RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBLN2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000064080

Ensembl transcript IDs: ENSMUST00000041544.8, ENSMUST00000113498.9, ENSMUST00000132021.2, ENSMUST00000134974.2

Found 329 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGTGTAGACCAGGCTGGCCTGGAACTCAGAGATCTACCTACCTCTaGCTCCCCAGTGCTAGGATTAAAGGTCTGTGCTACCATGCACAG +
Preference number: 1 (lower is better)
Translates to: QCRPGWPGTQRSTYL*LPSARIKGLCYHAQ
Trigger: CTGTGCATGGTAGCACAGACCTTTAATCCTAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGCCTGGTCTACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
3UTR TCA 90 bp GGAACACAGTGGATGAAGGAATGGAATGTCAGCTGTAGCCATAGTTaGGGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGC +
Preference number: 1 (lower is better)
Translates to: GTQWMKEWNVSCSHS*GVEFRSPLWLFPVC
Trigger: GCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCCTCAACTATGGCTACAGCTGACATTCCATTCCTTCATCCACTGTGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
3UTR-3UTR TCA 90 bp GACCAGGCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTACCATCTAGCCTCGGGTaGCCCTGGCCTGTACTCAGT +
Preference number: 2 (lower is better)
Translates to: DQAGLELRDLPTSASPVLPSSLG*PWPVLS
Trigger: ACTGAGTACAGGCCAGGGTCACCCGAGGCTAGATGG...TAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGCCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
3UTR-3UTR CCA 90 bp TTCCAGTTTGCAGGTCACCATCTAGCCTCGGGTGACCCTGGCCTGTACTCAGTGCGCCCAGGCATCACCTaGAGGGATTGCCTGACATGT +
Preference number: 2 (lower is better)
Translates to: FQFAGHHLASGDPGLYSVRPGIT*RDCLTC
Trigger: ACATGTCAGGCAATCCCTCCAGGTGATGCCTGGGCG...CACTGAGTACAGGCCAGGGTCACCCGAGGCTAGATGGTGACCTGCAAACTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
3UTR-3UTR CCA 90 bp GACCAGGCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAGCCATAGTTGAGGAGTaGAGTTCAGAAGCCCCCTAT +
Preference number: 2 (lower is better)
Translates to: DQAGLELRDLPTSASPVLAIVEE*SSEAPY
Trigger: ATAGGGGGCTTCTGAACTCCACTCCTCAACTATGGC...TAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGCCTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
3UTR-3UTR CCA 90 bp GTAGCCATAGTTGAGGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGTACTCAGTGCCTGCTaGGGTGCATCTCCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: VAIVEEWSSEAPYGCFQFVLSAC*GASPSL
Trigger: GAGGGAGGGAGATGCACCCCAGCAGGCACTGAGTAC...AAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCCTCAACTATGGCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
3UTR-3UTR CCA 90 bp GTAGCCATAGTTGAGGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTCGCCCAGGCATCACCTaGAGGGATTGCCTGACATGT +
Preference number: 2 (lower is better)
Translates to: VAIVEEWSSEAPYGCFQFRPGIT*RDCLTC
Trigger: ACATGTCAGGCAATCCCTCCAGGTGATGCCTGGGCG...AAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCCTCAACTATGGCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGGCATCACCTGGAGGCCTGCACAGGTGCTaGGGGACCCAGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: AKSHLGVAQLPTAQASPGGLHRC*GTQGSS
Trigger: GCTGCTGCCCTGGGTCCCCCAGCACCTGTGCAGGCC...TCCAGGTGATGCCTGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR TCA 90 bp GCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGGCATCACCTGGAAGCCTCTGTGCCCAGTaGCAGGGCCTCCCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: AKSHLGVAQLPTAQASPGSLCAQ*QGLPAC
Trigger: GCAAGCCGGGAGGCCCTGTCACTGGGCACAGAGGCT...TCCAGGTGATGCCTGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGGCATCACCTGGACCAGCGTCAGGACAGTaGCAAGCCCGGCAGGATGAG +
Preference number: 4 (lower is better)
Translates to: AKSHLGVAQLPTAQASPGPASGQ*QARQDE
Trigger: CTCATCCTGCCGGGCTTGCCACTGTCCTGACGCTGG...TCCAGGTGATGCCTGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGGCATCACCTGGAGGGCAGCAGCTGCTGTaGGTCTGGGAAGGGCAACTG +
Preference number: 4 (lower is better)
Translates to: AKSHLGVAQLPTAQASPGGQQLL*VWEGQL
Trigger: CAGTTGCCCTTCCCAGACCCACAGCAGCTGCTGCCC...TCCAGGTGATGCCTGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGGCATCACCTGGATCGATGGCCCACTGCTaGCCCGCTGCACAACAGGTC +
Preference number: 4 (lower is better)
Translates to: AKSHLGVAQLPTAQASPGSMAHC*PAAQQV
Trigger: GACCTGTTGTGCAGCGGGCCAGCAGTGGGCCATCGA...TCCAGGTGATGCCTGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGGCATCACCTGGAGACACTCAGCACCTGTaGAATCCTGCCACGGGACGG +
Preference number: 4 (lower is better)
Translates to: AKSHLGVAQLPTAQASPGDTQHL*NPATGR
Trigger: CCGTCCCGTGGCAGGATTGCACAGGTGCTGAGTGTC...TCCAGGTGATGCCTGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGGCATCACCTGGACCAACGCCTCCTCGATaGAGTTCTCCAGCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: AKSHLGVAQLPTAQASPGPTPPR*SSPAGD
Trigger: GTCCCCTGCTGGAGAACTGCATCGAGGAGGCGTTGG...TCCAGGTGATGCCTGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGGCATCACCTGGAGGGGCCCTCTGCACCTaGCTGGACCTCGTTCACAAT +
Preference number: 4 (lower is better)
Translates to: AKSHLGVAQLPTAQASPGGALCT*LDLVHN
Trigger: ATTGTGAACGAGGTCCAGGCAGGTGCAGAGGGCCCC...TCCAGGTGATGCCTGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp CCTGCTGGGGTGCATCTCCCTCCCTCTAGGGTAGAGACTCAAGACCAACCAGCTTTTGGCCTGCACAGGTaGTGGGGGACCCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PAGVHLPPSRVETQDQPAFGLHR*WGTQGS
Trigger: GCTGCCCTGGGTCCCCCAGCACCTGTGCAGGCCAAA...AGCTGGTTGGTCTTGAGTCTCTACCCTAGAGGGAGGGAGATGCACCCCAGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp CCTGCTGGGGTGCATCTCCCTCCCTCTAGGGTAGAGACTCAAGACCAACCAGCTCTCCTGGCTTTGGCCTaGACAGGTGCTGGGGGACCC +
Preference number: 4 (lower is better)
Translates to: PAGVHLPPSRVETQDQPALLALA*TGAGGP
Trigger: GGGTCCCCCAGCACCTGTGCAGGCCAAAGCCAGGAG...AGCTGGTTGGTCTTGAGTCTCTACCCTAGAGGGAGGGAGATGCACCCCAGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR TCA 90 bp GCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGGCATCACCTGGAGGACCTCAGGCACTATaGGGGGCTCTTCACCTTCAC +
Preference number: 4 (lower is better)
Translates to: AKSHLGVAQLPTAQASPGGPQAL*GALHLH
Trigger: GTGAAGGTGAAGAGCCCCTCATAGTGCCTGAGGTCC...TCCAGGTGATGCCTGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp TTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCACTCCTGGCTTTGGCCTaGACAGGTGCTGGGGGACCC +
Preference number: 4 (lower is better)
Translates to: LQSHSKKPLRSGAAAHRPLLALA*TGAGGP
Trigger: GGGTCCCCCAGCACCTGTGCAGGCCAAAGCCAGGAG...TGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGGCATCACCTGGAACTCATCATTGTCGATaGCCCACTGCTGGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: AKSHLGVAQLPTAQASPGTHHCR*PTAGPL
Trigger: CAGCGGGCCAGCAGTGGGCCATCGACAATGATGAGT...TCCAGGTGATGCCTGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GACCAGGCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTATTCTCACATGTGTGCTaGCACAGGCGGCCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: DQAGLELRDLPTSASPVLFSHVC*HRRPGE
Trigger: CTCGCCGGGCCGCCTGTGCCAGCACACATGTGAGAA...TAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGCCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR TCA 90 bp GGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTAGCCTCTGTGCCCAGTaGCAGGGCCTCCCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: GVEFRSPLWLFPVCRSPSSLCAQ*QGLPAC
Trigger: GCAAGCCGGGAGGCCCTGTCACTGGGCACAGAGGCT...AGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR TCA 90 bp GCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGGCATCACCTGGACCTCATTGCCCTTCGTaGTGGTCAGGGAGATGGTGT +
Preference number: 4 (lower is better)
Translates to: AKSHLGVAQLPTAQASPGPHCPS*WSGRWC
Trigger: ACACCATCTCCCTGACCATCACGAAGGGCAATGAGG...TCCAGGTGATGCCTGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp CCTGCTGGGGTGCATCTCCCTCCCTCTAGGGTAGAGACTCAAGACCAACCAGCTCCAACGCCTCCTCGATaGAGTTCTCCAGCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: PAGVHLPPSRVETQDQPAPTPPR*SSPAGD
Trigger: GTCCCCTGCTGGAGAACTGCATCGAGGAGGCGTTGG...AGCTGGTTGGTCTTGAGTCTCTACCCTAGAGGGAGGGAGATGCACCCCAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAGGATTACCCACCTGGCCACACTaGGGGCAGCTGTCGGCTACT +
Preference number: 4 (lower is better)
Translates to: AGLELRDLPTSASPVLGLPTWPH*GQLSAT
Trigger: AGTAGCCGACAGCTGCCCGCAGTGTGGCCAGGTGGG...TAATCCTAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp CCTGCTGGGGTGCATCTCCCTCCCTCTAGGGTAGAGACTCAAGACCAACCAGCTGGCCGTAGTAGCTTCTaGCTCTGCCACCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: PAGVHLPPSRVETQDQPAGRSSF*LCHLLV
Trigger: GACCAGGAGGTGGCAGAGGCAGAAGCTACTACGGCC...AGCTGGTTGGTCTTGAGTCTCTACCCTAGAGGGAGGGAGATGCACCCCAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GACCAGGCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAGCCCGGGTGCACGTGTaGAGGTCTGTCACACACTCA +
Preference number: 4 (lower is better)
Translates to: DQAGLELRDLPTSASPVLARVHV*RSVTHS
Trigger: TGAGTGTGTGACAGACCTGCACACGTGCACCCGGGC...TAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGCCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp TTCCAGTTTGCAGGTCACCATCTAGCCTCGGGTGACCCTGGCCTGTACTCAGTGAGTGCTCGGCCCGGGTaGACGTGTGCAGGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: FQFAGHHLASGDPGLYSVSARPG*TCAGLS
Trigger: TGACAGACCTGCACACGTGCACCCGGGCCGAGCACT...CACTGAGTACAGGCCAGGGTCACCCGAGGCTAGATGGTGACCTGCAAACTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp TTCCAGTTTGCAGGTCACCATCTAGCCTCGGGTGACCCTGGCCTGTACTCAGTGGCAAGAAGCCATCCATaGAGCGTTGCCGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: FQFAGHHLASGDPGLYSVARSHP*SVAGPG
Trigger: GCCAGGCCCGGCAACGCTGCATGGATGGCTTCTTGC...CACTGAGTACAGGCCAGGGTCACCCGAGGCTAGATGGTGACCTGCAAACTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAGGATTACTTGCCACCACCGGGTaGGCAGGAGCACTCGGTGCT +
Preference number: 4 (lower is better)
Translates to: AGLELRDLPTSASPVLGLLATTG*AGALGA
Trigger: AGCACCGAGTGCTCCTGCCCACCCGGTGGTGGCAAG...TAATCCTAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAGGATTATGGACACAGCCCACCTaGCCACACTGCGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: AGLELRDLPTSASPVLGLWTQPT*PHCGQL
Trigger: CAGCTGCCCGCAGTGTGGCCAGGTGGGCTGTGTCCA...TAATCCTAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp TTCCAGTTTGCAGGTCACCATCTAGCCTCGGGTGACCCTGGCCTGTACTCAGTGCCAGCGTCAGGACAGTaGCAAGCCCGGCAGGATGAG +
Preference number: 4 (lower is better)
Translates to: FQFAGHHLASGDPGLYSVPASGQ*QARQDE
Trigger: CTCATCCTGCCGGGCTTGCCACTGTCCTGACGCTGG...CACTGAGTACAGGCCAGGGTCACCCGAGGCTAGATGGTGACCTGCAAACTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp TTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCACAGCTGCTGTGGGTCTaGGAAGGGCAACTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LQSHSKKPLRSGAAAHRPQLLWV*EGQLAR
Trigger: CCTGGCCAGTTGCCCTTCCCAGACCCACAGCAGCTG...TGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GTTAAGTTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACGGCCTGCACAGGTGCTaGGGGACCCAGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VKLQSHSKKPLRSGAAAHGLHRC*GTQGSS
Trigger: GCTGCTGCCCTGGGTCCCCCAGCACCTGTGCAGGCC...GTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAACTTAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GACCAGGCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTATGGCTGGGGATCTTGTaGGCAGGCTGTCCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: DQAGLELRDLPTSASPVLWLGIL*AGCPAF
Trigger: GAAGGCTGGACAGCCTGCCCACAAGATCCCCAGCCA...TAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGCCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp TTCCAGTTTGCAGGTCACCATCTAGCCTCGGGTGACCCTGGCCTGTACTCAGTGTTGGACTCACAGGACTaGCCCTCAGCCCGCACTCGG +
Preference number: 4 (lower is better)
Translates to: FQFAGHHLASGDPGLYSVLDSQD*PSARTR
Trigger: CCGAGTGCGGGCTGAGGGCCAGTCCTGTGAGTCCAA...CACTGAGTACAGGCCAGGGTCACCCGAGGCTAGATGGTGACCTGCAAACTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGGCATCACCTGGAAGGGATAGCCCAGGTTaGGGTTGGACTCACAGGACT +
Preference number: 4 (lower is better)
Translates to: AKSHLGVAQLPTAQASPGRDSPG*GWTHRT
Trigger: AGTCCTGTGAGTCCAACCCCAACCTGGGCTATCCCT...TCCAGGTGATGCCTGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GACCAGGCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAGCACCGGCAGTGGGATaGTGTTGGGAGATACCTGGG +
Preference number: 4 (lower is better)
Translates to: DQAGLELRDLPTSASPVLAPAVG*CWEIPG
Trigger: CCCAGGTATCTCCCAACACCATCCCACTGCCGGTGC...TAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGCCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp TTCCAGTTTGCAGGTCACCATCTAGCCTCGGGTGACCCTGGCCTGTACTCAGTGTTCTCACATGTGTGCTaGCACAGGCGGCCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: FQFAGHHLASGDPGLYSVFSHVC*HRRPGE
Trigger: CTCGCCGGGCCGCCTGTGCCAGCACACATGTGAGAA...CACTGAGTACAGGCCAGGGTCACCCGAGGCTAGATGGTGACCTGCAAACTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR TCA 90 bp GGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTGAGAGCAGCCAGGCCTaGCCTTGGCAGAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GVEFRSPLWLFPVCRSPSESSQA*PWQRCS
Trigger: GCTGCACCTCTGCCAAGGTCAGGCCTGGCTGCTCTC...AGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR TCA 90 bp TGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTAGCCGAGAGCAGCCAGGCCTaGCCTTGGCAGAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: WSSEAPYGCFQFAGHHLAESSQA*PWQRCS
Trigger: GCTGCACCTCTGCCAAGGTCAGGCCTGGCTGCTCTC...GGCTAGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR TCA 90 bp CCTGCTGGGGTGCATCTCCCTCCCTCTAGGGTAGAGACTCAAGACCAACCAGCTAGCCTGGCTCACAGGTaGGCGCCTTGTAGCATTGGA +
Preference number: 4 (lower is better)
Translates to: PAGVHLPPSRVETQDQPASLAHR*APCSIG
Trigger: TCCAATGCTACAAGGCGCTCACCTGTGAGCCAGGCT...AGCTGGTTGGTCTTGAGTCTCTACCCTAGAGGGAGGGAGATGCACCCCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR TCA 90 bp GCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGGCATCACCTGGATGCATTCACCATCTGTaGGGACATAGCCTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: AKSHLGVAQLPTAQASPGCIHHL*GHSLAH
Trigger: GTGAGCCAGGCTATGTCCTCACAGATGGTGAATGCA...TCCAGGTGATGCCTGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR TCA 90 bp CCTGCTGGGGTGCATCTCCCTCCCTCTAGGGTAGAGACTCAAGACCAACCAGCTAGCTCCCAGGCACGTTaGCACAGCGGAAGGTACAGA +
Preference number: 4 (lower is better)
Translates to: PAGVHLPPSRVETQDQPASSQAR*HSGRYR
Trigger: TCTGTACCTTCCGCTGTGTCAACGTGCCTGGGAGCT...AGCTGGTTGGTCTTGAGTCTCTACCCTAGAGGGAGGGAGATGCACCCCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp TGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTAGCCCCCACCTGGCCACACTaGGGGCAGCTGTCGGCTACT +
Preference number: 4 (lower is better)
Translates to: WSSEAPYGCFQFAGHHLAPTWPH*GQLSAT
Trigger: AGTAGCCGACAGCTGCCCGCAGTGTGGCCAGGTGGG...GGCTAGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp TTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGGCCGTAGTAGCTTCTaGCTCTGCCACCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LQSHSKKPLRSGAAAHRPGRSSF*LCHLLV
Trigger: GACCAGGAGGTGGCAGAGGCAGAAGCTACTACGGCC...TGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp TTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGGGGCCCTCTGCACCTaGCTGGACCTCGTTCACAAT +
Preference number: 4 (lower is better)
Translates to: LQSHSKKPLRSGAAAHRPGALCT*LDLVHN
Trigger: ATTGTGAACGAGGTCCAGGCAGGTGCAGAGGGCCCC...TGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp TGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTAGCCTTTGGCCTGCACAGGTaGTGGGGGACCCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: WSSEAPYGCFQFAGHHLAFGLHR*WGTQGS
Trigger: GCTGCCCTGGGTCCCCCAGCACCTGTGCAGGCCAAA...GGCTAGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp TTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCACCAGCCTTCCAGGACTaGCTGCTGTTGGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LQSHSKKPLRSGAAAHRPPAFQD*LLLVAQ
Trigger: CTGAGCCACCAACAGCAGGCAGTCCTGGAAGGCTGG...TGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGGCATCACCTGGAGGTATCATTGTCCTCTaGTCCACAGGTCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: AKSHLGVAQLPTAQASPGGIIVL*STGLTL
Trigger: GAGGGTGAGACCTGTGGAGCAGAGGACAATGATACC...TCCAGGTGATGCCTGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp CCTGCTGGGGTGCATCTCCCTCCCTCTAGGGTAGAGACTCAAGACCAACCAGCTCCATCTCTGAAACTCTaGGAGGAGCAGCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: PAGVHLPPSRVETQDQPAPSLKL*EEQPRA
Trigger: AGCCCGAGGCTGCTCCTCGCAGAGTTTCAGAGATGG...AGCTGGTTGGTCTTGAGTCTCTACCCTAGAGGGAGGGAGATGCACCCCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp TTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGCCCGGGTGCACGTGTaGAGGTCTGTCACACACTCA +
Preference number: 4 (lower is better)
Translates to: LQSHSKKPLRSGAAAHRPARVHV*RSVTHS
Trigger: TGAGTGTGTGACAGACCTGCACACGTGCACCCGGGC...TGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp TGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTAGCCGGCGTGTTCACACAGTaGTCGGCCCGGGTGCACGTG +
Preference number: 4 (lower is better)
Translates to: WSSEAPYGCFQFAGHHLAGVFTQ*SARVHV
Trigger: CACGTGCACCCGGGCCGAGCACTGTGTGAACACGCC...GGCTAGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTGGCGTGTTCACACAGTaGTCGGCCCGGGTGCACGTG +
Preference number: 4 (lower is better)
Translates to: GVEFRSPLWLFPVCRSPSGVFTQ*SARVHV
Trigger: CACGTGCACCCGGGCCGAGCACTGTGTGAACACGCC...AGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp CCTGCTGGGGTGCATCTCCCTCCCTCTAGGGTAGAGACTCAAGACCAACCAGCTTTGCCCTCGGGGTCCTaGAAGAAGCCATCCATGCAG +
Preference number: 4 (lower is better)
Translates to: PAGVHLPPSRVETQDQPALPSGS*KKPSMQ
Trigger: CTGCATGGATGGCTTCTTGCAGGACCCCGAGGGCAA...AGCTGGTTGGTCTTGAGTCTCTACCCTAGAGGGAGGGAGATGCACCCCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GACCAGGCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTACCCTCGCCACAGCGATaGACACCTGTCTCACACTCA +
Preference number: 4 (lower is better)
Translates to: DQAGLELRDLPTSASPVLPSPQR*TPVSHS
Trigger: TGAGTGTGAGACAGGTGTGCATCGCTGTGGCGAGGG...TAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGCCTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp TTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCACCCTTGCTCTGGGCATaGACACTGGTAGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LQSHSKKPLRSGAAAHRPPLLWA*TLVAPR
Trigger: CCTGGGAGCTACCAGTGTGCATGCCCAGAGCAAGGG...TGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTCTTGCCACCACCGGGTaGGCAGGAGCACTCGGTGCT +
Preference number: 4 (lower is better)
Translates to: GVEFRSPLWLFPVCRSPSLATTG*AGALGA
Trigger: AGCACCGAGTGCTCCTGCCCACCCGGTGGTGGCAAG...AGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTTGGACACAGCCCACCTaGCCACACTGCGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GVEFRSPLWLFPVCRSPSWTQPT*PHCGQL
Trigger: CAGCTGCCCGCAGTGTGGCCAGGTGGGCTGTGTCCA...AGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAGGATTAGGGCAGCAGCTGCTGTaGGTCTGGGAAGGGCAACTG +
Preference number: 4 (lower is better)
Translates to: AGLELRDLPTSASPVLGLGQQLL*VWEGQL
Trigger: CAGTTGCCCTTCCCAGACCCACAGCAGCTGCTGCCC...TAATCCTAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp TTCCAGTTTGCAGGTCACCATCTAGCCTCGGGTGACCCTGGCCTGTACTCAGTGAGCCCAGGTTGGGGTTaGACTCACAGGACTGGCCCT +
Preference number: 4 (lower is better)
Translates to: FQFAGHHLASGDPGLYSVSPGWG*THRTGP
Trigger: AGGGCCAGTCCTGTGAGTCCAACCCCAACCTGGGCT...CACTGAGTACAGGCCAGGGTCACCCGAGGCTAGATGGTGACCTGCAAACTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp TTCCAGTTTGCAGGTCACCATCTAGCCTCGGGTGACCCTGGCCTGTACTCAGTGGCACCGGCAGTGGGATaGTGTTGGGAGATACCTGGG +
Preference number: 4 (lower is better)
Translates to: FQFAGHHLASGDPGLYSVAPAVG*CWEIPG
Trigger: CCCAGGTATCTCCCAACACCATCCCACTGCCGGTGC...CACTGAGTACAGGCCAGGGTCACCCGAGGCTAGATGGTGACCTGCAAACTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp CCTGCTGGGGTGCATCTCCCTCCCTCTAGGGTAGAGACTCAAGACCAACCAGCTGCCTCAGAGCAGTTGTaGGTGCCCAGTGCACACTCA +
Preference number: 4 (lower is better)
Translates to: PAGVHLPPSRVETQDQPAASEQL*VPSAHS
Trigger: TGAGTGTGCACTGGGCACCCACAACTGCTCTGAGGC...AGCTGGTTGGTCTTGAGTCTCTACCCTAGAGGGAGGGAGATGCACCCCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR TCA 90 bp TTCCAGTTTGCAGGTCACCATCTAGCCTCGGGTGACCCTGGCCTGTACTCAGTGGGACCTCAGGCACTATaGGGGGCTCTTCACCTTCAC +
Preference number: 4 (lower is better)
Translates to: FQFAGHHLASGDPGLYSVGPQAL*GALHLH
Trigger: GTGAAGGTGAAGAGCCCCTCATAGTGCCTGAGGTCC...CACTGAGTACAGGCCAGGGTCACCCGAGGCTAGATGGTGACCTGCAAACTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR TCA 90 bp TTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAAGCCTGGCTCACAGGTaGGCGCCTTGTAGCATTGGA +
Preference number: 4 (lower is better)
Translates to: LQSHSKKPLRSGAAAHRPSLAHR*APCSIG
Trigger: TCCAATGCTACAAGGCGCTCACCTGTGAGCCAGGCT...TGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR TCA 90 bp CCTGCTGGGGTGCATCTCCCTCCCTCTAGGGTAGAGACTCAAGACCAACCAGCTCTTGGTGTTCTGGCATaGGAAGCCTGCCTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: PAGVHLPPSRVETQDQPALGVLA*EACLAV
Trigger: AACTGCCAGGCAGGCTTCTCATGCCAGAACACCAAG...AGCTGGTTGGTCTTGAGTCTCTACCCTAGAGGGAGGGAGATGCACCCCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR TCA 90 bp TTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAAGCTCCCAGGCACGTTaGCACAGCGGAAGGTACAGA +
Preference number: 4 (lower is better)
Translates to: LQSHSKKPLRSGAAAHRPSSQAR*HSGRYR
Trigger: TCTGTACCTTCCGCTGTGTCAACGTGCCTGGGAGCT...TGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp TTCCAGTTTGCAGGTCACCATCTAGCCTCGGGTGACCCTGGCCTGTACTCAGTGCCATCTCTGAAACTCTaGGAGGAGCAGCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: FQFAGHHLASGDPGLYSVPSLKL*EEQPRA
Trigger: AGCCCGAGGCTGCTCCTCGCAGAGTTTCAGAGATGG...CACTGAGTACAGGCCAGGGTCACCCGAGGCTAGATGGTGACCTGCAAACTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTAGTGCTCGGCCCGGGTaGACGTGTGCAGGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: GVEFRSPLWLFPVCRSPSSARPG*TCAGLS
Trigger: TGACAGACCTGCACACGTGCACCCGGGCCGAGCACT...AGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTGTGTTCTCACATGTGTaGTGGCACAGGCGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: GVEFRSPLWLFPVCRSPSVFSHV*WHRRPG
Trigger: GCCGGGCCGCCTGTGCCAGCACACATGTGAGAACAC...AGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp CCTGCTGGGGTGCATCTCCCTCCCTCTAGGGTAGAGACTCAAGACCAACCAGCTGTTGTGGGTGCCCAGTaGACACTCATCCAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: PAGVHLPPSRVETQDQPAVVGAQ*TLIQVL
Trigger: AAGGACCTGGATGAGTGTGCACTGGGCACCCACAAC...AGCTGGTTGGTCTTGAGTCTCTACCCTAGAGGGAGGGAGATGCACCCCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp CCTGCTGGGGTGCATCTCCCTCCCTCTAGGGTAGAGACTCAAGACCAACCAGCTGGGCACAGCATGAACTaGCAGCTGATCTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: PAGVHLPPSRVETQDQPAGHSMN*QLILPP
Trigger: TGGTGGCAAGATCAGCTGCCAGTTCATGCTGTGCCC...AGCTGGTTGGTCTTGAGTCTCTACCCTAGAGGGAGGGAGATGCACCCCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp TTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCATACTTACGGCCACTGTaGACACAGCCCACCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LQSHSKKPLRSGAAAHRPYLRPL*TQPTWP
Trigger: TGGCCAGGTGGGCTGTGTCCACAGTGGCCGTAAGTA...TGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTCAGCTGCTGTGGGTCTaGGAAGGGCAACTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GVEFRSPLWLFPVCRSPSQLLWV*EGQLAR
Trigger: CCTGGCCAGTTGCCCTTCCCAGACCCACAGCAGCTG...AGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp TTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCACAGGGAAACCAGGTCTaGCTGGGGATCTTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LQSHSKKPLRSGAAAHRPQGNQV*LGILWA
Trigger: TGCCCACAAGATCCCCAGCCAGACCTGGTTTCCCTG...TGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GACCAGGCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTATCAGCCTCCTTCTCCTaGACAGGGAAACCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: DQAGLELRDLPTSASPVLSASFS*TGKPGL
Trigger: CAGACCTGGTTTCCCTGTCCAGGAGAAGGAGGCTGA...TAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGCCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAGGATTAGTCAGTGGCCAGAGATaGACTGAGAGCAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: AGLELRDLPTSASPVLGLVSGQR*TESSQA
Trigger: GGCCTGGCTGCTCTCAGTCCATCTCTGGCCACTGAC...TAATCCTAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp TGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTAGCCTCGATGGCCCACTGCTaGCCCGCTGCACAACAGGTC +
Preference number: 4 (lower is better)
Translates to: WSSEAPYGCFQFAGHHLASMAHC*PAAQQV
Trigger: GACCTGTTGTGCAGCGGGCCAGCAGTGGGCCATCGA...GGCTAGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGGCATCACCTGGATTCTCGGGGATCTCCTaGCACTCATCATTGTCGATG +
Preference number: 4 (lower is better)
Translates to: AKSHLGVAQLPTAQASPGFSGIS*HSSLSM
Trigger: CATCGACAATGATGAGTGCCAGGAGATCCCCGAGAA...TCCAGGTGATGCCTGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp CCTGCTGGGGTGCATCTCCCTCCCTCTAGGGTAGAGACTCAAGACCAACCAGCTGCAGTGGGATGGTGTTaGGAGATACCTGGGCAGACT +
Preference number: 4 (lower is better)
Translates to: PAGVHLPPSRVETQDQPAAVGWC*EIPGQT
Trigger: AGTCTGCCCAGGTATCTCCCAACACCATCCCACTGC...AGCTGGTTGGTCTTGAGTCTCTACCCTAGAGGGAGGGAGATGCACCCCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp TTCCAGTTTGCAGGTCACCATCTAGCCTCGGGTGACCCTGGCCTGTACTCAGTGATGTTGGCACATTCCTaGCTGCAGCGCCGAGTCTCG +
Preference number: 4 (lower is better)
Translates to: FQFAGHHLASGDPGLYSVMLAHS*LQRRVS
Trigger: CGAGACTCGGCGCTGCAGCCAGGAATGTGCCAACAT...CACTGAGTACAGGCCAGGGTCACCCGAGGCTAGATGGTGACCTGCAAACTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGGCATCACCTGGATGTATACCCTTGCTCTaGGCATGCACACTGGTAGCT +
Preference number: 4 (lower is better)
Translates to: AKSHLGVAQLPTAQASPGCIPLL*ACTLVA
Trigger: AGCTACCAGTGTGCATGCCCAGAGCAAGGGTATACA...TCCAGGTGATGCCTGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp TTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGCCTCAGAGCAGTTGTaGGTGCCCAGTGCACACTCA +
Preference number: 4 (lower is better)
Translates to: LQSHSKKPLRSGAAAHRPASEQL*VPSAHS
Trigger: TGAGTGTGCACTGGGCACCCACAACTGCTCTGAGGC...TGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GACCAGGCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAGTAGTGACAGAGCCCTaGCGCCAAAGCTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: DQAGLELRDLPTSASPVLVVTEP*RQSFIS
Trigger: GGAGATGAAGCTTTGGCGCCAGGGCTCTGTCACTAC...TAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGCCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR TCA 90 bp TTCCAGTTTGCAGGTCACCATCTAGCCTCGGGTGACCCTGGCCTGTACTCAGTGGAAGCTGGTAGCAAATaGGCTCACCACCAGCGTCAG +
Preference number: 4 (lower is better)
Translates to: FQFAGHHLASGDPGLYSVEAGSK*AHHQRQ
Trigger: CTGACGCTGGTGGTGAGCTCATTTGCTACCAGCTTC...CACTGAGTACAGGCCAGGGTCACCCGAGGCTAGATGGTGACCTGCAAACTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR TCA 90 bp CCTGCTGGGGTGCATCTCCCTCCCTCTAGGGTAGAGACTCAAGACCAACCAGCTCGAGCTGGTGAGGTTTaGCATTCCGTGATATCCTGG +
Preference number: 4 (lower is better)
Translates to: PAGVHLPPSRVETQDQPARAGEV*HSVISW
Trigger: CCAGGATATCACGGAATGTCAAACCTCACCAGCTCG...AGCTGGTTGGTCTTGAGTCTCTACCCTAGAGGGAGGGAGATGCACCCCAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR TCA 90 bp TTCCAGTTTGCAGGTCACCATCTAGCCTCGGGTGACCCTGGCCTGTACTCAGTGCCTCATTGCCCTTCGTaGTGGTCAGGGAGATGGTGT +
Preference number: 4 (lower is better)
Translates to: FQFAGHHLASGDPGLYSVPHCPS*WSGRWC
Trigger: ACACCATCTCCCTGACCATCACGAAGGGCAATGAGG...CACTGAGTACAGGCCAGGGTCACCCGAGGCTAGATGGTGACCTGCAAACTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GACCAGGCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAAGGAGCACTCGGTGCTaGCAAAGTCCACAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: DQAGLELRDLPTSASPVLRSTRC*QSPQSR
Trigger: CCTACTTTGTGGACTTTGGCAGCACCGAGTGCTCCT...TAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGCCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp TTCCAGTTTGCAGGTCACCATCTAGCCTCGGGTGACCCTGGCCTGTACTCAGTGGGCAGGAGCACTCGGTaGTGCCAAAGTCCACAAAGT +
Preference number: 4 (lower is better)
Translates to: FQFAGHHLASGDPGLYSVGRSTR*CQSPQS
Trigger: ACTTTGTGGACTTTGGCAGCACCGAGTGCTCCTGCC...CACTGAGTACAGGCCAGGGTCACCCGAGGCTAGATGGTGACCTGCAAACTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGGCATCACCTGGACTACTACAGCTTCAATaGAGTTGGGTGGTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: AKSHLGVAQLPTAQASPGLLQLQ*SWVVAQ
Trigger: CTGAGCTACCACCCAACTGCATTGAAGCTGTAGTAG...TCCAGGTGATGCCTGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAGGATTACCTTCCAGGACTGCCTaGTGTTGGTGGCTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: AGLELRDLPTSASPVLGLPSRTA*CWWLSD
Trigger: GTCACTGAGCCACCAACAGCAGGCAGTCCTGGAAGG...TAATCCTAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTCCAGCCTTCCAGGACTaGCTGCTGTTGGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GVEFRSPLWLFPVCRSPSPAFQD*LLLVAQ
Trigger: CTGAGCCACCAACAGCAGGCAGTCCTGGAAGGCTGG...AGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGGCATCACCTGGACTTTCAAGTAGGAGATaGAGCATTGCCTCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: AKSHLGVAQLPTAQASPGLSSRR*SIASGL
Trigger: TAGCCCAGAGGCAATGCTGCATCTCCTACTTGAAAG...TCCAGGTGATGCCTGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAGGATTATACTTACGGCCACTGTaGACACAGCCCACCTGGCCA +
Preference number: 4 (lower is better)
Translates to: AGLELRDLPTSASPVLGLYLRPL*TQPTWP
Trigger: TGGCCAGGTGGGCTGTGTCCACAGTGGCCGTAAGTA...TAATCCTAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTTGGCTGGGGATCTTGTaGGCAGGCTGTCCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GVEFRSPLWLFPVCRSPSWLGIL*AGCPAF
Trigger: GAAGGCTGGACAGCCTGCCCACAAGATCCCCAGCCA...AGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTGTCAGTGGCCAGAGATaGACTGAGAGCAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GVEFRSPLWLFPVCRSPSVSGQR*TESSQA
Trigger: GGCCTGGCTGCTCTCAGTCCATCTCTGGCCACTGAC...AGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp TGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTAGCCAGCCCAGGTTGGGGTTaGACTCACAGGACTGGCCCT +
Preference number: 4 (lower is better)
Translates to: WSSEAPYGCFQFAGHHLASPGWG*THRTGP
Trigger: AGGGCCAGTCCTGTGAGTCCAACCCCAACCTGGGCT...GGCTAGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTCTCCCGGCAGGCTATTaGGCAGTTCAGCCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: GVEFRSPLWLFPVCRSPSLPAGY*AVQPLC
Trigger: GCACAGAGGCTGAACTGCCCAATAGCCTGCCGGGAG...AGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp TTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAATCAGGCACTCATCCTaGTCATCTCCCGGCAGGCTA +
Preference number: 4 (lower is better)
Translates to: LQSHSKKPLRSGAAAHRPIRHSS*SSPGRL
Trigger: TAGCCTGCCGGGAGATGACCAGGATGAGTGCCTGAT...TGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR TCA 90 bp GCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAGGATTACTTTACTGGGTCCTCTaGAGAGCTGTCAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: AGLELRDLPTSASPVLGLLYWVL*RAVSGQ
Trigger: CTGGCCACTGACAGCTCTTCAGAGGACCCAGTAAAG...TAATCCTAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp TTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAAGGAGCACTCGGTGCTaGCAAAGTCCACAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: LQSHSKKPLRSGAAAHRPRSTRC*QSPQSR
Trigger: CCTACTTTGTGGACTTTGGCAGCACCGAGTGCTCCT...TGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAGGATTAGGCAGGAGCACTCGGTaGTGCCAAAGTCCACAAAGT +
Preference number: 4 (lower is better)
Translates to: AGLELRDLPTSASPVLGLGRSTR*CQSPQS
Trigger: ACTTTGTGGACTTTGGCAGCACCGAGTGCTCCTGCC...TAATCCTAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTCCTTCCAGGACTGCCTaGTGTTGGTGGCTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: GVEFRSPLWLFPVCRSPSPSRTA*CWWLSD
Trigger: GTCACTGAGCCACCAACAGCAGGCAGTCCTGGAAGG...AGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTTTGCCCTCGGGGTCCTaGAAGAAGCCATCCATGCAG +
Preference number: 4 (lower is better)
Translates to: GVEFRSPLWLFPVCRSPSLPSGS*KKPSMQ
Trigger: CTGCATGGATGGCTTCTTGCAGGACCCCGAGGGCAA...AGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp TGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTAGCCCCCTCGCCACAGCGATaGACACCTGTCTCACACTCA +
Preference number: 4 (lower is better)
Translates to: WSSEAPYGCFQFAGHHLAPSPQR*TPVSHS
Trigger: TGAGTGTGAGACAGGTGTGCATCGCTGTGGCGAGGG...GGCTAGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GTAGCCATAGTTGAGGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGTGTTCTCACATGTGTaGTGGCACAGGCGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: VAIVEEWSSEAPYGCFQFVFSHV*WHRRPG
Trigger: GCCGGGCCGCCTGTGCCAGCACACATGTGAGAACAC...AAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCCTCAACTATGGCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGGCATCACCTGGACATCTTCACAATGTTTaGCATCTGCGGCCAAAAGGA +
Preference number: 4 (lower is better)
Translates to: AKSHLGVAQLPTAQASPGHLHNV*HLRPKG
Trigger: TCCTTTTGGCCGCAGATGGCAAACATTGTGAAGATG...TCCAGGTGATGCCTGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAGGATTACAGAGCAGTTGTGGGTaGCCAGTGCACACTCATCCA +
Preference number: 4 (lower is better)
Translates to: AGLELRDLPTSASPVLGLQSSCG*PVHTHP
Trigger: TGGATGAGTGTGCACTGGGCACCCACAACTGCTCTG...TAATCCTAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp TTCCAGTTTGCAGGTCACCATCTAGCCTCGGGTGACCCTGGCCTGTACTCAGTGCAGCTTCAATGCAGTTaGGTGGTAGCTCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: FQFAGHHLASGDPGLYSVQLQCS*VVAQGT
Trigger: TGTGCCCTGAGCTACCACCCAACTGCATTGAAGCTG...CACTGAGTACAGGCCAGGGTCACCCGAGGCTAGATGGTGACCTGCAAACTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp TTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCATCTGGGAAGGGCAACTaGCCAGGGTGTTACTCTGAT +
Preference number: 4 (lower is better)
Translates to: LQSHSKKPLRSGAAAHRPSGKGN*PGCYSD
Trigger: ATCAGAGTAACACCCTGGCCAGTTGCCCTTCCCAGA...TGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp TGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTAGCCACTCATCATTGTCGATaGCCCACTGCTGGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: WSSEAPYGCFQFAGHHLATHHCR*PTAGPL
Trigger: CAGCGGGCCAGCAGTGGGCCATCGACAATGATGAGT...GGCTAGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GTAGCCATAGTTGAGGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTTTGGACTCACAGGACTaGCCCTCAGCCCGCACTCGG +
Preference number: 4 (lower is better)
Translates to: VAIVEEWSSEAPYGCFQFLDSQD*PSARTR
Trigger: CCGAGTGCGGGCTGAGGGCCAGTCCTGTGAGTCCAA...AAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCCTCAACTATGGCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GTTAAGTTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCTCCCGGCAGGCTATTaGGCAGTTCAGCCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: VKLQSHSKKPLRSGAAAHLPAGY*AVQPLC
Trigger: GCACAGAGGCTGAACTGCCCAATAGCCTGCCGGGAG...GTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAACTTAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp TTCCAGTTTGCAGGTCACCATCTAGCCTCGGGTGACCCTGGCCTGTACTCAGTGTTGATGCAAAGATGCTaGCAAAGCTCCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: FQFAGHHLASGDPGLYSVLMQRC*QSSPGS
Trigger: GCTCCCTGGGGAGCTTTGCCAGCATCTTTGCATCAA...CACTGAGTACAGGCCAGGGTCACCCGAGGCTAGATGGTGACCTGCAAACTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTCTGTGGCACCGGCAGTaGGATGGTGTTGGGAGATAC +
Preference number: 4 (lower is better)
Translates to: GVEFRSPLWLFPVCRSPSLWHRQ*DGVGRY
Trigger: GTATCTCCCAACACCATCCCACTGCCGGTGCCACAG...AGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp TTCCAGTTTGCAGGTCACCATCTAGCCTCGGGTGACCCTGGCCTGTACTCAGTGGCATTGGAAGGAACCTaGCGTGTTCACACAGTGCTC +
Preference number: 4 (lower is better)
Translates to: FQFAGHHLASGDPGLYSVALEGT*RVHTVL
Trigger: GAGCACTGTGTGAACACGCCAGGTTCCTTCCAATGC...CACTGAGTACAGGCCAGGGTCACCCGAGGCTAGATGGTGACCTGCAAACTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp TTCCAGTTTGCAGGTCACCATCTAGCCTCGGGTGACCCTGGCCTGTACTCAGTGAGGAGCCATAGATGTTaGCACATTCCTGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FQFAGHHLASGDPGLYSVRSHRC*HIPGCS
Trigger: GCTGCAGCCAGGAATGTGCCAACATCTATGGCTCCT...CACTGAGTACAGGCCAGGGTCACCCGAGGCTAGATGGTGACCTGCAAACTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GACCAGGCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTATGTATACCCTTGCTCTaGGCATGCACACTGGTAGCT +
Preference number: 4 (lower is better)
Translates to: DQAGLELRDLPTSASPVLCIPLL*ACTLVA
Trigger: AGCTACCAGTGTGCATGCCCAGAGCAAGGGTATACA...TAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGCCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp CCTGCTGGGGTGCATCTCCCTCCCTCTAGGGTAGAGACTCAAGACCAACCAGCTTGCAGGACCTCCCGTTaGCCATCATTGTATACCCTT +
Preference number: 4 (lower is better)
Translates to: PAGVHLPPSRVETQDQPACRTSR*PSLYTL
Trigger: AAGGGTATACAATGATGGCCAACGGGAGGTCCTGCA...AGCTGGTTGGTCTTGAGTCTCTACCCTAGAGGGAGGGAGATGCACCCCAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAGGATTACTCCCCTGGATATTGTaGCAGGTCTCAGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: AGLELRDLPTSASPVLGLLPWIL*QVSASE
Trigger: CTCTGAGGCTGAGACCTGCCACAATATCCAGGGGAG...TAATCCTAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GACCAGGCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAACGGACATAGTTGGGTaGACAATCAAAGCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: DQAGLELRDLPTSASPVLTDIVG*TIKAQA
Trigger: TGCCTGCGCTTTGATTGTCCACCCAACTATGTCCGT...TAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGCCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp CCTGCTGGGGTGCATCTCCCTCCCTCTAGGGTAGAGACTCAAGACCAACCAGCTACGGACATAGTTGGGTaGACAATCAAAGCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PAGVHLPPSRVETQDQPATDIVG*TIKAQA
Trigger: TGCCTGCGCTTTGATTGTCCACCCAACTATGTCCGT...AGCTGGTTGGTCTTGAGTCTCTACCCTAGAGGGAGGGAGATGCACCCCAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp TGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTAGCCAGGGCCCATTGTCTTTaGAGGTGTTGGGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: WSSEAPYGCFQFAGHHLARAHCL*RCWAVA
Trigger: TGCCACAGCCCAACACCTGCAAAGACAATGGGCCCT...GGCTAGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTAGGGCCCATTGTCTTTaGAGGTGTTGGGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: GVEFRSPLWLFPVCRSPSRAHCL*RCWAVA
Trigger: TGCCACAGCCCAACACCTGCAAAGACAATGGGCCCT...AGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp TTCCAGTTTGCAGGTCACCATCTAGCCTCGGGTGACCCTGGCCTGTACTCAGTGGAGGATATAGCCCTCTaGACACAGCACTGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: FQFAGHHLASGDPGLYSVEDIAL*TQHCVV
Trigger: AACCACACAGTGCTGTGTGCAGAGGGCTATATCCTC...CACTGAGTACAGGCCAGGGTCACCCGAGGCTAGATGGTGACCTGCAAACTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041544.8
CDS-3UTR GCA 90 bp GTAGCCATAGTTGAGGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTCCCTTGCTCTGGGCATaGACACTGGTAGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: VAIVEEWSSEAPYGCFQFPLLWA*TLVAPR
Trigger: CCTGGGAGCTACCAGTGTGCATGCCCAGAGCAAGGG...AAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCCTCAACTATGGCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp CCTGCTGGGGTGCATCTCCCTCCCTCTAGGGTAGAGACTCAAGACCAACCAGCTATCATTGTATACCCTTaGTCTGGGCATGCACACTGG +
Preference number: 4 (lower is better)
Translates to: PAGVHLPPSRVETQDQPAIIVYP*SGHAHW
Trigger: CCAGTGTGCATGCCCAGAGCAAGGGTATACAATGAT...AGCTGGTTGGTCTTGAGTCTCTACCCTAGAGGGAGGGAGATGCACCCCAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp TGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTAGCCGTTGTGGGTGCCCAGTaGACACTCATCCAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: WSSEAPYGCFQFAGHHLAVVGAQ*TLIQVL
Trigger: AAGGACCTGGATGAGTGTGCACTGGGCACCCACAAC...GGCTAGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp TGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTAGCCCAGAGCAGTTGTGGGTaGCCAGTGCACACTCATCCA +
Preference number: 4 (lower is better)
Translates to: WSSEAPYGCFQFAGHHLAQSSCG*PVHTHP
Trigger: TGGATGAGTGTGCACTGGGCACCCACAACTGCTCTG...GGCTAGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAGGATTATATCCTGGCATGTGGTaGGCTCGCACTTCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: AGLELRDLPTSASPVLGLYPGMW*ARTSFL
Trigger: CAGAAACGAAGTGCGAGCGCACCACATGCCAGGATA...TAATCCTAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAGGATTATCTGGGAAGGGCAACTaGCCAGGGTGTTACTCTGAT +
Preference number: 4 (lower is better)
Translates to: AGLELRDLPTSASPVLGLSGKGN*PGCYSD
Trigger: ATCAGAGTAACACCCTGGCCAGTTGCCCTTCCCAGA...TAATCCTAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp TGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTAGCCTCAGCCTCCTTCTCCTaGACAGGGAAACCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: WSSEAPYGCFQFAGHHLASASFS*TGKPGL
Trigger: CAGACCTGGTTTCCCTGTCCAGGAGAAGGAGGCTGA...GGCTAGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTATCAGGCACTCATCCTaGTCATCTCCCGGCAGGCTA +
Preference number: 4 (lower is better)
Translates to: GVEFRSPLWLFPVCRSPSIRHSS*SSPGRL
Trigger: TAGCCTGCCGGGAGATGACCAGGATGAGTGCCTGAT...AGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAGGATTATTGATGCAAAGATGCTaGCAAAGCTCCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: AGLELRDLPTSASPVLGLLMQRC*QSSPGS
Trigger: GCTCCCTGGGGAGCTTTGCCAGCATCTTTGCATCAA...TAATCCTAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTGCAGTGGGATGGTGTTaGGAGATACCTGGGCAGACT +
Preference number: 4 (lower is better)
Translates to: GVEFRSPLWLFPVCRSPSAVGWC*EIPGQT
Trigger: AGTCTGCCCAGGTATCTCCCAACACCATCCCACTGC...AGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp TTCCAGTTTGCAGGTCACCATCTAGCCTCGGGTGACCCTGGCCTGTACTCAGTGAGTAGAAGGAGCCCTTaGTGTTCTGGCATGAGAAGC +
Preference number: 4 (lower is better)
Translates to: FQFAGHHLASGDPGLYSVSRRSP*CSGMRS
Trigger: GCTTCTCATGCCAGAACACCAAGGGCTCCTTCTACT...CACTGAGTACAGGCCAGGGTCACCCGAGGCTAGATGGTGACCTGCAAACTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GTTAAGTTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACATGTTGGCACATTCCTaGCTGCAGCGCCGAGTCTCG +
Preference number: 4 (lower is better)
Translates to: VKLQSHSKKPLRSGAAAHMLAHS*LQRRVS
Trigger: CGAGACTCGGCGCTGCAGCCAGGAATGTGCCAACAT...GTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAACTTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAGGATTACAGCGGAAACTCCCCTaGATATTGTGGCAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: AGLELRDLPTSASPVLGLQRKLP*ILWQVS
Trigger: TGAGACCTGCCACAATATCCAGGGGAGTTTCCGCTG...TAATCCTAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR TCA 90 bp GTTAAGTTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACGAAGCTGGTAGCAAATaGGCTCACCACCAGCGTCAG +
Preference number: 4 (lower is better)
Translates to: VKLQSHSKKPLRSGAAAHEAGSK*AHHQRQ
Trigger: CTGACGCTGGTGGTGAGCTCATTTGCTACCAGCTTC...GTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAACTTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR TCA 90 bp CCTGCTGGGGTGCATCTCCCTCCCTCTAGGGTAGAGACTCAAGACCAACCAGCTCTGTCACACACTCATTaGTGTCCACACACTTCCTAT +
Preference number: 4 (lower is better)
Translates to: PAGVHLPPSRVETQDQPALSHTH*CPHTSY
Trigger: ATAGGAAGTGTGTGGACATCAATGAGTGTGTGACAG...AGCTGGTTGGTCTTGAGTCTCTACCCTAGAGGGAGGGAGATGCACCCCAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041544.8
CDS-3UTR TCA 90 bp GGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTTGCATTCACCATCTGTaGGGACATAGCCTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: GVEFRSPLWLFPVCRSPSCIHHL*GHSLAH
Trigger: GTGAGCCAGGCTATGTCCTCACAGATGGTGAATGCA...AGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR TCA 90 bp GTTAAGTTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCTTGGTGTTCTGGCATaGGAAGCCTGCCTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: VKLQSHSKKPLRSGAAAHLGVLA*EACLAV
Trigger: AACTGCCAGGCAGGCTTCTCATGCCAGAACACCAAG...GTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAACTTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR TCA 90 bp TGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTAGCCCGAGCTGGTGAGGTTTaGCATTCCGTGATATCCTGG +
Preference number: 4 (lower is better)
Translates to: WSSEAPYGCFQFAGHHLARAGEV*HSVISW
Trigger: CCAGGATATCACGGAATGTCAAACCTCACCAGCTCG...GGCTAGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR TCA 90 bp TTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCACTGTCACACACTCATTaGTGTCTTCACAGGACACAC +
Preference number: 4 (lower is better)
Translates to: LQSHSKKPLRSGAAAHRPLSHTH*CLHRTH
Trigger: GTGTGTCCTGTGAAGACATCAATGAGTGTGTGACAG...TGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTTATCCTGGCATGTGGTaGGCTCGCACTTCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: GVEFRSPLWLFPVCRSPSYPGMW*ARTSFL
Trigger: CAGAAACGAAGTGCGAGCGCACCACATGCCAGGATA...AGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GTAGCCATAGTTGAGGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTCAGGGAAACCAGGTCTaGCTGGGGATCTTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: VAIVEEWSSEAPYGCFQFQGNQV*LGILWA
Trigger: TGCCCACAAGATCCCCAGCCAGACCTGGTTTCCCTG...AAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCCTCAACTATGGCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GTTAAGTTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACAGGGATAGCCCAGGTTaGGGTTGGACTCACAGGACT +
Preference number: 4 (lower is better)
Translates to: VKLQSHSKKPLRSGAAAHRDSPG*GWTHRT
Trigger: AGTCCTGTGAGTCCAACCCCAACCTGGGCTATCCCT...GTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAACTTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GTAGCCATAGTTGAGGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTCTGTGGCACCGGCAGTaGGATGGTGTTGGGAGATAC +
Preference number: 4 (lower is better)
Translates to: VAIVEEWSSEAPYGCFQFLWHRQ*DGVGRY
Trigger: GTATCTCCCAACACCATCCCACTGCCGGTGCCACAG...AAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCCTCAACTATGGCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GTTAAGTTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACGTAGTGACAGAGCCCTaGCGCCAAAGCTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: VKLQSHSKKPLRSGAAAHVVTEP*RQSFIS
Trigger: GGAGATGAAGCTTTGGCGCCAGGGCTCTGTCACTAC...GTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAACTTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GTTAAGTTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACGGTATCATTGTCCTCTaGTCCACAGGTCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: VKLQSHSKKPLRSGAAAHGIIVL*STGLTL
Trigger: GAGGGTGAGACCTGTGGAGCAGAGGACAATGATACC...GTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAACTTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GTTAAGTTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACGTGTTGATGCAAAGATaGTGGCAAAGCTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: VKLQSHSKKPLRSGAAAHVLMQR*WQSSPG
Trigger: CCCTGGGGAGCTTTGCCAGCATCTTTGCATCAACAC...GTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAACTTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp TTCCAGTTTGCAGGTCACCATCTAGCCTCGGGTGACCCTGGCCTGTACTCAGTGAGCTACAATCGTGAGTaGCCATCAAACACTCGTCTT +
Preference number: 4 (lower is better)
Translates to: FQFAGHHLASGDPGLYSVSYNRE*PSNTRL
Trigger: AAGACGAGTGTTTGATGGGCACTCACGATTGTAGCT...CACTGAGTACAGGCCAGGGTCACCCGAGGCTAGATGGTGACCTGCAAACTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041544.8
CDS-3UTR GCA 90 bp GACCAGGCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAATTCGTTCACATCAATaGAAGTCCTGCCGAATGCAT +
Preference number: 4 (lower is better)
Translates to: DQAGLELRDLPTSASPVLIRSHQ*KSCRMH
Trigger: ATGCATTCGGCAGGACTTGCATTGATGTGAACGAAT...TAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGCCTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GTAGCCATAGTTGAGGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGGGCACAGCATGAACTaGCAGCTGATCTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: VAIVEEWSSEAPYGCFQFGHSMN*QLILPP
Trigger: TGGTGGCAAGATCAGCTGCCAGTTCATGCTGTGCCC...AAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCCTCAACTATGGCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GTTAAGTTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACAGGAGCCATAGATGTTaGCACATTCCTGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VKLQSHSKKPLRSGAAAHRSHRC*HIPGCS
Trigger: GCTGCAGCCAGGAATGTGCCAACATCTATGGCTCCT...GTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAACTTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp TGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTAGCCCTACTACAGCTTCAATaGAGTTGGGTGGTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: WSSEAPYGCFQFAGHHLALLQLQ*SWVVAQ
Trigger: CTGAGCTACCACCCAACTGCATTGAAGCTGTAGTAG...GGCTAGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTCACACACTTCCTATGTaGGTTGAGGATATAGCCCTC +
Preference number: 4 (lower is better)
Translates to: GVEFRSPLWLFPVCRSPSHTLPM*VEDIAL
Trigger: GAGGGCTATATCCTCAACGCACATAGGAAGTGTGTG...AGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041544.8
CDS-3UTR CCA 90 bp GTAGCCATAGTTGAGGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTCAGCGGAAACTCCCCTaGATATTGTGGCAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: VAIVEEWSSEAPYGCFQFQRKLP*ILWQVS
Trigger: TGAGACCTGCCACAATATCCAGGGGAGTTTCCGCTG...AAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCCTCAACTATGGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GTTAAGTTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCTTTCAAGTAGGAGATaGAGCATTGCCTCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: VKLQSHSKKPLRSGAAAHLSSRR*SIASGL
Trigger: TAGCCCAGAGGCAATGCTGCATCTCCTACTTGAAAG...GTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAACTTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GTTAAGTTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACATCATTGTATACCCTTaGTCTGGGCATGCACACTGG +
Preference number: 4 (lower is better)
Translates to: VKLQSHSKKPLRSGAAAHIIVYP*SGHAHW
Trigger: CCAGTGTGCATGCCCAGAGCAAGGGTATACAATGAT...GTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAACTTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GTAGCCATAGTTGAGGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTTTCTCGGGGATCTCCTaGCACTCATCATTGTCGATG +
Preference number: 4 (lower is better)
Translates to: VAIVEEWSSEAPYGCFQFFSGIS*HSSLSM
Trigger: CATCGACAATGATGAGTGCCAGGAGATCCCCGAGAA...AAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCCTCAACTATGGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GTAGCCATAGTTGAGGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTAGTAGAAGGAGCCCTTaGTGTTCTGGCATGAGAAGC +
Preference number: 4 (lower is better)
Translates to: VAIVEEWSSEAPYGCFQFSRRSP*CSGMRS
Trigger: GCTTCTCATGCCAGAACACCAAGGGCTCCTTCTACT...AAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCCTCAACTATGGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp TGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTAGCCCAGAATGTACTGAGTTaGGGTCTATGTCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: WSSEAPYGCFQFAGHHLAQNVLS*GLCLLL
Trigger: CAGAAGAAGACATAGACCCCAACTCAGTACATTCTG...GGCTAGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GTAGCCATAGTTGAGGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTCATCTTCACAATGTTTaGCATCTGCGGCCAAAAGGA +
Preference number: 4 (lower is better)
Translates to: VAIVEEWSSEAPYGCFQFHLHNV*HLRPKG
Trigger: TCCTTTTGGCCGCAGATGGCAAACATTGTGAAGATG...AAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCCTCAACTATGGCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR GCA 90 bp GTAGCCATAGTTGAGGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTATTCGTTCACATCAATaGAAGTCCTGCCGAATGCAT +
Preference number: 4 (lower is better)
Translates to: VAIVEEWSSEAPYGCFQFIRSHQ*KSCRMH
Trigger: ATGCATTCGGCAGGACTTGCATTGATGTGAACGAAT...AAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCCTCAACTATGGCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CCA 90 bp GTAGCCATAGTTGAGGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTCAGAATGTACTGAGTTaGGGTCTATGTCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: VAIVEEWSSEAPYGCFQFQNVLS*GLCLLL
Trigger: CAGAAGAAGACATAGACCCCAACTCAGTACATTCTG...AAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCCTCAACTATGGCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 90 bp ACGCCTCCTCGATGCAGTTCTCCAGCAGGGGACACTCAGCACCTGTaGAATCCTGCCACGGGACGGCCATGCTTGGGCTCGGAGTCAGAG +
Preference number: 5 (lower is better)
Translates to: TPPRCSSPAGDTQHL*NPATGRPCLGSESE
Trigger: CTCTGACTCCGAGCCCAAGCATGGCCGTCCCGTGGCAGGATTGCACAGGTGCTGAGTGTCCCCTGCTGGAGAACTGCATCGAGGAGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
ENSMUST00000132021.2
ENSMUST00000134974.2
CDS CCA 90 bp TTCGCAGGCACAGCCCTGCTGCACACAGGTAGCACAGCAGGCTCCTaGCTCCAACGCCTCCTCGATGCAGTTCTCCAGCAGGGGACACTC +
Preference number: 5 (lower is better)
Translates to: FAGTALLHTGSTAGS*LQRLLDAVLQQGTL
Trigger: GAGTGTCCCCTGCTGGAGAACTGCATCGAGGAGGCGTTGGAGCCAGGAGCCTGCTGTGCTACCTGTGTGCAGCAGGGCTGTGCCTGCGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
ENSMUST00000132021.2
ENSMUST00000134974.2
CDS CCA 90 bp GCGTCAGGACAGTGGCAAGCCCGGCAGGATGAGAGGTGGACGGTATaGCCAGCAGCATACTTACGGCCACTGTGGACACAGCCCACCTGG +
Preference number: 5 (lower is better)
Translates to: ASGQWQARQDERWTV*PAAYLRPLWTQPTW
Trigger: CCAGGTGGGCTGTGTCCACAGTGGCCGTAAGTATGCTGCTGGCCATACCGTCCACCTCTCATCCTGCCGGGCTTGCCACTGTCCTGACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 90 bp CAGGGAGCATCAGGCACTCATCCTGGTCATCTCCCGGCAGGCTATTaGGCAGTTCAGCCTCTGTGCCCAGTGACAGGGCCTCCCGGCTTG +
Preference number: 5 (lower is better)
Translates to: QGASGTHPGHLPAGY*AVQPLCPVTGPPGL
Trigger: CAAGCCGGGAGGCCCTGTCACTGGGCACAGAGGCTGAACTGCCCAATAGCCTGCCGGGAGATGACCAGGATGAGTGCCTGATGCTCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp GCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGGCATCACCTGGAAACTGGCAGCTGATCTaGCCACCACCGGGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: AKSHLGVAQLPTAQASPGNWQLI*PPPGGQ
Trigger: CTGCCCACCCGGTGGTGGCAAGATCAGCTGCCAGTT...TCCAGGTGATGCCTGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp GCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGGCATCACCTGGAGCCATCCATGCAGCGTaGCCGGGCCTGGCAGTAGAA +
Preference number: 5 (lower is better)
Translates to: AKSHLGVAQLPTAQASPGAIHAA*PGLAVE
Trigger: TTCTACTGCCAGGCCCGGCAACGCTGCATGGATGGC...TCCAGGTGATGCCTGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 90 bp TCGATGCAGTTCTCCAGCAGGGGACACTCAGCACCTGTGCAATCCTaGCACGGGACGGCCATGCTTGGGCTCGGAGTCAGAGCTGTGACC +
Preference number: 5 (lower is better)
Translates to: SMQFSSRGHSAPVQS*HGTAMLGLGVRAVT
Trigger: GGTCACAGCTCTGACTCCGAGCCCAAGCATGGCCGTCCCGTGGCAGGATTGCACAGGTGCTGAGTGTCCCCTGCTGGAGAACTGCATCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
ENSMUST00000132021.2
ENSMUST00000134974.2
CDS GCA 90 bp GCTGGCACAGGCGGCCCGGCGAGACCCAGCATTCGTTCACATCAATaGAAGTCCTGCCGAATGCATCCCTCTGGAAGCCGGGCTTGCAGT +
Preference number: 5 (lower is better)
Translates to: AGTGGPARPSIRSHQ*KSCRMHPSGSRACS
Trigger: ACTGCAAGCCCGGCTTCCAGAGGGATGCATTCGGCAGGACTTGCATTGATGTGAACGAATGCTGGGTCTCGCCGGGCCGCCTGTGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 90 bp GATGAGAGGTGGACGGTATGGCCAGCAGCATACTTACGGCCACTGTaGACACAGCCCACCTGGCCACACTGCGGGCAGCTGTCGGCTACT +
Preference number: 5 (lower is better)
Translates to: DERWTVWPAAYLRPL*TQPTWPHCGQLSAT
Trigger: AGTAGCCGACAGCTGCCCGCAGTGTGGCCAGGTGGGCTGTGTCCACAGTGGCCGTAAGTATGCTGCTGGCCATACCGTCCACCTCTCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 90 bp GCAGGGCCCATTGTCTTTGCAGGTGTTGGGCTGTGGCACCGGCAGTaGGATGGTGTTGGGAGATACCTGGGCAGACTCAGACCTCGGTGC +
Preference number: 5 (lower is better)
Translates to: AGPIVFAGVGLWHRQ*DGVGRYLGRLRPRC
Trigger: GCACCGAGGTCTGAGTCTGCCCAGGTATCTCCCAACACCATCCCACTGCCGGTGCCACAGCCCAACACCTGCAAAGACAATGGGCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 90 bp AGCCATCCATGCAGCGTTGCCGGGCCTGGCAGTAGAAGGAGCCCTTaGTGTTCTGGCATGAGAAGCCTGCCTGGCAGTTGTGTGTGCCCG +
Preference number: 5 (lower is better)
Translates to: SHPCSVAGPGSRRSP*CSGMRSLPGSCVCP
Trigger: CGGGCACACACAACTGCCAGGCAGGCTTCTCATGCCAGAACACCAAGGGCTCCTTCTACTGCCAGGCCCGGCAACGCTGCATGGATGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp GACCAGGCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAACGGGACGGCCATGCTaGGGCTCGGAGTCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: DQAGLELRDLPTSASPVLTGRPC*GSESEL
Trigger: CAGCTCTGACTCCGAGCCCAAGCATGGCCGTCCCGT...TAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGCCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp GACCAGGCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAGTCTGGCTGGGGATCTaGTGGGCAGGCTGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: DQAGLELRDLPTSASPVLVWLGI*WAGCPA
Trigger: GGCTGGACAGCCTGCCCACAAGATCCCCAGCCAGAC...TAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGCCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp GACCAGGCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTACAGCCAGGCCTGACCTaGGCAGAGGTGCAGCACCCT +
Preference number: 5 (lower is better)
Translates to: DQAGLELRDLPTSASPVLQPGLT*AEVQHP
Trigger: AGGGTGCTGCACCTCTGCCAAGGTCAGGCCTGGCTG...TAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGCCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp GACCAGGCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTACAGGTCTCACCCTCCTaGGCTCCCATGACCCCAGCC +
Preference number: 5 (lower is better)
Translates to: DQAGLELRDLPTSASPVLQVSPS*APMTPA
Trigger: GGCTGGGGTCATGGGAGCCAAGGAGGGTGAGACCTG...TAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGCCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp GCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGGCATCACCTGGATCAGCCTCAGAGCAGTaGTGGGTGCCCAGTGCACAC +
Preference number: 5 (lower is better)
Translates to: AKSHLGVAQLPTAQASPGSASEQ*WVPSAH
Trigger: GTGTGCACTGGGCACCCACAACTGCTCTGAGGCTGA...TCCAGGTGATGCCTGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 90 bp GTTGGGAGATACCTGGGCAGACTCAGACCTCGGTGCAGACTCTCGTaGAGTGTCCAACTGTGGGGCACCTCTATCTGGGCGGCAGGTACG +
Preference number: 5 (lower is better)
Translates to: VGRYLGRLRPRCRLS*SVQLWGTSIWAAGT
Trigger: CGTACCTGCCGCCCAGATAGAGGTGCCCCACAGTTGGACACTGCACGAGAGTCTGCACCGAGGTCTGAGTCTGCCCAGGTATCTCCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 90 bp ATAGCCTGGCTCACAGGTGAGCGCCTTGTAGCATTGGAAGGAACCTaGCGTGTTCACACAGTGCTCGGCCCGGGTGCACGTGTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: IAWLTGERLVALEGT*RVHTVLGPGARVQV
Trigger: GACCTGCACACGTGCACCCGGGCCGAGCACTGTGTGAACACGCCAGGTTCCTTCCAATGCTACAAGGCGCTCACCTGTGAGCCAGGCTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp TTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAACGGGACGGCCATGCTaGGGCTCGGAGTCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: LQSHSKKPLRSGAAAHRPTGRPC*GSESEL
Trigger: CAGCTCTGACTCCGAGCCCAAGCATGGCCGTCCCGT...TGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp TTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCACAGGTCTCACCCTCCTaGGCTCCCATGACCCCAGCC +
Preference number: 5 (lower is better)
Translates to: LQSHSKKPLRSGAAAHRPQVSPS*APMTPA
Trigger: GGCTGGGGTCATGGGAGCCAAGGAGGGTGAGACCTG...TGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS TCA 90 bp GGGAAGCAGGAGCACATAGCTGTGTCCCCAACAACACGACACACCTaGCGGCAGGGCCCATTGTCTTTGCAGGTGTTGGGCTGTGGCACC +
Preference number: 5 (lower is better)
Translates to: GKQEHIAVSPTTRHT*RQGPLSLQVLGCGT
Trigger: GGTGCCACAGCCCAACACCTGCAAAGACAATGGGCCCTGCCGTCAGGTGTGTCGTGTTGTTGGGGACACAGCTATGTGCTCCTGCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 90 bp CATCCTGGTCATCTCCCGGCAGGCTATTGGGCAGTTCAGCCTCTGTaGCCAGTGACAGGGCCTCCCGGCTTGCCATCTCCATCTCTGAAA +
Preference number: 5 (lower is better)
Translates to: HPGHLPAGYWAVQPL*PVTGPPGLPSPSLK
Trigger: TTTCAGAGATGGAGATGGCAAGCCGGGAGGCCCTGTCACTGGGCACAGAGGCTGAACTGCCCAATAGCCTGCCGGGAGATGACCAGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 90 bp GCGCCGAGTCTCGCACTCGTTCACATCTTCACAATGTTTGCCATCTaGGGCCAAAAGGAAGCCAGCAGCGCAGGAGCAGCGGTAGGAGCC +
Preference number: 5 (lower is better)
Translates to: APSLALVHIFTMFAI*GQKEASSAGAAVGA
Trigger: GGCTCCTACCGCTGCTCCTGCGCTGCTGGCTTCCTTTTGGCCGCAGATGGCAAACATTGTGAAGATGTGAACGAGTGCGAGACTCGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 90 bp CTCAGGGCACAGCATGAACTGGCAGCTGATCTTGCCACCACCGGGTaGGCAGGAGCACTCGGTGCTGCCAAAGTCCACAAAGTAGGACTG +
Preference number: 5 (lower is better)
Translates to: LRAQHELAADLATTG*AGALGAAKVHKVGL
Trigger: CAGTCCTACTTTGTGGACTTTGGCAGCACCGAGTGCTCCTGCCCACCCGGTGGTGGCAAGATCAGCTGCCAGTTCATGCTGTGCCCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 90 bp CAAAGATGCTGGCAAAGCTCCCCAGGGAGCATCAGGCACTCATCCTaGTCATCTCCCGGCAGGCTATTGGGCAGTTCAGCCTCTGTGCCC +
Preference number: 5 (lower is better)
Translates to: QRCWQSSPGSIRHSS*SSPGRLLGSSASVP
Trigger: GGGCACAGAGGCTGAACTGCCCAATAGCCTGCCGGGAGATGACCAGGATGAGTGCCTGATGCTCCCTGGGGAGCTTTGCCAGCATCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 90 bp TGTCTTTGCAGGTGTTGGGCTGTGGCACCGGCAGTGGGATGGTGTTaGGAGATACCTGGGCAGACTCAGACCTCGGTGCAGACTCTCGTG +
Preference number: 5 (lower is better)
Translates to: CLCRCWAVAPAVGWC*EIPGQTQTSVQTLV
Trigger: CACGAGAGTCTGCACCGAGGTCTGAGTCTGCCCAGGTATCTCCCAACACCATCCCACTGCCGGTGCCACAGCCCAACACCTGCAAAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 90 bp GCCCATTGTCTTTGCAGGTGTTGGGCTGTGGCACCGGCAGTGGGATaGTGTTGGGAGATACCTGGGCAGACTCAGACCTCGGTGCAGACT +
Preference number: 5 (lower is better)
Translates to: AHCLCRCWAVAPAVG*CWEIPGQTQTSVQT
Trigger: AGTCTGCACCGAGGTCTGAGTCTGCCCAGGTATCTCCCAACACCATCCCACTGCCGGTGCCACAGCCCAACACCTGCAAAGACAATGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp TTCCAGTTTGCAGGTCACCATCTAGCCTCGGGTGACCCTGGCCTGTACTCAGTGAACTGGCAGCTGATCTaGCCACCACCGGGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: FQFAGHHLASGDPGLYSVNWQLI*PPPGGQ
Trigger: CTGCCCACCCGGTGGTGGCAAGATCAGCTGCCAGTT...CACTGAGTACAGGCCAGGGTCACCCGAGGCTAGATGGTGACCTGCAAACTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp GACCAGGCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAGGCAGTGGGATGGTGTaGGGAGATACCTGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: DQAGLELRDLPTSASPVLGSGMV*GDTWAD
Trigger: GTCTGCCCAGGTATCTCCCAACACCATCCCACTGCC...TAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGCCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS TCA 90 bp CAGCATCCGAGAAGTTCCCATGGCAACCAGGAAGCTGGTAGCAAATaGGCTCACCACCAGCGTCAGGACAGTGGCAAGCCCGGCAGGATG +
Preference number: 5 (lower is better)
Translates to: QHPRSSHGNQEAGSK*AHHQRQDSGKPGRM
Trigger: CATCCTGCCGGGCTTGCCACTGTCCTGACGCTGGTGGTGAGCTCATTTGCTACCAGCTTCCTGGTTGCCATGGGAACTTCTCGGATGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS TCA 90 bp TATACCCTTGCTCTGGGCATGCACACTGGTAGCTCCCAGGCACGTTaGCACAGCGGAAGGTACAGAGAATGCCCGCGCCCTGTGCACACT +
Preference number: 5 (lower is better)
Translates to: YTLALGMHTGSSQAR*HSGRYRECPRPVHT
Trigger: AGTGTGCACAGGGCGCGGGCATTCTCTGTACCTTCCGCTGTGTCAACGTGCCTGGGAGCTACCAGTGTGCATGCCCAGAGCAAGGGTATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 90 bp GCAGCATACTTACGGCCACTGTGGACACAGCCCACCTGGCCACACTaGGGGCAGCTGTCGGCTACTACTACAGCTTCAATGCAGTTGGGT +
Preference number: 5 (lower is better)
Translates to: AAYLRPLWTQPTWPH*GQLSATTTASMQLG
Trigger: ACCCAACTGCATTGAAGCTGTAGTAGTAGCCGACAGCTGCCCGCAGTGTGGCCAGGTGGGCTGTGTCCACAGTGGCCGTAAGTATGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 90 bp CCATTCTCGGGGATCTCCTGGCACTCATCATTGTCGATGGCCCACTaGTGGCCCGCTGCACAACAGGTCTCGATTAGGTCCTTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: PFSGISWHSSLSMAH*WPAAQQVSIRSLVE
Trigger: CTCCACCAAGGACCTAATCGAGACCTGTTGTGCAGCGGGCCAGCAGTGGGCCATCGACAATGATGAGTGCCAGGAGATCCCCGAGAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 90 bp GTATGGCCAGCAGCATACTTACGGCCACTGTGGACACAGCCCACCTaGCCACACTGCGGGCAGCTGTCGGCTACTACTACAGCTTCAATG +
Preference number: 5 (lower is better)
Translates to: VWPAAYLRPLWTQPT*PHCGQLSATTTASM
Trigger: CATTGAAGCTGTAGTAGTAGCCGACAGCTGCCCGCAGTGTGGCCAGGTGGGCTGTGTCCACAGTGGCCGTAAGTATGCTGCTGGCCATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 90 bp TTCTCGGGGATCTCCTGGCACTCATCATTGTCGATGGCCCACTGCTaGCCCGCTGCACAACAGGTCTCGATTAGGTCCTTGGTGGAGCCA +
Preference number: 5 (lower is better)
Translates to: FSGISWHSSLSMAHC*PAAQQVSIRSLVEP
Trigger: TGGCTCCACCAAGGACCTAATCGAGACCTGTTGTGCAGCGGGCCAGCAGTGGGCCATCGACAATGATGAGTGCCAGGAGATCCCCGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 90 bp TCTGGGCACCATTCTCGGGGATCTCCTGGCACTCATCATTGTCGATaGCCCACTGCTGGCCCGCTGCACAACAGGTCTCGATTAGGTCCT +
Preference number: 5 (lower is better)
Translates to: SGHHSRGSPGTHHCR*PTAGPLHNRSRLGP
Trigger: AGGACCTAATCGAGACCTGTTGTGCAGCGGGCCAGCAGTGGGCCATCGACAATGATGAGTGCCAGGAGATCCCCGAGAATGGTGCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp TGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTAGCCGTCTGGCTGGGGATCTaGTGGGCAGGCTGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: WSSEAPYGCFQFAGHHLAVWLGI*WAGCPA
Trigger: GGCTGGACAGCCTGCCCACAAGATCCCCAGCCAGAC...GGCTAGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp GACCAGGCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAACGCCGCAGGTATCATaGTCCTCTGCTCCACAGGTC +
Preference number: 5 (lower is better)
Translates to: DQAGLELRDLPTSASPVLTPQVS*SSAPQV
Trigger: GACCTGTGGAGCAGAGGACAATGATACCTGCGGCGT...TAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGCCTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp TTCCAGTTTGCAGGTCACCATCTAGCCTCGGGTGACCCTGGCCTGTACTCAGTGTCTCCCGGCAGGCTATaGGGCAGTTCAGCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: FQFAGHHLASGDPGLYSVSPGRL*GSSASV
Trigger: CACAGAGGCTGAACTGCCCAATAGCCTGCCGGGAGA...CACTGAGTACAGGCCAGGGTCACCCGAGGCTAGATGGTGACCTGCAAACTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp TTCCAGTTTGCAGGTCACCATCTAGCCTCGGGTGACCCTGGCCTGTACTCAGTGGGCAGTGGGATGGTGTaGGGAGATACCTGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: FQFAGHHLASGDPGLYSVGSGMV*GDTWAD
Trigger: GTCTGCCCAGGTATCTCCCAACACCATCCCACTGCC...CACTGAGTACAGGCCAGGGTCACCCGAGGCTAGATGGTGACCTGCAAACTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp GACCAGGCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTATTGTCTTTGCAGGTGTaGGGCTGTGGCACCGGCAGT +
Preference number: 5 (lower is better)
Translates to: DQAGLELRDLPTSASPVLLSLQV*GCGTGS
Trigger: ACTGCCGGTGCCACAGCCCAACACCTGCAAAGACAA...TAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGCCTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp CCTGCTGGGGTGCATCTCCCTCCCTCTAGGGTAGAGACTCAAGACCAACCAGCTTTGTCTTTGCAGGTGTaGGGCTGTGGCACCGGCAGT +
Preference number: 5 (lower is better)
Translates to: PAGVHLPPSRVETQDQPALSLQV*GCGTGS
Trigger: ACTGCCGGTGCCACAGCCCAACACCTGCAAAGACAA...AGCTGGTTGGTCTTGAGTCTCTACCCTAGAGGGAGGGAGATGCACCCCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp GCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAGGATTAGCCATCCATGCAGCGTaGCCGGGCCTGGCAGTAGAA +
Preference number: 5 (lower is better)
Translates to: AGLELRDLPTSASPVLGLAIHAA*PGLAVE
Trigger: TTCTACTGCCAGGCCCGGCAACGCTGCATGGATGGC...TAATCCTAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp GCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAGGATTACACTCATCCAGGTCCTaGCAGGACCTCCCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: AGLELRDLPTSASPVLGLHSSRS*QDLPLA
Trigger: GGCCAACGGGAGGTCCTGCAAGGACCTGGATGAGTG...TAATCCTAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 90 bp CTGAGAGCAGCCAGGCCTGACCTTGGCAGAGGTGCAGCACCCTCCTaGATGACACTTCGAGGAGTGACCTGGGCATCAGGAATAAGGTTT +
Preference number: 5 (lower is better)
Translates to: LRAARPDLGRGAAPS*MTLRGVTWASGIRF
Trigger: AAACCTTATTCCTGATGCCCAGGTCACTCCTCGAAGTGTCATGCAGGAGGGTGCTGCACCTCTGCCAAGGTCAGGCCTGGCTGCTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 90 bp GCAGGACCTCCCGTTGGCCATCATTGTATACCCTTGCTCTGGGCATaGACACTGGTAGCTCCCAGGCACGTTGACACAGCGGAAGGTACA +
Preference number: 5 (lower is better)
Translates to: AGPPVGHHCIPLLWA*TLVAPRHVDTAEGT
Trigger: TGTACCTTCCGCTGTGTCAACGTGCCTGGGAGCTACCAGTGTGCATGCCCAGAGCAAGGGTATACAATGATGGCCAACGGGAGGTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 90 bp GGAGCACTCGGTGCTGCCAAAGTCCACAAAGTAGGACTGGCCGGCTaGTACACGGCCATCCACAAACCCTCCTTGTACGCAGTCGTAGTA +
Preference number: 5 (lower is better)
Translates to: GALGAAKVHKVGLAG*YTAIHKPSLYAVVV
Trigger: TACTACGACTGCGTACAAGGAGGGTTTGTGGATGGCCGTGTACCAGCCGGCCAGTCCTACTTTGTGGACTTTGGCAGCACCGAGTGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 90 bp ATAAGGTTTTCCTCAGGCCCTGCCTTAGCTTCAGCCTCCTTCTCCTaGACAGGGAAACCAGGTCTGGCTGGGGATCTTGTGGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: IRFSSGPALASASFS*TGKPGLAGDLVGRL
Trigger: CAGCCTGCCCACAAGATCCCCAGCCAGACCTGGTTTCCCTGTCCAGGAGAAGGAGGCTGAAGCTAAGGCAGGGCCTGAGGAAAACCTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 90 bp GCTATCCTACAGATGTCACTCTGGGCACCATTCTCGGGGATCTCCTaGCACTCATCATTGTCGATGGCCCACTGCTGGCCCGCTGCACAA +
Preference number: 5 (lower is better)
Translates to: AILQMSLWAPFSGIS*HSSLSMAHCWPAAQ
Trigger: TTGTGCAGCGGGCCAGCAGTGGGCCATCGACAATGATGAGTGCCAGGAGATCCCCGAGAATGGTGCCCAGAGTGACATCTGTAGGATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 90 bp GTCCTTGCAGGACCTCCCGTTGGCCATCATTGTATACCCTTGCTCTaGGCATGCACACTGGTAGCTCCCAGGCACGTTGACACAGCGGAA +
Preference number: 5 (lower is better)
Translates to: VLAGPPVGHHCIPLL*ACTLVAPRHVDTAE
Trigger: TTCCGCTGTGTCAACGTGCCTGGGAGCTACCAGTGTGCATGCCCAGAGCAAGGGTATACAATGATGGCCAACGGGAGGTCCTGCAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp GCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGGCATCACCTGGAAACGATGTGCATTCGTaGATGTCCACACAGTTGCCC +
Preference number: 5 (lower is better)
Translates to: AKSHLGVAQLPTAQASPGNDVHS*MSTQLP
Trigger: GGGCAACTGTGTGGACATCAACGAATGCACATCGTT...TCCAGGTGATGCCTGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 90 bp ACCTGCCTGGACCTCGTTCACAATGGCCGTAGTAGCTTCTGCCTCTaGCACCTCCTGGTCATAGCTGTAGGGGTCTTCATACTGCCTCTC +
Preference number: 5 (lower is better)
Translates to: TCLDLVHNGRSSFCL*HLLVIAVGVFILPL
Trigger: GAGAGGCAGTATGAAGACCCCTACAGCTATGACCAGGAGGTGGCAGAGGCAGAAGCTACTACGGCCATTGTGAACGAGGTCCAGGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 90 bp CTCTGCACCTGCCTGGACCTCGTTCACAATGGCCGTAGTAGCTTCTaGCTCTGCCACCTCCTGGTCATAGCTGTAGGGGTCTTCATACTG +
Preference number: 5 (lower is better)
Translates to: LCTCLDLVHNGRSSF*LCHLLVIAVGVFIL
Trigger: CAGTATGAAGACCCCTACAGCTATGACCAGGAGGTGGCAGAGGCAGAAGCTACTACGGCCATTGTGAACGAGGTCCAGGCAGGTGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 90 bp AAGGAACCTGGCGTGTTCACACAGTGCTCGGCCCGGGTGCACGTGTaGAGGTCTGTCACACACTCATTGATGTCTTCACAGGACACACCA +
Preference number: 5 (lower is better)
Translates to: KEPGVFTQCSARVHV*RSVTHSLMSSQDTP
Trigger: TGGTGTGTCCTGTGAAGACATCAATGAGTGTGTGACAGACCTGCACACGTGCACCCGGGCCGAGCACTGTGTGAACACGCCAGGTTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113498.9
CDS CCA 90 bp CCCACTGCTGGCCCGCTGCACAACAGGTCTCGATTAGGTCCTTGGTaGAGCCATCAAGATCACCTCTGGGGACAGAATGTACTGAGTTGG +
Preference number: 5 (lower is better)
Translates to: PTAGPLHNRSRLGPW*SHQDHLWGQNVLSW
Trigger: CCAACTCAGTACATTCTGTCCCCAGAGGTGATCTTGATGGCTCCACCAAGGACCTAATCGAGACCTGTTGTGCAGCGGGCCAGCAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 90 bp TGGCCCACTGCTGGCCCGCTGCACAACAGGTCTCGATTAGGTCCTTaGTGGAGCCATCAAGATCACCTCTGGGGACAGAATGTACTGAGT +
Preference number: 5 (lower is better)
Translates to: WPTAGPLHNRSRLGP*WSHQDHLWGQNVLS
Trigger: ACTCAGTACATTCTGTCCCCAGAGGTGATCTTGATGGCTCCACCAAGGACCTAATCGAGACCTGTTGTGCAGCGGGCCAGCAGTGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp GTTAAGTTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACGTCACTCTCCTGGCTTaGGCCTGCACAGGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: VKLQSHSKKPLRSGAAAHVTLLA*ACTGAG
Trigger: CCCAGCACCTGTGCAGGCCAAAGCCAGGAGAGTGAC...GTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAACTTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp GTAGCCATAGTTGAGGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTCAGCCAGGCCTGACCTaGGCAGAGGTGCAGCACCCT +
Preference number: 5 (lower is better)
Translates to: VAIVEEWSSEAPYGCFQFQPGLT*AEVQHP
Trigger: AGGGTGCTGCACCTCTGCCAAGGTCAGGCCTGGCTG...AAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCCTCAACTATGGCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp CCTGCTGGGGTGCATCTCCCTCCCTCTAGGGTAGAGACTCAAGACCAACCAGCTGTAGGAGATGCAGCATaGCCTCTGGGCTATCCTACA +
Preference number: 5 (lower is better)
Translates to: PAGVHLPPSRVETQDQPAVGDAA*PLGYPT
Trigger: TGTAGGATAGCCCAGAGGCAATGCTGCATCTCCTAC...AGCTGGTTGGTCTTGAGTCTCTACCCTAGAGGGAGGGAGATGCACCCCAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp GCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAGGATTAACGCCGCAGGTATCATaGTCCTCTGCTCCACAGGTC +
Preference number: 5 (lower is better)
Translates to: AGLELRDLPTSASPVLGLTPQVS*SSAPQV
Trigger: GACCTGTGGAGCAGAGGACAATGATACCTGCGGCGT...TAATCCTAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp GTTAAGTTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCACTCATCCAGGTCCTaGCAGGACCTCCCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: VKLQSHSKKPLRSGAAAHHSSRS*QDLPLA
Trigger: GGCCAACGGGAGGTCCTGCAAGGACCTGGATGAGTG...GTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAACTTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp TGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTAGCCTCAGCCTCAGAGCAGTaGTGGGTGCCCAGTGCACAC +
Preference number: 5 (lower is better)
Translates to: WSSEAPYGCFQFAGHHLASASEQ*WVPSAH
Trigger: GTGTGCACTGGGCACCCACAACTGCTCTGAGGCTGA...GGCTAGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp CCTGCTGGGGTGCATCTCCCTCCCTCTAGGGTAGAGACTCAAGACCAACCAGCTAAACTCCCCTGGATATaGTGGCAGGTCTCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: PAGVHLPPSRVETQDQPAKLPWI*WQVSAS
Trigger: TGAGGCTGAGACCTGCCACAATATCCAGGGGAGTTT...AGCTGGTTGGTCTTGAGTCTCTACCCTAGAGGGAGGGAGATGCACCCCAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp GACCAGGCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAAAACTCCCCTGGATATaGTGGCAGGTCTCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: DQAGLELRDLPTSASPVLKLPWI*WQVSAS
Trigger: TGAGGCTGAGACCTGCCACAATATCCAGGGGAGTTT...TAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGCCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 90 bp TCTATGTCTTCTTCTGCCCGGAATCGAGGTAGCAACTGTGGATGCTaGGGTATTTCTTCAGGTGTCTCTGGGGAGGGGGAGACCTGGGCT +
Preference number: 5 (lower is better)
Translates to: SMSSSARNRGSNCGC*GISSGVSGEGETWA
Trigger: AGCCCAGGTCTCCCCCTCCCCAGAGACACCTGAAGAAATACCCCAGCATCCACAGTTGCTACCTCGATTCCGGGCAGAAGAAGACATAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 90 bp GGCATGTGGTGCGCTCGCACTTCGTTTCTGAGACACGGACATAGTTaGGTGGACAATCAAAGCGCAGGCAGCGGAAACTCCCCTGGATAT +
Preference number: 5 (lower is better)
Translates to: GMWCARTSFLRHGHS*VDNQSAGSGNSPGY
Trigger: ATATCCAGGGGAGTTTCCGCTGCCTGCGCTTTGATTGTCCACCCAACTATGTCCGTGTCTCAGAAACGAAGTGCGAGCGCACCACATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 90 bp GTGAAGAAGATGTACATCTTGGCCAGGAAGGTAGTGACAGAGCCCTaGCGCCAAAGCTTCATCTCCACATCTAGGGCAAAGTCCCGCGGC +
Preference number: 5 (lower is better)
Translates to: VKKMYILARKVVTEP*RQSFISTSRAKSRG
Trigger: GCCGCGGGACTTTGCCCTAGATGTGGAGATGAAGCTTTGGCGCCAGGGCTCTGTCACTACCTTCCTGGCCAAGATGTACATCTTCTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp GCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCAGGCATCACCTGGATCTGTCACACACTCATaGATGTCCACACACTTCCTA +
Preference number: 5 (lower is better)
Translates to: AKSHLGVAQLPTAQASPGSVTHS*MSTHFL
Trigger: TAGGAAGTGTGTGGACATCAATGAGTGTGTGACAGA...TCCAGGTGATGCCTGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041544.8
CDS-3UTR CAA 90 bp CCTGCTGGGGTGCATCTCCCTCCCTCTAGGGTAGAGACTCAAGACCAACCAGCTCATCATTGTATACCCTaGCTCTGGGCATGCACACTG +
Preference number: 5 (lower is better)
Translates to: PAGVHLPPSRVETQDQPAHHCIP*LWACTL
Trigger: CAGTGTGCATGCCCAGAGCAAGGGTATACAATGATG...AGCTGGTTGGTCTTGAGTCTCTACCCTAGAGGGAGGGAGATGCACCCCAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp TTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCGCCCATTGCAGGACCTCCCGTaGGCCATCATTGTATACCCT +
Preference number: 5 (lower is better)
Translates to: LQSHSKKPLRSGAAAHRPLQDLP*AIIVYP
Trigger: AGGGTATACAATGATGGCCAACGGGAGGTCCTGCAA...TGGGCGGTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 90 bp AGTGCCCATCAAACACTCGTCTTGGTCTTCACAGGACACACCATCTaGCATGATGGCGTAGCCAGGGAAGCAGGAGCACATAGCTGTGTC +
Preference number: 5 (lower is better)
Translates to: SAHQTLVLVFTGHTI*HDGVAREAGAHSCV
Trigger: GACACAGCTATGTGCTCCTGCTTCCCTGGCTACGCCATCATGGCAGATGGTGTGTCCTGTGAAGACCAAGACGAGTGTTTGATGGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041544.8
CDS CCA 90 bp ACATTCGTCCACGTCTGTGCATTCACCATCTGTGAGGACATAGCCTaGCTCACAGGTGAGCGCCTTGTAGCATTGGAAGGAACCTGGCGT +
Preference number: 5 (lower is better)
Translates to: TFVHVCAFTICEDIA*LTGERLVALEGTWR
Trigger: ACGCCAGGTTCCTTCCAATGCTACAAGGCGCTCACCTGTGAGCCAGGCTATGTCCTCACAGATGGTGAATGCACAGACGTGGACGAATGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp CCTGCTGGGGTGCATCTCCCTCCCTCTAGGGTAGAGACTCAAGACCAACCAGCTACATCTTCACAATGTTaGCCATCTGCGGCCAAAAGG +
Preference number: 5 (lower is better)
Translates to: PAGVHLPPSRVETQDQPATSSQC*PSAAKR
Trigger: CCTTTTGGCCGCAGATGGCAAACATTGTGAAGATGT...AGCTGGTTGGTCTTGAGTCTCTACCCTAGAGGGAGGGAGATGCACCCCAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 90 bp GGCAGTAGCACTGATAGGAGCCATAGATGTTGGCACATTCCTGGCTaGAGCGCCGAGTCTCGCACTCGTTCACATCTTCACAATGTTTGC +
Preference number: 5 (lower is better)
Translates to: GSSTDRSHRCWHIPG*SAESRTRSHLHNVC
Trigger: GCAAACATTGTGAAGATGTGAACGAGTGCGAGACTCGGCGCTGCAGCCAGGAATGTGCCAACATCTATGGCTCCTATCAGTGCTACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp GGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTGTAGGAGATGCAGCATaGCCTCTGGGCTATCCTACA +
Preference number: 5 (lower is better)
Translates to: GVEFRSPLWLFPVCRSPSVGDAA*PLGYPT
Trigger: TGTAGGATAGCCCAGAGGCAATGCTGCATCTCCTAC...AGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp GCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAGGATTAAACGATGTGCATTCGTaGATGTCCACACAGTTGCCC +
Preference number: 5 (lower is better)
Translates to: AGLELRDLPTSASPVLGLNDVHS*MSTQLP
Trigger: GGGCAACTGTGTGGACATCAACGAATGCACATCGTT...TAATCCTAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp GGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTTTGCAGGACCTCCCGTaGGCCATCATTGTATACCCT +
Preference number: 5 (lower is better)
Translates to: GVEFRSPLWLFPVCRSPSLQDLP*AIIVYP
Trigger: AGGGTATACAATGATGGCCAACGGGAGGTCCTGCAA...AGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp GACCAGGCTGGCCTGGAACTCAGAGATCTACCTACCTCTGCCTCCCCAGTGCTAAAGAAGATGTACATCTaGGCCAGGAAGGTAGTGACA +
Preference number: 5 (lower is better)
Translates to: DQAGLELRDLPTSASPVLKKMYI*ARKVVT
Trigger: TGTCACTACCTTCCTGGCCAAGATGTACATCTTCTT...TAGCACTGGGGAGGCAGAGGTAGGTAGATCTCTGAGTTCCAGGCCAGCCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp CCTGCTGGGGTGCATCTCCCTCCCTCTAGGGTAGAGACTCAAGACCAACCAGCTTCTGTCACACACTCATaGATGTCTTCACAGGACACA +
Preference number: 5 (lower is better)
Translates to: PAGVHLPPSRVETQDQPASVTHS*MSSQDT
Trigger: TGTGTCCTGTGAAGACATCAATGAGTGTGTGACAGA...AGCTGGTTGGTCTTGAGTCTCTACCCTAGAGGGAGGGAGATGCACCCCAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp CCTGCTGGGGTGCATCTCCCTCCCTCTAGGGTAGAGACTCAAGACCAACCAGCTACAGAATGTACTGAGTaGGGGTCTATGTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: PAGVHLPPSRVETQDQPATECTE*GSMSSS
Trigger: AGAAGAAGACATAGACCCCAACTCAGTACATTCTGT...AGCTGGTTGGTCTTGAGTCTCTACCCTAGAGGGAGGGAGATGCACCCCAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp GTAGCCATAGTTGAGGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTTCCCGTTGGCCATCATaGTATACCCTTGCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: VAIVEEWSSEAPYGCFQFSRWPS*YTLALG
Trigger: GCCCAGAGCAAGGGTATACAATGATGGCCAACGGGA...AAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCCTCAACTATGGCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp TTCCAGTTTGCAGGTCACCATCTAGCCTCGGGTGACCCTGGCCTGTACTCAGTGACAGAATGTACTGAGTaGGGGTCTATGTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: FQFAGHHLASGDPGLYSVTECTE*GSMSSS
Trigger: AGAAGAAGACATAGACCCCAACTCAGTACATTCTGT...CACTGAGTACAGGCCAGGGTCACCCGAGGCTAGATGGTGACCTGCAAACTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp GGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTACATCTTCACAATGTTaGCCATCTGCGGCCAAAAGG +
Preference number: 5 (lower is better)
Translates to: GVEFRSPLWLFPVCRSPSTSSQC*PSAAKR
Trigger: CCTTTTGGCCGCAGATGGCAAACATTGTGAAGATGT...AGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS-3UTR CAA 90 bp GTTAAGTTACAGAGTCACAGCAAAAAGCCACTTAGGAGTGGCGCAGCTGCCCACCATCATTGTATACCCTaGCTCTGGGCATGCACACTG +
Preference number: 5 (lower is better)
Translates to: VKLQSHSKKPLRSGAAAHHHCIP*LWACTL
Trigger: CAGTGTGCATGCCCAGAGCAAGGGTATACAATGATG...GTGGGCAGCTGCGCCACTCCTAAGTGGCTTTTTGCTGTGACTCTGTAACTTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS TCA 90 bp AAGGATCCCAGGGTGTTCACACAGAACTGTTTCCAGCTACAATCGTaGGTGCCCATCAAACACTCGTCTTGGTCTTCACAGGACACACCA +
Preference number: 5 (lower is better)
Translates to: KDPRVFTQNCFQLQS*VPIKHSSWSSQDTP
Trigger: TGGTGTGTCCTGTGAAGACCAAGACGAGTGTTTGATGGGCACTCACGATTGTAGCTGGAAACAGTTCTGTGTGAACACCCTGGGATCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041544.8
CDS GCA 90 bp ATTGATGTCCACACACTTCCTATGTGCGTTGAGGATATAGCCCTCTaGACACAGCACTGTGTGGTTGACACAGTAGAAGGATCCCAGGGT +
Preference number: 5 (lower is better)
Translates to: IDVHTLPMCVEDIAL*TQHCVVDTVEGSQG
Trigger: ACCCTGGGATCCTTCTACTGTGTCAACCACACAGTGCTGTGTGCAGAGGGCTATATCCTCAACGCACATAGGAAGTGTGTGGACATCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041544.8
CDS-3UTR CAA 90 bp GGAGTGGAGTTCAGAAGCCCCCTATGGCTGTTTCCAGTTTGCAGGTCACCATCTAAGAAGATGTACATCTaGGCCAGGAAGGTAGTGACA +
Preference number: 5 (lower is better)
Translates to: GVEFRSPLWLFPVCRSPSKKMYI*ARKVVT
Trigger: TGTCACTACCTTCCTGGCCAAGATGTACATCTTCTT...AGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTGAACTCCACTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 72 bp GGGCCTCCCGGCTTGCCATCTCCATCTCTGAAACTCTaGGAGGAGCAGCCTCGGGCTCTGGTGGCCGGCGGA +
Preference number: 6 (lower is better)
Translates to: GPPGLPSPSLKL*EEQPRALVAGG
Trigger: TCCGCCGGCCACCAGAGCCCGAGGCTGCTCCTCGCAGAGTTTCAGAGATGGAGATGGCAAGCCGGGAGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 72 bp CGATGCAGTTCTCCAGCAGGGGACACTCAGCACCTGTaGAATCCTGCCACGGGACGGCCATGCTTGGGCTCG +
Preference number: 6 (lower is better)
Translates to: RCSSPAGDTQHL*NPATGRPCLGS
Trigger: CGAGCCCAAGCATGGCCGTCCCGTGGCAGGATTGCACAGGTGCTGAGTGTCCCCTGCTGGAGAACTGCATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
ENSMUST00000132021.2
ENSMUST00000134974.2
CDS GCA 72 bp CATCTCCCGGCAGGCTATTGGGCAGTTCAGCCTCTGTaGCCAGTGACAGGGCCTCCCGGCTTGCCATCTCCA +
Preference number: 6 (lower is better)
Translates to: HLPAGYWAVQPL*PVTGPPGLPSP
Trigger: TGGAGATGGCAAGCCGGGAGGCCCTGTCACTGGGCACAGAGGCTGAACTGCCCAATAGCCTGCCGGGAGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 72 bp CACAGTTGCCCTCGGGGTCCTGCAAGAAGCCATCCATaGAGCGTTGCCGGGCCTGGCAGTAGAAGGAGCCCT +
Preference number: 6 (lower is better)
Translates to: HSCPRGPARSHP*SVAGPGSRRSP
Trigger: AGGGCTCCTTCTACTGCCAGGCCCGGCAACGCTGCATGGATGGCTTCTTGCAGGACCCCGAGGGCAACTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 72 bp TGGACGGTATGGCCAGCAGCATACTTACGGCCACTGTaGACACAGCCCACCTGGCCACACTGCGGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: WTVWPAAYLRPL*TQPTWPHCGQL
Trigger: CAGCTGCCCGCAGTGTGGCCAGGTGGGCTGTGTCCACAGTGGCCGTAAGTATGCTGCTGGCCATACCGTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 72 bp CCTGGACAGGGAAACCAGGTCTGGCTGGGGATCTTGTaGGCAGGCTGTCCAGCCTTCCAGGACTGCCTGCTG +
Preference number: 6 (lower is better)
Translates to: PGQGNQVWLGIL*AGCPAFQDCLL
Trigger: CAGCAGGCAGTCCTGGAAGGCTGGACAGCCTGCCCACAAGATCCCCAGCCAGACCTGGTTTCCCTGTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CAA 72 bp GGTAGCTCAGGGCACAGCATGAACTGGCAGCTGATCTaGCCACCACCGGGTGGGCAGGAGCACTCGGTGCTG +
Preference number: 6 (lower is better)
Translates to: GSSGHSMNWQLI*PPPGGQEHSVL
Trigger: CAGCACCGAGTGCTCCTGCCCACCCGGTGGTGGCAAGATCAGCTGCCAGTTCATGCTGTGCCCTGAGCTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CAA 90 bp CCAGGGAGCATCAGGCACTCATCCTGGTCATCTCCCGGCAGGCTATaGGGCAGTTCAGCCTCTGTGCCCAGTGACAGGGCCTCCCGGCTT +
Preference number: 6 (lower is better)
Translates to: PGSIRHSSWSSPGRL*GSSASVPSDRASRL
Trigger: AAGCCGGGAGGCCCTGTCACTGGGCACAGAGGCTGAACTGCCCAATAGCCTGCCGGGAGATGACCAGGATGAGTGCCTGATGCTCCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CAA 90 bp CAGTTGGGTGGTAGCTCAGGGCACAGCATGAACTGGCAGCTGATCTaGCCACCACCGGGTGGGCAGGAGCACTCGGTGCTGCCAAAGTCC +
Preference number: 6 (lower is better)
Translates to: QLGGSSGHSMNWQLI*PPPGGQEHSVLPKS
Trigger: GGACTTTGGCAGCACCGAGTGCTCCTGCCCACCCGGTGGTGGCAAGATCAGCTGCCAGTTCATGCTGTGCCCTGAGCTACCACCCAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS TCA 72 bp GTCAGTGGCCAGAGATGGACTGAGAGCAGCCAGGCCTaGCCTTGGCAGAGGTGCAGCACCCTCCTGCATGAC +
Preference number: 6 (lower is better)
Translates to: VSGQRWTESSQA*PWQRCSTLLHD
Trigger: GTCATGCAGGAGGGTGCTGCACCTCTGCCAAGGTCAGGCCTGGCTGCTCTCAGTCCATCTCTGGCCACTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 72 bp TCTTGCCACCACCGGGTGGGCAGGAGCACTCGGTGCTaGCAAAGTCCACAAAGTAGGACTGGCCGGCTGGTA +
Preference number: 6 (lower is better)
Translates to: SCHHRVGRSTRC*QSPQSRTGRLV
Trigger: TACCAGCCGGCCAGTCCTACTTTGTGGACTTTGGCAGCACCGAGTGCTCCTGCCCACCCGGTGGTGGCAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 72 bp AGCCTCCTTCTCCTGGACAGGGAAACCAGGTCTGGCTaGGGATCTTGTGGGCAGGCTGTCCAGCCTTCCAGG +
Preference number: 6 (lower is better)
Translates to: SLLLLDRETRSG*GSCGQAVQPSR
Trigger: CCTGGAAGGCTGGACAGCCTGCCCACAAGATCCCCAGCCAGACCTGGTTTCCCTGTCCAGGAGAAGGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 72 bp CTCTCGTGCAGTGTCCAACTGTGGGGCACCTCTATCTaGGCGGCAGGTACGGCCATCACCCTGCAGCTCGAA +
Preference number: 6 (lower is better)
Translates to: LSCSVQLWGTSI*AAGTAITLQLE
Trigger: TTCGAGCTGCAGGGTGATGGCCGTACCTGCCGCCCAGATAGAGGTGCCCCACAGTTGGACACTGCACGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 72 bp AGACCTCGGTGCAGACTCTCGTGCAGTGTCCAACTGTaGGGCACCTCTATCTGGGCGGCAGGTACGGCCATC +
Preference number: 6 (lower is better)
Translates to: RPRCRLSCSVQL*GTSIWAAGTAI
Trigger: GATGGCCGTACCTGCCGCCCAGATAGAGGTGCCCCACAGTTGGACACTGCACGAGAGTCTGCACCGAGGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 72 bp ACACCTGACGGCAGGGCCCATTGTCTTTGCAGGTGTTaGGCTGTGGCACCGGCAGTGGGATGGTGTTGGGAG +
Preference number: 6 (lower is better)
Translates to: TPDGRAHCLCRC*AVAPAVGWCWE
Trigger: CTCCCAACACCATCCCACTGCCGGTGCCACAGCCCAACACCTGCAAAGACAATGGGCCCTGCCGTCAGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CAA 90 bp TATTGGGCAGTTCAGCCTCTGTGCCCAGTGACAGGGCCTCCCGGCTaGCCATCTCCATCTCTGAAACTCTGCGAGGAGCAGCCTCGGGCT +
Preference number: 6 (lower is better)
Translates to: YWAVQPLCPVTGPPG*PSPSLKLCEEQPRA
Trigger: AGCCCGAGGCTGCTCCTCGCAGAGTTTCAGAGATGGAGATGGCAAGCCGGGAGGCCCTGTCACTGGGCACAGAGGCTGAACTGCCCAATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 72 bp CATTCGTTGATGTCCACACAGTTGCCCTCGGGGTCCTaGAAGAAGCCATCCATGCAGCGTTGCCGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: HSLMSTQLPSGS*KKPSMQRCRAW
Trigger: CCAGGCCCGGCAACGCTGCATGGATGGCTTCTTGCAGGACCCCGAGGGCAACTGTGTGGACATCAACGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 72 bp GCAGCATACTTACGGCCACTGTGGACACAGCCCACCTaGCCACACTGCGGGCAGCTGTCGGCTACTACTACA +
Preference number: 6 (lower is better)
Translates to: AAYLRPLWTQPT*PHCGQLSATTT
Trigger: TGTAGTAGTAGCCGACAGCTGCCCGCAGTGTGGCCAGGTGGGCTGTGTCCACAGTGGCCGTAAGTATGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 72 bp CTTCAGCCTCCTTCTCCTGGACAGGGAAACCAGGTCTaGCTGGGGATCTTGTGGGCAGGCTGTCCAGCCTTC +
Preference number: 6 (lower is better)
Translates to: LQPPSPGQGNQV*LGILWAGCPAF
Trigger: GAAGGCTGGACAGCCTGCCCACAAGATCCCCAGCCAGACCTGGTTTCCCTGTCCAGGAGAAGGAGGCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 72 bp CAACTGTGGATGCTGGGGTATTTCTTCAGGTGTCTCTaGGGAGGGGGAGACCTGGGCTCGGTCAGGTGGCAG +
Preference number: 6 (lower is better)
Translates to: QLWMLGYFFRCL*GGGDLGSVRWQ
Trigger: CTGCCACCTGACCGAGCCCAGGTCTCCCCCTCCCCAGAGACACCTGAAGAAATACCCCAGCATCCACAGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 72 bp TCAGGCACTCATCCTGGTCATCTCCCGGCAGGCTATTaGGCAGTTCAGCCTCTGTGCCCAGTGACAGGGCCT +
Preference number: 6 (lower is better)
Translates to: SGTHPGHLPAGY*AVQPLCPVTGP
Trigger: AGGCCCTGTCACTGGGCACAGAGGCTGAACTGCCCAATAGCCTGCCGGGAGATGACCAGGATGAGTGCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 72 bp CTCACAGGTGAGCGCCTTGTAGCATTGGAAGGAACCTaGCGTGTTCACACAGTGCTCGGCCCGGGTGCACGT +
Preference number: 6 (lower is better)
Translates to: LTGERLVALEGT*RVHTVLGPGAR
Trigger: ACGTGCACCCGGGCCGAGCACTGTGTGAACACGCCAGGTTCCTTCCAATGCTACAAGGCGCTCACCTGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CAA 72 bp CTGGCCGGCTGGTACACGGCCATCCACAAACCCTCCTaGTACGCAGTCGTAGTACTGGTAGCCTTCGCAGGC +
Preference number: 6 (lower is better)
Translates to: LAGWYTAIHKPS*YAVVVLVAFAG
Trigger: GCCTGCGAAGGCTACCAGTACTACGACTGCGTACAAGGAGGGTTTGTGGATGGCCGTGTACCAGCCGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CAA 72 bp TGGGCACCATTCTCGGGGATCTCCTGGCACTCATCATaGTCGATGGCCCACTGCTGGCCCGCTGCACAACAG +
Preference number: 6 (lower is better)
Translates to: WAPFSGISWHSS*SMAHCWPAAQQ
Trigger: CTGTTGTGCAGCGGGCCAGCAGTGGGCCATCGACAATGATGAGTGCCAGGAGATCCCCGAGAATGGTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CAA 72 bp ATCAGGCACTCATCCTGGTCATCTCCCGGCAGGCTATaGGGCAGTTCAGCCTCTGTGCCCAGTGACAGGGCC +
Preference number: 6 (lower is better)
Translates to: IRHSSWSSPGRL*GSSASVPSDRA
Trigger: GGCCCTGTCACTGGGCACAGAGGCTGAACTGCCCAATAGCCTGCCGGGAGATGACCAGGATGAGTGCCTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CAA 90 bp TGGCTGCAGCGCCGAGTCTCGCACTCGTTCACATCTTCACAATGTTaGCCATCTGCGGCCAAAAGGAAGCCAGCAGCGCAGGAGCAGCGG +
Preference number: 6 (lower is better)
Translates to: WLQRRVSHSFTSSQC*PSAAKRKPAAQEQR
Trigger: CCGCTGCTCCTGCGCTGCTGGCTTCCTTTTGGCCGCAGATGGCAAACATTGTGAAGATGTGAACGAGTGCGAGACTCGGCGCTGCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 72 bp TTACGGCCACTGTGGACACAGCCCACCTGGCCACACTaGGGGCAGCTGTCGGCTACTACTACAGCTTCAATG +
Preference number: 6 (lower is better)
Translates to: LRPLWTQPTWPH*GQLSATTTASM
Trigger: CATTGAAGCTGTAGTAGTAGCCGACAGCTGCCCGCAGTGTGGCCAGGTGGGCTGTGTCCACAGTGGCCGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 72 bp GGTATTTCTTCAGGTGTCTCTGGGGAGGGGGAGACCTaGGCTCGGTCAGGTGGCAGTGTAGATAGAGTGGGG +
Preference number: 6 (lower is better)
Translates to: GISSGVSGEGET*ARSGGSVDRVG
Trigger: CCCCACTCTATCTACACTGCCACCTGACCGAGCCCAGGTCTCCCCCTCCCCAGAGACACCTGAAGAAATACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 72 bp CATTCTCGGGGATCTCCTGGCACTCATCATTGTCGATaGCCCACTGCTGGCCCGCTGCACAACAGGTCTCGA +
Preference number: 6 (lower is better)
Translates to: HSRGSPGTHHCR*PTAGPLHNRSR
Trigger: TCGAGACCTGTTGTGCAGCGGGCCAGCAGTGGGCCATCGACAATGATGAGTGCCAGGAGATCCCCGAGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 72 bp CAGATGTCACTCTGGGCACCATTCTCGGGGATCTCCTaGCACTCATCATTGTCGATGGCCCACTGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: QMSLWAPFSGIS*HSSLSMAHCWP
Trigger: GGGCCAGCAGTGGGCCATCGACAATGATGAGTGCCAGGAGATCCCCGAGAATGGTGCCCAGAGTGACATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CAA 90 bp AAAGTAGGACTGGCCGGCTGGTACACGGCCATCCACAAACCCTCCTaGTACGCAGTCGTAGTACTGGTAGCCTTCGCAGGCACAGCCCTG +
Preference number: 6 (lower is better)
Translates to: KVGLAGWYTAIHKPS*YAVVVLVAFAGTAL
Trigger: CAGGGCTGTGCCTGCGAAGGCTACCAGTACTACGACTGCGTACAAGGAGGGTTTGTGGATGGCCGTGTACCAGCCGGCCAGTCCTACTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CAA 90 bp ATCTGTGAGGACATAGCCTGGCTCACAGGTGAGCGCCTTGTAGCATaGGAAGGAACCTGGCGTGTTCACACAGTGCTCGGCCCGGGTGCA +
Preference number: 6 (lower is better)
Translates to: ICEDIAWLTGERLVA*EGTWRVHTVLGPGA
Trigger: TGCACCCGGGCCGAGCACTGTGTGAACACGCCAGGTTCCTTCCAATGCTACAAGGCGCTCACCTGTGAGCCAGGCTATGTCCTCACAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CAA 90 bp CGGCAAGGCTCCAGTAACGATGTGCATTCGTTGATGTCCACACAGTaGCCCTCGGGGTCCTGCAAGAAGCCATCCATGCAGCGTTGCCGG +
Preference number: 6 (lower is better)
Translates to: RQGSSNDVHSLMSTQ*PSGSCKKPSMQRCR
Trigger: CCGGCAACGCTGCATGGATGGCTTCTTGCAGGACCCCGAGGGCAACTGTGTGGACATCAACGAATGCACATCGTTACTGGAGCCTTGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CAA 90 bp ATGTCACTCTGGGCACCATTCTCGGGGATCTCCTGGCACTCATCATaGTCGATGGCCCACTGCTGGCCCGCTGCACAACAGGTCTCGATT +
Preference number: 6 (lower is better)
Translates to: MSLWAPFSGISWHSS*SMAHCWPAAQQVSI
Trigger: AATCGAGACCTGTTGTGCAGCGGGCCAGCAGTGGGCCATCGACAATGATGAGTGCCAGGAGATCCCCGAGAATGGTGCCCAGAGTGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CAA 90 bp CAGCTGAACCCTGAGCGGCAAGGCTCCAGTAACGATGTGCATTCGTaGATGTCCACACAGTTGCCCTCGGGGTCCTGCAAGAAGCCATCC +
Preference number: 6 (lower is better)
Translates to: QLNPERQGSSNDVHS*MSTQLPSGSCKKPS
Trigger: GGATGGCTTCTTGCAGGACCCCGAGGGCAACTGTGTGGACATCAACGAATGCACATCGTTACTGGAGCCTTGCCGCTCAGGGTTCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CAA 90 bp GGGCTTGCAGTCACAGCGGTAGGATCCAGGGAGGTTATAGCACAGTaGGCCCTCGCCACAGCGATGCACACCTGTCTCACACTCATTCAC +
Preference number: 6 (lower is better)
Translates to: GLAVTAVGSREVIAQ*ALATAMHTCLTLIH
Trigger: GTGAATGAGTGTGAGACAGGTGTGCATCGCTGTGGCGAGGGCCAACTGTGCTATAACCTCCCTGGATCCTACCGCTGTGACTGCAAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CAA 90 bp GTGCACACTCATCCAGGTCCTTGCAGGACCTCCCGTTGGCCATCATaGTATACCCTTGCTCTGGGCATGCACACTGGTAGCTCCCAGGCA +
Preference number: 6 (lower is better)
Translates to: VHTHPGPCRTSRWPS*YTLALGMHTGSSQA
Trigger: TGCCTGGGAGCTACCAGTGTGCATGCCCAGAGCAAGGGTATACAATGATGGCCAACGGGAGGTCCTGCAAGGACCTGGATGAGTGTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 72 bp TGCCTGGACCTCGTTCACAATGGCCGTAGTAGCTTCTaGCTCTGCCACCTCCTGGTCATAGCTGTAGGGGTC +
Preference number: 6 (lower is better)
Translates to: CLDLVHNGRSSF*LCHLLVIAVGV
Trigger: GACCCCTACAGCTATGACCAGGAGGTGGCAGAGGCAGAAGCTACTACGGCCATTGTGAACGAGGTCCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 72 bp CCCGTTGGCCATCATTGTATACCCTTGCTCTGGGCATaGACACTGGTAGCTCCCAGGCACGTTGACACAGCG +
Preference number: 6 (lower is better)
Translates to: PVGHHCIPLLWA*TLVAPRHVDTA
Trigger: CGCTGTGTCAACGTGCCTGGGAGCTACCAGTGTGCATGCCCAGAGCAAGGGTATACAATGATGGCCAACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 72 bp GGCGTGTTCACACAGTGCTCGGCCCGGGTGCACGTGTaGAGGTCTGTCACACACTCATTGATGTCTTCACAG +
Preference number: 6 (lower is better)
Translates to: GVFTQCSARVHV*RSVTHSLMSSQ
Trigger: CTGTGAAGACATCAATGAGTGTGTGACAGACCTGCACACGTGCACCCGGGCCGAGCACTGTGTGAACACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113498.9
CDS CCA 72 bp GGTGCTGCCAAAGTCCACAAAGTAGGACTGGCCGGCTaGTACACGGCCATCCACAAACCCTCCTTGTACGCA +
Preference number: 6 (lower is better)
Translates to: GAAKVHKVGLAG*YTAIHKPSLYA
Trigger: TGCGTACAAGGAGGGTTTGTGGATGGCCGTGTACCAGCCGGCCAGTCCTACTTTGTGGACTTTGGCAGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 72 bp GCAGCACCCTCCTGCATGACACTTCGAGGAGTGACCTaGGCATCAGGAATAAGGTTTTCCTCAGGCCCTGCC +
Preference number: 6 (lower is better)
Translates to: AAPSCMTLRGVT*ASGIRFSSGPA
Trigger: GGCAGGGCCTGAGGAAAACCTTATTCCTGATGCCCAGGTCACTCCTCGAAGTGTCATGCAGGAGGGTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 72 bp AAGGAGCCCTTGGTGTTCTGGCATGAGAAGCCTGCCTaGCAGTTGTGTGTGCCCGTCACACATTCGTCCACG +
Preference number: 6 (lower is better)
Translates to: KEPLVFWHEKPA*QLCVPVTHSST
Trigger: CGTGGACGAATGTGTGACGGGCACACACAACTGCCAGGCAGGCTTCTCATGCCAGAACACCAAGGGCTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 72 bp GGACCTCCCGTTGGCCATCATTGTATACCCTTGCTCTaGGCATGCACACTGGTAGCTCCCAGGCACGTTGAC +
Preference number: 6 (lower is better)
Translates to: GPPVGHHCIPLL*ACTLVAPRHVD
Trigger: GTCAACGTGCCTGGGAGCTACCAGTGTGCATGCCCAGAGCAAGGGTATACAATGATGGCCAACGGGAGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CAA 72 bp GACATAGCCTGGCTCACAGGTGAGCGCCTTGTAGCATaGGAAGGAACCTGGCGTGTTCACACAGTGCTCGGC +
Preference number: 6 (lower is better)
Translates to: DIAWLTGERLVA*EGTWRVHTVLG
Trigger: GCCGAGCACTGTGTGAACACGCCAGGTTCCTTCCAATGCTACAAGGCGCTCACCTGTGAGCCAGGCTATGTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CAA 72 bp CCCTTGGTGTTCTGGCATGAGAAGCCTGCCTGGCAGTaGTGTGTGCCCGTCACACATTCGTCCACGTCTGTG +
Preference number: 6 (lower is better)
Translates to: PLVFWHEKPAWQ*CVPVTHSSTSV
Trigger: CACAGACGTGGACGAATGTGTGACGGGCACACACAACTGCCAGGCAGGCTTCTCATGCCAGAACACCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CAA 72 bp GTCACAGCGGTAGGATCCAGGGAGGTTATAGCACAGTaGGCCCTCGCCACAGCGATGCACACCTGTCTCACA +
Preference number: 6 (lower is better)
Translates to: VTAVGSREVIAQ*ALATAMHTCLT
Trigger: TGTGAGACAGGTGTGCATCGCTGTGGCGAGGGCCAACTGTGCTATAACCTCCCTGGATCCTACCGCTGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CAA 90 bp CCACACTGCGGGCAGCTGTCGGCTACTACTACAGCTTCAATGCAGTaGGGTGGTAGCTCAGGGCACAGCATGAACTGGCAGCTGATCTTG +
Preference number: 6 (lower is better)
Translates to: PHCGQLSATTTASMQ*GGSSGHSMNWQLIL
Trigger: CAAGATCAGCTGCCAGTTCATGCTGTGCCCTGAGCTACCACCCAACTGCATTGAAGCTGTAGTAGTAGCCGACAGCTGCCCGCAGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CAA 90 bp ATGGCCCACTGCTGGCCCGCTGCACAACAGGTCTCGATTAGGTCCTaGGTGGAGCCATCAAGATCACCTCTGGGGACAGAATGTACTGAG +
Preference number: 6 (lower is better)
Translates to: MAHCWPAAQQVSIRS*VEPSRSPLGTECTE
Trigger: CTCAGTACATTCTGTCCCCAGAGGTGATCTTGATGGCTCCACCAAGGACCTAATCGAGACCTGTTGTGCAGCGGGCCAGCAGTGGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS TCA 72 bp AGAAGTTCCCATGGCAACCAGGAAGCTGGTAGCAAATaGGCTCACCACCAGCGTCAGGACAGTGGCAAGCCC +
Preference number: 6 (lower is better)
Translates to: RSSHGNQEAGSK*AHHQRQDSGKP
Trigger: GGGCTTGCCACTGTCCTGACGCTGGTGGTGAGCTCATTTGCTACCAGCTTCCTGGTTGCCATGGGAACTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS TCA 72 bp CTGAGCGGCAAGGCTCCAGTAACGATGTGCATTCGTTaGTGTCCACACAGTTGCCCTCGGGGTCCTGCAAGA +
Preference number: 6 (lower is better)
Translates to: LSGKAPVTMCIR*CPHSCPRGPAR
Trigger: TCTTGCAGGACCCCGAGGGCAACTGTGTGGACATCAACGAATGCACATCGTTACTGGAGCCTTGCCGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 72 bp CCAGCATTCGTTCACATCAATGCAAGTCCTGCCGAATaGATCCCTCTGGAAGCCGGGCTTGCAGTCACAGCG +
Preference number: 6 (lower is better)
Translates to: PAFVHINASPAE*IPLEAGLAVTA
Trigger: CGCTGTGACTGCAAGCCCGGCTTCCAGAGGGATGCATTCGGCAGGACTTGCATTGATGTGAACGAATGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 72 bp CTCGCACTCGTTCACATCTTCACAATGTTTGCCATCTaGGGCCAAAAGGAAGCCAGCAGCGCAGGAGCAGCG +
Preference number: 6 (lower is better)
Translates to: LALVHIFTMFAI*GQKEASSAGAA
Trigger: CGCTGCTCCTGCGCTGCTGGCTTCCTTTTGGCCGCAGATGGCAAACATTGTGAAGATGTGAACGAGTGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 72 bp TCTTCTGCCCGGAATCGAGGTAGCAACTGTGGATGCTaGGGTATTTCTTCAGGTGTCTCTGGGGAGGGGGAG +
Preference number: 6 (lower is better)
Translates to: SSARNRGSNCGC*GISSGVSGEGE
Trigger: CTCCCCCTCCCCAGAGACACCTGAAGAAATACCCCAGCATCCACAGTTGCTACCTCGATTCCGGGCAGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 72 bp ATCTCCTGGCACTCATCATTGTCGATGGCCCACTGCTaGCCCGCTGCACAACAGGTCTCGATTAGGTCCTTG +
Preference number: 6 (lower is better)
Translates to: ISWHSSLSMAHC*PAAQQVSIRSL
Trigger: CAAGGACCTAATCGAGACCTGTTGTGCAGCGGGCCAGCAGTGGGCCATCGACAATGATGAGTGCCAGGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 72 bp GTGCACACTCATCCAGGTCCTTGCAGGACCTCCCGTTaGCCATCATTGTATACCCTTGCTCTGGGCATGCAC +
Preference number: 6 (lower is better)
Translates to: VHTHPGPCRTSR*PSLYTLALGMH
Trigger: GTGCATGCCCAGAGCAAGGGTATACAATGATGGCCAACGGGAGGTCCTGCAAGGACCTGGATGAGTGTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CAA 72 bp GGGCAGCTGTCGGCTACTACTACAGCTTCAATGCAGTaGGGTGGTAGCTCAGGGCACAGCATGAACTGGCAG +
Preference number: 6 (lower is better)
Translates to: GQLSATTTASMQ*GGSSGHSMNWQ
Trigger: CTGCCAGTTCATGCTGTGCCCTGAGCTACCACCCAACTGCATTGAAGCTGTAGTAGTAGCCGACAGCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CAA 72 bp CGCCGAGTCTCGCACTCGTTCACATCTTCACAATGTTaGCCATCTGCGGCCAAAAGGAAGCCAGCAGCGCAG +
Preference number: 6 (lower is better)
Translates to: RRVSHSFTSSQC*PSAAKRKPAAQ
Trigger: CTGCGCTGCTGGCTTCCTTTTGGCCGCAGATGGCAAACATTGTGAAGATGTGAACGAGTGCGAGACTCGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CAA 72 bp CATCCAGGTCCTTGCAGGACCTCCCGTTGGCCATCATaGTATACCCTTGCTCTGGGCATGCACACTGGTAGC +
Preference number: 6 (lower is better)
Translates to: HPGPCRTSRWPS*YTLALGMHTGS
Trigger: GCTACCAGTGTGCATGCCCAGAGCAAGGGTATACAATGATGGCCAACGGGAGGTCCTGCAAGGACCTGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS TCA 72 bp TCCCAGGCCACAGCAGTCACAGCATTGCTTGTAGAGTaGGACGCCGCAGGTATCATTGTCCTCTGCTCCACA +
Preference number: 6 (lower is better)
Translates to: SQATAVTALLVE*DAAGIIVLCST
Trigger: TGTGGAGCAGAGGACAATGATACCTGCGGCGTCTCACTCTACAAGCAATGCTGTGACTGCTGTGGCCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 72 bp TGTTCTGGCATGAGAAGCCTGCCTGGCAGTTGTGTGTaGCCGTCACACATTCGTCCACGTCTGTGCATTCAC +
Preference number: 6 (lower is better)
Translates to: CSGMRSLPGSCV*PSHIRPRLCIH
Trigger: GTGAATGCACAGACGTGGACGAATGTGTGACGGGCACACACAACTGCCAGGCAGGCTTCTCATGCCAGAACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 72 bp GGCCCGCTGCACAACAGGTCTCGATTAGGTCCTTGGTaGAGCCATCAAGATCACCTCTGGGGACAGAATGTA +
Preference number: 6 (lower is better)
Translates to: GPLHNRSRLGPW*SHQDHLWGQNV
Trigger: TACATTCTGTCCCCAGAGGTGATCTTGATGGCTCCACCAAGGACCTAATCGAGACCTGTTGTGCAGCGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 72 bp CAGCATTGCCTCTGGGCTATCCTACAGATGTCACTCTaGGCACCATTCTCGGGGATCTCCTGGCACTCATCA +
Preference number: 6 (lower is better)
Translates to: QHCLWAILQMSL*APFSGISWHSS
Trigger: TGATGAGTGCCAGGAGATCCCCGAGAATGGTGCCCAGAGTGACATCTGTAGGATAGCCCAGAGGCAATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 72 bp TGCGCTCGCACTTCGTTTCTGAGACACGGACATAGTTaGGTGGACAATCAAAGCGCAGGCAGCGGAAACTCC +
Preference number: 6 (lower is better)
Translates to: CARTSFLRHGHS*VDNQSAGSGNS
Trigger: GGAGTTTCCGCTGCCTGCGCTTTGATTGTCCACCCAACTATGTCCGTGTCTCAGAAACGAAGTGCGAGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CAA 72 bp AGTGCACACTCATCCAGGTCCTTGCAGGACCTCCCGTaGGCCATCATTGTATACCCTTGCTCTGGGCATGCA +
Preference number: 6 (lower is better)
Translates to: SAHSSRSLQDLP*AIIVYPCSGHA
Trigger: TGCATGCCCAGAGCAAGGGTATACAATGATGGCCAACGGGAGGTCCTGCAAGGACCTGGATGAGTGTGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 72 bp GACCTCGTTCACAATGGCCGTAGTAGCTTCTGCCTCTaGCACCTCCTGGTCATAGCTGTAGGGGTCTTCATA +
Preference number: 6 (lower is better)
Translates to: DLVHNGRSSFCL*HLLVIAVGVFI
Trigger: TATGAAGACCCCTACAGCTATGACCAGGAGGTGGCAGAGGCAGAAGCTACTACGGCCATTGTGAACGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 72 bp ACTGATAGGAGCCATAGATGTTGGCACATTCCTGGCTaGAGCGCCGAGTCTCGCACTCGTTCACATCTTCAC +
Preference number: 6 (lower is better)
Translates to: TDRSHRCWHIPG*SAESRTRSHLH
Trigger: GTGAAGATGTGAACGAGTGCGAGACTCGGCGCTGCAGCCAGGAATGTGCCAACATCTATGGCTCCTATCAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CAA 72 bp TCCAGTAACGATGTGCATTCGTTGATGTCCACACAGTaGCCCTCGGGGTCCTGCAAGAAGCCATCCATGCAG +
Preference number: 6 (lower is better)
Translates to: SSNDVHSLMSTQ*PSGSCKKPSMQ
Trigger: CTGCATGGATGGCTTCTTGCAGGACCCCGAGGGCAACTGTGTGGACATCAACGAATGCACATCGTTACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CAA 90 bp GACCCCAGCCACACAGCTCTTCTCTTTCAAGTAGGAGATGCAGCATaGCCTCTGGGCTATCCTACAGATGTCACTCTGGGCACCATTCTC +
Preference number: 6 (lower is better)
Translates to: DPSHTALLFQVGDAA*PLGYPTDVTLGTIL
Trigger: GAGAATGGTGCCCAGAGTGACATCTGTAGGATAGCCCAGAGGCAATGCTGCATCTCCTACTTGAAAGAGAAGAGCTGTGTGGCTGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS TCA 72 bp GGAGCCATCAAGATCACCTCTGGGGACAGAATGTACTaGGTTGGGGTCTATGTCTTCTTCTGCCCGGAATCG +
Preference number: 6 (lower is better)
Translates to: GAIKITSGDRMY*VGVYVFFCPES
Trigger: CGATTCCGGGCAGAAGAAGACATAGACCCCAACTCAGTACATTCTGTCCCCAGAGGTGATCTTGATGGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS CCA 72 bp ATGTACATCTTGGCCAGGAAGGTAGTGACAGAGCCCTaGCGCCAAAGCTTCATCTCCACATCTAGGGCAAAG +
Preference number: 6 (lower is better)
Translates to: MYILARKVVTEP*RQSFISTSRAK
Trigger: CTTTGCCCTAGATGTGGAGATGAAGCTTTGGCGCCAGGGCTCTGTCACTACCTTCCTGGCCAAGATGTACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS TCA 72 bp CTGGAAATTGAGCTGGTAGTGCGTGATGCGAGCTGGTaGGGTTTGACATTCCGTGATATCCTGGCATGTGGT +
Preference number: 6 (lower is better)
Translates to: LEIELVVRDASW*GLTFRDILACG
Trigger: ACCACATGCCAGGATATCACGGAATGTCAAACCTCACCAGCTCGCATCACGCACTACCAGCTCAATTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041544.8
ENSMUST00000113498.9
CDS GCA 72 bp CACACACTTCCTATGTGCGTTGAGGATATAGCCCTCTaGACACAGCACTGTGTGGTTGACACAGTAGAAGGA +
Preference number: 6 (lower is better)
Translates to: HTLPMCVEDIAL*TQHCVVDTVEG
Trigger: TCCTTCTACTGTGTCAACCACACAGTGCTGTGTGCAGAGGGCTATATCCTCAACGCACATAGGAAGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041544.8
CDS TCA 72 bp AGGGTGTTCACACAGAACTGTTTCCAGCTACAATCGTaGGTGCCCATCAAACACTCGTCTTGGTCTTCACAG +
Preference number: 6 (lower is better)
Translates to: RVFTQNCFQLQS*VPIKHSSWSSQ
Trigger: CTGTGAAGACCAAGACGAGTGTTTGATGGGCACTCACGATTGTAGCTGGAAACAGTTCTGTGTGAACACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041544.8
CDS GCA 72 bp TGTCACACACTCATTGATGTCCACACACTTCCTATGTaGGTTGAGGATATAGCCCTCTGCACACAGCACTGT +
Preference number: 6 (lower is better)
Translates to: CHTLIDVHTLPM*VEDIALCTQHC
Trigger: ACAGTGCTGTGTGCAGAGGGCTATATCCTCAACGCACATAGGAAGTGTGTGGACATCAATGAGTGTGTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041544.8
CDS GCA 72 bp TGTTCACACAGAACTGTTTCCAGCTACAATCGTGAGTaGCCATCAAACACTCGTCTTGGTCTTCACAGGACA +
Preference number: 6 (lower is better)
Translates to: CSHRTVSSYNRE*PSNTRLGLHRT
Trigger: TGTCCTGTGAAGACCAAGACGAGTGTTTGATGGGCACTCACGATTGTAGCTGGAAACAGTTCTGTGTGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041544.8