Pregenerated sensors for FBLL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051062Ensembl transcript IDs: ENSMUST00000160726.4
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GCACAAAGACACAGTCTTGTGGCAGCGCGGGGGCACCTTCCCTGGTTTCTGCTGGCTTCTTGGCCACGTTaGCCAGATCGCGGCCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: AQRHSLVAARGHLPWFLLASWPR*PDRGRR Trigger: GCGCCGGCCGCGATCTGGTCAACGTGGCCAAGAAGC...CAGCAGAAACCAGGGAAGGTGCCCCCGCGCTGCCACAAGACTGTGTCTTTGTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS-3UTR GCA 90 bp | ACAAAGACACAGTCTTGTGGCAGCGCGGGGGCACCTTCCCTGGTTTCTGCTGCTCGCTGGAGCCGCGTGTaGGTGCCCCGAAGCCGCCTT | + |
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Preference number: 4 (lower is better) Translates to: TKTQSCGSAGAPSLVSAARWSRV*VPRSRL Trigger: AAGGCGGCTTCGGGGCACGCACACGCGGCTCCAGCG...AGCAGCAGAAACCAGGGAAGGTGCCCCCGCGCTGCCACAAGACTGTGTCTTTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS-3UTR TCA 90 bp | ACAAAGACACAGTCTTGTGGCAGCGCGGGGGCACCTTCCCTGGTTTCTGCTGCTCCGCGCCGCGGTAGATaGACACGCCCTCGTGCCGAT | + |
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Preference number: 4 (lower is better) Translates to: TKTQSCGSAGAPSLVSAAPRRGR*TRPRAD Trigger: ATCGGCACGAGGGCGTGTTCATCTACCGCGGCGCGG...AGCAGCAGAAACCAGGGAAGGTGCCCCCGCGCTGCCACAAGACTGTGTCTTTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS-3UTR GCA 90 bp | CACAAAGACACAGTCTTGTGGCAGCGCGGGGGCACCTTCCCTGGTTTCTGCTGCTGTCACCTCCCTTGCTaGCTCCCTTGCCGCCACCCC | + |
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Preference number: 4 (lower is better) Translates to: HKDTVLWQRGGTFPGFCCCHLPC*LPCRHP Trigger: GGGGTGGCGGCAAGGGAGGCAGCAAGGGAGGTGACA...GCAGCAGAAACCAGGGAAGGTGCCCCCGCGCTGCCACAAGACTGTGTCTTTGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS-3UTR GCA 90 bp | GCACAAAGACACAGTCTTGTGGCAGCGCGGGGGCACCTTCCCTGGTTTCTGCTGCCGTGTCACCTCCCTTaGTGCCTCCCTTGCCGCCAC | + |
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Preference number: 4 (lower is better) Translates to: AQRHSLVAARGHLPWFLLPCHLP*CLPCRH Trigger: GTGGCGGCAAGGGAGGCAGCAAGGGAGGTGACACGG...CAGCAGAAACCAGGGAAGGTGCCCCCGCGCTGCCACAAGACTGTGTCTTTGTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS-3UTR GCA 90 bp | ACAAAGACACAGTCTTGTGGCAGCGCGGGGGCACCTTCCCTGGTTTCTGCTGCTACGCCCTCGTGCCGATaGGGCTCCACCGACACCGTG | + |
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Preference number: 4 (lower is better) Translates to: TKTQSCGSAGAPSLVSAATPSCR*GSTDTV Trigger: CACGGTGTCGGTGGAGCCGCATCGGCACGAGGGCGT...AGCAGCAGAAACCAGGGAAGGTGCCCCCGCGCTGCCACAAGACTGTGTCTTTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS-3UTR CCA 90 bp | CACAAAGACACAGTCTTGTGGCAGCGCGGGGGCACCTTCCCTGGTTTCTGCTGCCCCCGAAGCCGCCTTTaGTCCCTGAGCCCGTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: HKDTVLWQRGGTFPGFCCPRSRL*SLSPCH Trigger: GTGACACGGGCTCAGGGACCAAAGGCGGCTTCGGGG...GCAGCAGAAACCAGGGAAGGTGCCCCCGCGCTGCCACAAGACTGTGTCTTTGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS-3UTR TCA 90 bp | ACAAAGACACAGTCTTGTGGCAGCGCGGGGGCACCTTCCCTGGTTTCTGCTGCTGCTCCACCGACACCGTaGTGCCCTTCTTGCGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: TKTQSCGSAGAPSLVSAAAPPTP*CPSCGG Trigger: ACCGCCGCAAGAAGGGCATCACGGTGTCGGTGGAGC...AGCAGCAGAAACCAGGGAAGGTGCCCCCGCGCTGCCACAAGACTGTGTCTTTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS-3UTR GCA 90 bp | CACAAAGACACAGTCTTGTGGCAGCGCGGGGGCACCTTCCCTGGTTTCTGCTGCATGAACACGCCCTCGTaGCGATGCGGCTCCACCGAC | + |
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Preference number: 4 (lower is better) Translates to: HKDTVLWQRGGTFPGFCCMNTPS*RCGSTD Trigger: GTCGGTGGAGCCGCATCGGCACGAGGGCGTGTTCAT...GCAGCAGAAACCAGGGAAGGTGCCCCCGCGCTGCCACAAGACTGTGTCTTTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS-3UTR CCA 90 bp | ACAAAGACACAGTCTTGTGGCAGCGCGGGGGCACCTTCCCTGGTTTCTGCTGCTCCACGCCGCCCAGGATaGCCGCTGCCAATTTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: TKTQSCGSAGAPSLVSAAPRRPG*PLPIWS Trigger: GCTCCAAATTGGCAGCGGCCATCCTGGGCGGCGTGG...AGCAGCAGAAACCAGGGAAGGTGCCCCCGCGCTGCCACAAGACTGTGTCTTTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS-3UTR CCA 90 bp | ACAAAGACACAGTCTTGTGGCAGCGCGGGGGCACCTTCCCTGGTTTCTGCTGCTCTACTTGCTCTTGGGTaGGGGCCGATAGACCCCGAC | + |
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Preference number: 4 (lower is better) Translates to: TKTQSCGSAGAPSLVSAALLALG*GPIDPD Trigger: GTCGGGGTCTATCGGCCCCCACCCAAGAGCAAGTAG...AGCAGCAGAAACCAGGGAAGGTGCCCCCGCGCTGCCACAAGACTGTGTCTTTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS-3UTR TCA 90 bp | ACAAAGACACAGTCTTGTGGCAGCGCGGGGGCACCTTCCCTGGTTTCTGCTGCTCTTCCAGCACCGGGATaGTGTTGGTGCGCTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: TKTQSCGSAGAPSLVSAALPAPG*CWCASW Trigger: CCAAGAAGCGCACCAACATCATCCCGGTGCTGGAAG...AGCAGCAGAAACCAGGGAAGGTGCCCCCGCGCTGCCACAAGACTGTGTCTTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS-3UTR CCA 90 bp | ACAAAGACACAGTCTTGTGGCAGCGCGGGGGCACCTTCCCTGGTTTCTGCTGCTTGGCCGCTGCCAATTTaGAGCGGAAGGGATTCCACG | + |
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Preference number: 4 (lower is better) Translates to: TKTQSCGSAGAPSLVSAAWPLPI*SGRDST Trigger: CGTGGAATCCCTTCCGCTCCAAATTGGCAGCGGCCA...AGCAGCAGAAACCAGGGAAGGTGCCCCCGCGCTGCCACAAGACTGTGTCTTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS-3UTR GCA 90 bp | ACAAAGACACAGTCTTGTGGCAGCGCGGGGGCACCTTCCCTGGTTTCTGCTGCTGGCTCCAGAGTCAGCTaGTCCTGTGGCTTCAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: TKTQSCGSAGAPSLVSAAGSRVS*SCGFKF Trigger: GAACTTGAAGCCACAGGAGCAGCTGACTCTGGAGCC...AGCAGCAGAAACCAGGGAAGGTGCCCCCGCGCTGCCACAAGACTGTGTCTTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS-3UTR GCA 90 bp | ACAAAGACACAGTCTTGTGGCAGCGCGGGGGCACCTTCCCTGGTTTCTGCTGCTTTCAAGTTCTCCTGTTaGAGCTTCCTCACCTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: TKTQSCGSAGAPSLVSAAFKFSC*SFLTSE Trigger: TTCTGAGGTGAGGAAGCTGCAACAGGAGAACTTGAA...AGCAGCAGAAACCAGGGAAGGTGCCCCCGCGCTGCCACAAGACTGTGTCTTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS CCA 90 bp | GGCCGCCGCCGCTGGAGCCGCGTGTGCGTGCCCCGAAGCCGCCTTTaGTCCCTGAGCCCGTGTCACCTCCCTTGCTGCCTCCCTTGCCGC | + |
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Preference number: 5 (lower is better) Translates to: GRRRWSRVCVPRSRL*SLSPCHLPCCLPCR Trigger: GCGGCAAGGGAGGCAGCAAGGGAGGTGACACGGGCTCAGGGACCAAAGGCGGCTTCGGGGCACGCACACGCGGCTCCAGCGGCGGCGGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS TCA 90 bp | GCCGCTGGAGCCGCGTGTGCGTGCCCCGAAGCCGCCTTTGGTCCCTaGGCCCGTGTCACCTCCCTTGCTGCCTCCCTTGCCGCCACCCCA | + |
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Preference number: 5 (lower is better) Translates to: AAGAACACPEAAFGP*ARVTSLAASLAATP Trigger: TGGGGTGGCGGCAAGGGAGGCAGCAAGGGAGGTGACACGGGCTCAGGGACCAAAGGCGGCTTCGGGGCACGCACACGCGGCTCCAGCGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS TCA 90 bp | CGCGATGGGAGAATTCAACCGCATAGACCAGGCCGTCGGGGCCGATaGTGTCGGAGACGTGTGAGACAGTGGTTCCGGAGGCGGCGCCCA | + |
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Preference number: 5 (lower is better) Translates to: RDGRIQPHRPGRRGR*CRRRVRQWFRRRRP Trigger: TGGGCGCCGCCTCCGGAACCACTGTCTCACACGTCTCCGACATCATCGGCCCCGACGGCCTGGTCTATGCGGTTGAATTCTCCCATCGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS-3UTR CAA 90 bp | CACAAAGACACAGTCTTGTGGCAGCGCGGGGGCACCTTCCCTGGTTTCTGCTGCCCCGTGTCACCTCCCTaGCTGCCTCCCTTGCCGCCA | + |
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Preference number: 5 (lower is better) Translates to: HKDTVLWQRGGTFPGFCCPVSPP*LPPLPP Trigger: TGGCGGCAAGGGAGGCAGCAAGGGAGGTGACACGGG...GCAGCAGAAACCAGGGAAGGTGCCCCCGCGCTGCCACAAGACTGTGTCTTTGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS-3UTR CAA 90 bp | GCACAAAGACACAGTCTTGTGGCAGCGCGGGGGCACCTTCCCTGGTTTCTGCTGCGCTTCTTGGCCACGTaGACCAGATCGCGGCCGGCG | + |
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Preference number: 5 (lower is better) Translates to: AQRHSLVAARGHLPWFLLRFLAT*TRSRPA Trigger: CGCCGGCCGCGATCTGGTCAACGTGGCCAAGAAGCG...CAGCAGAAACCAGGGAAGGTGCCCCCGCGCTGCCACAAGACTGTGTCTTTGTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS TCA 90 bp | AACCGCATAGACCAGGCCGTCGGGGCCGATGATGTCGGAGACGTGTaGGACAGTGGTTCCGGAGGCGGCGCCCAGGTACAACACTTTGGA | + |
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Preference number: 5 (lower is better) Translates to: NRIDQAVGADDVGDV*DSGSGGGAQVQHFG Trigger: TCCAAAGTGTTGTACCTGGGCGCCGCCTCCGGAACCACTGTCTCACACGTCTCCGACATCATCGGCCCCGACGGCCTGGTCTATGCGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS TCA 90 bp | GATTCCACGTGCGGTACTCCTGTTTCTCCCCGTTCTCCATCACGGTaGCGCGCTTCTCGCCGTACACCGAGACTCCAGGCACCATGTTCA | + |
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Preference number: 5 (lower is better) Translates to: DSTCGTPVSPRSPSR*RASRRTPRLQAPCS Trigger: TGAACATGGTGCCTGGAGTCTCGGTGTACGGCGAGAAGCGCGTCACCGTGATGGAGAACGGGGAGAAACAGGAGTACCGCACGTGGAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS-3UTR CAA 90 bp | ACAAAGACACAGTCTTGTGGCAGCGCGGGGGCACCTTCCCTGGTTTCTGCTGCTATGAGCATGCGATACTaGAGCGGGTGCCGGGCATCT | + |
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Preference number: 5 (lower is better) Translates to: TKTQSCGSAGAPSLVSAAMSMRY*SGCRAS Trigger: AGATGCCCGGCACCCGCTCAAGTATCGCATGCTCAT...AGCAGCAGAAACCAGGGAAGGTGCCCCCGCGCTGCCACAAGACTGTGTCTTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS-3UTR CAA 90 bp | GCACAAAGACACAGTCTTGTGGCAGCGCGGGGGCACCTTCCCTGGTTTCTGCTGACTTTGGACTTGGGCTaGATGTGGATCTGGTCCACG | + |
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Preference number: 5 (lower is better) Translates to: AQRHSLVAARGHLPWFLLTLDLG*MWIWST Trigger: CGTGGACCAGATCCACATCAAGCCCAAGTCCAAAGT...CAGCAGAAACCAGGGAAGGTGCCCCCGCGCTGCCACAAGACTGTGTCTTTGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS-3UTR CAA 90 bp | GCACAAAGACACAGTCTTGTGGCAGCGCGGGGGCACCTTCCCTGGTTTCTGCTGCCCAGGTACAACACTTaGGACTTGGGCTTGATGTGG | + |
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Preference number: 5 (lower is better) Translates to: AQRHSLVAARGHLPWFLLPRYNT*DLGLMW Trigger: CCACATCAAGCCCAAGTCCAAAGTGTTGTACCTGGG...CAGCAGAAACCAGGGAAGGTGCCCCCGCGCTGCCACAAGACTGTGTCTTTGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS-3UTR CAA 90 bp | ACAAAGACACAGTCTTGTGGCAGCGCGGGGGCACCTTCCCTGGTTTCTGCTGCTATGTTGGTGCGCTTCTaGGCCACGTTGACCAGATCG | + |
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Preference number: 5 (lower is better) Translates to: TKTQSCGSAGAPSLVSAAMLVRF*ATLTRS Trigger: CGATCTGGTCAACGTGGCCAAGAAGCGCACCAACAT...AGCAGCAGAAACCAGGGAAGGTGCCCCCGCGCTGCCACAAGACTGTGTCTTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS-3UTR CAA 90 bp | CACAAAGACACAGTCTTGTGGCAGCGCGGGGGCACCTTCCCTGGTTTCTGCTGCGTGGAGTCGATGCAGTaGGCCTTGATGGAAATGAGA | + |
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Preference number: 5 (lower is better) Translates to: HKDTVLWQRGGTFPGFCCVESMQ*ALMEMR Trigger: TCTCATTTCCATCAAGGCCAACTGCATCGACTCCAC...GCAGCAGAAACCAGGGAAGGTGCCCCCGCGCTGCCACAAGACTGTGTCTTTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS-3UTR CAA 90 bp | CACAAAGACACAGTCTTGTGGCAGCGCGGGGGCACCTTCCCTGGTTTCTGCTGCTCGATGCAGTTGGCCTaGATGGAAATGAGAAAGTGG | + |
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Preference number: 5 (lower is better) Translates to: HKDTVLWQRGGTFPGFCCSMQLA*MEMRKW Trigger: CCACTTTCTCATTTCCATCAAGGCCAACTGCATCGA...GCAGCAGAAACCAGGGAAGGTGCCCCCGCGCTGCCACAAGACTGTGTCTTTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS-3UTR CAA 90 bp | ACAAAGACACAGTCTTGTGGCAGCGCGGGGGCACCTTCCCTGGTTTCTGCTGCTTACAACACTTTGGACTaGGGCTTGATGTGGATCTGG | + |
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Preference number: 5 (lower is better) Translates to: TKTQSCGSAGAPSLVSAAYNTLD*GLMWIW Trigger: CCAGATCCACATCAAGCCCAAGTCCAAAGTGTTGTA...AGCAGCAGAAACCAGGGAAGGTGCCCCCGCGCTGCCACAAGACTGTGTCTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS CAA 90 bp | CGGCCGCCGCCGCTGGAGCCGCGTGTGCGTGCCCCGAAGCCGCCTTaGGTCCCTGAGCCCGTGTCACCTCCCTTGCTGCCTCCCTTGCCG | + |
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Preference number: 6 (lower is better) Translates to: RPPPLEPRVRAPKPP*VPEPVSPPLLPPLP Trigger: CGGCAAGGGAGGCAGCAAGGGAGGTGACACGGGCTCAGGGACCAAAGGCGGCTTCGGGGCACGCACACGCGGCTCCAGCGGCGGCGGCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS TCA 72 bp | GCCGCGTGTGCGTGCCCCGAAGCCGCCTTTGGTCCCTaGGCCCGTGTCACCTCCCTTGCTGCCTCCCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: AACACPEAAFGP*ARVTSLAASLA Trigger: GGCAAGGGAGGCAGCAAGGGAGGTGACACGGGCTCAGGGACCAAAGGCGGCTTCGGGGCACGCACACGCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS CCA 72 bp | CGCTGGAGCCGCGTGTGCGTGCCCCGAAGCCGCCTTTaGTCCCTGAGCCCGTGTCACCTCCCTTGCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: RWSRVCVPRSRL*SLSPCHLPCCL Trigger: GAGGCAGCAAGGGAGGTGACACGGGCTCAGGGACCAAAGGCGGCTTCGGGGCACGCACACGCGGCTCCAGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS CAA 72 bp | CCGCTGGAGCCGCGTGTGCGTGCCCCGAAGCCGCCTTaGGTCCCTGAGCCCGTGTCACCTCCCTTGCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: PLEPRVRAPKPP*VPEPVSPPLLP Trigger: AGGCAGCAAGGGAGGTGACACGGGCTCAGGGACCAAAGGCGGCTTCGGGGCACGCACACGCGGCTCCAGCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS CAA 90 bp | CGATGCGGCTCCACCGACACCGTGATGCCCTTCTTGCGGCGGTTCTaGTTCTTGCCTGGACCGCCGCGTCGCTGCCTGTCGCCGCCGCCG | + |
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Preference number: 6 (lower is better) Translates to: RCGSTDTVMPFLRRF*FLPGPPRRCLSPPP Trigger: CGGCGGCGGCGACAGGCAGCGACGCGGCGGTCCAGGCAAGAACAAGAACCGCCGCAAGAAGGGCATCACGGTGTCGGTGGAGCCGCATCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS CAA 90 bp | ACGCCCTCGTGCCGATGCGGCTCCACCGACACCGTGATGCCCTTCTaGCGGCGGTTCTTGTTCTTGCCTGGACCGCCGCGTCGCTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: TPSCRCGSTDTVMPF*RRFLFLPGPPRRCL Trigger: CAGGCAGCGACGCGGCGGTCCAGGCAAGAACAAGAACCGCCGCAAGAAGGGCATCACGGTGTCGGTGGAGCCGCATCGGCACGAGGGCGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS TCA 72 bp | GACCAGGCCGTCGGGGCCGATGATGTCGGAGACGTGTaGGACAGTGGTTCCGGAGGCGGCGCCCAGGTACAA | + |
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Preference number: 6 (lower is better) Translates to: DQAVGADDVGDV*DSGSGGGAQVQ Trigger: TTGTACCTGGGCGCCGCCTCCGGAACCACTGTCTCACACGTCTCCGACATCATCGGCCCCGACGGCCTGGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS CAA 72 bp | TGCCGATGCGGCTCCACCGACACCGTGATGCCCTTCTaGCGGCGGTTCTTGTTCTTGCCTGGACCGCCGCGT | + |
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Preference number: 6 (lower is better) Translates to: CRCGSTDTVMPF*RRFLFLPGPPR Trigger: ACGCGGCGGTCCAGGCAAGAACAAGAACCGCCGCAAGAAGGGCATCACGGTGTCGGTGGAGCCGCATCGGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS TCA 72 bp | ACACGCCCTCGTGCCGATGCGGCTCCACCGACACCGTaGTGCCCTTCTTGCGGCGGTTCTTGTTCTTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: TRPRADAAPPTP*CPSCGGSCSCL Trigger: CAGGCAAGAACAAGAACCGCCGCAAGAAGGGCATCACGGTGTCGGTGGAGCCGCATCGGCACGAGGGCGTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS TCA 72 bp | TGCGGTACTCCTGTTTCTCCCCGTTCTCCATCACGGTaGCGCGCTTCTCGCCGTACACCGAGACTCCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: CGTPVSPRSPSR*RASRRTPRLQA Trigger: TGCCTGGAGTCTCGGTGTACGGCGAGAAGCGCGTCACCGTGATGGAGAACGGGGAGAAACAGGAGTACCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS TCA 72 bp | AGAATTCAACCGCATAGACCAGGCCGTCGGGGCCGATaGTGTCGGAGACGTGTGAGACAGTGGTTCCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RIQPHRPGRRGR*CRRRVRQWFRR Trigger: CCTCCGGAACCACTGTCTCACACGTCTCCGACATCATCGGCCCCGACGGCCTGGTCTATGCGGTTGAATTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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| CDS GCA 72 bp | TGGCCGCTGCCAATTTGGAGCGGAAGGGATTCCACGTaGGGTACTCCTGTTTCTCCCCGTTCTCCATCACGG | + |
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Preference number: 6 (lower is better) Translates to: WPLPIWSGRDST*GTPVSPRSPSR Trigger: CCGTGATGGAGAACGGGGAGAAACAGGAGTACCGCACGTGGAATCCCTTCCGCTCCAAATTGGCAGCGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160726.4 |
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