTTCATTGCACCTaGACTGAAAGGAGCCCACGG +
Preference number: 4 (lower is better)
Translates to: FQDLKTNAEQSIRWKRVPSLHCT*TERSPR
Trigger: CCGTGGGCTCCTTTCAGTGCAGGTGCAATGAAGGCT...AGGAACGCGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCACCCAGGCGGGCAAATaGATCTGTAGGAGCCATCCA +
Preference number: 4 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVTQAGK*ICRSHP
Trigger: TGGATGGCTCCTACAGATGCATTTGCCCGCCTGGGT...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCCGTTTCGTTCGTaGTTCTCCGTTTCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVHPFRS*FSVSGL
Trigger: GAGGCCGGAAACGGAGAAGCACGAACGAAACGGATG...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTTTCTCTTGGCCCGATTaGCTCTGGTCTCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPFSWPD*LWSPSG
Trigger: GCCTGAAGGAGACCAGAGCCAATCGGGCCAAGAGAA...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGCCGATGTACCCTTTCTaGCACAGACAGTGGTCATCG +
Preference number: 4 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWPMYPF*HRQWSS
Trigger: CGATGACCACTGTCTGTGCCAGAAAGGGTACATCGG...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTATGGACTGTGGCAGCTaGTTAGAGCAGCGCCCGTTT +
Preference number: 4 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPMDCGS*LEQRPF
Trigger: AAACGGGCGCTGCTCTAACCAGCTGCCACAGTCCAT...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCAAGGGGGCCAATGGGTaGGGGAGGATATTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVKGANG*GRIFWS
Trigger: AGACCAGAATATCCTCCCCCACCCATTGGCCCCCTT...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCAGGCATACTCAGTGCTaGCACAACAGCATTCCGATT +
Preference number: 4 (lower is better)
Translates to: LSSPTSVHKWASLRESTTRHTQC*HNSIPI
Trigger: AATCGGAATGCTGTTGTGCCAGCACTGAGTATGCCT...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGGGGGTGTTCACACACTaGCCTCGGCCACAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGGVFTH*PRPQRS
Trigger: TGACCTCTGTGGCCGAGGCCAGTGTGTGAACACCCC...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGGGGTTGCAGGCACACTaGTACTTCCCTATGAGGTTC +
Preference number: 4 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWGLQAH*YFPMRF
Trigger: GAACCTCATAGGGAAGTACCAGTGTGCCTGCAACCC...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGGGCGTTGAGGCACTaGCCATTGCCACAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRGALRH*PLPQRF
Trigger: GAACCTCTGTGGCAATGGCCAGTGCCTCAACGCCCC...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCCTTCCCGTCAGCACTaGGCACGAAGCCCATGTCGC +
Preference number: 4 (lower is better)
Translates to: QQKPTACTRRSKVSRSEDPSRQH*ARSPCR
Trigger: GCGACATGGGCTTCGTGCCCAGTGCTGACGGGAAGG...GTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCACGAAGCCGGGCCTCTaGCTCCCACAGAGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSTKPGL*LPQRVA
Trigger: TGCTACCCTCTGTGGGAGCCAGAGGCCCGGCTTCGT...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACAGCTTGGAATGGTTTCTaGATTTGGGTGATGAACACT +
Preference number: 4 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTAWNGF*IWVMNT
Trigger: AGTGTTCATCACCCAAATCCAGAAACCATTCCAAGC...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGACAGGTGAAGCTTCCTaGAGTGTTCTGGCAAACACC +
Preference number: 4 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVTGEAS*SVLANT
Trigger: GGTGTTTGCCAGAACACTCCAGGAAGCTTCACCTGT...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CAGTTTTCAGGAATCAATACGCATGACAGGGTAGCTGAGCTACTCACGAGAAGCCCGGAAGTATCCTGGTaGACAGCCACACAGGTAGCC +
Preference number: 4 (lower is better)
Translates to: QFSGINTHDRVAELLTRSPEVSW*TATQVA
Trigger: GGCTACCTGTGTGGCTGTCCACCAGGATACTTCCGG...GCTTCTCGTGAGTAGCTCAGCTACCCTGTCATGCGTATTGATTCCTGAAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CCTTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTATTTCCGGCCTCGTTTTaGGTAGCCGTTGATCTTACA +
Preference number: 4 (lower is better)
Translates to: PCPPQPQCTSGPVSENPLFPASF*VAVDLT
Trigger: TGTAAGATCAACGGCTACCCAAAACGAGGCCGGAAA...TAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCAGGAGCCCTGGTTGTTaGTGCACTCGCCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSRSPGC*CTRHQC
Trigger: GCACTGGTGGCGAGTGCATCAACAACCAGGGCTCCT...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGTCTTTCCGTCCCGCGTaGCATGAAAGCCCGCATTGC +
Preference number: 4 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGSFRPA*HESPHC
Trigger: GCAATGCGGGCTTTCATGTCACGCGGGACGGAAAGA...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGCTGCTGCAGAGTGCCTaGTATTCCGCTGAATTCTGT +
Preference number: 4 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWLLQSA*YSAEFC
Trigger: ACAGAATTCAGCGGAATATCAGGCACTCTGCAGCAG...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACACGTGCCTTTAATTCTTaGGAACCCTTTACCACAAAT +
Preference number: 4 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTRAFNS*EPFTTN
Trigger: ATTTGTGGTAAAGGGTTCTCAAGAATTAAAGGCACG...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCATCAGGTCACACTCATTaGCATCCACACAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPSGHTH*HPHKSS
Trigger: TGAAGACTTGTGTGGATGTCAATGAGTGTGACCTGA...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTTTTTCCTTTCTTCCCTaGATATCCCATATCACAGTG +
Preference number: 4 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPFSFLP*ISHITV
Trigger: CACTGTGATATGGGATATTCAGGGAAGAAAGGAAAA...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCAGATCCACATTTGTTTTaGAGCCAGTGTGACAAAGGC +
Preference number: 4 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPDPHLF*SQCDKG
Trigger: GCCTTTGTCACACTGGCTTCAAAACAAATGTGGATC...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCAATGCAGTCATTGTTGTaGGACAGTATGAAGCCATGG +
Preference number: 4 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPMQSLL*DSMKPW
Trigger: CCATGGCTTCATACTGTCTCACAACAATGACTGCAT...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp TTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCGTTCCTTCATTGCACCTGCACTaGAAGGAGCCCACGGTATTG +
Preference number: 4 (lower is better)
Translates to: FQDLKTNAEQSIRWKRVPSLHLH*KEPTVL
Trigger: CAATACCGTGGGCTCCTTTCAGTGCAGGTGCAATGA...AGGAACGCGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGAGCACTCGGACTTGGTaGCGGGGTTCCTGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGSTRTW*RGSCCL
Trigger: CAAGCAACAGGAACCCCGTCACCAAGTCCGAGTGCT...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTTTTCGGCAAACATCATaGATAACCTTGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPFRQTS*ITLHSS
Trigger: TGATGAGTGCAAGGTTATTCATGATGTTTGCCGAAA...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGCGCCCAGTTCACCACTaGGGTAGTCTTTGTCATATC +
Preference number: 4 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWRPVHH*GSLCHI
Trigger: GATATGACAAAGACTACCTCAGTGGTGAACTGGGCG...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGAGAGCAGCGCCCGTTTaGCAGAGCTGTGTAGCAGTA +
Preference number: 4 (lower is better)
Translates to: SKVSRSEDQRGTVHQMEARAAPV*QSCVAV
Trigger: TACTGCTACACAGCTCTGGCAAACGGGCGCTGCTCT...CGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCGTTCCTTGCACTCGCCACCAGTaGATGGGTTCTTCTCACACT +
Preference number: 4 (lower is better)
Translates to: FQDLKTNAEQSIRWKRVPCTRHQ*MGSSHT
Trigger: AGTGTGAGAAGAACCCATGCACTGGTGGCGAGTGCA...AGGAACGCGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTTGCACTCGCCACCAGTaGATGGGTTCTTCTCACACT +
Preference number: 4 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPCTRHQ*MGSSHT
Trigger: AGTGTGAGAAGAACCCATGCACTGGTGGCGAGTGCA...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGTGGTGTTCCTGCACTTaGCGTGGGTACAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGWCSCT*RGYRGW
Trigger: CCAGCCTCTGTACCCACGGCAAGTGCAGGAACACCA...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCTTCCCACGGTGTCGATaGACTGGCCATGACTGCATA +
Preference number: 4 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVFPRCR*TGHDCI
Trigger: TATGCAGTCATGGCCAGTGCATCGACACCGTGGGAA...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGGCACAGCAGCACTCCTaGTTGGAATGGTTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWAQQHS*LEWFLD
Trigger: ATCCAGAAACCATTCCAAGCAGGAGTGCTGCTGTGC...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCTTCTGGCACAGACAGTaGTCATCGCTGCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRFWHRQ*SSLQLP
Trigger: GGGCAGCTGCAGCGATGACCACTGTCTGTGCCAGAA...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACATACCACAGTAAAACATaGGCCTGTTCTGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTYHSKT*ACSVIS
Trigger: AGAGATTACAGAACAGGCCCATGTTTTACTGTGGTA...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGAGGCTCGGCCCACGGTaGCACAGCAAAGTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGRLGPR*HSKVFW
Trigger: CCAAAACACTTTGCTGTGCCACCGTGGGCCGAGCCT...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGCGCAGACTCCAGGAATaGTGCTGCACTCGTCAATAT +
Preference number: 4 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWRRLQE*CCTRQY
Trigger: ATATTGACGAGTGCAGCACCATTCCTGGAGTCTGCG...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTTTGGTTATGGACTGTaGCAGCTGGTTAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWFGYGL*QLVRAA
Trigger: CGCTGCTCTAACCAGCTGCCACAGTCCATAACCAAA...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTTGGGGGAGGATATTCTaGTCTCCCGGGAATTACCAG +
Preference number: 4 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPWGRIF*SPGNYQ
Trigger: CTGGTAATTCCCGGGAGACCAGAATATCCTCCCCCA...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CCTTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTAGCAGATGGTTTTTGTTaGGTCCAGAGTACTTTCAGG +
Preference number: 4 (lower is better)
Translates to: PCPPQPQCTSGPVSENPLADGFC*VQSTFR
Trigger: CCTGAAAGTACTCTGGACCCAACAAAAACCATCTGC...TAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCGCAGATGGTTTTTGTTaGGTCCAGAGTACTTTCAGG +
Preference number: 4 (lower is better)
Translates to: LSSPTSVHKWASLRESTTADGFC*VQSTFR
Trigger: CCTGAAAGTACTCTGGACCCAACAAAAACCATCTGC...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGAGAGCCTGTCATGAGTaGGGTGGTAGCCAGGGTTGC +
Preference number: 4 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGRACHE*GGSQGC
Trigger: GCAACCCTGGCTACCACCCCACTCATGACAGGCTCT...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCCCTTGGCACAGCCCTaGAAGCTCCTGGCACTCATC +
Preference number: 4 (lower is better)
Translates to: QQKPTACTRRSKVSRSEDPLAQP*KLLALI
Trigger: GATGAGTGCCAGGAGCTTCCAGGGCTGTGCCAAGGG...GTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGGTTGGACAGCGACACTaGAAGCTGCCAAAGGTATTG +
Preference number: 4 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWVGQRH*KLPKVL
Trigger: CAATACCTTTGGCAGCTTCCAGTGTCGCTGTCCAAC...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGCTCATTCGCAAATCTTaGCACCTTCTTCCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVLIRKS*HLLPVE
Trigger: CTCCACTGGAAGAAGGTGCCAAGATTTGCGAATGAG...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCTTGCTTGAGCCAATCTaGCACATGTTTTGCAAGACC +
Preference number: 4 (lower is better)
Translates to: LSSPTSVHKWASLRESTTLLEPI*HMFCKT
Trigger: GGTCTTGCAAAACATGTGCCAGATTGGCTCAAGCAA...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGACAGGTGAAGCTTCCTaGAGTGTTCTGGCAAACACC +
Preference number: 4 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWTGEAS*SVLANT
Trigger: GGTGTTTGCCAGAACACTCCAGGAAGCTTCACCTGT...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCCACATCTTCACAGCTaGCACCACTCTGATCGAGTG +
Preference number: 4 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPPHLHS*HHSDRV
Trigger: CACTCGATCAGAGTGGTGCCAGCTGTGAAGATGTGG...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCTGCAGACAATCCCGCTaGGCTGTCCCTGGCACATCT +
Preference number: 4 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSCRQSR*AVPGTS
Trigger: AGATGTGCCAGGGACAGCTCAGCGGGATTGTCTGCA...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp ACTGAGTACTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAACCAGGAGGAACGGGCTaGACTGGAGGAAGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: TEYLAIWFLTRVFITVHQPGGTG*TGGRGP
Trigger: TGGCCCCCTTCCTCCAGTTCAGCCCGTTCCTCCTGG...TTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAGTACTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGCTGCAGAGTGCCTaGTATTCCGCTGAATTCTGT +
Preference number: 4 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPLLQSA*YSAEFC
Trigger: ACAGAATTCAGCGGAATATCAGGCACTCTGCAGCAG...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCTATATCAGTGCCTGCTaGTGTCATTCCCGGTCCACT +
Preference number: 4 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVYISAC*CHSRST
Trigger: AGTGGACCGGGAATGACATCAGCAGGCACTGATATA...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCAAGGAGAGGATCTCTCTaGCATTCATCAATATCCATG +
Preference number: 4 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPRRGSL*HSSISM
Trigger: CATGGATATTGATGAATGTCAGAGAGATCCTCTCCT...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCACTGGTACTTCCCTATaGGGTTCACACAACGCCCAT +
Preference number: 4 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVTGTSL*GSHNAH
Trigger: ATGGGCGTTGTGTGAACCTCATAGGGAAGTACCAGT...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCGTCCATATCAACTGCTaGGTCATCAGGGCCCACAAT +
Preference number: 4 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVVHINC*VIRAHN
Trigger: ATTGTGGGCCCTGATGACTCAGCAGTTGATATGGAC...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCATCCCGGGCTTGGTCTaGCACTCATTCTCATCTATG +
Preference number: 4 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVIPGLV*HSFSSM
Trigger: CATAGATGAGAATGAGTGTCAGACCAAGCCCGGGAT...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCATTAACACACAGGAACTaGCAGTTATGCTGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPLTHRN*QLCCLV
Trigger: AACCAAGCAGCATAACTGTCAGTTCCTGTGTGTTAA...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCGGTCATCGCTGCAGCTaGCCCCATTCATACAGCGGA +
Preference number: 4 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSGHRCS*PHSYSG
Trigger: TCCGCTGTATGAATGGGGGCAGCTGCAGCGATGACC...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGAGACTCCAGGAATGGTaGTGCACTCGTCAATATCTT +
Preference number: 4 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVRLQEW*CTRQYL
Trigger: AAGATATTGACGAGTGCAGCACCATTCCTGGAGTCT...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCAGATCGCAACAGCACTaGATTTTGGTTATGGACTGT +
Preference number: 4 (lower is better)
Translates to: LSSPTSVHKWASLRESTTRSQQH*ILVMDC
Trigger: ACAGTCCATAACCAAAATGCAGTGCTGTTGCGATCT...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCAAAGGCATACTCAGTaGTGGCACAACAGCATTCCG +
Preference number: 4 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVQRHTQ*WHNSIP
Trigger: CGGAATGCTGTTGTGCCAGCACTGAGTATGCCTTTG...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGTTCCCGGTCCACTGCTaGAGAGTGCCTGATATTCCG +
Preference number: 4 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGFPVHC*RVPDIP
Trigger: CGGAATATCAGGCACTCTGCAGCAGTGGACCGGGAA...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCACTCCAATTTCATTGCTaGAGGCTGTATCTCCATTGT +
Preference number: 4 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPLQFHC*RLYLHC
Trigger: ACAATGGAGATACAGCCTGCAGCAATGAAATTGGAG...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGTACCCTCAGTGTTGCTaGAGGTCCCCAAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGYPQCC*RSPRHR
Trigger: TCTGTGCCTTGGGGACCTGCAGCAACACTGAGGGTA...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp CCTTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTATCTGTGTTAATGCACTaGCCATGTCTACAGACATCA +
Preference number: 4 (lower is better)
Translates to: PCPPQPQCTSGPVSENPLSVLMH*PCLQTS
Trigger: TGATGTCTGTAGACATGGGCAGTGCATTAACACAGA...TAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTTCTTGTAAGCCACTGTaGCCTCGAAAGGGCAGATCT +
Preference number: 4 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPSCKPL*PRKGRS
Trigger: AGATCTGCCCTTTCGAGGGCACAGTGGCTTACAAGA...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGGTTTGGGAGCCTGGTTaGATTCATTCAGATCTACAC +
Preference number: 4 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVVWEPG*IHSDLH
Trigger: GTGTAGATCTGAATGAATGCAACCAGGCTCCCAAAC...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCGTTATGCTGCTTGGTTaGACACTCGTCAAGATCTTT +
Preference number: 4 (lower is better)
Translates to: LSSPTSVHKWASLRESTTVMLLG*TLVKIF
Trigger: AAAGATCTTGACGAGTGTGCAACCAAGCAGCATAAC...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTTCCTCCACAGACATGTaGACTCAGGCACTCGTTTTC +
Preference number: 4 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPSSTDM*TQALVF
Trigger: GAAAACGAGTGCCTGAGTGCACATGTCTGTGGAGGA...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CCCTCCAGCCTTAATCCACACAAGAACATAAAACCAAGGTGTAAACTAAAATGGTCCCAGCCTCCAAATTaGCGTCCGCCCCATGGCTCG +
Preference number: 4 (lower is better)
Translates to: PSSLNPHKNIKPRCKLKWSQPPN*RPPHGS
Trigger: CGAGCCATGGGGCGGACGCCAATTTGGAGGCTGGGA...CCATTTTAGTTTACACCTTGGTTTTATGTTCTTGTGTGGATTAAGGCTGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCAAGGAATGCCGGCAAATaGGAACAATACACTGATTTC +
Preference number: 4 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPRNAGK*EQYTDF
Trigger: GAAATCAGTGTATTGTTCCCATTTGCCGGCATTCCT...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACTTCTGGCACAGACAGTaGTCATCGCTGCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QQKPTACTRRSKVSRSEDFWHRQ*SSLQLP
Trigger: GGGCAGCTGCAGCGATGACCACTGTCTGTGCCAGAA...GTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCCCGCTGAGCTGTCCCTaGCACATCTGGTTGCTTACC +
Preference number: 4 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSPLSCP*HIWLLT
Trigger: GGTAAGCAACCAGATGTGCCAGGGACAGCTCAGCGG...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACAGGCTCGGCCCACGGTaGCACAGCAAAGTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: QQKPTACTRRSKVSRSEDRLGPR*HSKVFW
Trigger: CCAAAACACTTTGCTGTGCCACCGTGGGCCGAGCCT...GTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCTCCTTGACACATCCCTaGGATGGCCTGACATTCATC +
Preference number: 4 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVSLTHP*DGLTFI
Trigger: GATGAATGTCAGGCCATCCCAGGGATGTGTCAAGGA...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGTGGGGGAGGATATTCTaGTCTCCCGGGAATTACCAG +
Preference number: 4 (lower is better)
Translates to: SKVSRSEDQRGTVHQMEAWGRIF*SPGNYQ
Trigger: CTGGTAATTCCCGGGAGACCAGAATATCCTCCCCCA...CGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGCCACGGATATCCAGCTaGAAGCCCTTGTTGCACTCG +
Preference number: 4 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGPRISS*KPLLHS
Trigger: CGAGTGCAACAAGGGCTTCCAGCTGGATATCCGTGG...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGTGTGCAGGACACGGCTaGCAGGGTTCCCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: FENLLAPNRQQKPTACTRCAGHG*QGSPKA
Trigger: TGCCTTTGGGGAACCCTGCCAGCCGTGTCCTGCACA...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCTATCCCATATCACAGTaGCAGATGAACGAGCCTTTA +
Preference number: 4 (lower is better)
Translates to: LSSPTSVHKWASLRESTTYPISQ*QMNEPL
Trigger: TAAAGGCTCGTTCATCTGCCACTGTGATATGGGATA...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCATATCCCATATCACAGTaGCAGATGAACGAGCCTTTA +
Preference number: 4 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPYPISQ*QMNEPL
Trigger: TAAAGGCTCGTTCATCTGCCACTGTGATATGGGATA...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGGGGGCGTTGAGGCACTaGCCATTGCCACAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: FENLLAPNRQQKPTACTRGALRH*PLPQRF
Trigger: GAACCTCTGTGGCAATGGCCAGTGCCTCAACGCCCC...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CCCTCCAGCCTTAATCCACACAAGAACATAAAACCAAGGTGTAAACTAAAATGGCCTTCCCGTCAGCACTaGGCACGAAGCCCATGTCGC +
Preference number: 4 (lower is better)
Translates to: PSSLNPHKNIKPRCKLKWPSRQH*ARSPCR
Trigger: GCGACATGGGCTTCGTGCCCAGTGCTGACGGGAAGG...CCATTTTAGTTTACACCTTGGTTTTATGTTCTTGTGTGGATTAAGGCTGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGAGGCCCGGGAGGTTGTaGCAAGTTCCAAAGACACAG +
Preference number: 4 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGRPGRL*QVPKTQ
Trigger: CTGTGTCTTTGGAACTTGCCACAACCTCCCGGGCCT...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCGTTCCTGTTGGACAGCGACACTaGAAGCTGCCAAAGGTATTG +
Preference number: 4 (lower is better)
Translates to: FQDLKTNAEQSIRWKRVPVGQRH*KLPKVL
Trigger: CAATACCTTTGGCAGCTTCCAGTGTCGCTGTCCAAC...AGGAACGCGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CAGTTTTCAGGAATCAATACGCATGACAGGGTAGCTGAGCTACTCACGAGAAGCCATCTGTGCTTGGGATaGGGCACTGTTCACAGGGTT +
Preference number: 4 (lower is better)
Translates to: QFSGINTHDRVAELLTRSHLCLG*GTVHRV
Trigger: AACCCTGTGAACAGTGCCCCATCCCAAGCACAGATG...GCTTCTCGTGAGTAGCTCAGCTACCCTGTCATGCGTATTGATTCCTGAAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCAATGGTTTCTGGATTTaGGTGATGAACACTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LSSPTSVHKWASLRESTTNGFWI*VMNTSH
Trigger: GTGGGAAGTGTTCATCACCCAAATCCAGAAACCATT...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGCACTCCTGCTTGGAATaGTTTCTGGATTTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVHSCLE*FLDLGD
Trigger: ATCACCCAAATCCAGAAACCATTCCAAGCAGGAGTG...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CCCTCCAGCCTTAATCCACACAAGAACATAAAACCAAGGTGTAAACTAAAATGGGGGCAGATCTCACAGTaGGGTCCCCAGCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: PSSLNPHKNIKPRCKLKWGQISQ*GPQPLP
Trigger: AGGGAGAGGCTGGGGACCCCACTGTGAGATCTGCCC...CCATTTTAGTTTACACCTTGGTTTTATGTTCTTGTGTGGATTAAGGCTGGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CAGTTTTCAGGAATCAATACGCATGACAGGGTAGCTGAGCTACTCACGAGAAGCCGTACTGGAAGCCGGTaGGACACATGCACTTGTAAC +
Preference number: 4 (lower is better)
Translates to: QFSGINTHDRVAELLTRSRTGSR*DTCTCN
Trigger: GTTACAAGTGCATGTGTCCCACCGGCTTCCAGTACG...GCTTCTCGTGAGTAGCTCAGCTACCCTGTCATGCGTATTGATTCCTGAAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCTGAACTGTTCGTACTaGAAGCCGGTGGGACACATG +
Preference number: 4 (lower is better)
Translates to: SKVSRSEDQRGTVHQMEALNCSY*KPVGHM
Trigger: CATGTGTCCCACCGGCTTCCAGTACGAACAGTTCAG...CGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTTATCCGGAAGTATCCTaGTGGACAGCCACACAGGTA +
Preference number: 4 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPYPEVS*WTATQV
Trigger: TACCTGTGTGGCTGTCCACCAGGATACTTCCGGATA...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGTCTTTCCGTCCCGCGTaGCATGAAAGCCCGCATTGC +
Preference number: 4 (lower is better)
Translates to: FENLLAPNRQQKPTACTRSFRPA*HESPHC
Trigger: GCAATGCGGGCTTTCATGTCACGCGGGACGGAAAGA...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCGTGTCTCACACTCATTaGTATCTTTGCAGTAGCGGC +
Preference number: 4 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVVSHTH*YLCSSG
Trigger: GCCGCTACTGCAAAGATATCAATGAGTGTGAGACAC...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp AGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGTGTCACACCTACACTTaGAGCTGCCAATGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: SKVSRSEDQRGTVHQMEACHTYT*SCQWCS
Trigger: GGAACACCATTGGCAGCTTCAAGTGTAGGTGTGACA...CGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCTTTGGGGACAATTGGTaGCCAGGAGGACATTCGCAG +
Preference number: 4 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRFGDNW*PGGHSQ
Trigger: CTGCGAATGTCCTCCTGGTCACCAATTGTCCCCAAA...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp AGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCCAAGCTTTACCCAGTaGACAACAGCAGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: SKVSRSEDQRGTVHQMEAPSFTQ*TTAGSL
Trigger: AAGGCTTCCTGCTGTTGTTCACTGGGTAAAGCTTGG...CGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTAGCTGCCAACCATGTTaGTGCACACTCCATTTTCAC +
Preference number: 4 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPSCQPC*CTLHFH
Trigger: GTGAAAATGGAGTGTGCATCAACATGGTTGGCAGCT...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGAGCTGCCTGCAGTGTTaGTGCATTCCGCATTTCGCT +
Preference number: 4 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGSCLQC*CIPHFA
Trigger: AGCGAAATGCGGAATGCATCAACACTGCAGGCAGCT...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCATCTAAGCACATGGTCTaGTCCACATTTGTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPSKHMV*STFVLK
Trigger: CTTCAAAACAAATGTGGATCAGACCATGTGCTTAGA...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGTCATTGCACCTGCACTaGAAGGAGCCCACGGTATTG +
Preference number: 4 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGSLHLH*KEPTVL
Trigger: CAATACCGTGGGCTCCTTTCAGTGCAGGTGCAATGA...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCTTTCGGCAAACATCATaGATAACCTTGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: LSSPTSVHKWASLRESTTFRQTS*ITLHSS
Trigger: TGATGAGTGCAAGGTTATTCATGATGTTTGCCGAAA...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGATGAGCCACACTCATTaGTGTCTTGGCAGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGMSHTH*CLGSLH
Trigger: GTGGAGGCTGCCAAGACATCAATGAGTGTGGCTCAT...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp CAGTTTTCAGGAATCAATACGCATGACAGGGTAGCTGAGCTACTCACGAGAAGCCCATCCCCACAGGAATaGCGGCAAATGGGAACAATA +
Preference number: 4 (lower is better)
Translates to: QFSGINTHDRVAELLTRSPSPQE*RQMGTI
Trigger: TATTGTTCCCATTTGCCGGCATTCCTGTGGGGATGG...GCTTCTCGTGAGTAGCTCAGCTACCCTGTCATGCGTATTGATTCCTGAAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp CAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACGACCAGACGGGCAAGTaGACATATTTGGCCTCGAGC +
Preference number: 4 (lower is better)
Translates to: QQKPTACTRRSKVSRSEDDQTGK*TYLASS
Trigger: GCTCGAGGCCAAATATGTGCACTTGCCCGTCTGGTC...GTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCGTTCCTCATTCATACAGCGGATaGTGCAGTGTTGGATGGATC +
Preference number: 4 (lower is better)
Translates to: FQDLKTNAEQSIRWKRVPHSYSG*CSVGWI
Trigger: GATCCATCCAACACTGCAGCATCCGCTGTATGAATG...AGGAACGCGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGGGTCATCGCTGCAGCTaGCCCCATTCATACAGCGGA +
Preference number: 4 (lower is better)
Translates to: FENLLAPNRQQKPTACTRGHRCS*PHSYSG
Trigger: TCCGCTGTATGAATGGGGGCAGCTGCAGCGATGACC...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCCATGAAAGCCCGCATTaGATACGCAGTGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRHESPH*IRSGSC
Trigger: GCAGCTTCCACTGCGTATGCAATGCGGGCTTTCATG...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGACATGTTTCGGATGCTaGACTCATCCATATCTTCAC +
Preference number: 4 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVTCFGC*THPYLH
Trigger: GTGAAGATATGGATGAGTGCAGCATCCGAAACATGT...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTTTGATATCTTCACATTaGGTGCCTTTAATTCTTGAG +
Preference number: 4 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPLISSH*VPLILE
Trigger: CTCAAGAATTAAAGGCACGCAATGTGAAGATATCAA...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCTGCCAATGGTGTTCCTaGACTTGCCGTGGGTACAGA +
Preference number: 4 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRCQWCS*TCRGYR
Trigger: TCTGTACCCACGGCAAGTGCAGGAACACCATTGGCA...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGCCCCAGGTATGTTTGTaGACTGGCCACCATCACAGA +
Preference number: 4 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGPQVCL*TGHHHR
Trigger: TCTGTGATGGTGGCCAGTGCACAAACATACCTGGGG...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCAGCCTTCATTGCACCTaGACTGAAAGGAGCCCACGG +
Preference number: 4 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSSLHCT*TERSPR
Trigger: CCGTGGGCTCCTTTCAGTGCAGGTGCAATGAAGGCT...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGGGCCGCCTCGGCCCATaGCCATTCCAGAAACACAAT +
Preference number: 4 (lower is better)
Translates to: FENLLAPNRQQKPTACTRGRLGP*PFQKHN
Trigger: ATTGTGTTTCTGGAATGGGCATGGGCCGAGGCGGCC...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCCGGATGCTGCAGTGTTaGATGGATCTGGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSRMLQC*MDLEPQ
Trigger: CTGTGGCTCCAGATCCATCCAACACTGCAGCATCCG...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAGGGGGCCAATGGGTaGGGGAGGATATTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSKGANG*GRIFWS
Trigger: AGACCAGAATATCCTCCCCCACCCATTGGCCCCCTT...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCCTTCCCTCTGTGTTGTaGCAAATGCCTCCTCGACAC +
Preference number: 4 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRLPSVL*QMPPRH
Trigger: GTGTCGAGGAGGCATTTGCCACAACACAGAGGGAAG...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGGACAGTATGAAGCCATaGTTACAGCGACAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWDSMKP*LQRQLK
Trigger: CTTCAACTGTCGCTGTAACCATGGCTTCATACTGTC...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGACGGTATTGACACACTaGCCATTTCTGCAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWTVLTH*PFLQRF
Trigger: GAACCTTTGCAGAAATGGCCAGTGTGTCAATACCGT...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGGGCACCTTCTTCCAGTaGAGGACAGGGAGAACCCCT +
Preference number: 4 (lower is better)
Translates to: FENLLAPNRQQKPTACTRGTFFQ*RTGRTP
Trigger: AGGGGTTCTCCCTGTCCTCCACTGGAAGAAGGTGCC...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCTCATTCGCAAATCTTaGCACCTTCTTCCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVLIRKS*HLLPVE
Trigger: CTCCACTGGAAGAAGGTGCCAAGATTTGCGAATGAG...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCAGCAGCACTCCTGCTTaGAATGGTTTCTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVSSTPA*NGFWIW
Trigger: CCAAATCCAGAAACCATTCCAAGCAGGAGTGCTGCT...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCGTTCCTTTTCCGGCCTCGTTTTaGGTAGCCGTTGATCTTACA +
Preference number: 4 (lower is better)
Translates to: FQDLKTNAEQSIRWKRVPFPASF*VAVDLT
Trigger: TGTAAGATCAACGGCTACCCAAAACGAGGCCGGAAA...AGGAACGCGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCCTGACCCCTTCTTTCTaGTTGATTTTAAAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LSSPTSVHKWASLRESTTLTPSF*LILKKP
Trigger: TGGCTTCTTTAAAATCAACCAGAAAGAAGGGGTCAG...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR CAA 72 bp GTAGCTGAGCTACTCACGAGAAGCCTGAGAAAGTGGTaGGTTGAACTAGGATCATCACTGTACCTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: VAELLTRSLRKW*VELGSSLYLGV
Trigger: AACACCCAGGTACAGTGATGATCCTAGTTCAACCAACCACTTTCTCAGGCTTCTCGTGAGTAGCTCAGCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp AGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGGTTGAAATCCTCAGTTaGCCTGATGGGACACATCTC +
Preference number: 4 (lower is better)
Translates to: SKVSRSEDQRGTVHQMEAVEILS*PDGTHL
Trigger: GAGATGTGTCCCATCAGGTCAACTGAGGATTTCAAC...CGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCCCAAGCTTTACCCAGTaGACAACAGCAGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRPSFTQ*TTAGSL
Trigger: AAGGCTTCCTGCTGTTGTTCACTGGGTAAAGCTTGG...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp CAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACAGCTGCCTGCAGTGTTaGTGCATTCCGCATTTCGCT +
Preference number: 4 (lower is better)
Translates to: QQKPTACTRRSKVSRSEDSCLQC*CIPHFA
Trigger: AGCGAAATGCGGAATGCATCAACACTGCAGGCAGCT...GTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGGAGCCATCCAGGTTCTaGCAGGTTCCAGGTGCACAT +
Preference number: 4 (lower is better)
Translates to: FENLLAPNRQQKPTACTREPSRF*QVPGAH
Trigger: ATGTGCACCTGGAACCTGTCAGAACCTGGATGGCTC...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTTAACACACAGGAACTaGCAGTTATGCTGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWLTHRN*QLCCLV
Trigger: AACCAAGCAGCATAACTGTCAGTTCCTGTGTGTTAA...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCAGACTCCAGGAATGGTaGTGCACTCGTCAATATCTT +
Preference number: 4 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVRLQEW*CTRQYL
Trigger: AAGATATTGACGAGTGCAGCACCATTCCTGGAGTCT...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGTACAGCGACCATTGTTaGAGATCCGGCCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: SKVSRSEDQRGTVHQMEAYSDHC*RSGHSE
Trigger: TTCAGAATGGCCGGATCTGCAACAATGGTCGCTGTA...CGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCCATGAAAGCCCGCATTaGATACGCAGTGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSHESPH*IRSGSC
Trigger: GCAGCTTCCACTGCGTATGCAATGCGGGCTTTCATG...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGTCATTCCCGGTCCACTaGTGCAGAGTGCCTGATATT +
Preference number: 4 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGSFPVH*CRVPDI
Trigger: AATATCAGGCACTCTGCAGCAGTGGACCGGGAATGA...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCATCCTTTGGGGCAGGTaGAGACAAAACTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRILWGR*RQNFQV
Trigger: CACCTGGAAGTTTTGTCTGCACCTGCCCCAAAGGAT...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCTCCCGGCTGTATTTGTaGATACAGCATGTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRSRLYL*IQHVCH
Trigger: GTGGCAGACATGCTGTATGCACAAATACAGCCGGGA...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCACTCATTCTCATCTATaGAGCCCTCTCCATCGGGTC +
Preference number: 4 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRTHSHL*SPLHRV
Trigger: GACCCGATGGAGAGGGCTGCATAGATGAGAATGAGT...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTAGCCAGTTTTACAGATaGAGTGATAGGACCCTCTGT +
Preference number: 4 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPSQFYR*SDRTLC
Trigger: ACAGAGGGTCCTATCACTGCATCTGTAAAACTGGCT...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCGTTTGGGAGCCTGGTTaGATTCATTCAGATCTACAC +
Preference number: 4 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVVWEPG*IHSDLH
Trigger: GTGTAGATCTGAATGAATGCAACCAGGCTCCCAAAC...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCACTCGTCAAGATCTTTaGAGCTCCTTCCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVTRQDL*SSFHPL
Trigger: AAGAGGATGGAAGGAGCTGCAAAGATCTTGACGAGT...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CAGTTTTCAGGAATCAATACGCATGACAGGGTAGCTGAGCTACTCACGAGAAGCGCAAGTGCACATATTTaGCCTCGAGCAGAATCCATC +
Preference number: 4 (lower is better)
Translates to: QFSGINTHDRVAELLTRSASAHI*PRAESI
Trigger: GATGGATTCTGCTCGAGGCCAAATATGTGCACTTGC...GCTTCTCGTGAGTAGCTCAGCTACCCTGTCATGCGTATTGATTCCTGAAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CAGTTTTCAGGAATCAATACGCATGACAGGGTAGCTGAGCTACTCACGAGAAGCAGTGTTGGATGGATCTaGAGCCACAGGAAGGAGATA +
Preference number: 4 (lower is better)
Translates to: QFSGINTHDRVAELLTRSSVGWI*SHRKEI
Trigger: TATCTCCTTCCTGTGGCTCCAGATCCATCCAACACT...GCTTCTCGTGAGTAGCTCAGCTACCCTGTCATGCGTATTGATTCCTGAAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTTGTCCCTGGCACATCTaGTTGCTTACCACAGTAAAA +
Preference number: 4 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPCPWHI*LLTTVK
Trigger: TTTTACTGTGGTAAGCAACCAGATGTGCCAGGGACA...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCGTTCCTAACAGCACTGCATTTTaGTTATGGACTGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: FQDLKTNAEQSIRWKRVPNSTAF*LWTVAA
Trigger: AGCTGCCACAGTCCATAACCAAAATGCAGTGCTGTT...AGGAACGCGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCCATCTGATGCCAGTTaGAACCCAGGTTTGCAAATA +
Preference number: 4 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPPSDAS*NPGLQI
Trigger: TATTTGCAAACCTGGGTTCCAACTGGCATCAGATGG...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGGTTTCTATGCAGATaGTTTTTGTTGGGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWWFLCR*FLLGPE
Trigger: CTCTGGACCCAACAAAAACCATCTGCATAGAAACCA...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp ACTGAGTACTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAAGGTGGCGGCCAGCGATaGGCAAGGTGCACTCTTCAT +
Preference number: 4 (lower is better)
Translates to: TEYLAIWFLTRVFITVHQGGGQR*ARCTLH
Trigger: ATGAAGAGTGCACCTTGCCCATCGCTGGCCGCCACC...TTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAGTACTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGGCATGCAGAGATGTTTaGGGACAATTGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGACRDV*GQLVTR
Trigger: CCTGGTCACCAATTGTCCCCAAACATCTCTGCATGC...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCGTTCCTTGTTGGCTGCACATGTaGGTTCCATTAGAGCATTCA +
Preference number: 4 (lower is better)
Translates to: FQDLKTNAEQSIRWKRVPCWLHM*VPLEHS
Trigger: TGAATGCTCTAATGGAACCCACATGTGCAGCCAACA...AGGAACGCGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGCCCTGGAAGCTCCTaGCACTCATCGATGTCTTCC +
Preference number: 4 (lower is better)
Translates to: FENLLAPNRQQKPTACTRSPGSS*HSSMSS
Trigger: GGAAGACATCGATGAGTGCCAGGAGCTTCCAGGGCT...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CAGTTTTCAGGAATCAATACGCATGACAGGGTAGCTGAGCTACTCACGAGAAGCCAGGGTTTGGGAGCCTaGTTGCATTCATTCAGATCT +
Preference number: 4 (lower is better)
Translates to: QFSGINTHDRVAELLTRSQGLGA*LHSFRS
Trigger: AGATCTGAATGAATGCAACCAGGCTCCCAAACCCTG...GCTTCTCGTGAGTAGCTCAGCTACCCTGTCATGCGTATTGATTCCTGAAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCACTCATTGATGTCTTaGCAGCCTCCACTGAACTGT +
Preference number: 4 (lower is better)
Translates to: SKVSRSEDQRGTVHQMEAHSLMS*QPPLNC
Trigger: ACAGTTCAGTGGAGGCTGCCAAGACATCAATGAGTG...CGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGAGCTGCCAACCATGTTaGTGCACACTCCATTTTCAC +
Preference number: 4 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGSCQPC*CTLHFH
Trigger: GTGAAAATGGAGTGTGCATCAACATGGTTGGCAGCT...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp AGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGATGCAGTCATTGTTGTaGGACAGTATGAAGCCATGG +
Preference number: 4 (lower is better)
Translates to: SKVSRSEDQRGTVHQMEAMQSLL*DSMKPW
Trigger: CCATGGCTTCATACTGTCTCACAACAATGACTGCAT...CGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp CAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACGTCCATATCAACTGCTaGGTCATCAGGGCCCACAAT +
Preference number: 4 (lower is better)
Translates to: QQKPTACTRRSKVSRSEDVHINC*VIRAHN
Trigger: ATTGTGGGCCCTGATGACTCAGCAGTTGATATGGAC...GTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCCCATCCCCACAGGAATaGCGGCAAATGGGAACAATA +
Preference number: 4 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSPSPQE*RQMGTI
Trigger: TATTGTTCCCATTTGCCGGCATTCCTGTGGGGATGG...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp CAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACGTCCAGCAGGGCATTTaGACTCAAAAGATCCAACGG +
Preference number: 4 (lower is better)
Translates to: QQKPTACTRRSKVSRSEDVQQGI*TQKIQR
Trigger: CCGTTGGATCTTTTGAGTGCAAATGCCCTGCTGGAC...GTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp ACTGAGTACTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAAGCTGGAAGCCCTTGTTaGACTCGCAGCGGTAGCTAC +
Preference number: 4 (lower is better)
Translates to: TEYLAIWFLTRVFITVHQAGSPC*TRSGSY
Trigger: GTAGCTACCGCTGCGAGTGCAACAAGGGCTTCCAGC...TTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAGTACTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCGTTCCTGTTGATGTCAATGCATaGAGAGATGTTTGGGGACAA +
Preference number: 4 (lower is better)
Translates to: FQDLKTNAEQSIRWKRVPVDVNA*RDVWGQ
Trigger: TTGTCCCCAAACATCTCTGCATGCATTGACATCAAC...AGGAACGCGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp CAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACTCCCGTCAGAGTTTGTaGAGAAGGTCTCACAACCAC +
Preference number: 4 (lower is better)
Translates to: QQKPTACTRRSKVSRSEDSRQSL*RRSHNH
Trigger: GTGGTTGTGAGACCTTCTGCACAAACTCTGACGGGA...GTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCTTCATGTCTTCAGATaGCATGAACCCATCATAGCA +
Preference number: 4 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVLHVFR*HEPIIA
Trigger: TGCTATGATGGGTTCATGGCATCTGAAGACATGAAG...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTTCTTCTCATGTCCATaGAATTATTTCCCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWFFSCP*NYFPRS
Trigger: TGAACGGGGGAAATAATTGCATGGACATGAGAAGAA...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCCCTCATAGCCTTCATTaGACCTGCACTGAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSPHSLH*TCTERS
Trigger: GCTCCTTTCAGTGCAGGTGCAATGAAGGCTATGAGG...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGCTGACAGGTTCCAGGTaGACATTTCCCAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: FENLLAPNRQQKPTACTRLTGSR*TFPRIQ
Trigger: CTGGATCCTGGGAAATGTGCACCTGGAACCTGTCAG...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGAGACATCAGGTTCTTTaGATTCGTCCATATCAACTG +
Preference number: 4 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWRHQVL*IRPYQL
Trigger: CAGTTGATATGGACGAATGCAAAGAACCTGATGTCT...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp ACTGAGTACTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAAGGCCGCCTCGGCCCATaGCCATTCCAGAAACACAAT +
Preference number: 4 (lower is better)
Translates to: TEYLAIWFLTRVFITVHQGRLGP*PFQKHN
Trigger: ATTGTGTTTCTGGAATGGGCATGGGCCGAGGCGGCC...TTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAGTACTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGTGCTGCAGTGTTGGATaGATCTGGAGCCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: FENLLAPNRQQKPTACTRCCSVG*IWSHRK
Trigger: CTTCCTGTGGCTCCAGATCCATCCAACACTGCAGCA...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACGCATGCAGAGATGTTTaGGGACAATTGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: QQKPTACTRRSKVSRSEDACRDV*GQLVTR
Trigger: CCTGGTCACCAATTGTCCCCAAACATCTCTGCATGC...GTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CCCTCCAGCCTTAATCCACACAAGAACATAAAACCAAGGTGTAAACTAAAATGGAGGCCCGGGAGGTTGTaGCAAGTTCCAAAGACACAG +
Preference number: 4 (lower is better)
Translates to: PSSLNPHKNIKPRCKLKWRPGRL*QVPKTQ
Trigger: CTGTGTCTTTGGAACTTGCCACAACCTCCCGGGCCT...CCATTTTAGTTTACACCTTGGTTTTATGTTCTTGTGTGGATTAAGGCTGGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCACTTGCATGTAGTCTaGAGGACAAATGCAGGTATA +
Preference number: 4 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPHLHVV*RTNAGI
Trigger: TATACCTGCATTTGTCCTCCAGACTACATGCAAGTG...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGCATCTGTGCTTGGGATaGGGCACTGTTCACAGGGTT +
Preference number: 4 (lower is better)
Translates to: FENLLAPNRQQKPTACTRHLCLG*GTVHRV
Trigger: AACCCTGTGAACAGTGCCCCATCCCAAGCACAGATG...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CAGTTTTCAGGAATCAATACGCATGACAGGGTAGCTGAGCTACTCACGAGAAGCCAAGGCACAGATTTCTaGCTCTTCAACACACTCATC +
Preference number: 4 (lower is better)
Translates to: QFSGINTHDRVAELLTRSQGTDF*LFNTLI
Trigger: GATGAGTGTGTTGAAGAGCCAGAAATCTGTGCCTTG...GCTTCTCGTGAGTAGCTCAGCTACCCTGTCATGCGTATTGATTCCTGAAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCCAGGGAGAACCCCTCTaGACACAGACATTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSQGEPL*TQTFEA
Trigger: AGCTTCAAATGTCTGTGTCCAGAGGGGTTCTCCCTG...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAGGGAGAACCCCTCTaGACACAGACATTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: QQKPTACTRRSKVSRSEDQGEPL*TQTFEA
Trigger: AGCTTCAAATGTCTGTGTCCAGAGGGGTTCTCCCTG...GTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CAGTTTTCAGGAATCAATACGCATGACAGGGTAGCTGAGCTACTCACGAGAAGCCACTCCTGCTTGGAATaGTTTCTGGATTTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: QFSGINTHDRVAELLTRSHSCLE*FLDLGD
Trigger: ATCACCCAAATCCAGAAACCATTCCAAGCAGGAGTG...GCTTCTCGTGAGTAGCTCAGCTACCCTGTCATGCGTATTGATTCCTGAAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGAGCAGCACTCCTGCTTaGAATGGTTTCTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGSSTPA*NGFWIW
Trigger: CCAAATCCAGAAACCATTCCAAGCAGGAGTGCTGCT...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCCACAGATCCCGGGCTTaGTCTGACACTCATTCTCAT +
Preference number: 4 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSHRSRA*SDTHSH
Trigger: ATGAGAATGAGTGTCAGACCAAGCCCGGGATCTGTG...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CAGTTTTCAGGAATCAATACGCATGACAGGGTAGCTGAGCTACTCACGAGAAGCTTGCTTGAGCCAATCTaGCACATGTTTTGCAAGACC +
Preference number: 4 (lower is better)
Translates to: QFSGINTHDRVAELLTRSLLEPI*HMFCKT
Trigger: GGTCTTGCAAAACATGTGCCAGATTGGCTCAAGCAA...GCTTCTCGTGAGTAGCTCAGCTACCCTGTCATGCGTATTGATTCCTGAAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGATCAAGTATCTGTTGTaGTTCATCAGAGTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWIKYLL*FIRVVR
Trigger: CCTCACAACTCTGATGAACCACAACAGATACTTGAT...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp AGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGATGGGAACAATACACTaGTTTCCACCAGGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: SKVSRSEDQRGTVHQMEAMGTIH*FPPGKV
Trigger: AACCTTACCTGGTGGAAATCAGTGTATTGTTCCCAT...CGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp CAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACTGCAGAAGTAGCTGCTaGCAGTGTTTGTACATTCCC +
Preference number: 4 (lower is better)
Translates to: QQKPTACTRRSKVSRSEDCRSSC*QCLYIP
Trigger: GGGAATGTACAAACACTGTCAGCAGCTACTTCTGCA...GTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp CAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACGTTGAAATCCTCAGTTaGCCTGATGGGACACATCTC +
Preference number: 4 (lower is better)
Translates to: QQKPTACTRRSKVSRSEDVEILS*PDGTHL
Trigger: GAGATGTGTCCCATCAGGTCAACTGAGGATTTCAAC...GTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCGTGCCTTTAATTCTTaGGAACCCTTTACCACAAAT +
Preference number: 4 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVRAFNS*EPFTTN
Trigger: ATTTGTGGTAAAGGGTTCTCAAGAATTAAAGGCACG...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp CAGTTTTCAGGAATCAATACGCATGACAGGGTAGCTGAGCTACTCACGAGAAGCAGGAGAGGATCTCTCTaGCATTCATCAATATCCATG +
Preference number: 4 (lower is better)
Translates to: QFSGINTHDRVAELLTRSRRGSL*HSSISM
Trigger: CATGGATATTGATGAATGTCAGAGAGATCCTCTCCT...GCTTCTCGTGAGTAGCTCAGCTACCCTGTCATGCGTATTGATTCCTGAAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGAGATCGCAACAGCACTaGATTTTGGTTATGGACTGT +
Preference number: 4 (lower is better)
Translates to: SKVSRSEDQRGTVHQMEARSQQH*ILVMDC
Trigger: ACAGTCCATAACCAAAATGCAGTGCTGTTGCGATCT...CGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp ACTGAGTACTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATCTGGTAGCCAGCTCTaGAGTGACAGGTGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: TEYLAIWFLTRVFITVHQSGSQL*SDRCRS
Trigger: GCTCCTACACCTGTCACTGCAGAGCTGGCTACCAGA...TTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAGTACTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGCACATGTTTCGGATaGTGCACTCATCCATATCTT +
Preference number: 4 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRGTCFG*CTHPYL
Trigger: AAGATATGGATGAGTGCAGCATCCGAAACATGTGCC...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCTTCATATCCCGAGTTaGATATACATTTGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVLHIPS*IYICRS
Trigger: GGACCTACAAATGTATATGCAACTCGGGATATGAAG...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp ACTGAGTACTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAACCGTCGATGACAGTCTaGCAGCAAGTGCCCTTGATG +
Preference number: 4 (lower is better)
Translates to: TEYLAIWFLTRVFITVHQPSMTV*QQVPLM
Trigger: CATCAAGGGCACTTGCTGGCAGACTGTCATCGACGG...TTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAGTACTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp CAGTTTTCAGGAATCAATACGCATGACAGGGTAGCTGAGCTACTCACGAGAAGCCTTCATGTCTTCAGATaGCATGAACCCATCATAGCA +
Preference number: 4 (lower is better)
Translates to: QFSGINTHDRVAELLTRSLHVFR*HEPIIA
Trigger: TGCTATGATGGGTTCATGGCATCTGAAGACATGAAG...GCTTCTCGTGAGTAGCTCAGCTACCCTGTCATGCGTATTGATTCCTGAAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGTCCCGGCTGTATTTGTaGATACAGCATGTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: FENLLAPNRQQKPTACTRSRLYL*IQHVCH
Trigger: GTGGCAGACATGCTGTATGCACAAATACAGCCGGGA...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp CAGTTTTCAGGAATCAATACGCATGACAGGGTAGCTGAGCTACTCACGAGAAGCAAATGCAGGTATAGTTaGCAACGGTGTTGTAACAGG +
Preference number: 4 (lower is better)
Translates to: QFSGINTHDRVAELLTRSKCRYS*QRCCNR
Trigger: CCTGTTACAACACCGTTGGCAACTATACCTGCATTT...GCTTCTCGTGAGTAGCTCAGCTACCCTGTCATGCGTATTGATTCCTGAAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp ACTGAGTACTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAAACCCAGGCGGGCAAATaGATCTGTAGGAGCCATCCA +
Preference number: 4 (lower is better)
Translates to: TEYLAIWFLTRVFITVHQTQAGK*ICRSHP
Trigger: TGGATGGCTCCTACAGATGCATTTGCCCGCCTGGGT...TTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAGTACTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGTCCTCCACAGACATGTaGACTCAGGCACTCGTTTTC +
Preference number: 4 (lower is better)
Translates to: FENLLAPNRQQKPTACTRSSTDM*TQALVF
Trigger: GAAAACGAGTGCCTGAGTGCACATGTCTGTGGAGGA...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGTGTCCCTGGCACATCTaGTTGCTTACCACAGTAAAA +
Preference number: 4 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGCPWHI*LLTTVK
Trigger: TTTTACTGTGGTAAGCAACCAGATGTGCCAGGGACA...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCAGGCATACTCAGTGCTaGCACAACAGCATTCCGATT +
Preference number: 4 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSRHTQC*HNSIPI
Trigger: AATCGGAATGCTGTTGTGCCAGCACTGAGTATGCCT...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCTGTACACAAATCCTTTaGGGCAGGTGCAGACAAAAC +
Preference number: 4 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRCTQIL*GRCRQN
Trigger: GTTTTGTCTGCACCTGCCCCAAAGGATTTGTGTACA...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp ACTGAGTACTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATTCCTGCACTTGCCGTaGGTACAGAGGCTGGGTATC +
Preference number: 4 (lower is better)
Translates to: TEYLAIWFLTRVFITVHQFLHLP*VQRLGI
Trigger: GATACCCAGCCTCTGTACCCACGGCAAGTGCAGGAA...TTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAGTACTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCTGTTGGCTGCACATGTaGGTTCCATTAGAGCATTCA +
Preference number: 4 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRCWLHM*VPLEHS
Trigger: TGAATGCTCTAATGGAACCCACATGTGCAGCCAACA...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGACAGTATGAAGCCATaGTTACAGCGACAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRDSMKP*LQRQLK
Trigger: CTTCAACTGTCGCTGTAACCATGGCTTCATACTGTC...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCCAGGGTTTGGGAGCCTaGTTGCATTCATTCAGATCT +
Preference number: 4 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSQGLGA*LHSFRS
Trigger: AGATCTGAATGAATGCAACCAGGCTCCCAAACCCTG...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGTGAGAACCCCCGTTaGCATTCACAGGTGAAGCTT +
Preference number: 4 (lower is better)
Translates to: FENLLAPNRQQKPTACTRSENPR*HSQVKL
Trigger: AAGCTTCACCTGTGAATGCCAACGGGGGTTCTCACT...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGTATCCGGAAGTATCCTaGTGGACAGCCACACAGGTA +
Preference number: 4 (lower is better)
Translates to: FENLLAPNRQQKPTACTRYPEVS*WTATQV
Trigger: TACCTGTGTGGCTGTCCACCAGGATACTTCCGGATA...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCGTATGCATTATAACGTaGTCCACAGACATTGGGTCC +
Preference number: 4 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSVCIIT*STDIGS
Trigger: GGACCCAATGTCTGTGGATCACGTTATAATGCATAC...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGGAGAACATTCACAAATaGAGGAGCCAGGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: FENLLAPNRQQKPTACTRENIHK*RSQGCS
Trigger: AGAACAGCCCTGGCTCCTTCATTTGTGAATGTTCTC...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCACATGTTTCGGATGCTaGACTCATCCATATCTTCAC +
Preference number: 4 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRTCFGC*THPYLH
Trigger: GTGAAGATATGGATGAGTGCAGCATCCGAAACATGT...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCTTCATATCCCGAGTTaGATATACATTTGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: SKVSRSEDQRGTVHQMEALHIPS*IYICRS
Trigger: GGACCTACAAATGTATATGCAACTCGGGATATGAAG...CGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp CCCTCCAGCCTTAATCCACACAAGAACATAAAACCAAGGTGTAAACTAAAATGGATCCTTTGGGGCAGGTaGAGACAAAACTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PSSLNPHKNIKPRCKLKWILWGR*RQNFQV
Trigger: CACCTGGAAGTTTTGTCTGCACCTGCCCCAAAGGAT...CCATTTTAGTTTACACCTTGGTTTTATGTTCTTGTGTGGATTAAGGCTGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp CTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATAAATCTAGGTGGTAGCCAGGGTTaGAGGCACACTGGTACTTCC +
Preference number: 4 (lower is better)
Translates to: LGNLVPNSCLYYSASINLGGSQG*RHTGTS
Trigger: GGAAGTACCAGTGTGCCTGCAACCCTGGCTACCACC...TAGATTTATTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp CAGTTTTCAGGAATCAATACGCATGACAGGGTAGCTGAGCTACTCACGAGAAGCTTCTTCTCATGTCCATaGAATTATTTCCCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: QFSGINTHDRVAELLTRSFFSCP*NYFPRS
Trigger: TGAACGGGGGAAATAATTGCATGGACATGAGAAGAA...GCTTCTCGTGAGTAGCTCAGCTACCCTGTCATGCGTATTGATTCCTGAAAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTACTCATCAACATCTATaGAGTCATTGTTGTGAGACA +
Preference number: 4 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPTHQHL*SHCCET
Trigger: TGTCTCACAACAATGACTGCATAGATGTTGATGAGT...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp CAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACATCTGGCACATGTTTTaGAAGACCTCCGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: QQKPTACTRRSKVSRSEDIWHMF*KTSEKQ
Trigger: CTGCTTTTCGGAGGTCTTGCAAAACATGTGCCAGAT...GTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGTGTTGGATGGATCTaGAGCCACAGGAAGGAGATA +
Preference number: 4 (lower is better)
Translates to: FENLLAPNRQQKPTACTRSVGWI*SHRKEI
Trigger: TATCTCCTTCCTGTGGCTCCAGATCCATCCAACACT...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CAGTTTTCAGGAATCAATACGCATGACAGGGTAGCTGAGCTACTCACGAGAAGCTACCACAGTAAAACATaGGCCTGTTCTGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: QFSGINTHDRVAELLTRSYHSKT*ACSVIS
Trigger: AGAGATTACAGAACAGGCCCATGTTTTACTGTGGTA...GCTTCTCGTGAGTAGCTCAGCTACCCTGTCATGCGTATTGATTCCTGAAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCCCATCTGATGCCAGTTaGAACCCAGGTTTGCAAATA +
Preference number: 4 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSPSDAS*NPGLQI
Trigger: TATTTGCAAACCTGGGTTCCAACTGGCATCAGATGG...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCTGTACACAAATCCTTTaGGGCAGGTGCAGACAAAAC +
Preference number: 4 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSCTQIL*GRCRQN
Trigger: GTTTTGTCTGCACCTGCCCCAAAGGATTTGTGTACA...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CCCTCCAGCCTTAATCCACACAAGAACATAAAACCAAGGTGTAAACTAAAATGGCGTGGGTACAGAGGCTaGGTATCATCTTGCACTCAT +
Preference number: 4 (lower is better)
Translates to: PSSLNPHKNIKPRCKLKWRGYRG*VSSCTH
Trigger: ATGAGTGCAAGATGATACCCAGCCTCTGTACCCACG...CCATTTTAGTTTACACCTTGGTTTTATGTTCTTGTGTGGATTAAGGCTGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATAAATCTAAGAGCCTGTCATGAGTaGGGTGGTAGCCAGGGTTGC +
Preference number: 4 (lower is better)
Translates to: LGNLVPNSCLYYSASINLRACHE*GGSQGC
Trigger: GCAACCCTGGCTACCACCCCACTCATGACAGGCTCT...TAGATTTATTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCAATGGTTTCTGGATTTaGGTGATGAACACTTCCCAC +
Preference number: 4 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRNGFWI*VMNTSH
Trigger: GTGGGAAGTGTTCATCACCCAAATCCAGAAACCATT...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
3UTR CAA 72 bp GTGGTGCTCATTTATACAGATCGACTCGGTGAACAATaGTACCATGATGTGAAGGTTCTGGCTTGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: VVLIYTDRLGEQ*YHDVKVLAWGK
Trigger: TTTTCCCCAAGCCAGAACCTTCACATCATGGTACAATTGTTCACCGAGTCGATCTGTATAAATGAGCACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp CAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACATGGGAACAATACACTaGTTTCCACCAGGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: QQKPTACTRRSKVSRSEDMGTIH*FPPGKV
Trigger: AACCTTACCTGGTGGAAATCAGTGTATTGTTCCCAT...GTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp ACTGAGTACTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAACATTCATCCACATCTTaGCAAGCTCCAGTGCGGATG +
Preference number: 4 (lower is better)
Translates to: TEYLAIWFLTRVFITVHQHSSTS*QAPVRM
Trigger: CATCCGCACTGGAGCTTGTCAAGATGTGGATGAATG...TTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAGTACTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGTCAGGTCACACTCATTaGCATCCACACAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: FENLLAPNRQQKPTACTRSGHTH*HPHKSS
Trigger: TGAAGACTTGTGTGGATGTCAATGAGTGTGACCTGA...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCTCTAAGCACATGGTCTaGTCCACATTTGTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRSKHMV*STFVLK
Trigger: CTTCAAAACAAATGTGGATCAGACCATGTGCTTAGA...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGGGCACATGTTTCGGATaGTGCACTCATCCATATCTT +
Preference number: 4 (lower is better)
Translates to: FENLLAPNRQQKPTACTRGTCFG*CTHPYL
Trigger: AAGATATGGATGAGTGCAGCATCCGAAACATGTGCC...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCGTTGATGTCAATGCATaGAGAGATGTTTGGGGACAA +
Preference number: 4 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSVDVNA*RDVWGQ
Trigger: TTGTCCCCAAACATCTCTGCATGCATTGACATCAAC...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp ACTGAGTACTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATGCATACAGCATGTCTaGCACAGTTGTGTGCTCCGA +
Preference number: 4 (lower is better)
Translates to: TEYLAIWFLTRVFITVHQCIQHV*HSCVLR
Trigger: TCGGAGCACACAACTGTGGCAGACATGCTGTATGCA...TTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAGTACTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAATGCAGGTATAGTTaGCAACGGTGTTGTAACAGG +
Preference number: 4 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSKCRYS*QRCCNR
Trigger: CCTGTTACAACACCGTTGGCAACTATACCTGCATTT...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp CAGTTTTCAGGAATCAATACGCATGACAGGGTAGCTGAGCTACTCACGAGAAGCACTCATCAACATCTATaGAGTCATTGTTGTGAGACA +
Preference number: 4 (lower is better)
Translates to: QFSGINTHDRVAELLTRSTHQHL*SHCCET
Trigger: TGTCTCACAACAATGACTGCATAGATGTTGATGAGT...GCTTCTCGTGAGTAGCTCAGCTACCCTGTCATGCGTATTGATTCCTGAAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp ACTGAGTACTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAAGCACAGCAGCACTCCTaGTTGGAATGGTTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: TEYLAIWFLTRVFITVHQAQQHS*LEWFLD
Trigger: ATCCAGAAACCATTCCAAGCAGGAGTGCTGCTGTGC...TTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAGTACTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCTTCTTACACTCCATTTaGTTCTCAGTACAGTCGTGT +
Preference number: 4 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRFLHSI*FSVQSC
Trigger: ACACGACTGTACTGAGAAGCAAATGGAGTGTAAGAA...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp ACTGAGTACTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAAACTCATTCTCATCTATaGAGCCCTCTCCATCGGGTC +
Preference number: 4 (lower is better)
Translates to: TEYLAIWFLTRVFITVHQTHSHL*SPLHRV
Trigger: GACCCGATGGAGAGGGCTGCATAGATGAGAATGAGT...TTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAGTACTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp ACTGAGTACTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATCTTGTAAGCCACTGTaGCCTCGAAAGGGCAGATCT +
Preference number: 4 (lower is better)
Translates to: TEYLAIWFLTRVFITVHQSCKPL*PRKGRS
Trigger: AGATCTGCCCTTTCGAGGGCACAGTGGCTTACAAGA...TTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAGTACTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp CAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACGTTATGCTGCTTGGTTaGACACTCGTCAAGATCTTT +
Preference number: 4 (lower is better)
Translates to: QQKPTACTRRSKVSRSEDVMLLG*TLVKIF
Trigger: AAAGATCTTGACGAGTGTGCAACCAAGCAGCATAAC...GTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACAGGAATGCCGGCAAATaGGAACAATACACTGATTTC +
Preference number: 4 (lower is better)
Translates to: QQKPTACTRRSKVSRSEDRNAGK*EQYTDF
Trigger: GAAATCAGTGTATTGTTCCCATTTGCCGGCATTCCT...GTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAACAGCACTGCATTTTaGTTATGGACTGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: FENLLAPNRQQKPTACTRNSTAF*LWTVAA
Trigger: AGCTGCCACAGTCCATAACCAAAATGCAGTGCTGTT...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATAAATCTACCACGGATATCCAGCTaGAAGCCCTTGTTGCACTCG +
Preference number: 4 (lower is better)
Translates to: LGNLVPNSCLYYSASINLPRISS*KPLLHS
Trigger: CGAGTGCAACAAGGGCTTCCAGCTGGATATCCGTGG...TAGATTTATTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCTGGTTTCTATGCAGATaGTTTTTGTTGGGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSWFLCR*FLLGPE
Trigger: CTCTGGACCCAACAAAAACCATCTGCATAGAAACCA...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAAGACACAGATGTTTaGAAGGGAGCACTCATCGAT +
Preference number: 4 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSKDTDV*KGALID
Trigger: ATCGATGAGTGCTCCCTTCCAAACATCTGTGTCTTT...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCATCAAGTATCTGTTGTaGTTCATCAGAGTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRIKYLL*FIRVVR
Trigger: CCTCACAACTCTGATGAACCACAACAGATACTTGAT...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp CCCTCCAGCCTTAATCCACACAAGAACATAAAACCAAGGTGTAAACTAAAATGGGTATGCATTATAACGTaGTCCACAGACATTGGGTCC +
Preference number: 4 (lower is better)
Translates to: PSSLNPHKNIKPRCKLKWVCIIT*STDIGS
Trigger: GGACCCAATGTCTGTGGATCACGTTATAATGCATAC...CCATTTTAGTTTACACCTTGGTTTTATGTTCTTGTGTGGATTAAGGCTGGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp ACTGAGTACTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATGCAGAAGTAGCTGCTaGCAGTGTTTGTACATTCCC +
Preference number: 4 (lower is better)
Translates to: TEYLAIWFLTRVFITVHQCRSSC*QCLYIP
Trigger: GGGAATGTACAAACACTGTCAGCAGCTACTTCTGCA...TTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAGTACTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp CTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATAAATCTAGCCAGCAAGTGCCCTTaGTGGTTTCTATGCAGATGG +
Preference number: 4 (lower is better)
Translates to: LGNLVPNSCLYYSASINLASKCP*WFLCRW
Trigger: CCATCTGCATAGAAACCATCAAGGGCACTTGCTGGC...TAGATTTATTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp ACTGAGTACTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATGTTGTGAGACAGTATaGAGCCATGGTTACAGCGAC +
Preference number: 4 (lower is better)
Translates to: TEYLAIWFLTRVFITVHQCCETV*SHGYSD
Trigger: GTCGCTGTAACCATGGCTTCATACTGTCTCACAACA...TTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAGTACTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp ACTGAGTACTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAACATCTACGCATCTGGTaGCATCAGGAGAGGTGTAAA +
Preference number: 4 (lower is better)
Translates to: TEYLAIWFLTRVFITVHQHLRIW*HQERCK
Trigger: TTTACACCTCTCCTGATGGCACCAGATGCGTAGATG...TTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAGTACTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp CTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATAAATCTAAGCCTTCATCACACTTaGATTCAAAGTCCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LGNLVPNSCLYYSASINLSLHHT*IQSPPG
Trigger: CCCCGGGGGACTTTGAATGCAAGTGTGATGAAGGCT...TAGATTTATTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp CTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATAAATCTATTCCCACGGTGTCGATaGACTGGCCATGACTGCATA +
Preference number: 4 (lower is better)
Translates to: LGNLVPNSCLYYSASINLFPRCR*TGHDCI
Trigger: TATGCAGTCATGGCCAGTGCATCGACACCGTGGGAA...TAGATTTATTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp CTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATAAATCTACTGACAGGTTCCAGGTaGACATTTCCCAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: LGNLVPNSCLYYSASINLLTGSR*TFPRIQ
Trigger: CTGGATCCTGGGAAATGTGCACCTGGAACCTGTCAG...TAGATTTATTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp CCCTCCAGCCTTAATCCACACAAGAACATAAAACCAAGGTGTAAACTAAAATGGACTCGTCAAGATCTTTaGAGCTCCTTCCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: PSSLNPHKNIKPRCKLKWTRQDL*SSFHPL
Trigger: AAGAGGATGGAAGGAGCTGCAAAGATCTTGACGAGT...CCATTTTAGTTTACACCTTGGTTTTATGTTCTTGTGTGGATTAAGGCTGGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATAAATCTATGCTGCAGTGTTGGATaGATCTGGAGCCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: LGNLVPNSCLYYSASINLCCSVG*IWSHRK
Trigger: CTTCCTGTGGCTCCAGATCCATCCAACACTGCAGCA...TAGATTTATTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATAAATCTACCGATGTACCCTTTCTaGCACAGACAGTGGTCATCG +
Preference number: 4 (lower is better)
Translates to: LGNLVPNSCLYYSASINLPMYPF*HRQWSS
Trigger: CGATGACCACTGTCTGTGCCAGAAAGGGTACATCGG...TAGATTTATTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp ACTGAGTACTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAAAAACTCATCTGTGCTTaGGATGGGGCACTGTTCACA +
Preference number: 4 (lower is better)
Translates to: TEYLAIWFLTRVFITVHQKLICA*DGALFT
Trigger: TGTGAACAGTGCCCCATCCCAAGCACAGATGAGTTT...TTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAGTACTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CCCTCCAGCCTTAATCCACACAAGAACATAAAACCAAGGTGTAAACTAAAATGGACGGTATTGACACACTaGCCATTTCTGCAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: PSSLNPHKNIKPRCKLKWTVLTH*PFLQRF
Trigger: GAACCTTTGCAGAAATGGCCAGTGTGTCAATACCGT...CCATTTTAGTTTACACCTTGGTTTTATGTTCTTGTGTGGATTAAGGCTGGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp CTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATAAATCTAGTCCAGCAGGGCATTTaGACTCAAAAGATCCAACGG +
Preference number: 4 (lower is better)
Translates to: LGNLVPNSCLYYSASINLVQQGI*TQKIQR
Trigger: CCGTTGGATCTTTTGAGTGCAAATGCCCTGCTGGAC...TAGATTTATTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp CTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATAAATCTACAAAGGCATACTCAGTaGTGGCACAACAGCATTCCG +
Preference number: 4 (lower is better)
Translates to: LGNLVPNSCLYYSASINLQRHTQ*WHNSIP
Trigger: CGGAATGCTGTTGTGCCAGCACTGAGTATGCCTTTG...TAGATTTATTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp ACTGAGTACTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAAACTCATTGTTATCAATaGAGGCAGTGTGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: TEYLAIWFLTRVFITVHQTHCYQ*RQCDAG
Trigger: CCCAGCATCACACTGCCTGCATTGATAACAATGAGT...TTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAGTACTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CCCTCCAGCCTTAATCCACACAAGAACATAAAACCAAGGTGTAAACTAAAATGGAAAGACACAGATGTTTaGAAGGGAGCACTCATCGAT +
Preference number: 4 (lower is better)
Translates to: PSSLNPHKNIKPRCKLKWKDTDV*KGALID
Trigger: ATCGATGAGTGCTCCCTTCCAAACATCTGTGTCTTT...CCATTTTAGTTTACACCTTGGTTTTATGTTCTTGTGTGGATTAAGGCTGGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CCCTCCAGCCTTAATCCACACAAGAACATAAAACCAAGGTGTAAACTAAAATGGCACTTGCATGTAGTCTaGAGGACAAATGCAGGTATA +
Preference number: 4 (lower is better)
Translates to: PSSLNPHKNIKPRCKLKWHLHVV*RTNAGI
Trigger: TATACCTGCATTTGTCCTCCAGACTACATGCAAGTG...CCATTTTAGTTTACACCTTGGTTTTATGTTCTTGTGTGGATTAAGGCTGGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp CTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATAAATCTAGAGAACATTCACAAATaGAGGAGCCAGGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LGNLVPNSCLYYSASINLENIHK*RSQGCS
Trigger: AGAACAGCCCTGGCTCCTTCATTTGTGAATGTTCTC...TAGATTTATTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp CCCTCCAGCCTTAATCCACACAAGAACATAAAACCAAGGTGTAAACTAAAATGGTTTTCCTTTCTTCCCTaGATATCCCATATCACAGTG +
Preference number: 4 (lower is better)
Translates to: PSSLNPHKNIKPRCKLKWFSFLP*ISHITV
Trigger: CACTGTGATATGGGATATTCAGGGAAGAAAGGAAAA...CCATTTTAGTTTACACCTTGGTTTTATGTTCTTGTGTGGATTAAGGCTGGAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp ACTGAGTACTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAACAACTCCAATTTCATTaGTGCAGGCTGTATCTCCAT +
Preference number: 4 (lower is better)
Translates to: TEYLAIWFLTRVFITVHQQLQFH*CRLYLH
Trigger: ATGGAGATACAGCCTGCAGCAATGAAATTGGAGTTG...TTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAGTACTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp ACTGAGTACTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATCTGTGTTAATGCACTaGCCATGTCTACAGACATCA +
Preference number: 4 (lower is better)
Translates to: TEYLAIWFLTRVFITVHQSVLMH*PCLQTS
Trigger: TGATGTCTGTAGACATGGGCAGTGCATTAACACAGA...TTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAGTACTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp CCCTCCAGCCTTAATCCACACAAGAACATAAAACCAAGGTGTAAACTAAAATGGTTCTTACACTCCATTTaGTTCTCAGTACAGTCGTGT +
Preference number: 4 (lower is better)
Translates to: PSSLNPHKNIKPRCKLKWFLHSI*FSVQSC
Trigger: ACACGACTGTACTGAGAAGCAAATGGAGTGTAAGAA...CCATTTTAGTTTACACCTTGGTTTTATGTTCTTGTGTGGATTAAGGCTGGAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp ACTGAGTACTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAAGCTTGGAATGGTTTCTaGATTTGGGTGATGAACACT +
Preference number: 4 (lower is better)
Translates to: TEYLAIWFLTRVFITVHQAWNGF*IWVMNT
Trigger: AGTGTTCATCACCCAAATCCAGAAACCATTCCAAGC...TTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAGTACTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR TCA 90 bp CTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATAAATCTAGATCCACATTTGTTTTaGAGCCAGTGTGACAAAGGC +
Preference number: 4 (lower is better)
Translates to: LGNLVPNSCLYYSASINLDPHLF*SQCDKG
Trigger: GCCTTTGTCACACTGGCTTCAAAACAAATGTGGATC...TAGATTTATTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp ACTGAGTACTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAAAGACATCAGGTTCTTTaGATTCGTCCATATCAACTG +
Preference number: 4 (lower is better)
Translates to: TEYLAIWFLTRVFITVHQRHQVL*IRPYQL
Trigger: CAGTTGATATGGACGAATGCAAAGAACCTGATGTCT...TTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAGTACTCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp CTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATAAATCTAATCTGGCACATGTTTTaGAAGACCTCCGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: LGNLVPNSCLYYSASINLIWHMF*KTSEKQ
Trigger: CTGCTTTTCGGAGGTCTTGCAAAACATGTGCCAGAT...TAGATTTATTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR GCA 90 bp CCCTCCAGCCTTAATCCACACAAGAACATAAAACCAAGGTGTAAACTAAAATGGTTGATATCTTCACATTaGGTGCCTTTAATTCTTGAG +
Preference number: 4 (lower is better)
Translates to: PSSLNPHKNIKPRCKLKWLISSH*VPLILE
Trigger: CTCAAGAATTAAAGGCACGCAATGTGAAGATATCAA...CCATTTTAGTTTACACCTTGGTTTTATGTTCTTGTGTGGATTAAGGCTGGAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CCA 90 bp CTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATAAATCTACTGACCCCTTCTTTCTaGTTGATTTTAAAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LGNLVPNSCLYYSASINLLTPSF*LILKKP
Trigger: TGGCTTCTTTAAAATCAACCAGAAAGAAGGGGTCAG...TAGATTTATTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 90 bp ACTCATAGCAGGCCTCTGGGGACAGTGAGTTGTCGTCCATCTCGCTaGTGGCAGGTGGCTCTGGGCCGCCTCGGCCCATGCCCATTCCAG +
Preference number: 5 (lower is better)
Translates to: THSRPLGTVSCRPSR*WQVALGRLGPCPFQ
Trigger: CTGGAATGGGCATGGGCCGAGGCGGCCCAGAGCCACCTGCCAGCAGCGAGATGGACGACAACTCACTGTCCCCAGAGGCCTGCTATGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 90 bp CGTCCATCTCGCTGCTGGCAGGTGGCTCTGGGCCGCCTCGGCCCATaGCCATTCCAGAAACACAATGCCCTTGGCCTATCCGGAAGTATC +
Preference number: 5 (lower is better)
Translates to: RPSRCWQVALGRLGP*PFQKHNALGLSGSI
Trigger: GATACTTCCGGATAGGCCAAGGGCATTGTGTTTCTGGAATGGGCATGGGCCGAGGCGGCCCAGAGCCACCTGCCAGCAGCGAGATGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACACTCCCAGCCTCCAAATaGGCGTCCGCCCCATGGCTC +
Preference number: 5 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTLPASK*ASAPWL
Trigger: GAGCCATGGGGCGGACGCCAATTTGGAGGCTGGGAG...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCTCCCAGCCTCCAAATaGGCGTCCGCCCCATGGCTC +
Preference number: 5 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPLPASK*ASAPWL
Trigger: GAGCCATGGGGCGGACGCCAATTTGGAGGCTGGGAG...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 90 bp CCGAGACGGAGATGGATATGGATATTCTGGCGGTGGCCGAGGGGCTaGAATCACAGGCCCAGGAGGATAGCCAGGAGGAACGGGCTGAAC +
Preference number: 5 (lower is better)
Translates to: PRRRWIWIFWRWPRG*NHRPRRIARRNGLN
Trigger: GTTCAGCCCGTTCCTCCTGGCTATCCTCCTGGGCCTGTGATTCCAGCCCCTCGGCCACCGCCAGAATATCCATATCCATCTCCGTCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 90 bp TCCCAGCTGGCGAGGCTCACGTTGGCTTCCATCTCAGACCCGTCCTaGATGTCGGAGGCATCCGTTTCGTTCGTGCTTCTCCGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: SQLARLTLASISDPS*MSEASVSFVLLRFR
Trigger: CCGGAAACGGAGAAGCACGAACGAAACGGATGCCTCCGACATCCAGGACGGGTCTGAGATGGAAGCCAACGTGAGCCTCGCCAGCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTTGCAAGCACACCGATTaGGGGCCACACACCTCCCTC +
Preference number: 5 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPCKHTD*GPHTSL
Trigger: GAGGGAGGTGTGTGGCCCCAAATCGGTGTGCTTGCA...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCATACCCGCCAGGGGCGTaGAGGCACTGGCCATTGCCA +
Preference number: 5 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPYPPGA*RHWPLP
Trigger: TGGCAATGGCCAGTGCCTCAACGCCCCTGGCGGGTA...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCAGCAGCACTCGGACTaGGTGACGGGGTTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPQQHSD*VTGFLL
Trigger: CAACAGGAACCCCGTCACCAAGTCCGAGTGCTGCTG...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 90 bp CGTACGTGCAAGCACACCGATTTGGGGCCACACACCTCCCTCCGTTaGGACAGCCACTTTCACAGACAGGCTGTCCACAGTGAGTGCCGA +
Preference number: 5 (lower is better)
Translates to: RTCKHTDLGPHTSLR*DSHFHRQAVHSECR
Trigger: TCGGCACTCACTGTGGACAGCCTGTCTGTGAAAGTGGCTGTCTCAACGGAGGGAGGTGTGTGGCCCCAAATCGGTGTGCTTGCACGTACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 90 bp CATTCTCACAGATCCCGGGCTTGGTCTGACACTCATTCTCATCTATaGAGCCCTCTCCATCGGGTCTGCGCTGGTACCCAGGGCCGCAGA +
Preference number: 5 (lower is better)
Translates to: HSHRSRAWSDTHSHL*SPLHRVCAGTQGRR
Trigger: TCTGCGGCCCTGGGTACCAGCGCAGACCCGATGGAGAGGGCTGCATAGATGAGAATGAGTGTCAGACCAAGCCCGGGATCTGTGAGAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 90 bp ATAGCCAGGAGGAACGGGCTGAACTGGAGGAAGGGGGCCAATGGGTaGGGGAGGATATTCTGGTCTCCCGGGAATTACCAGAGGGACAGA +
Preference number: 5 (lower is better)
Translates to: IARRNGLNWRKGANG*GRIFWSPGNYQRDR
Trigger: TCTGTCCCTCTGGTAATTCCCGGGAGACCAGAATATCCTCCCCCACCCATTGGCCCCCTTCCTCCAGTTCAGCCCGTTCCTCCTGGCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACACTTCTCTTGGCCCGATaGGCTCTGGTCTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTLLLAR*ALVSFR
Trigger: CCTGAAGGAGACCAGAGCCAATCGGGCCAAGAGAAG...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGTACCCGCCAGGGGCGTaGAGGCACTGGCCATTGCCA +
Preference number: 5 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVYPPGA*RHWPLP
Trigger: TGGCAATGGCCAGTGCCTCAACGCCCCTGGCGGGTA...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCAGGCTGTATCTCCATaGTCTCCCCGGGGTCGGATA +
Preference number: 5 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPQAVSP*SPRGRI
Trigger: TATCCGACCCCGGGGAGACAATGGAGATACAGCCTG...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACAGTTCTGGCAGCCATGTaGACAGCGGTGGTTACCCTC +
Preference number: 5 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTVLAAM*TAVVTL
Trigger: GAGGGTAACCACCGCTGTCAACATGGCTGCCAGAAC...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 90 bp GGGCTGAACTGGAGGAAGGGGGCCAATGGGTGGGGGAGGATATTCTaGTCTCCCGGGAATTACCAGAGGGACAGAGCACAGCTTGTTGAA +
Preference number: 5 (lower is better)
Translates to: GLNWRKGANGWGRIF*SPGNYQRDRAQLVE
Trigger: TTCAACAAGCTGTGCTCTGTCCCTCTGGTAATTCCCGGGAGACCAGAATATCCTCCCCCACCCATTGGCCCCCTTCCTCCAGTTCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTACACACAGGCCGTTCTaGCATACTCCCGGGAACACT +
Preference number: 5 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPTHRPF*HTPGNT
Trigger: AGTGTTCCCGGGAGTATGCAAGAACGGCCTGTGTGT...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACAGGACTGCAGCTGCACTaGAAGCTCCCGGCTGTATTT +
Preference number: 5 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTGLQLH*KLPAVF
Trigger: AAATACAGCCGGGAGCTTCAAGTGCAGCTGCAGTCC...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCACTGTTCACAGGGTTaGTTCCAGGCTCTGCCGATG +
Preference number: 5 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPHCSQG*FQALPM
Trigger: CATCGGCAGAGCCTGGAACAAACCCTGTGAACAGTG...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCGGGGTTCCTGTTGCTaGAGCCAATCTGGCACATGT +
Preference number: 5 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPRGSCC*SQSGTC
Trigger: ACATGTGCCAGATTGGCTCAAGCAACAGGAACCCCG...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTAACCCAGGAGGGCATTaGCATGTGAAGCCACCGATG +
Preference number: 5 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPNPGGH*HVKPPM
Trigger: CATCGGTGGCTTCACATGCAAATGCCCTCCTGGGTT...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 90 bp GGTGGCGGCCAGCGATGGGCAAGGTGCACTCTTCATCGTCATACTTaGGGAAGCAGGTCTCCAGGCGGATGTCAAGACAGATTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: GGGQRWARCTLHRHT*GSRSPGGCQDRFFL
Trigger: CAGGAAGAATCTGTCTTGACATCCGCCTGGAGACCTGCTTCCTCAAGTATGACGATGAAGAGTGCACCTTGCCCATCGCTGGCCGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 90 bp ACTCGCCACCAGTGCATGGGTTCTTCTCACACTCATCCACGTCGATaGATTCGCCACGGATATCCAGCTGGAAGCCCTTGTTGCACTCGC +
Preference number: 5 (lower is better)
Translates to: TRHQCMGSSHTHPRR*IRHGYPAGSPCCTR
Trigger: GCGAGTGCAACAAGGGCTTCCAGCTGGATATCCGTGGCGAATGCATCGACGTGGATGAGTGTGAGAAGAACCCATGCACTGGTGGCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 90 bp TTCACACTGGGGTCCAGTAAAGCCGTACGTGCAAGCACACCGATTTaGGGCCACACACCTCCCTCCGTTGAGACAGCCACTTTCACAGAC +
Preference number: 5 (lower is better)
Translates to: FTLGSSKAVRASTPI*GHTPPSVETATFTD
Trigger: GTCTGTGAAAGTGGCTGTCTCAACGGAGGGAGGTGTGTGGCCCCAAATCGGTGTGCTTGCACGTACGGCTTTACTGGACCCCAGTGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 90 bp GAGTCATCAGGGCCCACAATGATCCCACTTCCAAAGGGGCAGATCTaGCGGAAAGCCTCATCTGGCTCAGTGGGGCACAACTCACAAGGA +
Preference number: 5 (lower is better)
Translates to: ESSGPTMIPLPKGQI*RKASSGSVGHNSQG
Trigger: TCCTTGTGAGTTGTGCCCCACTGAGCCAGATGAGGCTTTCCGCCAGATCTGCCCCTTTGGAAGTGGGATCATTGTGGGCCCTGATGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCAGCGGATGCTGCAGTGTaGGATGGATCTGGAGCCACA +
Preference number: 5 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPADAAV*DGSGAT
Trigger: TGTGGCTCCAGATCCATCCAACACTGCAGCATCCGC...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACATTCAAGGTGGCTCCGTaGATGTTGATCTCACAGCGC +
Preference number: 5 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTFKVAP*MLISQR
Trigger: GCGCTGTGAGATCAACATCAACGGAGCCACCTTGAA...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACAGCATGTCTGCCACAGTaGTGTGCTCCGATCTCACAT +
Preference number: 5 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTACLPQ*CAPISH
Trigger: ATGTGAGATCGGAGCACACAACTGTGGCAGACATGC...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCACAGGCTGTATCTCCATaGTCTCCCCGGGGTCGGATA +
Preference number: 5 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPQAVSP*SPRGRI
Trigger: TATCCGACCCCGGGGAGACAATGGAGATACAGCCTG...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACATCAGGTAGTAACCAGTaGGACAGCGACACTGGAAGC +
Preference number: 5 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTSGSNQ*DSDTGS
Trigger: GCTTCCAGTGTCGCTGTCCAACTGGTTACTACCTGA...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCATCTGGGGACAGTGAGTaGTCGTCCATCTCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPSGDSE*SSISLL
Trigger: CAGCAGCGAGATGGACGACAACTCACTGTCCCCAGA...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 90 bp TCTGGTAGCCAGCTCTGCAGTGACAGGTGTAGGAGCCCTGGTTGTTaGTGCACTCGCCACCAGTGCATGGGTTCTTCTCACACTCATCCA +
Preference number: 5 (lower is better)
Translates to: SGSQLCSDRCRSPGC*CTRHQCMGSSHTHP
Trigger: TGGATGAGTGTGAGAAGAACCCATGCACTGGTGGCGAGTGCATCAACAACCAGGGCTCCTACACCTGTCACTGCAGAGCTGGCTACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 90 bp GCCACCCTCAGTATTAGAGCAACCGTAACTGCAGGGGGCCTGGGATaGGCCACACTCATTGATGTCTTGGCAGCCTCCACTGAACTGTTC +
Preference number: 5 (lower is better)
Translates to: ATLSIRATVTAGGLG*ATLIDVLAASTELF
Trigger: GAACAGTTCAGTGGAGGCTGCCAAGACATCAATGAGTGTGGCTCATCCCAGGCCCCCTGCAGTTACGGTTGCTCTAATACTGAGGGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 90 bp GCCACAGGAAGGAGATATCTGACCAGACGGGCAAGTGCACATATTTaGCCTCGAGCAGAATCCATCCCCACAGGAATGCCGGCAAATGGG +
Preference number: 5 (lower is better)
Translates to: ATGRRYLTRRASAHI*PRAESIPTGMPANG
Trigger: CCCATTTGCCGGCATTCCTGTGGGGATGGATTCTGCTCGAGGCCAAATATGTGCACTTGCCCGTCTGGTCAGATATCTCCTTCCTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 90 bp ACAGGTGTAGGAGCCCTGGTTGTTGATGCACTCGCCACCAGTGCATaGGTTCTTCTCACACTCATCCACGTCGATGCATTCGCCACGGAT +
Preference number: 5 (lower is better)
Translates to: TGVGALVVDALATSA*VLLTLIHVDAFATD
Trigger: ATCCGTGGCGAATGCATCGACGTGGATGAGTGTGAGAAGAACCCATGCACTGGTGGCGAGTGCATCAACAACCAGGGCTCCTACACCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CCTTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACGTGATCCACAGACATaGGGTCCTTTCAGCGCATCG +
Preference number: 5 (lower is better)
Translates to: PCPPQPQCTSGPVSENPLRDPQT*GPFSAS
Trigger: CGATGCGCTGAAAGGACCCAATGTCTGTGGATCACG...TAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCGGTAGCTACCGGGAGTaGGAATGCAGCGCCCATTTT +
Preference number: 5 (lower is better)
Translates to: LSSPTSVHKWASLRESTTGSYRE*ECSAHF
Trigger: AAAATGGGCGCTGCATTCCAACTCCCGGTAGCTACC...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCAAGAGGCCCGGGAGGTaGTGGCAAGTTCCAAAGACA +
Preference number: 5 (lower is better)
Translates to: LSSPTSVHKWASLRESTTKRPGR*WQVPKT
Trigger: TGTCTTTGGAACTTGCCACAACCTCCCGGGCCTCTT...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCCTTCACAAGTCATCATaGGGCCAGGCTCGAACCCCT +
Preference number: 5 (lower is better)
Translates to: LSSPTSVHKWASLRESTTLHKSS*GQARTP
Trigger: AGGGGTTCGAGCCTGGCCCAATGATGACTTGTGAAG...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 90 bp GGTGAAGCCATCCCCTGTATAGCCATCCTTACAGAGACAGCGATATaGCCCCATGGTGTTCTTGCAGTCCGCGTGTTGGCTGCACATGTG +
Preference number: 5 (lower is better)
Translates to: GEAIPCIAILTETAI*PHGVLAVRVLAAHV
Trigger: CACATGTGCAGCCAACACGCGGACTGCAAGAACACCATGGGGTCATATCGCTGTCTCTGTAAGGATGGCTATACAGGGGATGGCTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 90 bp AGAAGAATCCCACGGGACACTCACACCGGAAGCTGCCAACCATGTTaGTGCACACTCCATTTTCACAGACCCCAGGGATCTCCCGGCATT +
Preference number: 5 (lower is better)
Translates to: RRIPRDTHTGSCQPC*CTLHFHRPQGSPGI
Trigger: AATGCCGGGAGATCCCTGGGGTCTGTGAAAATGGAGTGTGCATCAACATGGTTGGCAGCTTCCGGTGTGAGTGTCCCGTGGGATTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 90 bp TGGATCTGGAGCCACAGGAAGGAGATATCTGACCAGACGGGCAAGTaGACATATTTGGCCTCGAGCAGAATCCATCCCCACAGGAATGCC +
Preference number: 5 (lower is better)
Translates to: WIWSHRKEISDQTGK*TYLASSRIHPHRNA
Trigger: GGCATTCCTGTGGGGATGGATTCTGCTCGAGGCCAAATATGTGCACTTGCCCGTCTGGTCAGATATCTCCTTCCTGTGGCTCCAGATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 90 bp GACCAGTTGACAGTAGTCAGTAACGTTGAAAGGCAGCACCCTTGGTaGTTCCCGAGACGGAGATGGATATGGATATTCTGGCGGTGGCCG +
Preference number: 5 (lower is better)
Translates to: DQLTVVSNVERQHPW*FPRRRWIWIFWRWP
Trigger: CGGCCACCGCCAGAATATCCATATCCATCTCCGTCTCGGGAACCACCAAGGGTGCTGCCTTTCAACGTTACTGACTACTGTCAACTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 90 bp GCGGACCAGTTGACAGTAGTCAGTAACGTTGAAAGGCAGCACCCTTaGTGGTTCCCGAGACGGAGATGGATATGGATATTCTGGCGGTGG +
Preference number: 5 (lower is better)
Translates to: ADQLTVVSNVERQHP*WFPRRRWIWIFWRW
Trigger: CCACCGCCAGAATATCCATATCCATCTCCGTCTCGGGAACCACCAAGGGTGCTGCCTTTCAACGTTACTGACTACTGTCAACTGGTCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 90 bp GCCCATTCCAGAAACACAATGCCCTTGGCCTATCCGGAAGTATCCTaGTGGACAGCCACACAGGTAGCCACCCTCAGTATTAGAGCAACC +
Preference number: 5 (lower is better)
Translates to: AHSRNTMPLAYPEVS*WTATQVATLSIRAT
Trigger: GGTTGCTCTAATACTGAGGGTGGCTACCTGTGTGGCTGTCCACCAGGATACTTCCGGATAGGCCAAGGGCATTGTGTTTCTGGAATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCTGGCACATCTGGTaGCTTACCACAGTAAAACAT +
Preference number: 5 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPPWHIW*LTTVKH
Trigger: ATGTTTTACTGTGGTAAGCAACCAGATGTGCCAGGG...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CCTTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTAGCACAGCAAAGTGTTTaGGTGCAGACAATCCCGCTG +
Preference number: 5 (lower is better)
Translates to: PCPPQPQCTSGPVSENPLAQQSV*VQTIPL
Trigger: CAGCGGGATTGTCTGCACCAAAACACTTTGCTGTGC...TAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCGCACAGCAAAGTGTTTaGGTGCAGACAATCCCGCTG +
Preference number: 5 (lower is better)
Translates to: LSSPTSVHKWASLRESTTAQQSV*VQTIPL
Trigger: CAGCGGGATTGTCTGCACCAAAACACTTTGCTGTGC...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTGAGATAGCGGACCAGTaGACAGTAGTCAGTAACGTT +
Preference number: 5 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPEIADQ*TVVSNV
Trigger: AACGTTACTGACTACTGTCAACTGGTCCGCTATCTC...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCAAATGCAGCGCCCATTTaGACAGAGATAGCGGACCAG +
Preference number: 5 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPNAAPI*TEIADQ
Trigger: CTGGTCCGCTATCTCTGTCAAAATGGGCGCTGCATT...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCAGCTCCCGGCTGTATTaGTGCATACAGCATGTCTGC +
Preference number: 5 (lower is better)
Translates to: LSSPTSVHKWASLRESTTSSRLY*CIQHVC
Trigger: GCAGACATGCTGTATGCACAAATACAGCCGGGAGCT...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCTCAGGTAGTAACCAGTaGGACAGCGACACTGGAAGC +
Preference number: 5 (lower is better)
Translates to: LSSPTSVHKWASLRESTTSGSNQ*DSDTGS
Trigger: GCTTCCAGTGTCGCTGTCCAACTGGTTACTACCTGA...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTTGGTTACAGCGACAGTaGAAGGAGCCAATCGTGTTT +
Preference number: 5 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPWLQRQ*KEPIVF
Trigger: AAACACGATTGGCTCCTTCAACTGTCGCTGTAACCA...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCGTTCCTCAGCAGCACTCGGACTaGGTGACGGGGTTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: FQDLKTNAEQSIRWKRVPQQHSD*VTGFLL
Trigger: CAACAGGAACCCCGTCACCAAGTCCGAGTGCTGCTG...AGGAACGCGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTTCAGACGTGCACTCATaGTTATCAATGCAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPSDVHS*LSMQAV
Trigger: CACTGCCTGCATTGATAACAATGAGTGCACGTCTGA...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CCTTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTAGATGAGCCACACTCATaGATGTCTTGGCAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: PCPPQPQCTSGPVSENPLDEPHS*MSWQPP
Trigger: TGGAGGCTGCCAAGACATCAATGAGTGTGGCTCATC...TAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 90 bp GGCCATTCTGAAGACACTCATCTATGTCTCTGCACTCAGTTCTGGTaGGTGTGCTCTGGTAGCCAGCTCTGCAGTGACAGGTGTAGGAGC +
Preference number: 5 (lower is better)
Translates to: GHSEDTHLCLCTQFW*VCSGSQLCSDRCRS
Trigger: GCTCCTACACCTGTCACTGCAGAGCTGGCTACCAGAGCACACTCACCAGAACTGAGTGCAGAGACATAGATGAGTGTCTTCAGAATGGCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 90 bp CACAGAGGTTCAGGTTCTCGGAGCACTCGTCGAGGTCTGTACAGGTaGAGCCATCCCCTGTATAGCCATCCTTACAGAGACAGCGATATG +
Preference number: 5 (lower is better)
Translates to: HRGSGSRSTRRGLYR*SHPLYSHPYRDSDM
Trigger: CATATCGCTGTCTCTGTAAGGATGGCTATACAGGGGATGGCTTCACCTGTACAGACCTCGACGAGTGCTCCGAGAACCTGAACCTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 90 bp TTCTTCCAGTGGAGGACAGGGAGAACCCCTCTGGACACAGACATTTaGAGCTACCCTCAGTGTTGCTGCAGGTCCCCAAGGCACAGATTT +
Preference number: 5 (lower is better)
Translates to: FFQWRTGRTPLDTDI*SYPQCCCRSPRHRF
Trigger: AAATCTGTGCCTTGGGGACCTGCAGCAACACTGAGGGTAGCTTCAAATGTCTGTGTCCAGAGGGGTTCTCCCTGTCCTCCACTGGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 90 bp CATCCCCTGTATAGCCATCCTTACAGAGACAGCGATATGACCCCATaGTGTTCTTGCAGTCCGCGTGTTGGCTGCACATGTGGGTTCCAT +
Preference number: 5 (lower is better)
Translates to: HPLYSHPYRDSDMTP*CSCSPRVGCTCGFH
Trigger: ATGGAACCCACATGTGCAGCCAACACGCGGACTGCAAGAACACCATGGGGTCATATCGCTGTCTCTGTAAGGATGGCTATACAGGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCGCGGATGCTGCAGTGTaGGATGGATCTGGAGCCACA +
Preference number: 5 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVADAAV*DGSGAT
Trigger: TGTGGCTCCAGATCCATCCAACACTGCAGCATCCGC...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCAGGGACAGAGCACAGCTaGTTGAAATCCTCAGTTGAC +
Preference number: 5 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPGTEHS*LKSSVD
Trigger: GTCAACTGAGGATTTCAACAAGCTGTGCTCTGTCCC...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCAACAGCATTCCGATTaGGTAACAGCACCAAACAAC +
Preference number: 5 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPQQHSD*VTAPNN
Trigger: GTTGTTTGGTGCTGTTACCAAATCGGAATGCTGTTG...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCACTCAGCTCACACTCGTaGATGTCAATGCATGCAGAG +
Preference number: 5 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPLSSHS*MSMHAE
Trigger: CTCTGCATGCATTGACATCAACGAGTGTGAGCTGAG...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGGGACTGCAGCTGCACTaGAAGCTCCCGGCTGTATTT +
Preference number: 5 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWGLQLH*KLPAVF
Trigger: AAATACAGCCGGGAGCTTCAAGTGCAGCTGCAGTCC...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGAAGAGGCCCGGGAGGTaGTGGCAAGTTCCAAAGACA +
Preference number: 5 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWKRPGR*WQVPKT
Trigger: TGTCTTTGGAACTTGCCACAACCTCCCGGGCCTCTT...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGCTTCACAAGTCATCATaGGGCCAGGCTCGAACCCCT +
Preference number: 5 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWLHKSS*GQARTP
Trigger: AGGGGTTCGAGCCTGGCCCAATGATGACTTGTGAAG...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGCGGGGTTCCTGTTGCTaGAGCCAATCTGGCACATGT +
Preference number: 5 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWRGSCC*SQSGTC
Trigger: ACATGTGCCAGATTGGCTCAAGCAACAGGAACCCCG...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCACACTCATTGATGTCTaGGCAGCCTCCACTGAACTG +
Preference number: 5 (lower is better)
Translates to: LSSPTSVHKWASLRESTTTLIDV*AASTEL
Trigger: CAGTTCAGTGGAGGCTGCCAAGACATCAATGAGTGT...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACATTGACATGGGAAATATaGAAAGCAAAGCTAGCCGGC +
Preference number: 5 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTLTWEI*KAKLAG
Trigger: GCCGGCTAGCTTTGCTTTCAATATTTCCCATGTCAA...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 90 bp TCCTGTAGCATCCAAAGTCATTCCATTGGGACACTCGCACTTGAATaGACCCCTGGAGTTGACACACAGGCCGTTCTTGCATACTCCCGG +
Preference number: 5 (lower is better)
Translates to: SCSIQSHSIGTLALE*TPGVDTQAVLAYSR
Trigger: CCGGGAGTATGCAAGAACGGCCTGTGTGTCAACTCCAGGGGTTCATTCAAGTGCGAGTGTCCCAATGGAATGACTTTGGATGCTACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 90 bp CACAACGCCCATGGGGACAGAGATTCGCACTCAGCTCACACTCGTTaGTGTCAATGCATGCAGAGATGTTTGGGGACAATTGGTGACCAG +
Preference number: 5 (lower is better)
Translates to: HNAHGDRDSHSAHTR*CQCMQRCLGTIGDQ
Trigger: CTGGTCACCAATTGTCCCCAAACATCTCTGCATGCATTGACATCAACGAGTGTGAGCTGAGTGCGAATCTCTGTCCCCATGGGCGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 90 bp CTTTGCATTCGTCCATATCAACTGCTGAGTCATCAGGGCCCACAATaGTCCCACTTCCAAAGGGGCAGATCTGGCGGAAAGCCTCATCTG +
Preference number: 5 (lower is better)
Translates to: LCIRPYQLLSHQGPQ*SHFQRGRSGGKPHL
Trigger: CAGATGAGGCTTTCCGCCAGATCTGCCCCTTTGGAAGTGGGATCATTGTGGGCCCTGATGACTCAGCAGTTGATATGGACGAATGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 90 bp CAAGGATCTCCCCAGCCTTCTCCCTTCAAAGCACAGCAGCACTCCTaGTTGGAATGGTTTCTGGATTTGGGTGATGAACACTTCCCACCT +
Preference number: 5 (lower is better)
Translates to: QGSPQPSPFKAQQHS*LEWFLDLGDEHFPP
Trigger: AGGTGGGAAGTGTTCATCACCCAAATCCAGAAACCATTCCAAGCAGGAGTGCTGCTGTGCTTTGAAGGGAGAAGGCTGGGGAGATCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 90 bp CGCACTCAGCTCACACTCGTTGATGTCAATGCATGCAGAGATGTTTaGGGACAATTGGTGACCAGGAGGACATTCGCAGCGATAGCTTCC +
Preference number: 5 (lower is better)
Translates to: RTQLTLVDVNACRDV*GQLVTRRTFAAIAS
Trigger: GGAAGCTATCGCTGCGAATGTCCTCCTGGTCACCAATTGTCCCCAAACATCTCTGCATGCATTGACATCAACGAGTGTGAGCTGAGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 90 bp TTGCAGGCACACTGGTACTTCCCTATGAGGTTCACACAACGCCCATaGGGACAGAGATTCGCACTCAGCTCACACTCGTTGATGTCAATG +
Preference number: 5 (lower is better)
Translates to: LQAHWYFPMRFTQRP*GQRFALSSHSLMSM
Trigger: CATTGACATCAACGAGTGTGAGCTGAGTGCGAATCTCTGTCCCCATGGGCGTTGTGTGAACCTCATAGGGAAGTACCAGTGTGCCTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 90 bp CATTCCAGAAACACAATGCCCTTGGCCTATCCGGAAGTATCCTGGTaGACAGCCACACAGGTAGCCACCCTCAGTATTAGAGCAACCGTA +
Preference number: 5 (lower is better)
Translates to: HSRNTMPLAYPEVSW*TATQVATLSIRATV
Trigger: TACGGTTGCTCTAATACTGAGGGTGGCTACCTGTGTGGCTGTCCACCAGGATACTTCCGGATAGGCCAAGGGCATTGTGTTTCTGGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 90 bp GTGAGGGCCGGCAGGAGCTCTAGGATTCGGACCTTGTTATTGACATaGGAAATATTGAAAGCAAAGCTAGCCGGCTTCTCCACATCCCAG +
Preference number: 5 (lower is better)
Translates to: VRAGRSSRIRTLLLT*EILKAKLAGFSTSQ
Trigger: CTGGGATGTGGAGAAGCCGGCTAGCTTTGCTTTCAATATTTCCCATGTCAATAACAAGGTCCGAATCCTAGAGCTCCTGCCGGCCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCGTGATCCACAGACATaGGGTCCTTTCAGCGCATCG +
Preference number: 5 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPRDPQT*GPFSAS
Trigger: CGATGCGCTGAAAGGACCCAATGTCTGTGGATCACG...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGGGCAAGTGCACATATTaGGCCTCGAGCAGAATCCAT +
Preference number: 5 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVGKCTY*ASSRIH
Trigger: ATGGATTCTGCTCGAGGCCAAATATGTGCACTTGCC...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCCCCAACCTCAGTGCACAGACACTTCATTAAATTaGTGTCCAGCAGGGCATTTG +
Preference number: 5 (lower is better)
Translates to: VILWWLRLLPCPPQPQCTDTSLN*CPAGHL
Trigger: CAAATGCCCTGCTGGACACAAATTTAATGAAGTGTC...TGTGCACTGAGGTTGGGGAGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCGAGATAGCGGACCAGTaGACAGTAGTCAGTAACGTT +
Preference number: 5 (lower is better)
Translates to: LSSPTSVHKWASLRESTTEIADQ*TVVSNV
Trigger: AACGTTACTGACTACTGTCAACTGGTCCGCTATCTC...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTGGTAGCTACCGGGAGTaGGAATGCAGCGCCCATTTT +
Preference number: 5 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPGSYRE*ECSAHF
Trigger: AAAATGGGCGCTGCATTCCAACTCCCGGTAGCTACC...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGGAGCCAGGGCTGTTCTaGCAGACTCCATTAATGCAA +
Preference number: 5 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVEPGLF*QTPLMQ
Trigger: TTGCATTAATGGAGTCTGCAAGAACAGCCCTGGCTC...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GTGATGGAGGATGCGGTGGTGATCCTCTGGTGGCTGAGGCTGCTTCCTTGTCCTCTATGCAGATGGTTTTaGTTGGGTCCAGAGTACTTT +
Preference number: 5 (lower is better)
Translates to: VMEDAVVILWWLRLLPCPLCRWF*LGPEYF
Trigger: AAAGTACTCTGGACCCAACAAAAACCATCTGCATAG...AGGACAAGGAAGCAGCCTCAGCCACCAGAGGATCACCACCGCATCCTCCATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGTGCCAGCAAGTGCCCTaGATGGTTTCTATGCAGATG +
Preference number: 5 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVCQQVP*MVSMQM
Trigger: CATCTGCATAGAAACCATCAAGGGCACTTGCTGGCA...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CCTTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCAACTCCAATTTCATaGCTGCAGGCTGTATCTCCA +
Preference number: 5 (lower is better)
Translates to: PCPPQPQCTSGPVSENPLPTPIS*LQAVSP
Trigger: TGGAGATACAGCCTGCAGCAATGAAATTGGAGTTGG...TAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCGTTCCTCACTGTTCACAGGGTTaGTTCCAGGCTCTGCCGATG +
Preference number: 5 (lower is better)
Translates to: FQDLKTNAEQSIRWKRVPHCSQG*FQALPM
Trigger: CATCGGCAGAGCCTGGAACAAACCCTGTGAACAGTG...AGGAACGCGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGCCATTTCCACAAGGATaGCCCACAGAGCATTCATCG +
Preference number: 5 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVPFPQG*PTEHSS
Trigger: CGATGAATGCTCTGTGGGCAATCCTTGTGGAAATGG...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CAGTTTTCAGGAATCAATACGCATGACAGGGTAGCTGAGCTACTCACGAGAAGCGTGACGGGGTTCCTGTaGCTTGAGCCAATCTGGCAC +
Preference number: 5 (lower is better)
Translates to: QFSGINTHDRVAELLTRSVTGFL*LEPIWH
Trigger: GTGCCAGATTGGCTCAAGCAACAGGAACCCCGTCAC...GCTTCTCGTGAGTAGCTCAGCTACCCTGTCATGCGTATTGATTCCTGAAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CCTTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTATCAGACGTGCACTCATaGTTATCAATGCAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: PCPPQPQCTSGPVSENPLSDVHS*LSMQAV
Trigger: CACTGCCTGCATTGATAACAATGAGTGCACGTCTGA...TAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 90 bp ATTCGTTTATATCAGTGCCTGCTGATGTCATTCCCGGTCCACTGCTaGAGAGTGCCTGATATTCCGCTGAATTCTGTGCAGGACACGGCT +
Preference number: 5 (lower is better)
Translates to: IRLYQCLLMSFPVHC*RVPDIPLNSVQDTA
Trigger: AGCCGTGTCCTGCACAGAATTCAGCGGAATATCAGGCACTCTGCAGCAGTGGACCGGGAATGACATCAGCAGGCACTGATATAAACGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 90 bp CACATTCGTTTATATCAGTGCCTGCTGATGTCATTCCCGGTCCACTaGTGCAGAGTGCCTGATATTCCGCTGAATTCTGTGCAGGACACG +
Preference number: 5 (lower is better)
Translates to: HIRLYQCLLMSFPVH*CRVPDIPLNSVQDT
Trigger: CGTGTCCTGCACAGAATTCAGCGGAATATCAGGCACTCTGCAGCAGTGGACCGGGAATGACATCAGCAGGCACTGATATAAACGAATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 90 bp GTGGCTCCGTTGATGTTGATCTCACAGCGCCCGTCGATGACAGTCTaGCAGCAAGTGCCCTTGATGGTTTCTATGCAGATGGTTTTTGTT +
Preference number: 5 (lower is better)
Translates to: VAPLMLISQRPSMTV*QQVPLMVSMQMVFV
Trigger: AACAAAAACCATCTGCATAGAAACCATCAAGGGCACTTGCTGGCAGACTGTCATCGACGGGCGCTGTGAGATCAACATCAACGGAGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 90 bp GGGACAGAGATTCGCACTCAGCTCACACTCGTTGATGTCAATGCATaGAGAGATGTTTGGGGACAATTGGTGACCAGGAGGACATTCGCA +
Preference number: 5 (lower is better)
Translates to: GTEIRTQLTLVDVNA*RDVWGQLVTRRTFA
Trigger: TGCGAATGTCCTCCTGGTCACCAATTGTCCCCAAACATCTCTGCATGCATTGACATCAACGAGTGTGAGCTGAGTGCGAATCTCTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCCTTCTCTTGGCCCGATaGGCTCTGGTCTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRLLLAR*ALVSFR
Trigger: CCTGAAGGAGACCAGAGCCAATCGGGCCAAGAGAAG...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CCCTCCAGCCTTAATCCACACAAGAACATAAAACCAAGGTGTAAACTAAAATGGCCGCCGCCTCTTCTCTaGGCCCGATTGGCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: PSSLNPHKNIKPRCKLKWPPPLL*ARLALV
Trigger: GACCAGAGCCAATCGGGCCAAGAGAAGAGGCGGCGG...CCATTTTAGTTTACACCTTGGTTTTATGTTCTTGTGTGGATTAAGGCTGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGACACACCTCCCTCCGTaGAGACAGCCACTTTCACAG +
Preference number: 5 (lower is better)
Translates to: SKVSRSEDQRGTVHQMEATHLPP*RQPLSQ
Trigger: CTGTGAAAGTGGCTGTCTCAACGGAGGGAGGTGTGT...CGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGCAACAGCACTGCATTTaGGTTATGGACTGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWQQHCI*VMDCGS
Trigger: GCTGCCACAGTCCATAACCAAAATGCAGTGCTGTTG...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGACAGAGCACAGCTTGTaGAAATCCTCAGTTGACCTG +
Preference number: 5 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVTEHSL*KSSVDL
Trigger: CAGGTCAACTGAGGATTTCAACAAGCTGTGCTCTGT...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGGGGACAGAGCACAGCTaGTTGAAATCCTCAGTTGAC +
Preference number: 5 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWGTEHS*LKSSVD
Trigger: GTCAACTGAGGATTTCAACAAGCTGTGCTCTGTCCC...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCTGCAGATGGTTTTTGTaGGGTCCAGAGTACTTTCAG +
Preference number: 5 (lower is better)
Translates to: LSSPTSVHKWASLRESTTCRWFL*GPEYFQ
Trigger: CTGAAAGTACTCTGGACCCAACAAAAACCATCTGCA...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGACAAATGGGATCAAGTaGACAGATGGTGCACGGGCT +
Preference number: 5 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWTNGIK*TDGARA
Trigger: AGCCCGTGCACCATCTGTCAACTTGATCCCATTTGT...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCAATGAACCCCTGGAGTaGACACACAGGCCGTTCTTG +
Preference number: 5 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVNEPLE*THRPFL
Trigger: CAAGAACGGCCTGTGTGTCAACTCCAGGGGTTCATT...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCATCTTCTTGGTCATGTaGAACAGGAGTTCTCCATCG +
Preference number: 5 (lower is better)
Translates to: LSSPTSVHKWASLRESTTIFLVM*NRSSPS
Trigger: CGATGGAGAACTCCTGTTCAACATGACCAAGAAGAT...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTAAGGAGCCCACGGTATaGACACACTGGCCATTTCTG +
Preference number: 5 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPKEPTV*THWPFL
Trigger: CAGAAATGGCCAGTGTGTCAATACCGTGGGCTCCTT...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGCCATTTCCACAAGGATaGCCCACAGAGCATTCATCG +
Preference number: 5 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWPFPQG*PTEHSS
Trigger: CGATGAATGCTCTGTGGGCAATCCTTGTGGAAATGG...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 90 bp CAGGAGGACATTCGCAGCGATAGCTTCCCTCTGTGTTGTGGCAAATaGCTCCTCGACACAGGAGAGGATCTCTCTGACATTCATCAATAT +
Preference number: 5 (lower is better)
Translates to: QEDIRSDSFPLCCGK*LLDTGEDLSDIHQY
Trigger: ATATTGATGAATGTCAGAGAGATCCTCTCCTGTGTCGAGGAGGCATTTGCCACAACACAGAGGGAAGCTATCGCTGCGAATGTCCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 90 bp TGCAATTATTTCCCCCGTTCACTTGCATGTAGTCTGGAGGACAAATaGAGGTATAGTTGCCAACGGTGTTGTAACAGGTCCCCGGACCAC +
Preference number: 5 (lower is better)
Translates to: CNYFPRSLACSLEDK*RYSCQRCCNRSPDH
Trigger: GTGGTCCGGGGACCTGTTACAACACCGTTGGCAACTATACCTGCATTTGTCCTCCAGACTACATGCAAGTGAACGGGGGAAATAATTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 90 bp AAAGGCAGTAGAAGCTTCCCACGGTGTCGATGCACTGGCCATGACTaGATATGTTCGGGATTTCTTGGCACTCGTTTCGATCGTTGCATT +
Preference number: 5 (lower is better)
Translates to: KGSRSFPRCRCTGHD*ICSGFLGTRFDRCI
Trigger: AATGCAACGATCGAAACGAGTGCCAAGAAATCCCGAACATATGCAGTCATGGCCAGTGCATCGACACCGTGGGAAGCTTCTACTGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 90 bp TATCTTCACACTTGTCATTCTGTAGACTATACCCAGGCGGGCAAATaGATCTGTAGGAGCCATCCAGGTTCTGACAGGTTCCAGGTGCAC +
Preference number: 5 (lower is better)
Translates to: YLHTCHSVDYTQAGK*ICRSHPGSDRFQVH
Trigger: GTGCACCTGGAACCTGTCAGAACCTGGATGGCTCCTACAGATGCATTTGCCCGCCTGGGTATAGTCTACAGAATGACAAGTGTGAAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGACATTCATCCACATCTaGACAAGCTCCAGTGCGGAT +
Preference number: 5 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWTFIHI*TSSSAD
Trigger: ATCCGCACTGGAGCTTGTCAAGATGTGGATGAATGT...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCAACAGCACTGCATTTaGGTTATGGACTGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPQQHCI*VMDCGS
Trigger: GCTGCCACAGTCCATAACCAAAATGCAGTGCTGTTG...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CAGTTTTCAGGAATCAATACGCATGACAGGGTAGCTGAGCTACTCACGAGAAGCAATGCAGCGCCCATTTaGACAGAGATAGCGGACCAG +
Preference number: 5 (lower is better)
Translates to: QFSGINTHDRVAELLTRSNAAPI*TEIADQ
Trigger: CTGGTCCGCTATCTCTGTCAAAATGGGCGCTGCATT...GCTTCTCGTGAGTAGCTCAGCTACCCTGTCATGCGTATTGATTCCTGAAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCAGTTTTTAGGTCAGGTTaGTACACAAATCCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: CPPQPQCTSGPVSENPLPVFRSG*YTNPLG
Trigger: CCCCAAAGGATTTGTGTACAAACCTGACCTAAAAAC...TGGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCGTTCCTGAGCCAGGGCTGTTCTaGCAGACTCCATTAATGCAA +
Preference number: 5 (lower is better)
Translates to: FQDLKTNAEQSIRWKRVPEPGLF*QTPLMQ
Trigger: TTGCATTAATGGAGTCTGCAAGAACAGCCCTGGCTC...AGGAACGCGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCTGCCAGCAAGTGCCCTaGATGGTTTCTATGCAGATG +
Preference number: 5 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVCQQVP*MVSMQM
Trigger: CATCTGCATAGAAACCATCAAGGGCACTTGCTGGCA...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCACAAATGGGATCAAGTaGACAGATGGTGCACGGGCT +
Preference number: 5 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVTNGIK*TDGARA
Trigger: AGCCCGTGCACCATCTGTCAACTTGATCCCATTTGT...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGACACACAGGCCGTTCTaGCATACTCCCGGGAACACT +
Preference number: 5 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGTHRPF*HTPGNT
Trigger: AGTGTTCCCGGGAGTATGCAAGAACGGCCTGTGTGT...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCGTTCCTTGCATGCAGAGATGTTaGGGGACAATTGGTGACCAG +
Preference number: 5 (lower is better)
Translates to: FQDLKTNAEQSIRWKRVPCMQRC*GTIGDQ
Trigger: CTGGTCACCAATTGTCCCCAAACATCTCTGCATGCA...AGGAACGCGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CCTTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTATCACAGATATTGGGGTaGTCTTCACACTCATCAATG +
Preference number: 5 (lower is better)
Translates to: PCPPQPQCTSGPVSENPLSQILG*SSHSSM
Trigger: CATTGATGAGTGTGAAGACAACCCCAATATCTGTGA...TAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCTCACAGATATTGGGGTaGTCTTCACACTCATCAATG +
Preference number: 5 (lower is better)
Translates to: LSSPTSVHKWASLRESTTSQILG*SSHSSM
Trigger: CATTGATGAGTGTGAAGACAACCCCAATATCTGTGA...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTGCAACAGCACATCTTCTaGGTCATGTTGAACAGGAGT +
Preference number: 5 (lower is better)
Translates to: FGVLHMLCDGGCGGDPLVQQHIF*VMLNRS
Trigger: ACTCCTGTTCAACATGACCAAGAAGATGTGCTGTTG...CACCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGAAGGAGCCCACGGTATaGACACACTGGCCATTTCTG +
Preference number: 5 (lower is better)
Translates to: SKVSRSEDQRGTVHQMEAKEPTV*THWPFL
Trigger: CAGAAATGGCCAGTGTGTCAATACCGTGGGCTCCTT...CGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCACTCGTCAAGATCTTaGCAGCTCCTTCCATCCTCT +
Preference number: 5 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPHSSRS*QLLPSS
Trigger: AGAGGATGGAAGGAGCTGCAAAGATCTTGACGAGTG...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTTTCTGGCAAACACCCTaGGACCCACACAGGTTGATA +
Preference number: 5 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPFWQTP*DPHRLI
Trigger: TATCAACCTGTGTGGGTCCAAGGGTGTTTGCCAGAA...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCGTTCTGGCAGCCATGTaGACAGCGGTGGTTACCCTC +
Preference number: 5 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSVLAAM*TAVVTL
Trigger: GAGGGTAACCACCGCTGTCAACATGGCTGCCAGAAC...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 90 bp CCCAGGTGTCTCACACTCATTGATATCTTTGCAGTAGCGGCCATCTaGTGCCAGTTGGAACCCAGGTTTGCAAATACACTTGAAACTGCC +
Preference number: 5 (lower is better)
Translates to: PRCLTLIDIFAVAAI*CQLEPRFANTLETA
Trigger: GGCAGTTTCAAGTGTATTTGCAAACCTGGGTTCCAACTGGCATCAGATGGCCGCTACTGCAAAGATATCAATGAGTGTGAGACACCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 90 bp AGCTTCCTGGAGTGTTCTGGCAAACACCCTTGGACCCACACAGGTTaGTATCAGACGTGCACTCATTGTTATCAATGCAGGCAGTGTGAT +
Preference number: 5 (lower is better)
Translates to: SFLECSGKHPWTHTG*YQTCTHCYQCRQCD
Trigger: ATCACACTGCCTGCATTGATAACAATGAGTGCACGTCTGATATCAACCTGTGTGGGTCCAAGGGTGTTTGCCAGAACACTCCAGGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 90 bp TCACACCTACACTTGAAGCTGCCAATGGTGTTCCTGCACTTGCCGTaGGTACAGAGGCTGGGTATCATCTTGCACTCATTGATATCTTTG +
Preference number: 5 (lower is better)
Translates to: SHLHLKLPMVFLHLP*VQRLGIILHSLISL
Trigger: CAAAGATATCAATGAGTGCAAGATGATACCCAGCCTCTGTACCCACGGCAAGTGCAGGAACACCATTGGCAGCTTCAAGTGTAGGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCGTTCCTCCCTGGCACATCTGGTaGCTTACCACAGTAAAACAT +
Preference number: 5 (lower is better)
Translates to: FQDLKTNAEQSIRWKRVPPWHIW*LTTVKH
Trigger: ATGTTTTACTGTGGTAAGCAACCAGATGTGCCAGGG...AGGAACGCGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTACATTCATCCACATCTaGACAAGCTCCAGTGCGGAT +
Preference number: 5 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPTFIHI*TSSSAD
Trigger: ATCCGCACTGGAGCTTGTCAAGATGTGGATGAATGT...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCGTTCCTACAGAGCACAGCTTGTaGAAATCCTCAGTTGACCTG +
Preference number: 5 (lower is better)
Translates to: FQDLKTNAEQSIRWKRVPTEHSL*KSSVDL
Trigger: CAGGTCAACTGAGGATTTCAACAAGCTGTGCTCTGT...AGGAACGCGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGAAGCTGCCGTCTGTGTaGATACAGCGACCATTGTTG +
Preference number: 5 (lower is better)
Translates to: SKVSRSEDQRGTVHQMEAKLPSV*IQRPLL
Trigger: CAACAATGGTCGCTGTATCAACACAGACGGCAGCTT...CGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCAATGAACCCCTGGAGTaGACACACAGGCCGTTCTTG +
Preference number: 5 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRNEPLE*THRPFL
Trigger: CAAGAACGGCCTGTGTGTCAACTCCAGGGGTTCATT...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CAGTTTTCAGGAATCAATACGCATGACAGGGTAGCTGAGCTACTCACGAGAAGCCTCAGCTCACACTCGTaGATGTCAATGCATGCAGAG +
Preference number: 5 (lower is better)
Translates to: QFSGINTHDRVAELLTRSLSSHS*MSMHAE
Trigger: CTCTGCATGCATTGACATCAACGAGTGTGAGCTGAG...GCTTCTCGTGAGTAGCTCAGCTACCCTGTCATGCGTATTGATTCCTGAAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGCAACAGCACATCTTCTaGGTCATGTTGAACAGGAGT +
Preference number: 5 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWQQHIF*VMLNRS
Trigger: ACTCCTGTTCAACATGACCAAGAAGATGTGCTGTTG...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCGTTCCTTCTGGACACAGACATTaGAAGCTACCCTCAGTGTTG +
Preference number: 5 (lower is better)
Translates to: FQDLKTNAEQSIRWKRVPSGHRH*KLPSVL
Trigger: CAACACTGAGGGTAGCTTCAAATGTCTGTGTCCAGA...AGGAACGCGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGGTTCTTACACTCCATTaGCTTCTCAGTACAGTCGTG +
Preference number: 5 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWVLTLH*LLSTVV
Trigger: CACGACTGTACTGAGAAGCAAATGGAGTGTAAGAAC...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGGTGACGGGGTTCCTGTaGCTTGAGCCAATCTGGCAC +
Preference number: 5 (lower is better)
Translates to: FENLLAPNRQQKPTACTRVTGFL*LEPIWH
Trigger: GTGCCAGATTGGCTCAAGCAACAGGAACCCCGTCAC...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGTCAATATCTGCTCCGTaGGTCATGAATCCTCGGCCG +
Preference number: 5 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGSISAP*VMNPRP
Trigger: CGGCCGAGGATTCATGACCAACGGAGCAGATATTGA...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTACCCTCCCTTCTGTGTTTTaGCATATAAAATTGCAGGGT +
Preference number: 5 (lower is better)
Translates to: LSSPTSVHKWASLRESTTLPSVF*HIKLQG
Trigger: ACCCTGCAATTTTATATGCAAAAACACAGAAGGGAG...GGTAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCGCTCCTTCCATCCTCTaGCAGAATGTAGCCCTTCGG +
Preference number: 5 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSAPSIL*QNVALR
Trigger: CCGAAGGGCTACATTCTGCAAGAGGATGGAAGGAGC...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGACACTCATTGATGTCTaGGCAGCCTCCACTGAACTG +
Preference number: 5 (lower is better)
Translates to: SKVSRSEDQRGTVHQMEATLIDV*AASTEL
Trigger: CAGTTCAGTGGAGGCTGCCAAGACATCAATGAGTGT...CGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGATGAGCCACACTCATaGATGTCTTGGCAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRDEPHS*MSWQPP
Trigger: TGGAGGCTGCCAAGACATCAATGAGTGTGGCTCATC...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CCTTGTCCTCCCCAACCTCAGTGCACAAGTGGGCCAGTCTCAGAGAATCCACTATCAATCAAGTATCTGTaGTGGTTCATCAGAGTTGTG +
Preference number: 5 (lower is better)
Translates to: PCPPQPQCTSGPVSENPLSIKYL*WFIRVV
Trigger: CACAACTCTGATGAACCACAACAGATACTTGATTGA...TAGTGGATTCTCTGAGACTGGCCCACTTGTGCACTGAGGTTGGGGAGGACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 90 bp GAAGCTACCCTCAGTGTTGCTGCAGGTCCCCAAGGCACAGATTTCTaGCTCTTCAACACACTCATCAATATCTTCACACTTGTCATTCTG +
Preference number: 5 (lower is better)
Translates to: EATLSVAAGPQGTDF*LFNTLINIFTLVIL
Trigger: CAGAATGACAAGTGTGAAGATATTGATGAGTGTGTTGAAGAGCCAGAAATCTGTGCCTTGGGGACCTGCAGCAACACTGAGGGTAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGGGCAAGTGCACATATTaGGCCTCGAGCAGAATCCAT +
Preference number: 5 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGGKCTY*ASSRIH
Trigger: ATGGATTCTGCTCGAGGCCAAATATGTGCACTTGCC...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp ACTGAGTACTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATGCAAGCACACCGATTaGGGGCCACACACCTCCCTC +
Preference number: 5 (lower is better)
Translates to: TEYLAIWFLTRVFITVHQCKHTD*GPHTSL
Trigger: GAGGGAGGTGTGTGGCCCCAAATCGGTGTGCTTGCA...TTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAGTACTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTTTGTACACAAATCCTTaGGGGCAGGTGCAGACAAAA +
Preference number: 5 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPLYTNP*GQVQTK
Trigger: TTTTGTCTGCACCTGCCCCAAAGGATTTGTGTACAA...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCTCCAAAGTCATTCCATaGGGACACTCGCACTTGAAT +
Preference number: 5 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVSKVIP*GHSHLN
Trigger: ATTCAAGTGCGAGTGTCCCAATGGAATGACTTTGGA...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AGTGATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTTCCAAAGTCATTCCATaGGGACACTCGCACTTGAAT +
Preference number: 5 (lower is better)
Translates to: SDFGVLHMLCDGGCGGDPSKVIP*GHSHLN
Trigger: ATTCAAGTGCGAGTGTCCCAATGGAATGACTTTGGA...AGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAATCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp GCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCGAATGGTTTCTGGATTaGGGTGATGAACACTTCCCA +
Preference number: 5 (lower is better)
Translates to: ACTRRSKVSRSEDQRGTVEWFLD*GDEHFP
Trigger: TGGGAAGTGTTCATCACCCAAATCCAGAAACCATTC...GACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCCAGCAGCACTCCTGCTaGGAATGGTTTCTGGATTTG +
Preference number: 5 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRQQHSC*EWFLDL
Trigger: CAAATCCAGAAACCATTCCAAGCAGGAGTGCTGCTG...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGCAGACATCAGGTTCTTaGCATTCGTCCATATCAACT +
Preference number: 5 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWQTSGS*HSSIST
Trigger: AGTTGATATGGACGAATGCAAAGAACCTGATGTCTG...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACTCAATATCTGCTCCGTaGGTCATGAATCCTCGGCCG +
Preference number: 5 (lower is better)
Translates to: QQKPTACTRRSKVSRSEDSISAP*VMNPRP
Trigger: CGGCCGAGGATTCATGACCAACGGAGCAGATATTGA...GTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCGTTCCTATAAAATTGCAGGGTTaGGGAGCCTGGTTGCATTCA +
Preference number: 5 (lower is better)
Translates to: FQDLKTNAEQSIRWKRVPIKLQG*GAWLHS
Trigger: TGAATGCAACCAGGCTCCCAAACCCTGCAATTTTAT...AGGAACGCGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCGTTCCTTTGACATGGGAAATATaGAAAGCAAAGCTAGCCGGC +
Preference number: 5 (lower is better)
Translates to: FQDLKTNAEQSIRWKRVPLTWEI*KAKLAG
Trigger: GCCGGCTAGCTTTGCTTTCAATATTTCCCATGTCAA...AGGAACGCGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCTTGATACAGCGACCATaGTTGCAGATCCGGCCATTC +
Preference number: 5 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSLIQRP*LQIRPF
Trigger: GAATGGCCGGATCTGCAACAATGGTCGCTGTATCAA...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGTTCAAGGTGGCTCCGTaGATGTTGATCTCACAGCGC +
Preference number: 5 (lower is better)
Translates to: FENLLAPNRQQKPTACTRFKVAP*MLISQR
Trigger: GCGCTGTGAGATCAACATCAACGGAGCCACCTTGAA...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCCTGTCACACCTACACTaGAAGCTGCCAATGGTGTTC +
Preference number: 5 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSLSHLH*KLPMVF
Trigger: GAACACCATTGGCAGCTTCAAGTGTAGGTGTGACAG...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCTGTCACACCTACACTaGAAGCTGCCAATGGTGTTC +
Preference number: 5 (lower is better)
Translates to: QQKPTACTRRSKVSRSEDLSHLH*KLPMVF
Trigger: GAACACCATTGGCAGCTTCAAGTGTAGGTGTGACAG...GTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGCTCCCGTCAGAGTTaGTGCAGAAGGTCTCACAAC +
Preference number: 5 (lower is better)
Translates to: FENLLAPNRQQKPTACTRSSRQS*CRRSHN
Trigger: GTTGTGAGACCTTCTGCACAAACTCTGACGGGAGCT...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGGCATGTCTGCCACAGTaGTGTGCTCCGATCTCACAT +
Preference number: 5 (lower is better)
Translates to: FENLLAPNRQQKPTACTRACLPQ*CAPISH
Trigger: ATGTGAGATCGGAGCACACAACTGTGGCAGACATGC...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGCTCCCGGCTGTATTaGTGCATACAGCATGTCTGC +
Preference number: 5 (lower is better)
Translates to: FENLLAPNRQQKPTACTRSSRLY*CIQHVC
Trigger: GCAGACATGCTGTATGCACAAATACAGCCGGGAGCT...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCTGGTTACAGCGACAGTaGAAGGAGCCAATCGTGTTT +
Preference number: 5 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRWLQRQ*KEPIVF
Trigger: AAACACGATTGGCTCCTTCAACTGTCGCTGTAACCA...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGTCTGGACACAGACATTaGAAGCTACCCTCAGTGTTG +
Preference number: 5 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGSGHRH*KLPSVL
Trigger: CAACACTGAGGGTAGCTTCAAATGTCTGTGTCCAGA...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CCCTCCAGCCTTAATCCACACAAGAACATAAAACCAAGGTGTAAACTAAAATGGGCTCCTTCCATCCTCTaGCAGAATGTAGCCCTTCGG +
Preference number: 5 (lower is better)
Translates to: PSSLNPHKNIKPRCKLKWAPSIL*QNVALR
Trigger: CCGAAGGGCTACATTCTGCAAGAGGATGGAAGGAGC...CCATTTTAGTTTACACCTTGGTTTTATGTTCTTGTGTGGATTAAGGCTGGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CCCTCCAGCCTTAATCCACACAAGAACATAAAACCAAGGTGTAAACTAAAATGGAACCCAGGAGGGCATTaGCATGTGAAGCCACCGATG +
Preference number: 5 (lower is better)
Translates to: PSSLNPHKNIKPRCKLKWNPGGH*HVKPPM
Trigger: CATCGGTGGCTTCACATGCAAATGCCCTCCTGGGTT...CCATTTTAGTTTACACCTTGGTTTTATGTTCTTGTGTGGATTAAGGCTGGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp ACTGAGTACTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATCTGGGGACAGTGAGTaGTCGTCCATCTCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: TEYLAIWFLTRVFITVHQSGDSE*SSISLL
Trigger: CAGCAGCGAGATGGACGACAACTCACTGTCCCCAGA...TTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAGTACTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp ATTTTGGCGTATTGCACATGCTGTGTGATGGAGGATGCGGTGGTGATCCTCTGGTCTAGGATTCGGACCTaGTTATTGACATGGGAAATA +
Preference number: 5 (lower is better)
Translates to: ILAYCTCCVMEDAVVILWSRIRT*LLTWEI
Trigger: TATTTCCCATGTCAATAACAAGGTCCGAATCCTAGA...CCAGAGGATCACCACCGCATCCTCCATCACACAGCATGTGCAATACGCCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 90 bp CACACTCATTTATGTCTAAGCACATGGTCTGATCCACATTTGTTTTaGAGCCAGTGTGACAAAGGCAGTAGAAGCTTCCCACGGTGTCGA +
Preference number: 5 (lower is better)
Translates to: HTHLCLSTWSDPHLF*SQCDKGSRSFPRCR
Trigger: TCGACACCGTGGGAAGCTTCTACTGCCTTTGTCACACTGGCTTCAAAACAAATGTGGATCAGACCATGTGCTTAGACATAAATGAGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 90 bp TTAAAGAAGCCATCTTCATTTCCAGATTCAATCAAGTATCTGTTGTaGTTCATCAGAGTTGTGAGGGCCGGCAGGAGCTCTAGGATTCGG +
Preference number: 5 (lower is better)
Translates to: LKKPSSFPDSIKYLL*FIRVVRAGRSSRIR
Trigger: CCGAATCCTAGAGCTCCTGCCGGCCCTCACAACTCTGATGAACCACAACAGATACTTGATTGAATCTGGAAATGAAGATGGCTTCTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGGACACTTCATTAAATTaGTGTCCAGCAGGGCATTTG +
Preference number: 5 (lower is better)
Translates to: SKVSRSEDQRGTVHQMEADTSLN*CPAGHL
Trigger: CAAATGCCCTGCTGGACACAAATTTAATGAAGTGTC...CGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGCAACAGCATTCCGATTaGGTAACAGCACCAAACAAC +
Preference number: 5 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGQQHSD*VTAPNN
Trigger: GTTGTTTGGTGCTGTTACCAAATCGGAATGCTGTTG...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGTTGTACACAAATCCTTaGGGGCAGGTGCAGACAAAA +
Preference number: 5 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGLYTNP*GQVQTK
Trigger: TTTTGTCTGCACCTGCCCCAAAGGATTTGTGTACAA...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGGTTTTTAGGTCAGGTTaGTACACAAATCCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: SKVSRSEDQRGTVHQMEAVFRSG*YTNPLG
Trigger: CCCCAAAGGATTTGTGTACAAACCTGACCTAAAAAC...CGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CCCTCCAGCCTTAATCCACACAAGAACATAAAACCAAGGTGTAAACTAAAATGGAGCTCCCGTCAGAGTTaGTGCAGAAGGTCTCACAAC +
Preference number: 5 (lower is better)
Translates to: PSSLNPHKNIKPRCKLKWSSRQS*CRRSHN
Trigger: GTTGTGAGACCTTCTGCACAAACTCTGACGGGAGCT...CCATTTTAGTTTACACCTTGGTTTTATGTTCTTGTGTGGATTAAGGCTGGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGTTCAGGTCACACTCATaGACATCCACACAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGFRSHS*TSTQVF
Trigger: GAAGACTTGTGTGGATGTCAATGAGTGTGACCTGAA...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGATCTTCTTGGTCATGTaGAACAGGAGTTCTCCATCG +
Preference number: 5 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGIFLVM*NRSSPS
Trigger: CGATGGAGAACTCCTGTTCAACATGACCAAGAAGAT...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACCAACGCAAGCTGCCAACCATGTaGATGCACACTCCATTTTCA +
Preference number: 5 (lower is better)
Translates to: KPTACTRRSKVSRSEDQRKLPTM*MHTPFS
Trigger: TGAAAATGGAGTGTGCATCAACATGGTTGGCAGCTT...GCGTTGGTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCAGACATCAGGTTCTTaGCATTCGTCCATATCAACT +
Preference number: 5 (lower is better)
Translates to: SKVSRSEDQRGTVHQMEAQTSGS*HSSIST
Trigger: AGTTGATATGGACGAATGCAAAGAACCTGATGTCTG...CGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGGTTCTTACACTCCATTaGCTTCTCAGTACAGTCGTG +
Preference number: 5 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGVLTLH*LLSTVV
Trigger: CACGACTGTACTGAGAAGCAAATGGAGTGTAAGAAC...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCGGTTTGGGAGCCTGGTaGCATTCATTCAGATCTACA +
Preference number: 5 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSGLGAW*HSFRST
Trigger: TGTAGATCTGAATGAATGCAACCAGGCTCCCAAACC...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGATAAAATTGCAGGGTTaGGGAGCCTGGTTGCATTCA +
Preference number: 5 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGIKLQG*GAWLHS
Trigger: TGAATGCAACCAGGCTCCCAAACCCTGCAATTTTAT...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGCACTCGTCAAGATCTTaGCAGCTCCTTCCATCCTCT +
Preference number: 5 (lower is better)
Translates to: FENLLAPNRQQKPTACTRHSSRS*QLLPSS
Trigger: AGAGGATGGAAGGAGCTGCAAAGATCTTGACGAGTG...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGTTCTGGCAAACACCCTaGGACCCACACAGGTTGATA +
Preference number: 5 (lower is better)
Translates to: FENLLAPNRQQKPTACTRFWQTP*DPHRLI
Trigger: TATCAACCTGTGTGGGTCCAAGGGTGTTTGCCAGAA...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 90 bp CTCCTGGCACTCATCGATGTCTTCCAATATAACGGTGATGGGATTTaGACGAAAACCTTCTCCTCCAGGGCAAAGAATTTTATACTCAGA +
Preference number: 5 (lower is better)
Translates to: LLALIDVFQYNGDGI*TKTFSSRAKNFILR
Trigger: TCTGAGTATAAAATTCTTTGCCCTGGAGGAGAAGGTTTTCGTCCAAATCCCATCACCGTTATATTGGAAGACATCGATGAGTGCCAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CCCTCCAGCCTTAATCCACACAAGAACATAAAACCAAGGTGTAAACTAAAATGGTTGATACAGCGACCATaGTTGCAGATCCGGCCATTC +
Preference number: 5 (lower is better)
Translates to: PSSLNPHKNIKPRCKLKWLIQRP*LQIRPF
Trigger: GAATGGCCGGATCTGCAACAATGGTCGCTGTATCAA...CCATTTTAGTTTACACCTTGGTTTTATGTTCTTGTGTGGATTAAGGCTGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CAGTTTTCAGGAATCAATACGCATGACAGGGTAGCTGAGCTACTCACGAGAAGCTTTCGACATTGTCCATaGTCACAAAGTAGACTGTTC +
Preference number: 5 (lower is better)
Translates to: QFSGINTHDRVAELLTRSFRHCP*SQSRLF
Trigger: GAACAGTCTACTTTGTGACAATGGACAATGTCGAAA...GCTTCTCGTGAGTAGCTCAGCTACCCTGTCATGCGTATTGATTCCTGAAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGAGAAGCTGCAGATGGTTTTTGTaGGGTCCAGAGTACTTTCAG +
Preference number: 5 (lower is better)
Translates to: NLLAPNRQQKPTACTRRSCRWFL*GPEYFQ
Trigger: CTGAAAGTACTCTGGACCCAACAAAAACCATCTGCA...GCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACTTCAGGTCACACTCATaGACATCCACACAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: QQKPTACTRRSKVSRSEDFRSHS*TSTQVF
Trigger: GAAGACTTGTGTGGATGTCAATGAGTGTGACCTGAA...GTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGCCAACTCCAATTTCATaGCTGCAGGCTGTATCTCCA +
Preference number: 5 (lower is better)
Translates to: FENLLAPNRQQKPTACTRPTPIS*LQAVSP
Trigger: TGGAGATACAGCCTGCAGCAATGAAATTGGAGTTGG...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CCCTCCAGCCTTAATCCACACAAGAACATAAAACCAAGGTGTAAACTAAAATGGCAGCAGCACTCCTGCTaGGAATGGTTTCTGGATTTG +
Preference number: 5 (lower is better)
Translates to: PSSLNPHKNIKPRCKLKWQQHSC*EWFLDL
Trigger: CAAATCCAGAAACCATTCCAAGCAGGAGTGCTGCTG...CCATTTTAGTTTACACCTTGGTTTTATGTTCTTGTGTGGATTAAGGCTGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AGCAAAGTTTCAAGATCTGAAGACCAACGCGGAACAGTCCATCAGATGGAAGCGCTCCCTTCTGTGTTTTaGCATATAAAATTGCAGGGT +
Preference number: 5 (lower is better)
Translates to: SKVSRSEDQRGTVHQMEALPSVF*HIKLQG
Trigger: ACCCTGCAATTTTATATGCAAAAACACAGAAGGGAG...CGCTTCCATCTGATGGACTGTTCCGCGTTGGTCTTCAGATCTTGAAACTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CAGTTTTCAGGAATCAATACGCATGACAGGGTAGCTGAGCTACTCACGAGAAGCACCCCTTCTTTCTGGTaGATTTTAAAGAAGCCATCT +
Preference number: 5 (lower is better)
Translates to: QFSGINTHDRVAELLTRSTPSFW*ILKKPS
Trigger: AGATGGCTTCTTTAAAATCAACCAGAAAGAAGGGGT...GCTTCTCGTGAGTAGCTCAGCTACCCTGTCATGCGTATTGATTCCTGAAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATAAATCTAACACACCTCCCTCCGTaGAGACAGCCACTTTCACAG +
Preference number: 5 (lower is better)
Translates to: LGNLVPNSCLYYSASINLTHLPP*RQPLSQ
Trigger: CTGTGAAAGTGGCTGTCTCAACGGAGGGAGGTGTGT...TAGATTTATTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp ACTGAGTACTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATGCATGCAGAGATGTTaGGGGACAATTGGTGACCAG +
Preference number: 5 (lower is better)
Translates to: TEYLAIWFLTRVFITVHQCMQRC*GTIGDQ
Trigger: CTGGTCACCAATTGTCCCCAAACATCTCTGCATGCA...TTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAGTACTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp TTTGAGAATTTACTAGCACCAAACAGACAACAGAAACCTACTGCTTGCACTCGGGAATGGTTTCTGGATTaGGGTGATGAACACTTCCCA +
Preference number: 5 (lower is better)
Translates to: FENLLAPNRQQKPTACTREWFLD*GDEHFP
Trigger: TGGGAAGTGTTCATCACCCAAATCCAGAAACCATTC...CCGAGTGCAAGCAGTAGGTTTCTGTTGTCTGTTTGGTGCTAGTAAATTCTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACTTTTTGCATATAAAATaGCAGGGTTTGGGAGCCTGG +
Preference number: 5 (lower is better)
Translates to: QQKPTACTRRSKVSRSEDFLHIK*QGLGAW
Trigger: CCAGGCTCCCAAACCCTGCAATTTTATATGCAAAAA...GTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp AACCTCAGCGGATATTCATGTCCCAGTTTTCAGGAATCAATACGCATGACAGGGACCCCTTCTTTCTGGTaGATTTTAAAGAAGCCATCT +
Preference number: 5 (lower is better)
Translates to: NLSGYSCPSFQESIRMTGTPSFW*ILKKPS
Trigger: AGATGGCTTCTTTAAAATCAACCAGAAAGAAGGGGT...CCCTGTCATGCGTATTGATTCCTGAAAACTGGGACATGAATATCCGCTGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CCCTCCAGCCTTAATCCACACAAGAACATAAAACCAAGGTGTAAACTAAAATGGAAGCTGCCAACCATGTaGATGCACACTCCATTTTCA +
Preference number: 5 (lower is better)
Translates to: PSSLNPHKNIKPRCKLKWKLPTM*MHTPFS
Trigger: TGAAAATGGAGTGTGCATCAACATGGTTGGCAGCTT...CCATTTTAGTTTACACCTTGGTTTTATGTTCTTGTGTGGATTAAGGCTGGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp ACTGAGTACTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAAGGTTTGGGAGCCTGGTaGCATTCATTCAGATCTACA +
Preference number: 5 (lower is better)
Translates to: TEYLAIWFLTRVFITVHQGLGAW*HSFRST
Trigger: TGTAGATCTGAATGAATGCAACCAGGCTCCCAAACC...TTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAGTACTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CAACAGAAACCTACTGCTTGCACTCGGAGAAGCAAAGTTTCAAGATCTGAAGACTCTAGGATTCGGACCTaGTTATTGACATGGGAAATA +
Preference number: 5 (lower is better)
Translates to: QQKPTACTRRSKVSRSEDSRIRT*LLTWEI
Trigger: TATTTCCCATGTCAATAACAAGGTCCGAATCCTAGA...GTCTTCAGATCTTGAAACTTTGCTTCTCCGAGTGCAAGCAGTAGGTTTCTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 90 bp CTCACATTCATTGATATCTGTACAGCCCGTTTTTCCTTTCTTCCCTaGATATCCCATATCACAGTGGCAGATGAACGAGCCTTTAGTATT +
Preference number: 5 (lower is better)
Translates to: LTFIDICTARFSFLP*ISHITVADERAFSI
Trigger: AATACTAAAGGCTCGTTCATCTGCCACTGTGATATGGGATATTCAGGGAAGAAAGGAAAAACGGGCTGTACAGATATCAATGAATGTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATAAATCTAAAGCTGCCGTCTGTGTaGATACAGCGACCATTGTTG +
Preference number: 5 (lower is better)
Translates to: LGNLVPNSCLYYSASINLKLPSV*IQRPLL
Trigger: CAACAATGGTCGCTGTATCAACACAGACGGCAGCTT...TAGATTTATTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CCCTCCAGCCTTAATCCACACAAGAACATAAAACCAAGGTGTAAACTAAAATGGTTTTTGCATATAAAATaGCAGGGTTTGGGAGCCTGG +
Preference number: 5 (lower is better)
Translates to: PSSLNPHKNIKPRCKLKWFLHIK*QGLGAW
Trigger: CCAGGCTCCCAAACCCTGCAATTTTATATGCAAAAA...CCATTTTAGTTTACACCTTGGTTTTATGTTCTTGTGTGGATTAAGGCTGGAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CCCTCCAGCCTTAATCCACACAAGAACATAAAACCAAGGTGTAAACTAAAATGGTTTCGACATTGTCCATaGTCACAAAGTAGACTGTTC +
Preference number: 5 (lower is better)
Translates to: PSSLNPHKNIKPRCKLKWFRHCP*SQSRLF
Trigger: GAACAGTCTACTTTGTGACAATGGACAATGTCGAAA...CCATTTTAGTTTACACCTTGGTTTTATGTTCTTGTGTGGATTAAGGCTGGAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATAAATCTACTATGCAGATGGTTTTaGTTGGGTCCAGAGTACTTT +
Preference number: 5 (lower is better)
Translates to: LGNLVPNSCLYYSASINLLCRWF*LGPEYF
Trigger: AAAGTACTCTGGACCCAACAAAAACCATCTGCATAG...TAGATTTATTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS-3UTR CAA 90 bp CTTGGCAATTTGGTTCCTAACTCGTGTCTTTATTACAGTGCATCAATAAATCTATCAATCAAGTATCTGTaGTGGTTCATCAGAGTTGTG +
Preference number: 5 (lower is better)
Translates to: LGNLVPNSCLYYSASINLSIKYL*WFIRVV
Trigger: CACAACTCTGATGAACCACAACAGATACTTGATTGA...TAGATTTATTGATGCACTGTAATAAAGACACGAGTTAGGAACCAAATTGCCAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 72 bp CTCGGCCGTGGGGACAGAGCTTCTTGTAAGCCACTGTaGCCTCGAAAGGGCAGATCTCACAGTGGGGTCCCC +
Preference number: 6 (lower is better)
Translates to: LGRGDRASCKPL*PRKGRSHSGVP
Trigger: GGGGACCCCACTGTGAGATCTGCCCTTTCGAGGGCACAGTGGCTTACAAGAAGCTCTGTCCCCACGGCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 90 bp CCAAGGGAGGAGCAGCACTCGGACTTCAAGGTGGCTCCGTTGATGTaGATCTCACAGCGCCCGTCGATGACAGTCTGCCAGCAAGTGCCC +
Preference number: 6 (lower is better)
Translates to: PREEQHSDFKVAPLM*ISQRPSMTVCQQVP
Trigger: GGGCACTTGCTGGCAGACTGTCATCGACGGGCGCTGTGAGATCAACATCAACGGAGCCACCTTGAAGTCCGAGTGCTGCTCCTCCCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 72 bp ACCCGTCCTGGATGTCGGAGGCATCCGTTTCGTTCGTaGTTCTCCGTTTCCGGCCTCGTTTTGGGTAGCCGT +
Preference number: 6 (lower is better)
Translates to: TRPGCRRHPFRS*FSVSGLVLGSR
Trigger: ACGGCTACCCAAAACGAGGCCGGAAACGGAGAAGCACGAACGAAACGGATGCCTCCGACATCCAGGACGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp GGGTCCAGTAAAGCCGTACGTGCAAGCACACCGATTTaGGGCCACACACCTCCCTCCGTTGAGACAGCCACT +
Preference number: 6 (lower is better)
Translates to: GSSKAVRASTPI*GHTPPSVETAT
Trigger: AGTGGCTGTCTCAACGGAGGGAGGTGTGTGGCCCCAAATCGGTGTGCTTGCACGTACGGCTTTACTGGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp CCTGATGGGACACATCTCGGGAGCAACAGTAACCCCTaGAGACCAGCACCGGCCAAGATCGCAACAGCACTG +
Preference number: 6 (lower is better)
Translates to: PDGTHLGSNSNP*RPAPAKIATAL
Trigger: CAGTGCTGTTGCGATCTTGGCCGGTGCTGGTCTCCAGGGGTTACTGTTGCTCCCGAGATGTGTCCCATCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp AGGAACGGGCTGAACTGGAGGAAGGGGGCCAATGGGTaGGGGAGGATATTCTGGTCTCCCGGGAATTACCAG +
Preference number: 6 (lower is better)
Translates to: RNGLNWRKGANG*GRIFWSPGNYQ
Trigger: CTGGTAATTCCCGGGAGACCAGAATATCCTCCCCCACCCATTGGCCCCCTTCCTCCAGTTCAGCCCGTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp AGGGGCAGATCTGGCGGAAAGCCTCATCTGGCTCAGTaGGGCACAACTCACAAGGATCTCCCCAGCCTTCTC +
Preference number: 6 (lower is better)
Translates to: RGRSGGKPHLAQ*GTTHKDLPSLL
Trigger: GAGAAGGCTGGGGAGATCCTTGTGAGTTGTGCCCCACTGAGCCAGATGAGGCTTTCCGCCAGATCTGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp GGGCCCACAATGATCCCACTTCCAAAGGGGCAGATCTaGCGGAAAGCCTCATCTGGCTCAGTGGGGCACAAC +
Preference number: 6 (lower is better)
Translates to: GPTMIPLPKGQI*RKASSGSVGHN
Trigger: GTTGTGCCCCACTGAGCCAGATGAGGCTTTCCGCCAGATCTGCCCCTTTGGAAGTGGGATCATTGTGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 90 bp GCAGCACCAAGGGAGGAGCAGCACTCGGACTTCAAGGTGGCTCCGTaGATGTTGATCTCACAGCGCCCGTCGATGACAGTCTGCCAGCAA +
Preference number: 6 (lower is better)
Translates to: AAPREEQHSDFKVAP*MLISQRPSMTVCQQ
Trigger: TTGCTGGCAGACTGTCATCGACGGGCGCTGTGAGATCAACATCAACGGAGCCACCTTGAAGTCCGAGTGCTGCTCCTCCCTTGGTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 72 bp CATCGCTGCAGCTGCCCCCATTCATACAGCGGATGCTaGAGTGTTGGATGGATCTGGAGCCACAGGAAGGAG +
Preference number: 6 (lower is better)
Translates to: HRCSCPHSYSGC*SVGWIWSHRKE
Trigger: CTCCTTCCTGTGGCTCCAGATCCATCCAACACTGCAGCATCCGCTGTATGAATGGGGGCAGCTGCAGCGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 72 bp GGTCATCGCTGCAGCTGCCCCCATTCATACAGCGGATaGTGCAGTGTTGGATGGATCTGGAGCCACAGGAAG +
Preference number: 6 (lower is better)
Translates to: GHRCSCPHSYSG*CSVGWIWSHRK
Trigger: CTTCCTGTGGCTCCAGATCCATCCAACACTGCAGCATCCGCTGTATGAATGGGGGCAGCTGCAGCGATGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 72 bp ACCCTTTACCACAAATGGGATCAAGTTGACAGATGGTaGACGGGCTCCCCCACGCAGCACCAAGGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: TLYHKWDQVDRW*TGSPTQHQGRS
Trigger: GCTCCTCCCTTGGTGCTGCGTGGGGGAGCCCGTGCACCATCTGTCAACTTGATCCCATTTGTGGTAAAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 72 bp ACTCATTCTCATCTATGCAGCCCTCTCCATCGGGTCTaGGCTGGTACCCAGGGCCGCAGATGCACATGTAGG +
Preference number: 6 (lower is better)
Translates to: THSHLCSPLHRV*AGTQGRRCTCR
Trigger: CCTACATGTGCATCTGCGGCCCTGGGTACCAGCGCAGACCCGATGGAGAGGGCTGCATAGATGAGAATGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 72 bp AGATCCCGGGCTTGGTCTGACACTCATTCTCATCTATaGAGCCCTCTCCATCGGGTCTGCGCTGGTACCCAG +
Preference number: 6 (lower is better)
Translates to: RSRAWSDTHSHL*SPLHRVCAGTQ
Trigger: CTGGGTACCAGCGCAGACCCGATGGAGAGGGCTGCATAGATGAGAATGAGTGTCAGACCAAGCCCGGGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp GGTGGTTACCCTCACACTCGTCCACATCTTCACAGCTaGCACCACTCTGATCGAGTGAGAACCCCCGTTGGC +
Preference number: 6 (lower is better)
Translates to: GGYPHTRPHLHS*HHSDRVRTPVG
Trigger: GCCAACGGGGGTTCTCACTCGATCAGAGTGGTGCCAGCTGTGAAGATGTGGACGAGTGTGAGGGTAACCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 72 bp GAGCAGCACTCGGACTTCAAGGTGGCTCCGTTGATGTaGATCTCACAGCGCCCGTCGATGACAGTCTGCCAG +
Preference number: 6 (lower is better)
Translates to: EQHSDFKVAPLM*ISQRPSMTVCQ
Trigger: CTGGCAGACTGTCATCGACGGGCGCTGTGAGATCAACATCAACGGAGCCACCTTGAAGTCCGAGTGCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 72 bp AGGGAGGAGCAGCACTCGGACTTCAAGGTGGCTCCGTaGATGTTGATCTCACAGCGCCCGTCGATGACAGTC +
Preference number: 6 (lower is better)
Translates to: REEQHSDFKVAP*MLISQRPSMTV
Trigger: GACTGTCATCGACGGGCGCTGTGAGATCAACATCAACGGAGCCACCTTGAAGTCCGAGTGCTGCTCCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 90 bp CGGTGGCGGCCAGCGATGGGCAAGGTGCACTCTTCATCGTCATACTaGAGGAAGCAGGTCTCCAGGCGGATGTCAAGACAGATTCTTCCT +
Preference number: 6 (lower is better)
Translates to: RWRPAMGKVHSSSSY*RKQVSRRMSRQILP
Trigger: AGGAAGAATCTGTCTTGACATCCGCCTGGAGACCTGCTTCCTCAAGTATGACGATGAAGAGTGCACCTTGCCCATCGCTGGCCGCCACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 72 bp CAGCTCTGCAGTGACAGGTGTAGGAGCCCTGGTTGTTaGTGCACTCGCCACCAGTGCATGGGTTCTTCTCAC +
Preference number: 6 (lower is better)
Translates to: QLCSDRCRSPGC*CTRHQCMGSSH
Trigger: GTGAGAAGAACCCATGCACTGGTGGCGAGTGCATCAACAACCAGGGCTCCTACACCTGTCACTGCAGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 72 bp CAGGTGCACATTTCCCAGGATCCAGAACACACTCGTTaGTATCCACACAGGTCCTGCCGTCCGGAGCCACCT +
Preference number: 6 (lower is better)
Translates to: QVHISQDPEHTR*YPHRSCRPEPP
Trigger: AGGTGGCTCCGGACGGCAGGACCTGTGTGGATATCAACGAGTGTGTTCTGGATCCTGGGAAATGTGCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 72 bp TATGGACTGTGGCAGCTGGTTAGAGCAGCGCCCGTTTaGCAGAGCTGTGTAGCAGTAACCAGGGCGAACATC +
Preference number: 6 (lower is better)
Translates to: YGLWQLVRAAPV*QSCVAVTRANI
Trigger: GATGTTCGCCCTGGTTACTGCTACACAGCTCTGGCAAACGGGCGCTGCTCTAACCAGCTGCCACAGTCCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp AGAACCCTTTACCACAAATGGGATCAAGTTGACAGATaGTGCACGGGCTCCCCCACGCAGCACCAAGGGAGG +
Preference number: 6 (lower is better)
Translates to: RTLYHKWDQVDR*CTGSPTQHQGR
Trigger: CCTCCCTTGGTGCTGCGTGGGGGAGCCCGTGCACCATCTGTCAACTTGATCCCATTTGTGGTAAAGGGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 72 bp CCCACGGGACACTCACACCGGAAGCTGCCAACCATGTaGATGCACACTCCATTTTCACAGACCCCAGGGATC +
Preference number: 6 (lower is better)
Translates to: PTGHSHRKLPTM*MHTPFSQTPGI
Trigger: GATCCCTGGGGTCTGTGAAAATGGAGTGTGCATCAACATGGTTGGCAGCTTCCGGTGTGAGTGTCCCGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 72 bp AGGCAACGCCCATTCTCACAGATCCCGGGCTTGGTCTaGCACTCATTCTCATCTATGCAGCCCTCTCCATCG +
Preference number: 6 (lower is better)
Translates to: RQRPFSQIPGLV*HSFSSMQPSPS
Trigger: CGATGGAGAGGGCTGCATAGATGAGAATGAGTGTCAGACCAAGCCCGGGATCTGTGAGAATGGGCGTTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 72 bp GCAGCACTCGGACTTGGTGACGGGGTTCCTGTTGCTTaGGCCAATCTGGCACATGTTTTGCAAGACCTCCGA +
Preference number: 6 (lower is better)
Translates to: AALGLGDGVPVA*ANLAHVLQDLR
Trigger: TCGGAGGTCTTGCAAAACATGTGCCAGATTGGCTCAAGCAACAGGAACCCCGTCACCAAGTCCGAGTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 72 bp TGTTGCACTCGCAGCGGTAGCTACCGGGAGTTGGAATaGAGCGCCCATTTTGACAGAGATAGCGGACCAGTT +
Preference number: 6 (lower is better)
Translates to: CCTRSGSYRELE*SAHFDRDSGPV
Trigger: AACTGGTCCGCTATCTCTGTCAAAATGGGCGCTGCATTCCAACTCCCGGTAGCTACCGCTGCGAGTGCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 72 bp CCATTGGGACACTCGCACTTGAATGAACCCCTGGAGTaGACACACAGGCCGTTCTTGCATACTCCCGGGAAC +
Preference number: 6 (lower is better)
Translates to: PLGHSHLNEPLE*THRPFLHTPGN
Trigger: GTTCCCGGGAGTATGCAAGAACGGCCTGTGTGTCAACTCCAGGGGTTCATTCAAGTGCGAGTGTCCCAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 72 bp CCAGCGATGGGCAAGGTGCACTCTTCATCGTCATACTaGAGGAAGCAGGTCTCCAGGCGGATGTCAAGACAG +
Preference number: 6 (lower is better)
Translates to: PAMGKVHSSSSY*RKQVSRRMSRQ
Trigger: CTGTCTTGACATCCGCCTGGAGACCTGCTTCCTCAAGTATGACGATGAAGAGTGCACCTTGCCCATCGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 90 bp AGCCACAGGAAGGAGATATCTGACCAGACGGGCAAGTGCACATATTaGGCCTCGAGCAGAATCCATCCCCACAGGAATGCCGGCAAATGG +
Preference number: 6 (lower is better)
Translates to: SHRKEISDQTGKCTY*ASSRIHPHRNAGKW
Trigger: CCATTTGCCGGCATTCCTGTGGGGATGGATTCTGCTCGAGGCCAAATATGTGCACTTGCCCGTCTGGTCAGATATCTCCTTCCTGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 72 bp CAGCGATGGGCAAGGTGCACTCTTCATCGTCATACTTaGGGAAGCAGGTCTCCAGGCGGATGTCAAGACAGA +
Preference number: 6 (lower is better)
Translates to: QRWARCTLHRHT*GSRSPGGCQDR
Trigger: TCTGTCTTGACATCCGCCTGGAGACCTGCTTCCTCAAGTATGACGATGAAGAGTGCACCTTGCCCATCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 72 bp CGTCCATATCAACTGCTGAGTCATCAGGGCCCACAATaGTCCCACTTCCAAAGGGGCAGATCTGGCGGAAAG +
Preference number: 6 (lower is better)
Translates to: RPYQLLSHQGPQ*SHFQRGRSGGK
Trigger: CTTTCCGCCAGATCTGCCCCTTTGGAAGTGGGATCATTGTGGGCCCTGATGACTCAGCAGTTGATATGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 72 bp CCTTACAGAGACAGCGATATGACCCCATGGTGTTCTTaGAGTCCGCGTGTTGGCTGCACATGTGGGTTCCAT +
Preference number: 6 (lower is better)
Translates to: PYRDSDMTPWCS*SPRVGCTCGFH
Trigger: ATGGAACCCACATGTGCAGCCAACACGCGGACTGCAAGAACACCATGGGGTCATATCGCTGTCTCTGTAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp AGGAGATATCTGACCAGACGGGCAAGTGCACATATTTaGCCTCGAGCAGAATCCATCCCCACAGGAATGCCG +
Preference number: 6 (lower is better)
Translates to: RRYLTRRASAHI*PRAESIPTGMP
Trigger: CGGCATTCCTGTGGGGATGGATTCTGCTCGAGGCCAAATATGTGCACTTGCCCGTCTGGTCAGATATCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp CACTGGTACTTCCCTATGAGGTTCACACAACGCCCATaGGGACAGAGATTCGCACTCAGCTCACACTCGTTG +
Preference number: 6 (lower is better)
Translates to: HWYFPMRFTQRP*GQRFALSSHSL
Trigger: CAACGAGTGTGAGCTGAGTGCGAATCTCTGTCCCCATGGGCGTTGTGTGAACCTCATAGGGAAGTACCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp CGTTTCGTTCGTGCTTCTCCGTTTCCGGCCTCGTTTTaGGTAGCCGTTGATCTTACACTCATAGCAGGCCTC +
Preference number: 6 (lower is better)
Translates to: RFVRASPFPASF*VAVDLTLIAGL
Trigger: GAGGCCTGCTATGAGTGTAAGATCAACGGCTACCCAAAACGAGGCCGGAAACGGAGAAGCACGAACGAAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 72 bp GCGGTAGCTACCGGGAGTTGGAATGCAGCGCCCATTTaGACAGAGATAGCGGACCAGTTGACAGTAGTCAGT +
Preference number: 6 (lower is better)
Translates to: AVATGSWNAAPI*TEIADQLTVVS
Trigger: ACTGACTACTGTCAACTGGTCCGCTATCTCTGTCAAAATGGGCGCTGCATTCCAACTCCCGGTAGCTACCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 72 bp CACCTACACTTGAAGCTGCCAATGGTGTTCCTGCACTaGCCGTGGGTACAGAGGCTGGGTATCATCTTGCAC +
Preference number: 6 (lower is better)
Translates to: HLHLKLPMVFLH*PWVQRLGIILH
Trigger: GTGCAAGATGATACCCAGCCTCTGTACCCACGGCAAGTGCAGGAACACCATTGGCAGCTTCAAGTGTAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 72 bp TCCTTACAGAGACAGCGATATGACCCCATGGTGTTCTaGCAGTCCGCGTGTTGGCTGCACATGTGGGTTCCA +
Preference number: 6 (lower is better)
Translates to: SLQRQRYDPMVF*QSACWLHMWVP
Trigger: TGGAACCCACATGTGCAGCCAACACGCGGACTGCAAGAACACCATGGGGTCATATCGCTGTCTCTGTAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 72 bp GTTCGGGATTTCTTGGCACTCGTTTCGATCGTTGCATaGACCTGTGGAGGTAAGGCGGTAGCCGGGCTTACA +
Preference number: 6 (lower is better)
Translates to: VRDFLALVSIVA*TCGGKAVAGLT
Trigger: TGTAAGCCCGGCTACCGCCTTACCTCCACAGGTCAATGCAACGATCGAAACGAGTGCCAAGAAATCCCGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 72 bp TGTTGGATGGATCTGGAGCCACAGGAAGGAGATATCTaGCCAGACGGGCAAGTGCACATATTTGGCCTCGAG +
Preference number: 6 (lower is better)
Translates to: CWMDLEPQEGDI*PDGQVHIFGLE
Trigger: CTCGAGGCCAAATATGTGCACTTGCCCGTCTGGTCAGATATCTCCTTCCTGTGGCTCCAGATCCATCCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 72 bp GAAGACACTCATCTATGTCTCTGCACTCAGTTCTGGTaGGTGTGCTCTGGTAGCCAGCTCTGCAGTGACAGG +
Preference number: 6 (lower is better)
Translates to: EDTHLCLCTQFW*VCSGSQLCSDR
Trigger: CCTGTCACTGCAGAGCTGGCTACCAGAGCACACTCACCAGAACTGAGTGCAGAGACATAGATGAGTGTCTTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 72 bp ATCCCCTGTATAGCCATCCTTACAGAGACAGCGATATaGCCCCATGGTGTTCTTGCAGTCCGCGTGTTGGCT +
Preference number: 6 (lower is better)
Translates to: IPCIAILTETAI*PHGVLAVRVLA
Trigger: AGCCAACACGCGGACTGCAAGAACACCATGGGGTCATATCGCTGTCTCTGTAAGGATGGCTATACAGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 72 bp TATCAGTGCCTGCTGATGTCATTCCCGGTCCACTGCTaGAGAGTGCCTGATATTCCGCTGAATTCTGTGCAG +
Preference number: 6 (lower is better)
Translates to: YQCLLMSFPVHC*RVPDIPLNSVQ
Trigger: CTGCACAGAATTCAGCGGAATATCAGGCACTCTGCAGCAGTGGACCGGGAATGACATCAGCAGGCACTGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 72 bp GGGTTCCTGTTGCTTGAGCCAATCTGGCACATGTTTTaGAAGACCTCCGAAAAGCAGTACCCTTCCCGGTTG +
Preference number: 6 (lower is better)
Translates to: GFLLLEPIWHMF*KTSEKQYPSRL
Trigger: CAACCGGGAAGGGTACTGCTTTTCGGAGGTCTTGCAAAACATGTGCCAGATTGGCTCAAGCAACAGGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp CACTTGAAGCTGCCAATGGTGTTCCTGCACTTGCCGTaGGTACAGAGGCTGGGTATCATCTTGCACTCATTG +
Preference number: 6 (lower is better)
Translates to: HLKLPMVFLHLP*VQRLGIILHSL
Trigger: CAATGAGTGCAAGATGATACCCAGCCTCTGTACCCACGGCAAGTGCAGGAACACCATTGGCAGCTTCAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp AACACAATGCCCTTGGCCTATCCGGAAGTATCCTGGTaGACAGCCACACAGGTAGCCACCCTCAGTATTAGA +
Preference number: 6 (lower is better)
Translates to: NTMPLAYPEVSW*TATQVATLSIR
Trigger: TCTAATACTGAGGGTGGCTACCTGTGTGGCTGTCCACCAGGATACTTCCGGATAGGCCAAGGGCATTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp AGAAACACAATGCCCTTGGCCTATCCGGAAGTATCCTaGTGGACAGCCACACAGGTAGCCACCCTCAGTATT +
Preference number: 6 (lower is better)
Translates to: RNTMPLAYPEVS*WTATQVATLSI
Trigger: AATACTGAGGGTGGCTACCTGTGTGGCTGTCCACCAGGATACTTCCGGATAGGCCAAGGGCATTGTGTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 72 bp AAGGAGATATCTGACCAGACGGGCAAGTGCACATATTaGGCCTCGAGCAGAATCCATCCCCACAGGAATGCC +
Preference number: 6 (lower is better)
Translates to: KEISDQTGKCTY*ASSRIHPHRNA
Trigger: GGCATTCCTGTGGGGATGGATTCTGCTCGAGGCCAAATATGTGCACTTGCCCGTCTGGTCAGATATCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 72 bp GGTCTCCCGGGAATTACCAGAGGGACAGAGCACAGCTaGTTGAAATCCTCAGTTGACCTGATGGGACACATC +
Preference number: 6 (lower is better)
Translates to: GLPGITRGTEHS*LKSSVDLMGHI
Trigger: GATGTGTCCCATCAGGTCAACTGAGGATTTCAACAAGCTGTGCTCTGTCCCTCTGGTAATTCCCGGGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 72 bp CAGCAGGAAGCCTTAGAGACACCAACTCCAATTTCATaGCTGCAGGCTGTATCTCCATTGTCTCCCCGGGGT +
Preference number: 6 (lower is better)
Translates to: QQEALETPTPIS*LQAVSPLSPRG
Trigger: ACCCCGGGGAGACAATGGAGATACAGCCTGCAGCAATGAAATTGGAGTTGGTGTCTCTAAGGCTTCCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 72 bp CAGGTGAAGCTTCCTGGAGTGTTCTGGCAAACACCCTaGGACCCACACAGGTTGATATCAGACGTGCACTCA +
Preference number: 6 (lower is better)
Translates to: QVKLPGVFWQTP*DPHRLISDVHS
Trigger: TGAGTGCACGTCTGATATCAACCTGTGTGGGTCCAAGGGTGTTTGCCAGAACACTCCAGGAAGCTTCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 90 bp GGATATTCTGGTCTCCCGGGAATTACCAGAGGGACAGAGCACAGCTaGTTGAAATCCTCAGTTGACCTGATGGGACACATCTCGGGAGCA +
Preference number: 6 (lower is better)
Translates to: GYSGLPGITRGTEHS*LKSSVDLMGHISGA
Trigger: TGCTCCCGAGATGTGTCCCATCAGGTCAACTGAGGATTTCAACAAGCTGTGCTCTGTCCCTCTGGTAATTCCCGGGAGACCAGAATATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 90 bp GGGAGTTGGAATGCAGCGCCCATTTTGACAGAGATAGCGGACCAGTaGACAGTAGTCAGTAACGTTGAAAGGCAGCACCCTTGGTGGTTC +
Preference number: 6 (lower is better)
Translates to: GSWNAAPILTEIADQ*TVVSNVERQHPWWF
Trigger: GAACCACCAAGGGTGCTGCCTTTCAACGTTACTGACTACTGTCAACTGGTCCGCTATCTCTGTCAAAATGGGCGCTGCATTCCAACTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 90 bp TATTCTGGTCTCCCGGGAATTACCAGAGGGACAGAGCACAGCTTGTaGAAATCCTCAGTTGACCTGATGGGACACATCTCGGGAGCAACA +
Preference number: 6 (lower is better)
Translates to: YSGLPGITRGTEHSL*KSSVDLMGHISGAT
Trigger: TGTTGCTCCCGAGATGTGTCCCATCAGGTCAACTGAGGATTTCAACAAGCTGTGCTCTGTCCCTCTGGTAATTCCCGGGAGACCAGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 90 bp AAAGTCATTCCATTGGGACACTCGCACTTGAATGAACCCCTGGAGTaGACACACAGGCCGTTCTTGCATACTCCCGGGAACACTTCACAC +
Preference number: 6 (lower is better)
Translates to: KVIPLGHSHLNEPLE*THRPFLHTPGNTSH
Trigger: GTGTGAAGTGTTCCCGGGAGTATGCAAGAACGGCCTGTGTGTCAACTCCAGGGGTTCATTCAAGTGCGAGTGTCCCAATGGAATGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 90 bp CCACTGTCACACCTACACTTGAAGCTGCCAATGGTGTTCCTGCACTaGCCGTGGGTACAGAGGCTGGGTATCATCTTGCACTCATTGATA +
Preference number: 6 (lower is better)
Translates to: PLSHLHLKLPMVFLH*PWVQRLGIILHSLI
Trigger: TATCAATGAGTGCAAGATGATACCCAGCCTCTGTACCCACGGCAAGTGCAGGAACACCATTGGCAGCTTCAAGTGTAGGTGTGACAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 72 bp ACTCATCCATATCTTCACAGTTCTTTCCGTCCCGCGTaGCATGAAAGCCCGCATTGCATACGCAGTGGAAGC +
Preference number: 6 (lower is better)
Translates to: THPYLHSSFRPA*HESPHCIRSGS
Trigger: GCTTCCACTGCGTATGCAATGCGGGCTTTCATGTCACGCGGGACGGAAAGAACTGTGAAGATATGGATGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 72 bp TGTAGCAGTAACCAGGGCGAACATCTACGCATCTGGTaGCATCAGGAGAGGTGTAAAAACCAGGGGGACATT +
Preference number: 6 (lower is better)
Translates to: CSSNQGEHLRIW*HQERCKNQGDI
Trigger: AATGTCCCCCTGGTTTTTACACCTCTCCTGATGGCACCAGATGCGTAGATGTTCGCCCTGGTTACTGCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 72 bp TTGATGTTGATCTCACAGCGCCCGTCGATGACAGTCTaGCAGCAAGTGCCCTTGATGGTTTCTATGCAGATG +
Preference number: 6 (lower is better)
Translates to: LMLISQRPSMTV*QQVPLMVSMQM
Trigger: CATCTGCATAGAAACCATCAAGGGCACTTGCTGGCAGACTGTCATCGACGGGCGCTGTGAGATCAACATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 72 bp ATTCGCAGCGATAGCTTCCCTCTGTGTTGTGGCAAATaGCTCCTCGACACAGGAGAGGATCTCTCTGACATT +
Preference number: 6 (lower is better)
Translates to: IRSDSFPLCCGK*LLDTGEDLSDI
Trigger: AATGTCAGAGAGATCCTCTCCTGTGTCGAGGAGGCATTTGCCACAACACAGAGGGAAGCTATCGCTGCGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 72 bp AGAAGCTTCCCACGGTGTCGATGCACTGGCCATGACTaGATATGTTCGGGATTTCTTGGCACTCGTTTCGAT +
Preference number: 6 (lower is better)
Translates to: RSFPRCRCTGHD*ICSGFLGTRFD
Trigger: ATCGAAACGAGTGCCAAGAAATCCCGAACATATGCAGTCATGGCCAGTGCATCGACACCGTGGGAAGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp CTCACACTCGTTGATGTCAATGCATGCAGAGATGTTTaGGGACAATTGGTGACCAGGAGGACATTCGCAGCG +
Preference number: 6 (lower is better)
Translates to: LTLVDVNACRDV*GQLVTRRTFAA
Trigger: CGCTGCGAATGTCCTCCTGGTCACCAATTGTCCCCAAACATCTCTGCATGCATTGACATCAACGAGTGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp ATTCATCAATATCGACACAGAAGAGCCTGTCATGAGTaGGGTGGTAGCCAGGGTTGCAGGCACACTGGTACT +
Preference number: 6 (lower is better)
Translates to: IHQYRHRRACHE*GGSQGCRHTGT
Trigger: AGTACCAGTGTGCCTGCAACCCTGGCTACCACCCCACTCATGACAGGCTCTTCTGTGTCGATATTGATGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp TATAGCCATCCTTACAGAGACAGCGATATGACCCCATaGTGTTCTTGCAGTCCGCGTGTTGGCTGCACATGT +
Preference number: 6 (lower is better)
Translates to: YSHPYRDSDMTP*CSCSPRVGCTC
Trigger: ACATGTGCAGCCAACACGCGGACTGCAAGAACACCATGGGGTCATATCGCTGTCTCTGTAAGGATGGCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp GTTTCCAGAGCGAGTATCGACACAGCCGACACGAGTTaGATTCAGCTCAAAATCCGGAGGACAATCGCATGT +
Preference number: 6 (lower is better)
Translates to: VSRASIDTADTS*IQLKIRRTIAC
Trigger: ACATGCGATTGTCCTCCGGATTTTGAGCTGAATCCAACTCGTGTCGGCTGTGTCGATACTCGCTCTGGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp AGTAGCTCATTCGCAAATCTTGGCACCTTCTTCCAGTaGAGGACAGGGAGAACCCCTCTGGACACAGACATT +
Preference number: 6 (lower is better)
Translates to: SSSFANLGTFFQ*RTGRTPLDTDI
Trigger: AATGTCTGTGTCCAGAGGGGTTCTCCCTGTCCTCCACTGGAAGAAGGTGCCAAGATTTGCGAATGAGCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 72 bp AAGGCATACTCAGTGCTGGCACAACAGCATTCCGATTaGGTAACAGCACCAAACAACGGCTTCACGCACTGG +
Preference number: 6 (lower is better)
Translates to: KAYSVLAQQHSD*VTAPNNGFTHW
Trigger: CCAGTGCGTGAAGCCGTTGTTTGGTGCTGTTACCAAATCGGAATGCTGTTGTGCCAGCACTGAGTATGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 72 bp GTAGCATCCAAAGTCATTCCATTGGGACACTCGCACTaGAATGAACCCCTGGAGTTGACACACAGGCCGTTC +
Preference number: 6 (lower is better)
Translates to: VASKVIPLGHSH*NEPLELTHRPF
Trigger: GAACGGCCTGTGTGTCAACTCCAGGGGTTCATTCAAGTGCGAGTGTCCCAATGGAATGACTTTGGATGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 90 bp CTCACACTCGTTGATGTCAATGCATGCAGAGATGTTTGGGGACAATaGGTGACCAGGAGGACATTCGCAGCGATAGCTTCCCTCTGTGTT +
Preference number: 6 (lower is better)
Translates to: LTLVDVNACRDVWGQ*VTRRTFAAIASLCV
Trigger: AACACAGAGGGAAGCTATCGCTGCGAATGTCCTCCTGGTCACCAATTGTCCCCAAACATCTCTGCATGCATTGACATCAACGAGTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 72 bp ATCCAAAGTCATTCCATTGGGACACTCGCACTTGAATaGACCCCTGGAGTTGACACACAGGCCGTTCTTGCA +
Preference number: 6 (lower is better)
Translates to: IQSHSIGTLALE*TPGVDTQAVLA
Trigger: TGCAAGAACGGCCTGTGTGTCAACTCCAGGGGTTCATTCAAGTGCGAGTGTCCCAATGGAATGACTTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 72 bp TTATATCAGTGCCTGCTGATGTCATTCCCGGTCCACTaGTGCAGAGTGCCTGATATTCCGCTGAATTCTGTG +
Preference number: 6 (lower is better)
Translates to: LYQCLLMSFPVH*CRVPDIPLNSV
Trigger: CACAGAATTCAGCGGAATATCAGGCACTCTGCAGCAGTGGACCGGGAATGACATCAGCAGGCACTGATATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 72 bp ATTCGCACTCAGCTCACACTCGTTGATGTCAATGCATaGAGAGATGTTTGGGGACAATTGGTGACCAGGAGG +
Preference number: 6 (lower is better)
Translates to: IRTQLTLVDVNA*RDVWGQLVTRR
Trigger: CCTCCTGGTCACCAATTGTCCCCAAACATCTCTGCATGCATTGACATCAACGAGTGTGAGCTGAGTGCGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 72 bp TGTGACAAAGGCAGTAGAAGCTTCCCACGGTGTCGATaGACTGGCCATGACTGCATATGTTCGGGATTTCTT +
Preference number: 6 (lower is better)
Translates to: CDKGSRSFPRCR*TGHDCICSGFL
Trigger: AAGAAATCCCGAACATATGCAGTCATGGCCAGTGCATCGACACCGTGGGAAGCTTCTACTGCCTTTGTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 72 bp ACTTGTCATTCTGTAGACTATACCCAGGCGGGCAAATaGATCTGTAGGAGCCATCCAGGTTCTGACAGGTTC +
Preference number: 6 (lower is better)
Translates to: TCHSVDYTQAGK*ICRSHPGSDRF
Trigger: GAACCTGTCAGAACCTGGATGGCTCCTACAGATGCATTTGCCCGCCTGGGTATAGTCTACAGAATGACAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp ACAGTAGTCAGTAACGTTGAAAGGCAGCACCCTTGGTaGTTCCCGAGACGGAGATGGATATGGATATTCTGG +
Preference number: 6 (lower is better)
Translates to: TVVSNVERQHPW*FPRRRWIWIFW
Trigger: CCAGAATATCCATATCCATCTCCGTCTCGGGAACCACCAAGGGTGCTGCCTTTCAACGTTACTGACTACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 72 bp AATGCAGCGCCCATTTTGACAGAGATAGCGGACCAGTaGACAGTAGTCAGTAACGTTGAAAGGCAGCACCCT +
Preference number: 6 (lower is better)
Translates to: NAAPILTEIADQ*TVVSNVERQHP
Trigger: AGGGTGCTGCCTTTCAACGTTACTGACTACTGTCAACTGGTCCGCTATCTCTGTCAAAATGGGCGCTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 72 bp GTTGATGTCAATGCATGCAGAGATGTTTGGGGACAATaGGTGACCAGGAGGACATTCGCAGCGATAGCTTCC +
Preference number: 6 (lower is better)
Translates to: VDVNACRDVWGQ*VTRRTFAAIAS
Trigger: GGAAGCTATCGCTGCGAATGTCCTCCTGGTCACCAATTGTCCCCAAACATCTCTGCATGCATTGACATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 72 bp CCATGGGGACAGAGATTCGCACTCAGCTCACACTCGTaGATGTCAATGCATGCAGAGATGTTTGGGGACAAT +
Preference number: 6 (lower is better)
Translates to: PWGQRFALSSHS*MSMHAEMFGDN
Trigger: ATTGTCCCCAAACATCTCTGCATGCATTGACATCAACGAGTGTGAGCTGAGTGCGAATCTCTGTCCCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 90 bp CGGATGTCAAGACAGATTCTTCCTGTAGCATCCAAAGTCATTCCATaGGGACACTCGCACTTGAATGAACCCCTGGAGTTGACACACAGG +
Preference number: 6 (lower is better)
Translates to: RMSRQILPVASKVIP*GHSHLNEPLELTHR
Trigger: CCTGTGTGTCAACTCCAGGGGTTCATTCAAGTGCGAGTGTCCCAATGGAATGACTTTGGATGCTACAGGAAGAATCTGTCTTGACATCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 90 bp TTCATCAGAGTTGTGAGGGCCGGCAGGAGCTCTAGGATTCGGACCTaGTTATTGACATGGGAAATATTGAAAGCAAAGCTAGCCGGCTTC +
Preference number: 6 (lower is better)
Translates to: FIRVVRAGRSSRIRT*LLTWEILKAKLAGF
Trigger: GAAGCCGGCTAGCTTTGCTTTCAATATTTCCCATGTCAATAACAAGGTCCGAATCCTAGAGCTCCTGCCGGCCCTCACAACTCTGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 72 bp CATGGGGACAGAGATTCGCACTCAGCTCACACTCGTTaGTGTCAATGCATGCAGAGATGTTTGGGGACAATT +
Preference number: 6 (lower is better)
Translates to: HGDRDSHSAHTR*CQCMQRCLGTI
Trigger: AATTGTCCCCAAACATCTCTGCATGCATTGACATCAACGAGTGTGAGCTGAGTGCGAATCTCTGTCCCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 72 bp ATGCATTCCGCATTTCGCTGGCACACAGGGCCATTCTaGCACTCGTCGATATCTTCACAAACCAGTAACTTG +
Preference number: 6 (lower is better)
Translates to: MHSAFRWHTGPF*HSSISSQTSNL
Trigger: CAAGTTACTGGTTTGTGAAGATATCGACGAGTGTCAGAATGGCCCTGTGTGCCAGCGAAATGCGGAATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 72 bp GAGTGTTCTGGCAAACACCCTTGGACCCACACAGGTTaGTATCAGACGTGCACTCATTGTTATCAATGCAGG +
Preference number: 6 (lower is better)
Translates to: ECSGKHPWTHTG*YQTCTHCYQCR
Trigger: CCTGCATTGATAACAATGAGTGCACGTCTGATATCAACCTGTGTGGGTCCAAGGGTGTTTGCCAGAACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 72 bp TCCTGTCTTCTCGGAGAACGTATCCAACAGGGCATTTaGATTCATAGGACCCGTAGGTATTTACACAGCGGA +
Preference number: 6 (lower is better)
Translates to: SCLLGERIQQGI*IHRTRRYLHSG
Trigger: TCCGCTGTGTAAATACCTACGGGTCCTATGAATGCAAATGCCCTGTTGGATACGTTCTCCGAGAAGACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp TTGACAGTAGTCAGTAACGTTGAAAGGCAGCACCCTTaGTGGTTCCCGAGACGGAGATGGATATGGATATTC +
Preference number: 6 (lower is better)
Translates to: LTVVSNVERQHP*WFPRRRWIWIF
Trigger: GAATATCCATATCCATCTCCGTCTCGGGAACCACCAAGGGTGCTGCCTTTCAACGTTACTGACTACTGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp GGCAGGAGCTCTAGGATTCGGACCTTGTTATTGACATaGGAAATATTGAAAGCAAAGCTAGCCGGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: GRSSRIRTLLLT*EILKAKLAGFS
Trigger: GGAGAAGCCGGCTAGCTTTGCTTTCAATATTTCCCATGTCAATAACAAGGTCCGAATCCTAGAGCTCCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 72 bp GGAGTGTTCTGGCAAACACCCTTGGACCCACACAGGTaGATATCAGACGTGCACTCATTGTTATCAATGCAG +
Preference number: 6 (lower is better)
Translates to: GVFWQTPLDPHR*ISDVHSLLSMQ
Trigger: CTGCATTGATAACAATGAGTGCACGTCTGATATCAACCTGTGTGGGTCCAAGGGTGTTTGCCAGAACACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 90 bp ATTCTTCCTGTAGCATCCAAAGTCATTCCATTGGGACACTCGCACTaGAATGAACCCCTGGAGTTGACACACAGGCCGTTCTTGCATACT +
Preference number: 6 (lower is better)
Translates to: ILPVASKVIPLGHSH*NEPLELTHRPFLHT
Trigger: AGTATGCAAGAACGGCCTGTGTGTCAACTCCAGGGGTTCATTCAAGTGCGAGTGTCCCAATGGAATGACTTTGGATGCTACAGGAAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 72 bp GGTTTTCCATCCAGGACAACAGTATGCATTATAACGTaGTCCACAGACATTGGGTCCTTTCAGCGCATCGTG +
Preference number: 6 (lower is better)
Translates to: GFPSRTTVCIIT*STDIGSFQRIV
Trigger: CACGATGCGCTGAAAGGACCCAATGTCTGTGGATCACGTTATAATGCATACTGTTGTCCTGGATGGAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 72 bp TACATTCCCCGCCATCGCAGACTCCAGGAATGGTGCTaGACTCGTCAATATCTTCACATTTTTGTGACACTT +
Preference number: 6 (lower is better)
Translates to: YIPRHRRLQEWC*TRQYLHIFVTL
Trigger: AAGTGTCACAAAAATGTGAAGATATTGACGAGTGCAGCACCATTCCTGGAGTCTGCGATGGCGGGGAATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS GCA 72 bp TTGTACATTCCCCGCCATCGCAGACTCCAGGAATGGTaGTGCACTCGTCAATATCTTCACATTTTTGTGACA +
Preference number: 6 (lower is better)
Translates to: LYIPRHRRLQEW*CTRQYLHIFVT
Trigger: TGTCACAAAAATGTGAAGATATTGACGAGTGCAGCACCATTCCTGGAGTCTGCGATGGCGGGGAATGTACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp TGTTTGTACATTCCCCGCCATCGCAGACTCCAGGAATaGTGCTGCACTCGTCAATATCTTCACATTTTTGTG +
Preference number: 6 (lower is better)
Translates to: CLYIPRHRRLQE*CCTRQYLHIFV
Trigger: CACAAAAATGTGAAGATATTGACGAGTGCAGCACCATTCCTGGAGTCTGCGATGGCGGGGAATGTACAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp CTCAGTGTTGCTGCAGGTCCCCAAGGCACAGATTTCTaGCTCTTCAACACACTCATCAATATCTTCACACTT +
Preference number: 6 (lower is better)
Translates to: LSVAAGPQGTDF*LFNTLINIFTL
Trigger: AAGTGTGAAGATATTGATGAGTGTGTTGAAGAGCCAGAAATCTGTGCCTTGGGGACCTGCAGCAACACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp TCAAAGCACAGCAGCACTCCTGCTTGGAATGGTTTCTaGATTTGGGTGATGAACACTTCCCACCTTCAAACT +
Preference number: 6 (lower is better)
Translates to: SKHSSTPAWNGF*IWVMNTSHLQT
Trigger: AGTTTGAAGGTGGGAAGTGTTCATCACCCAAATCCAGAAACCATTCCAAGCAGGAGTGCTGCTGTGCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 72 bp GTTGTGAGGGCCGGCAGGAGCTCTAGGATTCGGACCTaGTTATTGACATGGGAAATATTGAAAGCAAAGCTA +
Preference number: 6 (lower is better)
Translates to: VVRAGRSSRIRT*LLTWEILKAKL
Trigger: TAGCTTTGCTTTCAATATTTCCCATGTCAATAACAAGGTCCGAATCCTAGAGCTCCTGCCGGCCCTCACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 72 bp TGGCAAATGCCTCCTCGACACAGGAGAGGATCTCTCTaGCATTCATCAATATCCATGCAGTTCTTCATCATC +
Preference number: 6 (lower is better)
Translates to: WQMPPRHRRGSL*HSSISMQFFII
Trigger: GATGATGAAGAACTGCATGGATATTGATGAATGTCAGAGAGATCCTCTCCTGTGTCGAGGAGGCATTTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 72 bp CTGTCGTTGACACACTCCCCATTTCGGCAAACATCATaGATAACCTTGCACTCATCAATATCTGCTCCGTTG +
Preference number: 6 (lower is better)
Translates to: LSLTHSPFRQTS*ITLHSSISAPL
Trigger: CAACGGAGCAGATATTGATGAGTGCAAGGTTATTCATGATGTTTGCCGAAATGGGGAGTGTGTCAACGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp CACAGGTTTTTAGGTCAGGTTTGTACACAAATCCTTTaGGGCAGGTGCAGACAAAACTTCCAGGTGTGTTTC +
Preference number: 6 (lower is better)
Translates to: HRFLGQVCTQIL*GRCRQNFQVCF
Trigger: GAAACACACCTGGAAGTTTTGTCTGCACCTGCCCCAAAGGATTTGTGTACAAACCTGACCTAAAAACCTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp GTGTTTTTGCATATAAAATTGCAGGGTTTGGGAGCCTaGTTGCATTCATTCAGATCTACACAGGCGGTCCCT +
Preference number: 6 (lower is better)
Translates to: VFLHIKLQGLGA*LHSFRSTQAVP
Trigger: AGGGACCGCCTGTGTAGATCTGAATGAATGCAACCAGGCTCCCAAACCCTGCAATTTTATATGCAAAAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 72 bp TTAATGCACTGCCCATGTCTACAGACATCAGGTTCTTaGCATTCGTCCATATCAACTGCTGAGTCATCAGGG +
Preference number: 6 (lower is better)
Translates to: LMHCPCLQTSGS*HSSISTAESSG
Trigger: CCCTGATGACTCAGCAGTTGATATGGACGAATGCAAAGAACCTGATGTCTGTAGACATGGGCAGTGCATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 72 bp TTATGTCTAAGCACATGGTCTGATCCACATTTGTTTTaGAGCCAGTGTGACAAAGGCAGTAGAAGCTTCCCA +
Preference number: 6 (lower is better)
Translates to: LCLSTWSDPHLF*SQCDKGSRSFP
Trigger: TGGGAAGCTTCTACTGCCTTTGTCACACTGGCTTCAAAACAAATGTGGATCAGACCATGTGCTTAGACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp CTCATCGATGTCTTCCAATATAACGGTGATGGGATTTaGACGAAAACCTTCTCCTCCAGGGCAAAGAATTTT +
Preference number: 6 (lower is better)
Translates to: LIDVFQYNGDGI*TKTFSSRAKNF
Trigger: AAAATTCTTTGCCCTGGAGGAGAAGGTTTTCGTCCAAATCCCATCACCGTTATATTGGAAGACATCGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS TCA 72 bp GAATTTTCATCTTCAGGTTATCGCCCAGTTCACCACTaGGGTAGTCTTTGTCATATCTGTCTTCTAACTGGT +
Preference number: 6 (lower is better)
Translates to: EFSSSGYRPVHH*GSLCHICLLTG
Trigger: ACCAGTTAGAAGACAGATATGACAAAGACTACCTCAGTGGTGAACTGGGCGATAACCTGAAGATGAAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CCA 72 bp AGTGCCCTTGATGGTTTCTATGCAGATGGTTTTTGTTaGGTCCAGAGTACTTTCAGGAGAACATTCACAAAT +
Preference number: 6 (lower is better)
Translates to: SALDGFYADGFC*VQSTFRRTFTN
Trigger: ATTTGTGAATGTTCTCCTGAAAGTACTCTGGACCCAACAAAAACCATCTGCATAGAAACCATCAAGGGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2
CDS CAA 72 bp CATTCATCAATGTCTTCACAGGTTTTTAGGTCAGGTTaGTACACAAATCCTTTGGGGCAGGTGCAGACAAAA +
Preference number: 6 (lower is better)
Translates to: HSSMSSQVFRSG*YTNPLGQVQTK
Trigger: TTTTGTCTGCACCTGCCCCAAAGGATTTGTGTACAAACCTGACCTAAAAACCTGTGAAGACATTGATGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028633.13
ENSMUST00000103234.2