Pregenerated sensors for FBLIM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006219Ensembl transcript IDs: ENSMUST00000006381.11, ENSMUST00000105784.8, ENSMUST00000105785.9, ENSMUST00000123150.2, ENSMUST00000127455.8, ENSMUST00000129602.8, ENSMUST00000130181.8, ENSMUST00000131317.8, ENSMUST00000133874.2, ENSMUST00000136831.2, ENSMUST00000141518.8, ENSMUST00000147764.8, ENSMUST00000147785.8, ENSMUST00000153189.8
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCTTAATCCAGGTCTGGGAGCCCCTCACAGGAGCTCACAGGGTGTaGAAGCAAGCAGAGGCACGTGACCATCCTCCCTCCCATCCTGAG | + |
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Preference number: 1 (lower is better) Translates to: LLIQVWEPLTGAHRV*KQAEARDHPPSHPE Trigger: CTCAGGATGGGAGGGAGGATGGTCACGTGCCTCTGCTTGCTTCCACACCCTGTGAGCTCCTGTGAGGGGCTCCCAGACCTGGATTAAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR GCA 90 bp | TGTCCCCATAAACATGTCAGGGCAGCACTAGAGATGGACCAGGGTTaGAGTCTGGTGGTGAGAGGCCTCCTGGTCAATGAAGGGAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: CPHKHVRAALEMDQG*SLVVRGLLVNEGRG Trigger: TCCTCTCCCTTCATTGACCAGGAGGCCTCTCACCACCAGACTGCAACCCTGGTCCATCTCTAGTGCTGCCCTGACATGTTTATGGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR TCA 90 bp | CTCTCCGGAAACTGGAGTTGCAGGACAGGTAGTTATGAGCCTCCATaGGGGATGCTGGGAAATGAACTCTGGTCCTCCGCAAGAGGAGCA | + |
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Preference number: 1 (lower is better) Translates to: LSGNWSCRTGSYEPP*GMLGNELWSSARGA Trigger: TGCTCCTCTTGCGGAGGACCAGAGTTCATTTCCCAGCATCCCTCATGGAGGCTCATAACTACCTGTCCTGCAACTCCAGTTTCCGGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR CCA 90 bp | CCTCGAACTTGTTCCTTAGCAAATCAAAGGCTCTTAATCCAGGTCTaGGAGCCCCTCACAGGAGCTCACAGGGTGTGGAAGCAAGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: PRTCSLANQRLLIQV*EPLTGAHRVWKQAE Trigger: CTCTGCTTGCTTCCACACCCTGTGAGCTCCTGTGAGGGGCTCCCAGACCTGGATTAAGAGCCTTTGATTTGCTAAGGAACAAGTTCGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR CCA 90 bp | AAACTGATTGGGAATTCTATGAAGTCTAAGCAGGTCGCAAGCTTCTaGCAATTTCCCCCAGCACTGGGATCACAGATTTGCACCACCAAA | + |
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Preference number: 1 (lower is better) Translates to: KLIGNSMKSKQVASF*QFPPALGSQICTTK Trigger: TTTGGTGGTGCAAATCTGTGATCCCAGTGCTGGGGGAAATTGCCAGAAGCTTGCGACCTGCTTAGACTTCATAGAATTCCCAATCAGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR TCA 90 bp | TGGGAGCCCCTCACAGGAGCTCACAGGGTGTGGAAGCAAGCAGAGGCACGTGACTCCTCCCTCCCATCCTaGGCCCAGCTCAGCACGGAT | + |
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Preference number: 2 (lower is better) Translates to: WEPLTGAHRVWKQAEARDSSLPS*AQLSTD Trigger: ATCCGTGCTGAGCTGGGCTCAGGATGGGAGGGAGGA...GTCACGTGCCTCTGCTTGCTTCCACACCCTGTGAGCTCCTGTGAGGGGCTCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR TCA 90 bp | GCCAGAGCCCCAGTAAAGTCTGGAGGAAGGAGGCTCAGCCTCGAACTTGTTCCTTCCTCCCTCCCATCCTaGGCCCAGCTCAGCACGGAT | + |
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Preference number: 2 (lower is better) Translates to: ARAPVKSGGRRLSLELVPSSLPS*AQLSTD Trigger: ATCCGTGCTGAGCTGGGCTCAGGATGGGAGGGAGGA...AGGAACAAGTTCGAGGCTGAGCCTCCTTCCTCCAGACTTTACTGGGGCTCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR GCA 90 bp | CTCCCTCCCATCCTGAGCCCAGCTCAGCACGGATTCTACAGGAAGGAAGGCTGGGAGATGGACCAGGGTTaGAGTCTGGTGGTGAGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: LPPILSPAQHGFYRKEGWEMDQG*SLVVRG Trigger: GCCTCTCACCACCAGACTGCAACCCTGGTCCATCTC...CCAGCCTTCCTTCCTGTAGAATCCGTGCTGAGCTGGGCTCAGGATGGGAGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR TCA 90 bp | GTGTGTGCGCGCGTGCGCGCACTTGTAGAGGCCAGAGCCCCAGTAAAGTCTGGAAGGCCTCCTGGTCAATaGAGGGAGAGGAGTAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: VCARVRALVEARAPVKSGRPPGQ*RERSRK Trigger: CTTTCTACTCCTCTCCCTTCATTGACCAGGAGGCCT...TCCAGACTTTACTGGGGCTCTGGCCTCTACAAGTGCGCGCACGCGCGCACACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR TCA 90 bp | AGTGGTTACGGGCAGCCTAGCAGCAAAGCTGAAGTGGAGGCTGGGTGGCACACAAGGCCTCCTGGTCAATaGAGGGAGAGGAGTAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: SGYGQPSSKAEVEAGWHTRPPGQ*RERSRK Trigger: CTTTCTACTCCTCTCCCTTCATTGACCAGGAGGCCT...TGTGTGCCACCCAGCCTCCACTTCAGCTTTGCTGCTAGGCTGCCCGTAACCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR TCA 90 bp | CATCCTCCCTCCCATCCTGAGCCCAGCTCAGCACGGATTCTACAGGAAGGAAGGAGGCCTCCTGGTCAATaGAGGGAGAGGAGTAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: HPPSHPEPSSARILQEGRRPPGQ*RERSRK Trigger: CTTTCTACTCCTCTCCCTTCATTGACCAGGAGGCCT...CCTTCCTTCCTGTAGAATCCGTGCTGAGCTGGGCTCAGGATGGGAGGGAGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR TCA 90 bp | CTCCCTCCCATCCTGAGCCCAGCTCAGCACGGATTCTACAGGAAGGAAGGCTGGCATCTTCGCAGCCCCTaGACCAAGGGAAGATGTTTA | + |
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Preference number: 2 (lower is better) Translates to: LPPILSPAQHGFYRKEGWHLRSP*TKGRCL Trigger: TAAACATCTTCCCTTGGTTCAGGGGCTGCGAAGATG...CCAGCCTTCCTTCCTGTAGAATCCGTGCTGAGCTGGGCTCAGGATGGGAGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR CCA 90 bp | TGGAAGCAAGCAGAGGCACGTGACCATCCTCCCTCCCATCCTGAGCCCAGCTCACTCCATGAGGGATGCTaGGAAATGAACTCTGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: WKQAEARDHPPSHPEPSSLHEGC*EMNSGP Trigger: AGGACCAGAGTTCATTTCCCAGCATCCCTCATGGAG...TGAGCTGGGCTCAGGATGGGAGGGAGGATGGTCACGTGCCTCTGCTTGCTTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCACGGATTCTACAGGAAGGAAGGCTGGGTCGCCGCTACCTCACGTTCTACAGGTCGCAAGCTTCTaGCAATTTCCCCCAGCACTG | + |
|
Preference number: 2 (lower is better) Translates to: LSTDSTGRKAGSPLPHVLQVASF*QFPPAL Trigger: CAGTGCTGGGGGAAATTGCCAGAAGCTTGCGACCTG...TAGAACGTGAGGTAGCGGCGACCCAGCCTTCCTTCCTGTAGAATCCGTGCTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR CCA 90 bp | CCTAGCAGCAAAGCTGAAGTGGAGGCTGGGTGGCACACATGGGAGACCAAAGAGCAGGTCGCAAGCTTCTaGCAATTTCCCCCAGCACTG | + |
|
Preference number: 2 (lower is better) Translates to: PSSKAEVEAGWHTWETKEQVASF*QFPPAL Trigger: CAGTGCTGGGGGAAATTGCCAGAAGCTTGCGACCTG...CTCTTTGGTCTCCCATGTGTGCCACCCAGCCTCCACTTCAGCTTTGCTGCTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR CCA 90 bp | GCCAGAGCCCCAGTAAAGTCTGGAGGAAGGAGGCTCAGCCTCGAACTTGTTCCTCTCTTAATCCAGGTCTaGGAGCCCCTCACAGGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: ARAPVKSGGRRLSLELVPLLIQV*EPLTGA Trigger: AGCTCCTGTGAGGGGCTCCCAGACCTGGATTAAGAG...AGGAACAAGTTCGAGGCTGAGCCTCCTTCCTCCAGACTTTACTGGGGCTCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR TCA 90 bp | CTCCCTCCCATCCTGAGCCCAGCTCAGCACGGATTCTACAGGAAGGAAGGCTGGTGTGCTGGTGCCCAGTaGGGTTCAAAAAGAAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: LPPILSPAQHGFYRKEGWCAGAQ*GSKRKY Trigger: GTACTTTCTTTTTGAACCTCACTGGGCACCAGCACA...CCAGCCTTCCTTCCTGTAGAATCCGTGCTGAGCTGGGCTCAGGATGGGAGGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR TCA 90 bp | ATCCTCCCTCCCATCCTGAGCCCAGCTCAGCACGGATTCTACAGGAAGGAAGGCTGTGCTGGTGCCCAGTaGGGTTCAAAAAGAAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: ILPPILSPAQHGFYRKEGCAGAQ*GSKRKY Trigger: GTACTTTCTTTTTGAACCTCACTGGGCACCAGCACA...GCCTTCCTTCCTGTAGAATCCGTGCTGAGCTGGGCTCAGGATGGGAGGGAGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR TCA 90 bp | CTTAGCAAATCAAAGGCTCTTAATCCAGGTCTGGGAGCCCCTCACAGGAGCTCAGTTGCAGTCTGGTGGTaGGAGGCCTCCTGGTCAATG | + |
|
Preference number: 2 (lower is better) Translates to: LSKSKALNPGLGAPHRSSVAVWW*EASWSM Trigger: CATTGACCAGGAGGCCTCTCACCACCAGACTGCAAC...TGAGCTCCTGTGAGGGGCTCCCAGACCTGGATTAAGAGCCTTTGATTTGCTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR TCA 90 bp | GCCAGAGCCCCAGTAAAGTCTGGAGGAAGGAGGCTCAGCCTCGAACTTGTTCCTCATCTTCGCAGCCCCTaGACCAAGGGAAGATGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: ARAPVKSGGRRLSLELVPHLRSP*TKGRCL Trigger: TAAACATCTTCCCTTGGTTCAGGGGCTGCGAAGATG...AGGAACAAGTTCGAGGCTGAGCCTCCTTCCTCCAGACTTTACTGGGGCTCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR TCA 90 bp | GCAGGTGTAAACCAGAGGACAACTTATAGAATTGGCTCTCTCCTTCACTGTGGGGCAAGCAGAGGCACGTaGCCATCCTCCCTCCCATCC | + |
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Preference number: 2 (lower is better) Translates to: AGVNQRTTYRIGSLLHCGASRGT*PSSLPS Trigger: GGATGGGAGGGAGGATGGTCACGTGCCTCTGCTTGC...CCCACAGTGAAGGAGAGAGCCAATTCTATAAGTTGTCCTCTGGTTTACACCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR TCA 90 bp | GTAAACCAGAGGACAACTTATAGAATTGGCTCTCTCCTTCACTGTGGGTCCCAGGCAAGCAGAGGCACGTaGCCATCCTCCCTCCCATCC | + |
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Preference number: 2 (lower is better) Translates to: VNQRTTYRIGSLLHCGSQASRGT*PSSLPS Trigger: GGATGGGAGGGAGGATGGTCACGTGCCTCTGCTTGC...CTGGGACCCACAGTGAAGGAGAGAGCCAATTCTATAAGTTGTCCTCTGGTTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR CCA 90 bp | CCTAGCAGCAAAGCTGAAGTGGAGGCTGGGTGGCACACATGGGAGACCAAAGAGCTCCATGAGGGATGCTaGGAAATGAACTCTGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: PSSKAEVEAGWHTWETKELHEGC*EMNSGP Trigger: AGGACCAGAGTTCATTTCCCAGCATCCCTCATGGAG...CTCTTTGGTCTCCCATGTGTGCCACCCAGCCTCCACTTCAGCTTTGCTGCTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR TCA 90 bp | GATTCTACAGGAAGGAAGGCTGGGTCGCCGCTACCTCACGTTCTATGCACTTATTTAGACACTATGGGCTaGGCAGTGTGCTGGTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: DSTGRKAGSPLPHVLCTYLDTMG*AVCWCP Trigger: TGGGCACCAGCACACTGCTCAGCCCATAGTGTCTAA...ATAAGTGCATAGAACGTGAGGTAGCGGCGACCCAGCCTTCCTTCCTGTAGAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR TCA 90 bp | CTTAAGAGGGAGAATGTTCTAGGTGTGGCTTCACAGAGACAGTGGTTACGGGCAGTTGCAGTCTGGTGGTaGGAGGCCTCCTGGTCAATG | + |
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Preference number: 2 (lower is better) Translates to: LKRENVLGVASQRQWLRAVAVWW*EASWSM Trigger: CATTGACCAGGAGGCCTCTCACCACCAGACTGCAAC...TGCCCGTAACCACTGTCTCTGTGAAGCCACACCTAGAACATTCTCCCTCTTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR TCA 90 bp | TCTGCTAGGCAGCTAAGCATCATGGTCAGAGACACAGGTATCATCCTGAGACCTGTTGCAGTCTGGTGGTaGGAGGCCTCCTGGTCAATG | + |
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Preference number: 2 (lower is better) Translates to: SARQLSIMVRDTGIILRPVAVWW*EASWSM Trigger: CATTGACCAGGAGGCCTCTCACCACCAGACTGCAAC...AGGTCTCAGGATGATACCTGTGTCTCTGACCATGATGCTTAGCTGCCTAGCAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR GCA 90 bp | CCTAGCAGCAAAGCTGAAGTGGAGGCTGGGTGGCACACATGGGAGACCAAAGAGGTGGCTGCCTTCAAATaGAGAGATCCATGTGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: PSSKAEVEAGWHTWETKEVAAFK*RDPCVS Trigger: AGAGACACATGGATCTCTGCATTTGAAGGCAGCCAC...CTCTTTGGTCTCCCATGTGTGCCACCCAGCCTCCACTTCAGCTTTGCTGCTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR TCA 90 bp | CAGCACCTCTACCAGCTGAATCATCTTGCCTGCCTTAAAGTGAATTTCCTTAAGGCAAGCAGAGGCACGTaGCCATCCTCCCTCCCATCC | + |
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Preference number: 2 (lower is better) Translates to: QHLYQLNHLACLKVNFLKASRGT*PSSLPS Trigger: GGATGGGAGGGAGGATGGTCACGTGCCTCTGCTTGC...CTTAAGGAAATTCACTTTAAGGCAGGCAAGATGATTCAGCTGGTAGAGGTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR TCA 90 bp | GTAAACCAGAGGACAACTTATAGAATTGGCTCTCTCCTTCACTGTGGGTCCCAGTTAGACACTATGGGCTaGGCAGTGTGCTGGTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: VNQRTTYRIGSLLHCGSQLDTMG*AVCWCP Trigger: TGGGCACCAGCACACTGCTCAGCCCATAGTGTCTAA...CTGGGACCCACAGTGAAGGAGAGAGCCAATTCTATAAGTTGTCCTCTGGTTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGGTGTAAACCAGAGGACAACTTATAGAATTGGCTCTCTCCTTCACTGTGGGGAAGTGGAGGCTGGGTaGCACACATGGGAGACCAAA | + |
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Preference number: 2 (lower is better) Translates to: AGVNQRTTYRIGSLLHCGEVEAG*HTWETK Trigger: TTTGGTCTCCCATGTGTGCCACCCAGCCTCCACTTC...CCCACAGTGAAGGAGAGAGCCAATTCTATAAGTTGTCCTCTGGTTTACACCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCACCTCTACCAGCTGAATCATCTTGCCTGCCTTAAAGTGAATTTCCTTAAGGAGATGGACCAGGGTTaGAGTCTGGTGGTGAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: QHLYQLNHLACLKVNFLKEMDQG*SLVVRG Trigger: GCCTCTCACCACCAGACTGCAACCCTGGTCCATCTC...CTTAAGGAAATTCACTTTAAGGCAGGCAAGATGATTCAGCTGGTAGAGGTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR GCA 90 bp | CTTAGCAAATCAAAGGCTCTTAATCCAGGTCTGGGAGCCCCTCACAGGAGCTCAGTGGCTGCCTTCAAATaGAGAGATCCATGTGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: LSKSKALNPGLGAPHRSSVAAFK*RDPCVS Trigger: AGAGACACATGGATCTCTGCATTTGAAGGCAGCCAC...TGAGCTCCTGTGAGGGGCTCCCAGACCTGGATTAAGAGCCTTTGATTTGCTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR TCA 90 bp | CTTAAGAGGGAGAATGTTCTAGGTGTGGCTTCACAGAGACAGTGGTTACGGGCATGTGCTGGTGCCCAGTaGGGTTCAAAAAGAAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: LKRENVLGVASQRQWLRACAGAQ*GSKRKY Trigger: GTACTTTCTTTTTGAACCTCACTGGGCACCAGCACA...TGCCCGTAACCACTGTCTCTGTGAAGCCACACCTAGAACATTCTCCCTCTTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR TCA 90 bp | CTTAAGAGGGAGAATGTTCTAGGTGTGGCTTCACAGAGACAGTGGTTACGGGCAAGTTATGAGCCTCCATaGGGGATGCTGGGAAATGAA | + |
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Preference number: 2 (lower is better) Translates to: LKRENVLGVASQRQWLRASYEPP*GMLGNE Trigger: TTCATTTCCCAGCATCCCTCATGGAGGCTCATAACT...TGCCCGTAACCACTGTCTCTGTGAAGCCACACCTAGAACATTCTCCCTCTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR GCA 90 bp | CATCTTGCCTGCCTTAAAGTGAATTTCCTTAAGAGGGAGAATGTTCTAGGTGTGGAGATGGACCAGGGTTaGAGTCTGGTGGTGAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: HLACLKVNFLKRENVLGVEMDQG*SLVVRG Trigger: GCCTCTCACCACCAGACTGCAACCCTGGTCCATCTC...CACACCTAGAACATTCTCCCTCTTAAGGAAATTCACTTTAAGGCAGGCAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGGTGTAAACCAGAGGACAACTTATAGAATTGGCTCTCTCCTTCACTGTGGGCTCCATGAGGGATGCTaGGAAATGAACTCTGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: AGVNQRTTYRIGSLLHCGLHEGC*EMNSGP Trigger: AGGACCAGAGTTCATTTCCCAGCATCCCTCATGGAG...CCCACAGTGAAGGAGAGAGCCAATTCTATAAGTTGTCCTCTGGTTTACACCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR CCA 90 bp | CATCTTGCCTGCCTTAAAGTGAATTTCCTTAAGAGGGAGAATGTTCTAGGTGTGGGAGCTCACAGGGTGTaGAAGCAAGCAGAGGCACGT | + |
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Preference number: 2 (lower is better) Translates to: HLACLKVNFLKRENVLGVGAHRV*KQAEAR Trigger: ACGTGCCTCTGCTTGCTTCCACACCCTGTGAGCTCC...CACACCTAGAACATTCTCCCTCTTAAGGAAATTCACTTTAAGGCAGGCAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR CCA 90 bp | CATCTTGCCTGCCTTAAAGTGAATTTCCTTAAGAGGGAGAATGTTCTAGGTGTGCTCTTAATCCAGGTCTaGGAGCCCCTCACAGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: HLACLKVNFLKRENVLGVLLIQV*EPLTGA Trigger: AGCTCCTGTGAGGGGCTCCCAGACCTGGATTAAGAG...CACACCTAGAACATTCTCCCTCTTAAGGAAATTCACTTTAAGGCAGGCAAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR TCA 90 bp | GTGCATTTTAAGATTGTAGCTGTGGCTGCCTTCAAATGCAGAGATCCATGTGTCCATCTTCGCAGCCCCTaGACCAAGGGAAGATGTTTA | + |
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Preference number: 2 (lower is better) Translates to: VHFKIVAVAAFKCRDPCVHLRSP*TKGRCL Trigger: TAAACATCTTCCCTTGGTTCAGGGGCTGCGAAGATG...GACACATGGATCTCTGCATTTGAAGGCAGCCACAGCTACAATCTTAAAATGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR TCA 90 bp | CTTAGCAAATCAAAGGCTCTTAATCCAGGTCTGGGAGCCCCTCACAGGAGCTCATCTGAGACAAATCTCTaGATGTGGCCAAAACTGATT | + |
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Preference number: 2 (lower is better) Translates to: LSKSKALNPGLGAPHRSSSETNL*MWPKLI Trigger: AATCAGTTTTGGCCACATTCAGAGATTTGTCTCAGA...TGAGCTCCTGTGAGGGGCTCCCAGACCTGGATTAAGAGCCTTTGATTTGCTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR TCA 90 bp | GATTCTACAGGAAGGAAGGCTGGGTCGCCGCTACCTCACGTTCTATGCACTTATTCTGAGACAAATCTCTaGATGTGGCCAAAACTGATT | + |
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Preference number: 2 (lower is better) Translates to: DSTGRKAGSPLPHVLCTYSETNL*MWPKLI Trigger: AATCAGTTTTGGCCACATTCAGAGATTTGTCTCAGA...ATAAGTGCATAGAACGTGAGGTAGCGGCGACCCAGCCTTCCTTCCTGTAGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| 3UTR-3UTR TCA 90 bp | CAGCACCTCTACCAGCTGAATCATCTTGCCTGCCTTAAAGTGAATTTCCTTAAGAGTTATGAGCCTCCATaGGGGATGCTGGGAAATGAA | + |
|
Preference number: 2 (lower is better) Translates to: QHLYQLNHLACLKVNFLKSYEPP*GMLGNE Trigger: TTCATTTCCCAGCATCCCTCATGGAGGCTCATAACT...CTTAAGGAAATTCACTTTAAGGCAGGCAAGATGATTCAGCTGGTAGAGGTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| 3UTR-3UTR TCA 90 bp | GGAAGGCTGGGTCGCCGCTACCTCACGTTCTATGCACTTATGATTTATTATTATTCTGAGACAAATCTCTaGATGTGGCCAAAACTGATT | + |
|
Preference number: 2 (lower is better) Translates to: GRLGRRYLTFYALMIYYYSETNL*MWPKLI Trigger: AATCAGTTTTGGCCACATTCAGAGATTTGTCTCAGA...ATAATAATAAATCATAAGTGCATAGAACGTGAGGTAGCGGCGACCCAGCCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| 3UTR CCA 72 bp | CAGGTCTGGGAGCCCCTCACAGGAGCTCACAGGGTGTaGAAGCAAGCAGAGGCACGTGACCATCCTCCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: QVWEPLTGAHRV*KQAEARDHPPS Trigger: GGAGGGAGGATGGTCACGTGCCTCTGCTTGCTTCCACACCCTGTGAGCTCCTGTGAGGGGCTCCCAGACCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTGGTTACGGGCAGCCTAGCAGCAAAGCTGAAGTGGAGGCTGGGTGGCACACAAGAGATGGACCAGGGTaGCAGTCTGGTGGTGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SGYGQPSSKAEVEAGWHTRDGPG*QSGGER Trigger: CCTCTCACCACCAGACTGCAACCCTGGTCCATCTCT...TGTGTGCCACCCAGCCTCCACTTCAGCTTTGCTGCTAGGCTGCCCGTAACCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| 3UTR-3UTR CAA 90 bp | ATCCTCCCTCCCATCCTGAGCCCAGCTCAGCACGGATTCTACAGGAAGGAAGGCAGAGATGGACCAGGGTaGCAGTCTGGTGGTGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ILPPILSPAQHGFYRKEGRDGPG*QSGGER Trigger: CCTCTCACCACCAGACTGCAACCCTGGTCCATCTCT...GCCTTCCTTCCTGTAGAATCCGTGCTGAGCTGGGCTCAGGATGGGAGGGAGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGCACGGATTCTACAGGAAGGAAGGCTGGGTCGCCGCTACCTCACGTTCTAAGAGATGGACCAGGGTaGCAGTCTGGTGGTGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LSTDSTGRKAGSPLPHVLRDGPG*QSGGER Trigger: CCTCTCACCACCAGACTGCAACCCTGGTCCATCTCT...TAGAACGTGAGGTAGCGGCGACCCAGCCTTCCTTCCTGTAGAATCCGTGCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| 3UTR CCA 72 bp | ACAGTGGTTACGGGCAGCCTAGCAGCAAAGCTGAAGTaGAGGCTGGGTGGCACACATGGGAGACCAAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: TVVTGSLAAKLK*RLGGTHGRPKR Trigger: TCTCTTTGGTCTCCCATGTGTGCCACCCAGCCTCCACTTCAGCTTTGCTGCTAGGCTGCCCGTAACCACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGGAGCCCCTCACAGGAGCTCACAGGGTGTGGAAGCAAGCAGAGGCACGTGACGTAGATCAGACTAGATaGAACATAGAAATCCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: WEPLTGAHRVWKQAEARDVDQTR*NIEIHL Trigger: CAGGTGGATTTCTATGTTCAATCTAGTCTGATCTAC...GTCACGTGCCTCTGCTTGCTTCCACACCCTGTGAGCTCCTGTGAGGGGCTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| 3UTR CCA 72 bp | TGTTCCTTAGCAAATCAAAGGCTCTTAATCCAGGTCTaGGAGCCCCTCACAGGAGCTCACAGGGTGTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: CSLANQRLLIQV*EPLTGAHRVWK Trigger: CTTCCACACCCTGTGAGCTCCTGTGAGGGGCTCCCAGACCTGGATTAAGAGCCTTTGATTTGCTAAGGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| 3UTR-3UTR CAA 90 bp | CATCCTCCCTCCCATCCTGAGCCCAGCTCAGCACGGATTCTACAGGAAGGAAGGGTAGATCAGACTAGATaGAACATAGAAATCCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: HPPSHPEPSSARILQEGRVDQTR*NIEIHL Trigger: CAGGTGGATTTCTATGTTCAATCTAGTCTGATCTAC...CCTTCCTTCCTGTAGAATCCGTGCTGAGCTGGGCTCAGGATGGGAGGGAGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| 3UTR CCA 72 bp | GGGAATTCTATGAAGTCTAAGCAGGTCGCAAGCTTCTaGCAATTTCCCCCAGCACTGGGATCACAGATTTGC | + |
|
Preference number: 3 (lower is better) Translates to: GNSMKSKQVASF*QFPPALGSQIC Trigger: GCAAATCTGTGATCCCAGTGCTGGGGGAAATTGCCAGAAGCTTGCGACCTGCTTAGACTTCATAGAATTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| 3UTR-3UTR CAA 90 bp | CATCTTGCCTGCCTTAAAGTGAATTTCCTTAAGAGGGAGAATGTTCTAGGTGTGCTTTCCCTAGCCTCTTaGGTGTGTGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: HLACLKVNFLKRENVLGVLSLAS*VCVCVC Trigger: ACACACACACACACACACCAAAGAGGCTAGGGAAAG...CACACCTAGAACATTCTCCCTCTTAAGGAAATTCACTTTAAGGCAGGCAAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| 3UTR GCA 72 bp | GGAAGCCAGCACCTCTACCAGCTGAATCATCTTGCCTaGCTTAAAGTGAATTTCCTTAAGAGGGAGAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: GSQHLYQLNHLA*LKVNFLKRENV Trigger: AACATTCTCCCTCTTAAGGAAATTCACTTTAAGGCAGGCAAGATGATTCAGCTGGTAGAGGTGCTGGCTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGCGCGCGTGCGCGCACTTGTAGAGGCCAGAGCCCCAGTAAAGTCTGGAAGGGCGTCCAGGTCTTaGGGCTCCTGCCCACTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VCARVRALVEARAPVKSGRASRS*GSCPLR Trigger: CCGCAGTGGGCAGGAGCCCCAAGACCTGGACGCCCT...TCCAGACTTTACTGGGGCTCTGGCCTCTACAAGTGCGCGCACGCGCGCACACAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CCA 90 bp | AGGGCAGCACTAGAGATGGACCAGGGTTGCAGTCTGGTGGTGAGAGGCCTCCTGAGGGCGTCCAGGTCTTaGGGCTCCTGCCCACTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RAALEMDQGCSLVVRGLLRASRS*GSCPLR Trigger: CCGCAGTGGGCAGGAGCCCCAAGACCTGGACGCCCT...CAGGAGGCCTCTCACCACCAGACTGCAACCCTGGTCCATCTCTAGTGCTGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CCA 90 bp | CTCCCTCCCATCCTGAGCCCAGCTCAGCACGGATTCTACAGGAAGGAAGGCTGGAGGGCGTCCAGGTCTTaGGGCTCCTGCCCACTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LPPILSPAQHGFYRKEGWRASRS*GSCPLR Trigger: CCGCAGTGGGCAGGAGCCCCAAGACCTGGACGCCCT...CCAGCCTTCCTTCCTGTAGAATCCGTGCTGAGCTGGGCTCAGGATGGGAGGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR TCA 90 bp | CATCCTCCCTCCCATCCTGAGCCCAGCTCAGCACGGATTCTACAGGAAGGAAGGCACAGGTCACGCAGGTaGAGCAGGGTGGGTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HPPSHPEPSSARILQEGRHRSRR*SRVGGR Trigger: CCTTCCACCCACCCTGCTTCACCTGCGTGACCTGTG...CCTTCCTTCCTGTAGAATCCGTGCTGAGCTGGGCTCAGGATGGGAGGGAGGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR GCA 90 bp | AGTGGTTACGGGCAGCCTAGCAGCAAAGCTGAAGTGGAGGCTGGGTGGCACACAGGGGGTGGGGGCAGGTaGAGTTGCTCCAAGTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SGYGQPSSKAEVEAGWHTGGGGR*SCSKSE Trigger: TTCCGACTTGGAGCAACTGCACCTGCCCCCACCCCC...TGTGTGCCACCCAGCCTCCACTTCAGCTTTGCTGCTAGGCTGCCCGTAACCACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR TCA 90 bp | CCTAGCAGCAAAGCTGAAGTGGAGGCTGGGTGGCACACATGGGAGACCAAAGAGCACAGGTCACGCAGGTaGAGCAGGGTGGGTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSSKAEVEAGWHTWETKEHRSRR*SRVGGR Trigger: CCTTCCACCCACCCTGCTTCACCTGCGTGACCTGTG...CTCTTTGGTCTCCCATGTGTGCCACCCAGCCTCCACTTCAGCTTTGCTGCTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CCA 90 bp | ATCCTCCCTCCCATCCTGAGCCCAGCTCAGCACGGATTCTACAGGAAGGAAGGCGGCTACATCTCGGCGTaGCGGTGCCAGGGTGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILPPILSPAQHGFYRKEGGYISA*RCQGDE Trigger: TTCATCACCCTGGCACCGCCACGCCGAGATGTAGCC...GCCTTCCTTCCTGTAGAATCCGTGCTGAGCTGGGCTCAGGATGGGAGGGAGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CCA 90 bp | TGGAAGCAAGCAGAGGCACGTGACCATCCTCCCTCCCATCCTGAGCCCAGCTCAAGGAGGCTCCTCTTCTaGGAGAGGCAGGTAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WKQAEARDHPPSHPEPSSRRLLF*ERQVGR Trigger: TCTGCCTACCTGCCTCTCCCAGAAGAGGAGCCTCCT...TGAGCTGGGCTCAGGATGGGAGGGAGGATGGTCACGTGCCTCTGCTTGCTTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CCA 90 bp | TGGGAGCCCCTCACAGGAGCTCACAGGGTGTGGAAGCAAGCAGAGGCACGTGACGAGGTGGTCATTCAGTaGGTAGCAGCCTTGGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: WEPLTGAHRVWKQAEARDEVVIQ*VAALVG Trigger: ACCGACCAAGGCTGCTACCCACTGAATGACCACCTC...GTCACGTGCCTCTGCTTGCTTCCACACCCTGTGAGCTCCTGTGAGGGGCTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR TCA 90 bp | CTCCCTCCCATCCTGAGCCCAGCTCAGCACGGATTCTACAGGAAGGAAGGCTGGCCTCCATTGGAGAGCTaGGGTGTGACTCCAGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPPILSPAQHGFYRKEGWPPLES*GVTPES Trigger: ACTCTCTGGAGTCACACCTCAGCTCTCCAATGGAGG...CCAGCCTTCCTTCCTGTAGAATCCGTGCTGAGCTGGGCTCAGGATGGGAGGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR TCA 90 bp | CTCCCTCCCATCCTGAGCCCAGCTCAGCACGGATTCTACAGGAAGGAAGGCTGGCTCTCTCTGGAAGTGTaGCAGGCTCTTCTGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPPILSPAQHGFYRKEGWLSLEV*QALLEE Trigger: CTCCTCCAGAAGAGCCTGTCACACTTCCAGAGAGAG...CCAGCCTTCCTTCCTGTAGAATCCGTGCTGAGCTGGGCTCAGGATGGGAGGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR GCA 90 bp | GATTCTACAGGAAGGAAGGCTGGGTCGCCGCTACCTCACGTTCTATGCACTTATAGGTCTTGGGGCTCCTaGCCACTGCGGCCCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DSTGRKAGSPLPHVLCTYRSWGS*PLRPQV Trigger: CACCTGGGGCCGCAGTGGGCAGGAGCCCCAAGACCT...ATAAGTGCATAGAACGTGAGGTAGCGGCGACCCAGCCTTCCTTCCTGTAGAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CCA 90 bp | ACAGTGGTTACGGGCAGCCTAGCAGCAAAGCTGAAGTGGAGGCTGGGTGGCACAGCTTCACAAGCTGCCTaGCCCACTTCCTCACTCACG | + |
|
Preference number: 4 (lower is better) Translates to: TVVTGSLAAKLKWRLGGTASQAA*PTSSLT Trigger: CGTGAGTGAGGAAGTGGGCCAGGCAGCTTGTGAAGC...TGTGCCACCCAGCCTCCACTTCAGCTTTGCTGCTAGGCTGCCCGTAACCACTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CCA 90 bp | AGTGGTTACGGGCAGCCTAGCAGCAAAGCTGAAGTGGAGGCTGGGTGGCACACAAGGAGGCTCCTCTTCTaGGAGAGGCAGGTAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SGYGQPSSKAEVEAGWHTRRLLF*ERQVGR Trigger: TCTGCCTACCTGCCTCTCCCAGAAGAGGAGCCTCCT...TGTGTGCCACCCAGCCTCCACTTCAGCTTTGCTGCTAGGCTGCCCGTAACCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CCA 90 bp | CTCCCTCCCATCCTGAGCCCAGCTCAGCACGGATTCTACAGGAAGGAAGGCTGGGAGGTGGTCATTCAGTaGGTAGCAGCCTTGGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPPILSPAQHGFYRKEGWEVVIQ*VAALVG Trigger: ACCGACCAAGGCTGCTACCCACTGAATGACCACCTC...CCAGCCTTCCTTCCTGTAGAATCCGTGCTGAGCTGGGCTCAGGATGGGAGGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR TCA 90 bp | ACAGTGGTTACGGGCAGCCTAGCAGCAAAGCTGAAGTGGAGGCTGGGTGGCACATGGAGAGCTGAGGTGTaGCTCCAGAGAGTGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TVVTGSLAAKLKWRLGGTWRAEV*LQRVRH Trigger: ATGCCTCACTCTCTGGAGTCACACCTCAGCTCTCCA...TGTGCCACCCAGCCTCCACTTCAGCTTTGCTGCTAGGCTGCCCGTAACCACTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR TCA 90 bp | ACAGTGGTTACGGGCAGCCTAGCAGCAAAGCTGAAGTGGAGGCTGGGTGGCACACTCTCTCTGGAAGTGTaGCAGGCTCTTCTGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TVVTGSLAAKLKWRLGGTLSLEV*QALLEE Trigger: CTCCTCCAGAAGAGCCTGTCACACTTCCAGAGAGAG...TGTGCCACCCAGCCTCCACTTCAGCTTTGCTGCTAGGCTGCCCGTAACCACTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR TCA 90 bp | TGGAAGCAAGCAGAGGCACGTGACCATCCTCCCTCCCATCCTGAGCCCAGCTCAGGAGACACAGGCTTGTaGCAGAAACCACAGACATCC | + |
|
Preference number: 4 (lower is better) Translates to: WKQAEARDHPPSHPEPSSGDTGL*QKPQTS Trigger: GGATGTCTGTGGTTTCTGTCACAAGCCTGTGTCTCC...TGAGCTGGGCTCAGGATGGGAGGGAGGATGGTCACGTGCCTCTGCTTGCTTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR GCA 90 bp | AGTGGTTACGGGCAGCCTAGCAGCAAAGCTGAAGTGGAGGCTGGGTGGCACACATCTGGCTTCACAAGCTaGCTGGCCCACTTCCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SGYGQPSSKAEVEAGWHTSGFTS*LAHFLT Trigger: AGTGAGGAAGTGGGCCAGGCAGCTTGTGAAGCCAGA...TGTGTGCCACCCAGCCTCCACTTCAGCTTTGCTGCTAGGCTGCCCGTAACCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR GCA 90 bp | TCTGCTAGGCAGCTAAGCATCATGGTCAGAGACACAGGTATCATCCTGAGACCTAGGTCTTGGGGCTCCTaGCCACTGCGGCCCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SARQLSIMVRDTGIILRPRSWGS*PLRPQV Trigger: CACCTGGGGCCGCAGTGGGCAGGAGCCCCAAGACCT...AGGTCTCAGGATGATACCTGTGTCTCTGACCATGATGCTTAGCTGCCTAGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR TCA 90 bp | CCTAGCAGCAAAGCTGAAGTGGAGGCTGGGTGGCACACATGGGAGACCAAAGAGTGGAGAGCTGAGGTGTaGCTCCAGAGAGTGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSSKAEVEAGWHTWETKEWRAEV*LQRVRH Trigger: ATGCCTCACTCTCTGGAGTCACACCTCAGCTCTCCA...CTCTTTGGTCTCCCATGTGTGCCACCCAGCCTCCACTTCAGCTTTGCTGCTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR TCA 90 bp | AGTGGTTACGGGCAGCCTAGCAGCAAAGCTGAAGTGGAGGCTGGGTGGCACACAGGAGACACAGGCTTGTaGCAGAAACCACAGACATCC | + |
|
Preference number: 4 (lower is better) Translates to: SGYGQPSSKAEVEAGWHTGDTGL*QKPQTS Trigger: GGATGTCTGTGGTTTCTGTCACAAGCCTGTGTCTCC...TGTGTGCCACCCAGCCTCCACTTCAGCTTTGCTGCTAGGCTGCCCGTAACCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR GCA 90 bp | GCCAGAGCCCCAGTAAAGTCTGGAGGAAGGAGGCTCAGCCTCGAACTTGTTCCTTCTGGCTTCACAAGCTaGCTGGCCCACTTCCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: ARAPVKSGGRRLSLELVPSGFTS*LAHFLT Trigger: AGTGAGGAAGTGGGCCAGGCAGCTTGTGAAGCCAGA...AGGAACAAGTTCGAGGCTGAGCCTCCTTCCTCCAGACTTTACTGGGGCTCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR GCA 90 bp | CTTAGCAAATCAAAGGCTCTTAATCCAGGTCTGGGAGCCCCTCACAGGAGCTCAGGGGGTGGGGGCAGGTaGAGTTGCTCCAAGTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSKSKALNPGLGAPHRSSGGGGR*SCSKSE Trigger: TTCCGACTTGGAGCAACTGCACCTGCCCCCACCCCC...TGAGCTCCTGTGAGGGGCTCCCAGACCTGGATTAAGAGCCTTTGATTTGCTAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CCA 90 bp | GCCAGAGCCCCAGTAAAGTCTGGAGGAAGGAGGCTCAGCCTCGAACTTGTTCCTTGTGACAGGCTCTTCTaGAGGAGGAGGAAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ARAPVKSGGRRLSLELVPCDRLF*RRRKLL Trigger: GAGGAGCTTCCTCCTCCTCCAGAAGAGCCTGTCACA...AGGAACAAGTTCGAGGCTGAGCCTCCTTCCTCCAGACTTTACTGGGGCTCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CCA 90 bp | CCTAGCAGCAAAGCTGAAGTGGAGGCTGGGTGGCACACATGGGAGACCAAAGAGGAGGTGGTCATTCAGTaGGTAGCAGCCTTGGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSSKAEVEAGWHTWETKEEVVIQ*VAALVG Trigger: ACCGACCAAGGCTGCTACCCACTGAATGACCACCTC...CTCTTTGGTCTCCCATGTGTGCCACCCAGCCTCCACTTCAGCTTTGCTGCTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR GCA 90 bp | CTCAGCACGGATTCTACAGGAAGGAAGGCTGGGTCGCCGCTACCTCACGTTCTAGATTCTCGCAGATGCTaGACACGGGGGCAAATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSTDSTGRKAGSPLPHVLDSRRC*TRGQIS Trigger: GGAAATTTGCCCCCGTGTGCAGCATCTGCGAGAATC...TAGAACGTGAGGTAGCGGCGACCCAGCCTTCCTTCCTGTAGAATCCGTGCTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR GCA 90 bp | ACAGTGGTTACGGGCAGCCTAGCAGCAAAGCTGAAGTGGAGGCTGGGTGGCACATCAGGTGACAGGGCTTaGAGAAGAGGTGGTCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: TVVTGSLAAKLKWRLGGTSGDRA*RRGGHS Trigger: TGAATGACCACCTCTTCTGCAAGCCCTGTCACCTGA...TGTGCCACCCAGCCTCCACTTCAGCTTTGCTGCTAGGCTGCCCGTAACCACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CCA 90 bp | GATTCTACAGGAAGGAAGGCTGGGTCGCCGCTACCTCACGTTCTATGCACTTATCCCCAGGTGTCTTTGTaGGAAGCATCTCCCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DSTGRKAGSPLPHVLCTYPQVSL*EASPRA Trigger: GGCCCTGGGAGATGCTTCCCACAAAGACACCTGGGG...ATAAGTGCATAGAACGTGAGGTAGCGGCGACCCAGCCTTCCTTCCTGTAGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR GCA 90 bp | GCAGGTGTAAACCAGAGGACAACTTATAGAATTGGCTCTCTCCTTCACTGTGGGGGGGGTGGGGGCAGGTaGAGTTGCTCCAAGTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AGVNQRTTYRIGSLLHCGGGGGR*SCSKSE Trigger: TTCCGACTTGGAGCAACTGCACCTGCCCCCACCCCC...CCCACAGTGAAGGAGAGAGCCAATTCTATAAGTTGTCCTCTGGTTTACACCTGC 54% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR GCA 90 bp | CTCAGCACGGATTCTACAGGAAGGAAGGCTGGGTCGCCGCTACCTCACGTTCTATCAGGTGACAGGGCTTaGAGAAGAGGTGGTCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSTDSTGRKAGSPLPHVLSGDRA*RRGGHS Trigger: TGAATGACCACCTCTTCTGCAAGCCCTGTCACCTGA...TAGAACGTGAGGTAGCGGCGACCCAGCCTTCCTTCCTGTAGAATCCGTGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR TCA 90 bp | CTTAGCAAATCAAAGGCTCTTAATCCAGGTCTGGGAGCCCCTCACAGGAGCTCACCTCCATTGGAGAGCTaGGGTGTGACTCCAGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSKSKALNPGLGAPHRSSPPLES*GVTPES Trigger: ACTCTCTGGAGTCACACCTCAGCTCTCCAATGGAGG...TGAGCTCCTGTGAGGGGCTCCCAGACCTGGATTAAGAGCCTTTGATTTGCTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CCA 90 bp | TCTGCTAGGCAGCTAAGCATCATGGTCAGAGACACAGGTATCATCCTGAGACCTGCTTCACAAGCTGCCTaGCCCACTTCCTCACTCACG | + |
|
Preference number: 4 (lower is better) Translates to: SARQLSIMVRDTGIILRPASQAA*PTSSLT Trigger: CGTGAGTGAGGAAGTGGGCCAGGCAGCTTGTGAAGC...AGGTCTCAGGATGATACCTGTGTCTCTGACCATGATGCTTAGCTGCCTAGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CCA 90 bp | GTAAACCAGAGGACAACTTATAGAATTGGCTCTCTCCTTCACTGTGGGTCCCAGCCCCAGGTGTCTTTGTaGGAAGCATCTCCCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VNQRTTYRIGSLLHCGSQPQVSL*EASPRA Trigger: GGCCCTGGGAGATGCTTCCCACAAAGACACCTGGGG...CTGGGACCCACAGTGAAGGAGAGAGCCAATTCTATAAGTTGTCCTCTGGTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CCA 90 bp | CTTAAGAGGGAGAATGTTCTAGGTGTGGCTTCACAGAGACAGTGGTTACGGGCAGCCACACAGTACACCTaGTTCTGGCTGTCCAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LKRENVLGVASQRQWLRAATQYT*FWLSSA Trigger: TGCGCTGGACAGCCAGAACCAGGTGTACTGTGTGGC...TGCCCGTAACCACTGTCTCTGTGAAGCCACACCTAGAACATTCTCCCTCTTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR TCA 90 bp | CTTAAGAGGGAGAATGTTCTAGGTGTGGCTTCACAGAGACAGTGGTTACGGGCATGGAGAGCTGAGGTGTaGCTCCAGAGAGTGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LKRENVLGVASQRQWLRAWRAEV*LQRVRH Trigger: ATGCCTCACTCTCTGGAGTCACACCTCAGCTCTCCA...TGCCCGTAACCACTGTCTCTGTGAAGCCACACCTAGAACATTCTCCCTCTTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR GCA 90 bp | GCAGGTGTAAACCAGAGGACAACTTATAGAATTGGCTCTCTCCTTCACTGTGGGTCTGGCTTCACAAGCTaGCTGGCCCACTTCCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: AGVNQRTTYRIGSLLHCGSGFTS*LAHFLT Trigger: AGTGAGGAAGTGGGCCAGGCAGCTTGTGAAGCCAGA...CCCACAGTGAAGGAGAGAGCCAATTCTATAAGTTGTCCTCTGGTTTACACCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR GCA 90 bp | CTTAAGAGGGAGAATGTTCTAGGTGTGGCTTCACAGAGACAGTGGTTACGGGCATGGGATTCTCGCAGATaGTGCACACGGGGGCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: LKRENVLGVASQRQWLRAWDSRR*CTRGQI Trigger: AATTTGCCCCCGTGTGCAGCATCTGCGAGAATCCCA...TGCCCGTAACCACTGTCTCTGTGAAGCCACACCTAGAACATTCTCCCTCTTAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR GCA 90 bp | TCTGCTAGGCAGCTAAGCATCATGGTCAGAGACACAGGTATCATCCTGAGACCTTGGGATTCTCGCAGATaGTGCACACGGGGGCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: SARQLSIMVRDTGIILRPWDSRR*CTRGQI Trigger: AATTTGCCCCCGTGTGCAGCATCTGCGAGAATCCCA...AGGTCTCAGGATGATACCTGTGTCTCTGACCATGATGCTTAGCTGCCTAGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR GCA 90 bp | CTTAGCAAATCAAAGGCTCTTAATCCAGGTCTGGGAGCCCCTCACAGGAGCTCATCAGGTGACAGGGCTTaGAGAAGAGGTGGTCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSKSKALNPGLGAPHRSSSGDRA*RRGGHS Trigger: TGAATGACCACCTCTTCTGCAAGCCCTGTCACCTGA...TGAGCTCCTGTGAGGGGCTCCCAGACCTGGATTAAGAGCCTTTGATTTGCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CCA 90 bp | CAGCACCTCTACCAGCTGAATCATCTTGCCTGCCTTAAAGTGAATTTCCTTAAGGGCTACATCTCGGCGTaGCGGTGCCAGGGTGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: QHLYQLNHLACLKVNFLKGYISA*RCQGDE Trigger: TTCATCACCCTGGCACCGCCACGCCGAGATGTAGCC...CTTAAGGAAATTCACTTTAAGGCAGGCAAGATGATTCAGCTGGTAGAGGTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CCA 90 bp | CTTAGCAAATCAAAGGCTCTTAATCCAGGTCTGGGAGCCCCTCACAGGAGCTCAATTCAGGGAAGGAGGTaGGAGAGAGCATCCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LSKSKALNPGLGAPHRSSIQGRR*ERASSI Trigger: AATGGAGGATGCTCTCTCCCACCTCCTTCCCTGAAT...TGAGCTCCTGTGAGGGGCTCCCAGACCTGGATTAAGAGCCTTTGATTTGCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CCA 90 bp | GCAGGTGTAAACCAGAGGACAACTTATAGAATTGGCTCTCTCCTTCACTGTGGGTGTGACAGGCTCTTCTaGAGGAGGAGGAAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGVNQRTTYRIGSLLHCGCDRLF*RRRKLL Trigger: GAGGAGCTTCCTCCTCCTCCAGAAGAGCCTGTCACA...CCCACAGTGAAGGAGAGAGCCAATTCTATAAGTTGTCCTCTGGTTTACACCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CCA 90 bp | CAGCACCTCTACCAGCTGAATCATCTTGCCTGCCTTAAAGTGAATTTCCTTAAGGCTTCACAAGCTGCCTaGCCCACTTCCTCACTCACG | + |
|
Preference number: 4 (lower is better) Translates to: QHLYQLNHLACLKVNFLKASQAA*PTSSLT Trigger: CGTGAGTGAGGAAGTGGGCCAGGCAGCTTGTGAAGC...CTTAAGGAAATTCACTTTAAGGCAGGCAAGATGATTCAGCTGGTAGAGGTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CCA 90 bp | GTGCATTTTAAGATTGTAGCTGTGGCTGCCTTCAAATGCAGAGATCCATGTGTCAGGAGGCTCCTCTTCTaGGAGAGGCAGGTAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VHFKIVAVAAFKCRDPCVRRLLF*ERQVGR Trigger: TCTGCCTACCTGCCTCTCCCAGAAGAGGAGCCTCCT...GACACATGGATCTCTGCATTTGAAGGCAGCCACAGCTACAATCTTAAAATGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CCA 90 bp | CATCTTGCCTGCCTTAAAGTGAATTTCCTTAAGAGGGAGAATGTTCTAGGTGTGGCCACACAGTACACCTaGTTCTGGCTGTCCAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: HLACLKVNFLKRENVLGVATQYT*FWLSSA Trigger: TGCGCTGGACAGCCAGAACCAGGTGTACTGTGTGGC...CACACCTAGAACATTCTCCCTCTTAAGGAAATTCACTTTAAGGCAGGCAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR TCA 90 bp | CATCTTGCCTGCCTTAAAGTGAATTTCCTTAAGAGGGAGAATGTTCTAGGTGTGCTCTCTCTGGAAGTGTaGCAGGCTCTTCTGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HLACLKVNFLKRENVLGVLSLEV*QALLEE Trigger: CTCCTCCAGAAGAGCCTGTCACACTTCCAGAGAGAG...CACACCTAGAACATTCTCCCTCTTAAGGAAATTCACTTTAAGGCAGGCAAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR GCA 90 bp | CAGCACCTCTACCAGCTGAATCATCTTGCCTGCCTTAAAGTGAATTTCCTTAAGGATTCTCGCAGATGCTaGACACGGGGGCAAATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QHLYQLNHLACLKVNFLKDSRRC*TRGQIS Trigger: GGAAATTTGCCCCCGTGTGCAGCATCTGCGAGAATC...CTTAAGGAAATTCACTTTAAGGCAGGCAAGATGATTCAGCTGGTAGAGGTGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CCA 90 bp | CATCTTGCCTGCCTTAAAGTGAATTTCCTTAAGAGGGAGAATGTTCTAGGTGTGTGTGACAGGCTCTTCTaGAGGAGGAGGAAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HLACLKVNFLKRENVLGVCDRLF*RRRKLL Trigger: GAGGAGCTTCCTCCTCCTCCAGAAGAGCCTGTCACA...CACACCTAGAACATTCTCCCTCTTAAGGAAATTCACTTTAAGGCAGGCAAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR GCA 90 bp | CATCTTGCCTGCCTTAAAGTGAATTTCCTTAAGAGGGAGAATGTTCTAGGTGTGGATTCTCGCAGATGCTaGACACGGGGGCAAATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HLACLKVNFLKRENVLGVDSRRC*TRGQIS Trigger: GGAAATTTGCCCCCGTGTGCAGCATCTGCGAGAATC...CACACCTAGAACATTCTCCCTCTTAAGGAAATTCACTTTAAGGCAGGCAAGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CCA 90 bp | CATCTTGCCTGCCTTAAAGTGAATTTCCTTAAGAGGGAGAATGTTCTAGGTGTGATTCAGGGAAGGAGGTaGGAGAGAGCATCCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: HLACLKVNFLKRENVLGVIQGRR*ERASSI Trigger: AATGGAGGATGCTCTCTCCCACCTCCTTCCCTGAAT...CACACCTAGAACATTCTCCCTCTTAAGGAAATTCACTTTAAGGCAGGCAAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| 3UTR CAA 72 bp | AATATTGTTTTGAATCTTTTAGTAGATCAGACTAGATaGAACATAGAAATCCACCTGCCTCTGCCTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NIVLNLLVDQTR*NIEIHLPLPPK Trigger: CTTGGGAGGCAGAGGCAGGTGGATTTCTATGTTCAATCTAGTCTGATCTACTAAAAGATTCAAAACAATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS CCA 90 bp | GGAAGCATCTCCCAGGGCCGAGCGCGTCTGGCTTCACAAGCTGCCTaGCCCACTTCCTCACTCACGGCTACATCTCGGCGTGGCGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GSISQGRARLASQAA*PTSSLTATSRRGGA Trigger: GGCACCGCCACGCCGAGATGTAGCCGTGAGTGAGGAAGTGGGCCAGGCAGCTTGTGAAGCCAGACGCGCTCGGCCCTGGGAGATGCTTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 ENSMUST00000123150.2 ENSMUST00000127455.8 ENSMUST00000129602.8 ENSMUST00000130181.8 ENSMUST00000131317.8 ENSMUST00000136831.2 ENSMUST00000141518.8 ENSMUST00000147764.8 ENSMUST00000147785.8 ENSMUST00000153189.8 |
||
| CDS GCA 90 bp | ATTGGTCTTGCCAGAGGGCGTCCAGGTCTTGGGGCTCCTGCCCACTaGGGCCCCAGGTGTCTTTGTGGGAAGCATCTCCCAGGGCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: IGLARGRPGLGAPAH*GPRCLCGKHLPGPS Trigger: GCTCGGCCCTGGGAGATGCTTCCCACAAAGACACCTGGGGCCGCAGTGGGCAGGAGCCCCAAGACCTGGACGCCCTCTGGCAAGACCAAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 ENSMUST00000123150.2 ENSMUST00000127455.8 ENSMUST00000129602.8 ENSMUST00000130181.8 ENSMUST00000131317.8 ENSMUST00000141518.8 ENSMUST00000147764.8 ENSMUST00000147785.8 ENSMUST00000153189.8 |
||
| CDS-3UTR CAA 90 bp | AGTGGTTACGGGCAGCCTAGCAGCAAAGCTGAAGTGGAGGCTGGGTGGCACACAGAGGGCGTCCAGGTCTaGGGGCTCCTGCCCACTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SGYGQPSSKAEVEAGWHTEGVQV*GLLPTA Trigger: CGCAGTGGGCAGGAGCCCCAAGACCTGGACGCCCTC...TGTGTGCCACCCAGCCTCCACTTCAGCTTTGCTGCTAGGCTGCCCGTAACCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGCGCGCGTGCGCGCACTTGTAGAGGCCAGAGCCCCAGTAAAGTCTGGACGGCCCCAGGTGTCTTaGTGGGAAGCATCTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VCARVRALVEARAPVKSGRPQVS*WEASPR Trigger: CCTGGGAGATGCTTCCCACAAAGACACCTGGGGCCG...TCCAGACTTTACTGGGGCTCTGGCCTCTACAAGTGCGCGCACGCGCGCACACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CAA 90 bp | TGGGAGCCCCTCACAGGAGCTCACAGGGTGTGGAAGCAAGCAGAGGCACGTGACCGGCCCCAGGTGTCTTaGTGGGAAGCATCTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WEPLTGAHRVWKQAEARDRPQVS*WEASPR Trigger: CCTGGGAGATGCTTCCCACAAAGACACCTGGGGCCG...GTCACGTGCCTCTGCTTGCTTCCACACCCTGTGAGCTCCTGTGAGGGGCTCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CAA 90 bp | CTCAGCACGGATTCTACAGGAAGGAAGGCTGGGTCGCCGCTACCTCACGTTCTAGAGGGCGTCCAGGTCTaGGGGCTCCTGCCCACTGCG | + |
|
Preference number: 5 (lower is better) Translates to: LSTDSTGRKAGSPLPHVLEGVQV*GLLPTA Trigger: CGCAGTGGGCAGGAGCCCCAAGACCTGGACGCCCTC...TAGAACGTGAGGTAGCGGCGACCCAGCCTTCCTTCCTGTAGAATCCGTGCTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS TCA 90 bp | GTGGAGGCGGGGGTGGGGGCAGGTGCAGTTGCTCCAAGTCGGAAATaGGCGACTTCCCTGGTAAGACAGGAGGCTCCTCTTCTGGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VEAGVGAGAVAPSRK*ATSLVRQEAPLLGE Trigger: CTCTCCCAGAAGAGGAGCCTCCTGTCTTACCAGGGAAGTCGCTCATTTCCGACTTGGAGCAACTGCACCTGCCCCCACCCCCGCCTCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 ENSMUST00000130181.8 ENSMUST00000141518.8 ENSMUST00000147764.8 ENSMUST00000153189.8 |
||
| CDS TCA 90 bp | GGCTCTTCTGGAGGAGGAGGAAGCTCCTCTTCCGAGGGTATGGCGTaGCCAGGCGGAGGGTGGACAGACGATCCCTTTGATGGAGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GSSGGGGSSSSEGMA*PGGGWTDDPFDGAC Trigger: ACAGGCTCCATCAAAGGGATCGTCTGTCCACCCTCCGCCTGGTCACGCCATACCCTCGGAAGAGGAGCTTCCTCCTCCTCCAGAAGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 ENSMUST00000130181.8 ENSMUST00000141518.8 ENSMUST00000153189.8 |
||
| CDS CCA 90 bp | ACAAGCTGCCTGGCCCACTTCCTCACTCACGGCTACATCTCGGCGTaGCGGTGCCAGGGTGATGAAGACAGAGGAGGCCACCCTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TSCLAHFLTHGYISA*RCQGDEDRGGHPFL Trigger: GAGAAAAGGGTGGCCTCCTCTGTCTTCATCACCCTGGCACCGCCACGCCGAGATGTAGCCGTGAGTGAGGAAGTGGGCCAGGCAGCTTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 ENSMUST00000123150.2 ENSMUST00000127455.8 ENSMUST00000129602.8 ENSMUST00000130181.8 ENSMUST00000131317.8 ENSMUST00000136831.2 ENSMUST00000141518.8 ENSMUST00000147764.8 ENSMUST00000147785.8 ENSMUST00000153189.8 |
||
| CDS TCA 90 bp | GGGAAGGAGGTGGGAGAGAGCATCCTCCATTGGAGAGCTGAGGTGTaGCTCCAGAGAGTGAGGCATTGGTCTTGCCAGAGGGCGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GKEVGESILHWRAEV*LQRVRHWSCQRASR Trigger: CCTGGACGCCCTCTGGCAAGACCAATGCCTCACTCTCTGGAGTCACACCTCAGCTCTCCAATGGAGGATGCTCTCTCCCACCTCCTTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 ENSMUST00000127455.8 ENSMUST00000129602.8 ENSMUST00000130181.8 ENSMUST00000131317.8 ENSMUST00000141518.8 ENSMUST00000147764.8 ENSMUST00000147785.8 ENSMUST00000153189.8 |
||
| CDS-3UTR CAA 90 bp | CTCCCTCCCATCCTGAGCCCAGCTCAGCACGGATTCTACAGGAAGGAAGGCTGGTGGGGGCAGGTGCAGTaGCTCCAAGTCGGAAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: LPPILSPAQHGFYRKEGWWGQVQ*LQVGNE Trigger: CTCATTTCCGACTTGGAGCAACTGCACCTGCCCCCA...CCAGCCTTCCTTCCTGTAGAATCCGTGCTGAGCTGGGCTCAGGATGGGAGGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS TCA 90 bp | GAGAGAGCATCCTCCATTGGAGAGCTGAGGTGTGACTCCAGAGAGTaGGGCATTGGTCTTGCCAGAGGGCGTCCAGGTCTTGGGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ERASSIGELRCDSRE*GIGLARGRPGLGAP Trigger: AGGAGCCCCAAGACCTGGACGCCCTCTGGCAAGACCAATGCCTCACTCTCTGGAGTCACACCTCAGCTCTCCAATGGAGGATGCTCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 ENSMUST00000127455.8 ENSMUST00000129602.8 ENSMUST00000130181.8 ENSMUST00000131317.8 ENSMUST00000141518.8 ENSMUST00000147764.8 ENSMUST00000147785.8 ENSMUST00000153189.8 |
||
| CDS-3UTR CAA 90 bp | CATCCTCCCTCCCATCCTGAGCCCAGCTCAGCACGGATTCTACAGGAAGGAAGGTGGGGGCAGGTGCAGTaGCTCCAAGTCGGAAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: HPPSHPEPSSARILQEGRWGQVQ*LQVGNE Trigger: CTCATTTCCGACTTGGAGCAACTGCACCTGCCCCCA...CCTTCCTTCCTGTAGAATCCGTGCTGAGCTGGGCTCAGGATGGGAGGGAGGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CAA 90 bp | CATCCTCCCTCCCATCCTGAGCCCAGCTCAGCACGGATTCTACAGGAAGGAAGGCCCATGCACTCGATTTaGAAGGCGTCCTTCCCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: HPPSHPEPSSARILQEGRPMHSI*KASFPS Trigger: AGACGGGAAGGACGCCTTCAAAATCGAGTGCATGGG...CCTTCCTTCCTGTAGAATCCGTGCTGAGCTGGGCTCAGGATGGGAGGGAGGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS-3UTR CAA 90 bp | CCTAGCAGCAAAGCTGAAGTGGAGGCTGGGTGGCACACATGGGAGACCAAAGAGCAGTGGGTAGCAGCCTaGGTCGGTAGGTTCCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: PSSKAEVEAGWHTWETKEQWVAA*VGRFHR Trigger: TCTGTGGAACCTACCGACCAAGGCTGCTACCCACTG...CTCTTTGGTCTCCCATGTGTGCCACCCAGCCTCCACTTCAGCTTTGCTGCTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
||
| CDS TCA 90 bp | GACAGAAACCACAGACATCCGTGGACACTTCTCTCTCTGGAAGTGTaGCAGGCTCTTCTGGAGGAGGAGGAAGCTCCTCTTCCGAGGGTA | + |
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Preference number: 5 (lower is better) Translates to: DRNHRHPWTLLSLEV*QALLEEEEAPLPRV Trigger: TACCCTCGGAAGAGGAGCTTCCTCCTCCTCCAGAAGAGCCTGTCACACTTCCAGAGAGAGAAGTGTCCACGGATGTCTGTGGTTTCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| CDS-3UTR CAA 90 bp | GCAGGTGTAAACCAGAGGACAACTTATAGAATTGGCTCTCTCCTTCACTGTGGGCGGCCCCAGGTGTCTTaGTGGGAAGCATCTCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: AGVNQRTTYRIGSLLHCGRPQVS*WEASPR Trigger: CCTGGGAGATGCTTCCCACAAAGACACCTGGGGCCG...CCCACAGTGAAGGAGAGAGCCAATTCTATAAGTTGTCCTCTGGTTTACACCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| CDS-3UTR CAA 90 bp | GATTCTACAGGAAGGAAGGCTGGGTCGCCGCTACCTCACGTTCTATGCACTTATCAGTGGGTAGCAGCCTaGGTCGGTAGGTTCCACAGA | + |
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Preference number: 5 (lower is better) Translates to: DSTGRKAGSPLPHVLCTYQWVAA*VGRFHR Trigger: TCTGTGGAACCTACCGACCAAGGCTGCTACCCACTG...ATAAGTGCATAGAACGTGAGGTAGCGGCGACCCAGCCTTCCTTCCTGTAGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| CDS-3UTR CAA 90 bp | GCAGGTGTAAACCAGAGGACAACTTATAGAATTGGCTCTCTCCTTCACTGTGGGTGGGGGCAGGTGCAGTaGCTCCAAGTCGGAAATGAG | + |
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Preference number: 5 (lower is better) Translates to: AGVNQRTTYRIGSLLHCGWGQVQ*LQVGNE Trigger: CTCATTTCCGACTTGGAGCAACTGCACCTGCCCCCA...CCCACAGTGAAGGAGAGAGCCAATTCTATAAGTTGTCCTCTGGTTTACACCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| CDS-3UTR CAA 90 bp | TCTGCTAGGCAGCTAAGCATCATGGTCAGAGACACAGGTATCATCCTGAGACCTCCCATGCACTCGATTTaGAAGGCGTCCTTCCCGTCT | + |
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Preference number: 5 (lower is better) Translates to: SARQLSIMVRDTGIILRPPMHSI*KASFPS Trigger: AGACGGGAAGGACGCCTTCAAAATCGAGTGCATGGG...AGGTCTCAGGATGATACCTGTGTCTCTGACCATGATGCTTAGCTGCCTAGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| CDS-3UTR CAA 90 bp | GTAAACCAGAGGACAACTTATAGAATTGGCTCTCTCCTTCACTGTGGGTCCCAGCAGTGGGTAGCAGCCTaGGTCGGTAGGTTCCACAGA | + |
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Preference number: 5 (lower is better) Translates to: VNQRTTYRIGSLLHCGSQQWVAA*VGRFHR Trigger: TCTGTGGAACCTACCGACCAAGGCTGCTACCCACTG...CTGGGACCCACAGTGAAGGAGAGAGCCAATTCTATAAGTTGTCCTCTGGTTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| CDS GCA 72 bp | GCCAGAGGGCGTCCAGGTCTTGGGGCTCCTGCCCACTaGGGCCCCAGGTGTCTTTGTGGGAAGCATCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: ARGRPGLGAPAH*GPRCLCGKHLP Trigger: TGGGAGATGCTTCCCACAAAGACACCTGGGGCCGCAGTGGGCAGGAGCCCCAAGACCTGGACGCCCTCTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 ENSMUST00000123150.2 ENSMUST00000127455.8 ENSMUST00000129602.8 ENSMUST00000130181.8 ENSMUST00000131317.8 ENSMUST00000141518.8 ENSMUST00000147764.8 ENSMUST00000147785.8 ENSMUST00000153189.8 |
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| CDS GCA 72 bp | TGGTCTTGCCAGAGGGCGTCCAGGTCTTGGGGCTCCTaGCCACTGCGGCCCCAGGTGTCTTTGTGGGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: WSCQRASRSWGS*PLRPQVSLWEA Trigger: TGCTTCCCACAAAGACACCTGGGGCCGCAGTGGGCAGGAGCCCCAAGACCTGGACGCCCTCTGGCAAGACCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 ENSMUST00000123150.2 ENSMUST00000127455.8 ENSMUST00000129602.8 ENSMUST00000130181.8 ENSMUST00000131317.8 ENSMUST00000141518.8 ENSMUST00000147764.8 ENSMUST00000147785.8 ENSMUST00000153189.8 |
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| CDS CCA 72 bp | TCCCAGGGCCGAGCGCGTCTGGCTTCACAAGCTGCCTaGCCCACTTCCTCACTCACGGCTACATCTCGGCGT | + |
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Preference number: 6 (lower is better) Translates to: SQGRARLASQAA*PTSSLTATSRR Trigger: ACGCCGAGATGTAGCCGTGAGTGAGGAAGTGGGCCAGGCAGCTTGTGAAGCCAGACGCGCTCGGCCCTGGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 ENSMUST00000123150.2 ENSMUST00000127455.8 ENSMUST00000129602.8 ENSMUST00000130181.8 ENSMUST00000131317.8 ENSMUST00000136831.2 ENSMUST00000141518.8 ENSMUST00000147764.8 ENSMUST00000147785.8 ENSMUST00000153189.8 |
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| CDS GCA 72 bp | CATCTCCCAGGGCCGAGCGCGTCTGGCTTCACAAGCTaGCTGGCCCACTTCCTCACTCACGGCTACATCTCG | + |
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Preference number: 6 (lower is better) Translates to: HLPGPSASGFTS*LAHFLTHGYIS Trigger: CGAGATGTAGCCGTGAGTGAGGAAGTGGGCCAGGCAGCTTGTGAAGCCAGACGCGCTCGGCCCTGGGAGATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 ENSMUST00000123150.2 ENSMUST00000127455.8 ENSMUST00000129602.8 ENSMUST00000130181.8 ENSMUST00000131317.8 ENSMUST00000136831.2 ENSMUST00000141518.8 ENSMUST00000147764.8 ENSMUST00000147785.8 ENSMUST00000153189.8 |
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| CDS CCA 72 bp | CTGGCCCACTTCCTCACTCACGGCTACATCTCGGCGTaGCGGTGCCAGGGTGATGAAGACAGAGGAGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: LAHFLTHGYISA*RCQGDEDRGGH Trigger: GTGGCCTCCTCTGTCTTCATCACCCTGGCACCGCCACGCCGAGATGTAGCCGTGAGTGAGGAAGTGGGCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 ENSMUST00000123150.2 ENSMUST00000127455.8 ENSMUST00000129602.8 ENSMUST00000130181.8 ENSMUST00000131317.8 ENSMUST00000133874.2 ENSMUST00000136831.2 ENSMUST00000141518.8 ENSMUST00000147764.8 ENSMUST00000147785.8 ENSMUST00000153189.8 |
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| CDS CCA 72 bp | CTTCTGGAGGAGGAGGAAGCTCCTCTTCCGAGGGTATaGCGTGACCAGGCGGAGGGTGGACAGACGATCCCT | + |
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Preference number: 6 (lower is better) Translates to: LLEEEEAPLPRV*RDQAEGGQTIP Trigger: AGGGATCGTCTGTCCACCCTCCGCCTGGTCACGCCATACCCTCGGAAGAGGAGCTTCCTCCTCCTCCAGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 ENSMUST00000130181.8 ENSMUST00000141518.8 ENSMUST00000153189.8 |
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| CDS TCA 72 bp | GGAGGAGGAGGAAGCTCCTCTTCCGAGGGTATGGCGTaGCCAGGCGGAGGGTGGACAGACGATCCCTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: GGGGSSSSEGMA*PGGGWTDDPFD Trigger: ATCAAAGGGATCGTCTGTCCACCCTCCGCCTGGTCACGCCATACCCTCGGAAGAGGAGCTTCCTCCTCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 ENSMUST00000130181.8 ENSMUST00000141518.8 ENSMUST00000153189.8 |
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| CDS CCA 72 bp | TCTTTGTGGGAAGCATCTCCCAGGGCCGAGCGCGTCTaGCTTCACAAGCTGCCTGGCCCACTTCCTCACTCA | + |
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Preference number: 6 (lower is better) Translates to: SLWEASPRAERV*LHKLPGPLPHS Trigger: TGAGTGAGGAAGTGGGCCAGGCAGCTTGTGAAGCCAGACGCGCTCGGCCCTGGGAGATGCTTCCCACAAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 ENSMUST00000123150.2 ENSMUST00000127455.8 ENSMUST00000129602.8 ENSMUST00000130181.8 ENSMUST00000131317.8 ENSMUST00000136831.2 ENSMUST00000141518.8 ENSMUST00000147764.8 ENSMUST00000147785.8 ENSMUST00000153189.8 |
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| CDS TCA 72 bp | GGGGTGGGGGCAGGTGCAGTTGCTCCAAGTCGGAAATaGGCGACTTCCCTGGTAAGACAGGAGGCTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: GVGAGAVAPSRK*ATSLVRQEAPL Trigger: AAGAGGAGCCTCCTGTCTTACCAGGGAAGTCGCTCATTTCCGACTTGGAGCAACTGCACCTGCCCCCACCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 ENSMUST00000130181.8 ENSMUST00000141518.8 ENSMUST00000147764.8 ENSMUST00000153189.8 |
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| CDS GCA 72 bp | CCCGGATCACGTGCTCTTGGACCACCTCTCCGCACTTaGCACACTTCTCCAGAGTATCCTGGTAGCAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: PGSRALGPPLRT*HTSPEYPGSRV Trigger: AACCCTGCTACCAGGATACTCTGGAGAAGTGTGGCAAGTGCGGAGAGGTGGTCCAAGAGCACGTGATCCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 |
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| CDS TCA 72 bp | TCCTCCATTGGAGAGCTGAGGTGTGACTCCAGAGAGTaGGGCATTGGTCTTGCCAGAGGGCGTCCAGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: SSIGELRCDSRE*GIGLARGRPGL Trigger: AAGACCTGGACGCCCTCTGGCAAGACCAATGCCTCACTCTCTGGAGTCACACCTCAGCTCTCCAATGGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 ENSMUST00000127455.8 ENSMUST00000129602.8 ENSMUST00000130181.8 ENSMUST00000131317.8 ENSMUST00000141518.8 ENSMUST00000147764.8 ENSMUST00000147785.8 ENSMUST00000153189.8 |
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| CDS TCA 72 bp | GTGGGAGAGAGCATCCTCCATTGGAGAGCTGAGGTGTaGCTCCAGAGAGTGAGGCATTGGTCTTGCCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: VGESILHWRAEV*LQRVRHWSCQR Trigger: CCTCTGGCAAGACCAATGCCTCACTCTCTGGAGTCACACCTCAGCTCTCCAATGGAGGATGCTCTCTCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 ENSMUST00000127455.8 ENSMUST00000129602.8 ENSMUST00000130181.8 ENSMUST00000131317.8 ENSMUST00000141518.8 ENSMUST00000147764.8 ENSMUST00000147785.8 ENSMUST00000153189.8 |
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| CDS CCA 72 bp | GGACACTTCTCTCTCTGGAAGTGTGACAGGCTCTTCTaGAGGAGGAGGAAGCTCCTCTTCCGAGGGTATGGC | + |
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Preference number: 6 (lower is better) Translates to: GHFSLWKCDRLF*RRRKLLFRGYG Trigger: GCCATACCCTCGGAAGAGGAGCTTCCTCCTCCTCCAGAAGAGCCTGTCACACTTCCAGAGAGAGAAGTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 ENSMUST00000141518.8 |
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| CDS TCA 72 bp | GAAGGAGGTGGGAGAGAGCATCCTCCATTGGAGAGCTaGGGTGTGACTCCAGAGAGTGAGGCATTGGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: EGGGREHPPLES*GVTPESEALVL Trigger: CAAGACCAATGCCTCACTCTCTGGAGTCACACCTCAGCTCTCCAATGGAGGATGCTCTCTCCCACCTCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000006381.11 ENSMUST00000105784.8 ENSMUST00000105785.9 ENSMUST00000127455.8 ENSMUST00000129602.8 ENSMUST00000130181.8 ENSMUST00000131317.8 ENSMUST00000141518.8 ENSMUST00000147764.8 ENSMUST00000147785.8 ENSMUST00000153189.8 |
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