Pregenerated sensors for FBL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046865Ensembl transcript IDs: ENSMUST00000042405.8
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TCACAAGCCACACGTGCAACAGTAACAACACACATCTCTTCAATCCAGACAGCTCACCTCCTCGTCCCCTaGAGCCACCACCCCCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: SQATRATVTTHISSIQTAHLLVP*SHHPLR Trigger: GCGGAGGGGGTGGTGGCTTCAGGGGACGAGGAGGTG...AGCTGTCTGGATTGAAGAGATGTGTGTTGTTACTGTTGCACGTGTGGCTTGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042405.8 |
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| CDS-3UTR GCA 90 bp | TCACAAGCCACACGTGCAACAGTAACAACACACATCTCTTCAATCCAGACAGCTCACCTCGACCCCGGTTaGCCCCAGACTGGAAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: SQATRATVTTHISSIQTAHLDPG*PQTGSP Trigger: GGGGCTTCCAGTCTGGGGGCAACCGGGGTCGAGGTG...AGCTGTCTGGATTGAAGAGATGTGTGTTGTTACTGTTGCACGTGTGGCTTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042405.8 |
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| CDS-3UTR CCA 90 bp | TCACAAGCCACACGTGCAACAGTAACAACACACATCTCTTCAATCCAGACAGCTCGGTTGCCCCCAGACTaGAAGCCCCCACCTCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: SQATRATVTTHISSIQTARLPPD*KPPPRP Trigger: TGGCCGAGGTGGGGGCTTCCAGTCTGGGGGCAACCG...AGCTGTCTGGATTGAAGAGATGTGTGTTGTTACTGTTGCACGTGTGGCTTGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042405.8 |
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| CDS-3UTR GCA 90 bp | TCACAAGCCACACGTGCAACAGTAACAACACACATCTCTTCAATCCAGACAGCTCGTGGGAGACGGTGGTaGCTGAGGCTGCCCCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: SQATRATVTTHISSIQTARGRRW*LRLPQG Trigger: ACCTTGGGGCAGCCTCAGGCACCACCGTCTCCCACG...AGCTGTCTGGATTGAAGAGATGTGTGTTGTTACTGTTGCACGTGTGGCTTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042405.8 |
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| CDS-3UTR GCA 90 bp | TCACAAGCCACACGTGCAACAGTAACAACACACATCTCTTCAATCCAGACAGCTGCCCAGGATAGCTGCTaGCAGCTTGGAGCGGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: SQATRATVTTHISSIQTAAQDSC*QLGAEG Trigger: CCCTTCCGCTCCAAGCTGGCAGCAGCTATCCTGGGC...AGCTGTCTGGATTGAAGAGATGTGTGTTGTTACTGTTGCACGTGTGGCTTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042405.8 |
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| CDS-3UTR GCA 90 bp | ACAAGCCACACGTGCAACAGTAACAACACACATCTCTTCAATCCAGACAGCTCTACTGGTTTCCTCTCTTaGCTCCCCGGCCACCACCTC | + |
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Preference number: 4 (lower is better) Translates to: TSHTCNSNNTHLFNPDSSTGFLS*LPGHHL Trigger: GAGGTGGTGGCCGGGGAGGCAAGAGAGGAAACCAGT...AGAGCTGTCTGGATTGAAGAGATGTGTGTTGTTACTGTTGCACGTGTGGCTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042405.8 |
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| CDS-3UTR TCA 90 bp | ATCACAAGCCACACGTGCAACAGTAACAACACACATCTCTTCAATCCAGACAGCCCTTGGCTCCTGGCTTaGTGTGGATCTGGTCTACGC | + |
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Preference number: 4 (lower is better) Translates to: ITSHTCNSNNTHLFNPDSPWLLA*CGSGLR Trigger: GCGTAGACCAGATCCACATCAAGCCAGGAGCCAAGG...GCTGTCTGGATTGAAGAGATGTGTGTTGTTACTGTTGCACGTGTGGCTTGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042405.8 |
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| CDS-3UTR GCA 90 bp | ATCACAAGCCACACGTGCAACAGTAACAACACACATCTCTTCAATCCAGACAGCGGCTCTAGCGTCAGCTaGTCCTGCGGCTTCATGTTC | + |
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Preference number: 4 (lower is better) Translates to: ITSHTCNSNNTHLFNPDSGSSVS*SCGFMF Trigger: GAACATGAAGCCGCAGGAGCAGCTGACGCTAGAGCC...GCTGTCTGGATTGAAGAGATGTGTGTTGTTACTGTTGCACGTGTGGCTTGTGAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042405.8 |
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| CDS-3UTR CCA 90 bp | ACAAGCCACACGTGCAACAGTAACAACACACATCTCTTCAATCCAGACAGCTCTCGGGTTTGGTCTGGCTaGGCCACATCGGCAAAGATG | + |
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Preference number: 4 (lower is better) Translates to: TSHTCNSNNTHLFNPDSSRVWSG*ATSAKM Trigger: CATCTTTGCCGATGTGGCCCAGCCAGACCAAACCCG...AGAGCTGTCTGGATTGAAGAGATGTGTGTTGTTACTGTTGCACGTGTGGCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042405.8 |
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| CDS-3UTR CCA 90 bp | ACAAGCCACACGTGCAACAGTAACAACACACATCTCTTCAATCCAGACAGCTCTGCCACAATTCGGGTTTaGTCTGGCTGGGCCACATCG | + |
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Preference number: 4 (lower is better) Translates to: TSHTCNSNNTHLFNPDSSATIRV*SGWATS Trigger: CGATGTGGCCCAGCCAGACCAAACCCGAATTGTGGC...AGAGCTGTCTGGATTGAAGAGATGTGTGTTGTTACTGTTGCACGTGTGGCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042405.8 |
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| CDS-3UTR GCA 90 bp | TCACAAGCCACACGTGCAACAGTAACAACACACATCTCTTCAATCCAGACAGCTGTGGGAGAACTCAACTaGGTAGACCAGACCATCCGG | + |
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Preference number: 4 (lower is better) Translates to: SQATRATVTTHISSIQTAVGELN*VDQTIR Trigger: CCGGATGGTCTGGTCTACGCAGTTGAGTTCTCCCAC...AGCTGTCTGGATTGAAGAGATGTGTGTTGTTACTGTTGCACGTGTGGCTTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042405.8 |
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| CDS-3UTR TCA 90 bp | TCACAAGCCACACGTGCAACAGTAACAACACACATCTCTTCAATCCAGACAGCTAAACACAGCCTCTGCTaGCGCAGTGGAGTCAATGCA | + |
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Preference number: 4 (lower is better) Translates to: SQATRATVTTHISSIQTAKHSLC*RSGVNA Trigger: TGCATTGACTCCACTGCGTCAGCAGAGGCTGTGTTT...AGCTGTCTGGATTGAAGAGATGTGTGTTGTTACTGTTGCACGTGTGGCTTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042405.8 |
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| CDS-3UTR TCA 90 bp | ACAAGCCACACGTGCAACAGTAACAACACACATCTCTTCAATCCAGACAGCTCTATAAAGACACCTTCATaGCGATGCGGCTCCACCATC | + |
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Preference number: 4 (lower is better) Translates to: TSHTCNSNNTHLFNPDSSIKTPS*RCGSTI Trigger: GATGGTGGAGCCGCATCGTCATGAAGGTGTCTTTAT...AGAGCTGTCTGGATTGAAGAGATGTGTGTTGTTACTGTTGCACGTGTGGCTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042405.8 |
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| CDS-3UTR TCA 90 bp | ACAAGCCACACGTGCAACAGTAACAACACACATCTCTTCAATCCAGACAGCTCTGGACCAGATTCTTTGTaGCAAGGGCATCCTCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: TSHTCNSNNTHLFNPDSSGPDSL*QGHPPF Trigger: GAAAGGAGGATGCCCTTGTCACAAAGAATCTGGTCC...AGAGCTGTCTGGATTGAAGAGATGTGTGTTGTTACTGTTGCACGTGTGGCTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042405.8 |
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| CDS-3UTR GCA 90 bp | ACAAGCCACACGTGCAACAGTAACAACACACATCTCTTCAATCCAGACAGCTCTGGCTTCATGTTCTCCTaGTGCATCTTCTTCACTTCA | + |
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Preference number: 4 (lower is better) Translates to: TSHTCNSNNTHLFNPDSSGFMFS*CIFFTS Trigger: TGAAGTGAAGAAGATGCAGCAGGAGAACATGAAGCC...AGAGCTGTCTGGATTGAAGAGATGTGTGTTGTTACTGTTGCACGTGTGGCTTGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042405.8 |
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| CDS-3UTR CCA 90 bp | ATCACAAGCCACACGTGCAACAGTAACAACACACATCTCTTCAATCCAGACAGCCATGCGGTATTTGTGTaGGTGTCGAGCATCTTCAAT | + |
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Preference number: 4 (lower is better) Translates to: ITSHTCNSNNTHLFNPDSHAVFV*VSSIFN Trigger: ATTGAAGATGCTCGACACCCACACAAATACCGCATG...GCTGTCTGGATTGAAGAGATGTGTGTTGTTACTGTTGCACGTGTGGCTTGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042405.8 |
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| CDS-3UTR TCA 90 bp | ACAAGCCACACGTGCAACAGTAACAACACACATCTCTTCAATCCAGACAGCTCTTTTGTCATCTCCTTCTaGAATAGAGACTCTCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: TSHTCNSNNTHLFNPDSSFVISF*NRDSLL Trigger: GAGAAGAGAGTCTCTATTTCAGAAGGAGATGACAAA...AGAGCTGTCTGGATTGAAGAGATGTGTGTTGTTACTGTTGCACGTGTGGCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042405.8 |
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| CDS-3UTR CAA 90 bp | TCACAAGCCACACGTGCAACAGTAACAACACACATCTCTTCAATCCAGACAGCTGACTGGTTTCCTCTCTaGCCTCCCCGGCCACCACCT | + |
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Preference number: 5 (lower is better) Translates to: SQATRATVTTHISSIQTADWFPL*PPRPPP Trigger: AGGTGGTGGCCGGGGAGGCAAGAGAGGAAACCAGTC...AGCTGTCTGGATTGAAGAGATGTGTGTTGTTACTGTTGCACGTGTGGCTTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042405.8 |
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| CDS-3UTR CAA 90 bp | ATCACAAGCCACACGTGCAACAGTAACAACACACATCTCTTCAATCCAGACAGCATAGCTGCTGCCAGCTaGGAGCGGAAGGGGTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: ITSHTCNSNNTHLFNPDSIAAAS*ERKGFQ Trigger: CTGGAACCCCTTCCGCTCCAAGCTGGCAGCAGCTAT...GCTGTCTGGATTGAAGAGATGTGTGTTGTTACTGTTGCACGTGTGGCTTGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042405.8 |
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| CDS-3UTR CAA 90 bp | TCACAAGCCACACGTGCAACAGTAACAACACACATCTCTTCAATCCAGACAGCTGGCCACAATTCGGGTTaGGTCTGGCTGGGCCACATC | + |
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Preference number: 5 (lower is better) Translates to: SQATRATVTTHISSIQTAGHNSG*VWLGHI Trigger: GATGTGGCCCAGCCAGACCAAACCCGAATTGTGGCC...AGCTGTCTGGATTGAAGAGATGTGTGTTGTTACTGTTGCACGTGTGGCTTGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042405.8 |
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| CDS-3UTR CAA 90 bp | TCACAAGCCACACGTGCAACAGTAACAACACACATCTCTTCAATCCAGACAGCTACCTTGGCTCCTGGCTaGATGTGGATCTGGTCTACG | + |
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Preference number: 5 (lower is better) Translates to: SQATRATVTTHISSIQTATLAPG*MWIWST Trigger: CGTAGACCAGATCCACATCAAGCCAGGAGCCAAGGT...AGCTGTCTGGATTGAAGAGATGTGTGTTGTTACTGTTGCACGTGTGGCTTGTGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042405.8 |
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| CDS-3UTR CAA 90 bp | TCACAAGCCACACGTGCAACAGTAACAACACACATCTCTTCAATCCAGACAGCTCTCTTCTTGGCCAAGTaGATGAGGTCACGGCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: SQATRATVTTHISSIQTALFLAK*MRSRPE Trigger: CTCTGGCCGTGACCTCATCAACTTGGCCAAGAAGAG...AGCTGTCTGGATTGAAGAGATGTGTGTTGTTACTGTTGCACGTGTGGCTTGTGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042405.8 |
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| CDS-3UTR CAA 90 bp | ACAAGCCACACGTGCAACAGTAACAACACACATCTCTTCAATCCAGACAGCTCTATAAGCATGCGGTATTaGTGTGGGTGTCGAGCATCT | + |
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Preference number: 5 (lower is better) Translates to: TSHTCNSNNTHLFNPDSSISMRY*CGCRAS Trigger: AGATGCTCGACACCCACACAAATACCGCATGCTTAT...AGAGCTGTCTGGATTGAAGAGATGTGTGTTGTTACTGTTGCACGTGTGGCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042405.8 |
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| CDS-3UTR CAA 90 bp | ATCACAAGCCACACGTGCAACAGTAACAACACACATCTCTTCAATCCAGACAGCGTGGAGTCAATGCAGTaGGCCTTAATGGAAATCACA | + |
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Preference number: 5 (lower is better) Translates to: ITSHTCNSNNTHLFNPDSVESMQ*ALMEIT Trigger: TGTGATTTCCATTAAGGCCAACTGCATTGACTCCAC...GCTGTCTGGATTGAAGAGATGTGTGTTGTTACTGTTGCACGTGTGGCTTGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042405.8 |
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| CDS-3UTR CAA 90 bp | ATCACAAGCCACACGTGCAACAGTAACAACACACATCTCTTCAATCCAGACAGCGCTCTGTACTCAATTTaGTCATCTCCTTCTGAAATA | + |
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Preference number: 5 (lower is better) Translates to: ITSHTCNSNNTHLFNPDSALYSI*SSPSEI Trigger: TATTTCAGAAGGAGATGACAAAATTGAGTACAGAGC...GCTGTCTGGATTGAAGAGATGTGTGTTGTTACTGTTGCACGTGTGGCTTGTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042405.8 |
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