Pregenerated sensors for FAXC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028246Ensembl transcript IDs: ENSMUST00000029908.8
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATGTGAAAACTGGTCCAGGCCTGAAGATCTCCTCCCAGCTCAAATaGATTTCTATCTGGGAAATCAGACCAACCCCAGGGAGCGGTGGC | + |
|
Preference number: 1 (lower is better) Translates to: HVKTGPGLKISSQLK*ISIWEIRPTPGSGG Trigger: GCCACCGCTCCCTGGGGTTGGTCTGATTTCCCAGATAGAAATCCATTTGAGCTGGGAGGAGATCTTCAGGCCTGGACCAGTTTTCACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| 3UTR TCA 90 bp | AATGCACCCGGCAAAGGAAGAGATGCTGTTCTTAAAGCACAGGGCTaGGGACCATGCGTAGCTGCTGCTGATTTGCCAAGCTCCTTCCAA | + |
|
Preference number: 1 (lower is better) Translates to: NAPGKGRDAVLKAQG*GPCVAAADLPSSFQ Trigger: TTGGAAGGAGCTTGGCAAATCAGCAGCAGCTACGCATGGTCCTCAGCCCTGTGCTTTAAGAACAGCATCTCTTCCTTTGCCGGGTGCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| 3UTR CCA 90 bp | GCCAAGCTCCTTCCAAAGTTCCGCCAGCAAAGTCACAAGGAGAAATaGCACAGTCCTAATTGGTTTTGTGTGTGTTTCATCTGCACAGCC | + |
|
Preference number: 1 (lower is better) Translates to: AKLLPKFRQQSHKEK*HSPNWFCVCFICTA Trigger: GGCTGTGCAGATGAAACACACACAAAACCAATTAGGACTGTGCCATTTCTCCTTGTGACTTTGCTGGCGGAACTTTGGAAGGAGCTTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| 3UTR GCA 90 bp | TGTGTGTGTTTCATCTGCACAGCCTTGGCAAGTGACTGCACTTGTTaGCCAAGTATGAAAGTCCTTTGCCCTCCGACCCTAACATTTATG | + |
|
Preference number: 1 (lower is better) Translates to: CVCFICTALASDCTC*PSMKVLCPPTLTFM Trigger: CATAAATGTTAGGGTCGGAGGGCAAAGGACTTTCATACTTGGGCAACAAGTGCAGTCACTTGCCAAGGCTGTGCAGATGAAACACACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| 3UTR GCA 90 bp | AATTGGTTTTGTGTGTGTTTCATCTGCACAGCCTTGGCAAGTGACTaGACTTGTTGCCCAAGTATGAAAGTCCTTTGCCCTCCGACCCTA | + |
|
Preference number: 1 (lower is better) Translates to: NWFCVCFICTALASD*TCCPSMKVLCPPTL Trigger: TAGGGTCGGAGGGCAAAGGACTTTCATACTTGGGCAACAAGTGCAGTCACTTGCCAAGGCTGTGCAGATGAAACACACACAAAACCAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| 3UTR CCA 90 bp | AAGTTCCGCCAGCAAAGTCACAAGGAGAAATGGCACAGTCCTAATTaGTTTTGTGTGTGTTTCATCTGCACAGCCTTGGCAAGTGACTGC | + |
|
Preference number: 1 (lower is better) Translates to: KFRQQSHKEKWHSPN*FCVCFICTALASDC Trigger: GCAGTCACTTGCCAAGGCTGTGCAGATGAAACACACACAAAACCAATTAGGACTGTGCCATTTCTCCTTGTGACTTTGCTGGCGGAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| 3UTR GCA 90 bp | AAGGAGAAATGGCACAGTCCTAATTGGTTTTGTGTGTGTTTCATCTaGACAGCCTTGGCAAGTGACTGCACTTGTTGCCCAAGTATGAAA | + |
|
Preference number: 1 (lower is better) Translates to: KEKWHSPNWFCVCFI*TALASDCTCCPSMK Trigger: TTTCATACTTGGGCAACAAGTGCAGTCACTTGCCAAGGCTGTGCAGATGAAACACACACAAAACCAATTAGGACTGTGCCATTTCTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| 3UTR CCA 90 bp | GGAAAAGAAATAAGGCGGCTTATAGTCCAGTTAGCATGTGAAAACTaGTCCAGGCCTGAAGATCTCCTCCCAGCTCAAATGGATTTCTAT | + |
|
Preference number: 1 (lower is better) Translates to: GKEIRRLIVQLACEN*SRPEDLLPAQMDFY Trigger: ATAGAAATCCATTTGAGCTGGGAGGAGATCTTCAGGCCTGGACCAGTTTTCACATGCTAACTGGACTATAAGCCGCCTTATTTCTTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCAAAGCCCCATTCCAATGCACCCGGCAAAGGAAGAGATGCTGTTCTTAAAAACCCCAGGGAGCGGTaGCTCCTGAGGACGAGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: AAKPHSNAPGKGRDAVLKNPRER*LLRTRL Trigger: GAGCCTCGTCCTCAGGAGCCACCGCTCCCTGGGGTT...TTTAAGAACAGCATCTCTTCCTTTGCCGGGTGCATTGGAATGGGGCTTTGCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTAAGTTAGCACTTGCGGGGCAGCAAAGCCCCATTCCAATGCACCCGGCAAAGTTAAAGGACCTGCCCTaGACCACACAGCTAGTCACC | + |
|
Preference number: 2 (lower is better) Translates to: GKLALAGQQSPIPMHPAKLKDLP*TTQLVT Trigger: GGTGACTAGCTGTGTGGTTCAGGGCAGGTCCTTTAA...CTTTGCCGGGTGCATTGGAATGGGGCTTTGCTGCCCCGCAAGTGCTAACTTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCTCCAAATCAATAGACACAGGTAAGTTAGCACTTGCGGGGCAGCAAAGCCCCGCCTTGGCAAGTGACTaGACTTGTTGCCCAAGTATG | + |
|
Preference number: 2 (lower is better) Translates to: LSKSIDTGKLALAGQQSPALASD*TCCPSM Trigger: CATACTTGGGCAACAAGTGCAGTCACTTGCCAAGGC...GGGGCTTTGCTGCCCCGCAAGTGCTAACTTACCTGTGTCTATTGATTTGGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTAAGTTAGCACTTGCGGGGCAGCAAAGCCCCATTCCAATGCACCCGGCAAAGAAATGGATTTCTATCTaGGAAATCAGACCAACCCCA | + |
|
Preference number: 2 (lower is better) Translates to: GKLALAGQQSPIPMHPAKKWISI*EIRPTP Trigger: TGGGGTTGGTCTGATTTCCCAGATAGAAATCCATTT...CTTTGCCGGGTGCATTGGAATGGGGCTTTGCTGCCCCGCAAGTGCTAACTTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTAAGTTAGCACTTGCGGGGCAGCAAAGCCCCATTCCAATGCACCCGGCAAAGCCAGTTGATGAAAGATaGTCAAGAATCCATCTGACA | + |
|
Preference number: 2 (lower is better) Translates to: GKLALAGQQSPIPMHPAKPVDER*SRIHLT Trigger: TGTCAGATGGATTCTTGACCATCTTTCATCAACTGG...CTTTGCCGGGTGCATTGGAATGGGGCTTTGCTGCCCCGCAAGTGCTAACTTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTCCAAATCAATAGACACAGGTAAGTTAGCACTTGCGGGGCAGCAAAGCCCCTCATCTGCACAGCCTTaGCAAGTGACTGCACTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: LSKSIDTGKLALAGQQSPSSAQP*QVTALV Trigger: AACAAGTGCAGTCACTTGCCAAGGCTGTGCAGATGA...GGGGCTTTGCTGCCCCGCAAGTGCTAACTTACCTGTGTCTATTGATTTGGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCAAAGCCCCATTCCAATGCACCCGGCAAAGGAAGAGATGCTGTTCTTAAATTAGCATGTGAAAACTaGTCCAGGCCTGAAGATCTC | + |
|
Preference number: 2 (lower is better) Translates to: AAKPHSNAPGKGRDAVLKLACEN*SRPEDL Trigger: GAGATCTTCAGGCCTGGACCAGTTTTCACATGCTAA...TTTAAGAACAGCATCTCTTCCTTTGCCGGGTGCATTGGAATGGGGCTTTGCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| 3UTR CAA 90 bp | TGGCACAGTCCTAATTGGTTTTGTGTGTGTTTCATCTGCACAGCCTaGGCAAGTGACTGCACTTGTTGCCCAAGTATGAAAGTCCTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: WHSPNWFCVCFICTA*ASDCTCCPSMKVLC Trigger: GCAAAGGACTTTCATACTTGGGCAACAAGTGCAGTCACTTGCCAAGGCTGTGCAGATGAAACACACACAAAACCAATTAGGACTGTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTCCAAATCAATAGACACAGGTAAGTTAGCACTTGCGGGGCAGCAAAGCCCCTCCAATGAAAATTGGTaGACTTCACTTGACTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: LSKSIDTGKLALAGQQSPSNENW*TSLDFC Trigger: ACAGAAGTCAAGTGAAGTCCACCAATTTTCATTGGA...GGGGCTTTGCTGCCCCGCAAGTGCTAACTTACCTGTGTCTATTGATTTGGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| 3UTR-3UTR TCA 90 bp | AATGGCACAGTCCTAATTGGTTTTGTGTGTGTTTCATCTGCACAGCCTTGGCAATTAGACGGAGCCATCTaGATGGTTCTGGTTTTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: NGTVLIGFVCVSSAQPWQLDGAI*MVLVLF Trigger: AAACAAAACCAGAACCATTCAGATGGCTCCGTCTAA...TTGCCAAGGCTGTGCAGATGAAACACACACAAAACCAATTAGGACTGTGCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAAGTCACAAGGAGAAATGGCACAGTCCTAATTGGTTTTGTGTGTGTTTCATCTTGGTGGACTTCACTTaGCTTCTGTCTCGACATACA | + |
|
Preference number: 2 (lower is better) Translates to: QSHKEKWHSPNWFCVCFILVDFT*LLSRHT Trigger: TGTATGTCGAGACAGAAGTCAAGTGAAGTCCACCAA...GATGAAACACACACAAAACCAATTAGGACTGTGCCATTTCTCCTTGTGACTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAAGTCACAAGGAGAAATGGCACAGTCCTAATTGGTTTTGTGTGTGTTTCATCCCATCCAATGAAAATTaGTGGACTTCACTTGACTTC | + |
|
Preference number: 2 (lower is better) Translates to: QSHKEKWHSPNWFCVCFIPSNEN*WTSLDF Trigger: GAAGTCAAGTGAAGTCCACCAATTTTCATTGGATGG...GATGAAACACACACAAAACCAATTAGGACTGTGCCATTTCTCCTTGTGACTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| 3UTR CCA 72 bp | ACTGGTCCAGGCCTGAAGATCTCCTCCCAGCTCAAATaGATTTCTATCTGGGAAATCAGACCAACCCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: TGPGLKISSQLK*ISIWEIRPTPG Trigger: CCCTGGGGTTGGTCTGATTTCCCAGATAGAAATCCATTTGAGCTGGGAGGAGATCTTCAGGCCTGGACCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| 3UTR GCA 72 bp | TTCATCTGCACAGCCTTGGCAAGTGACTGCACTTGTTaGCCAAGTATGAAAGTCCTTTGCCCTCCGACCCTA | + |
|
Preference number: 3 (lower is better) Translates to: FICTALASDCTC*PSMKVLCPPTL Trigger: TAGGGTCGGAGGGCAAAGGACTTTCATACTTGGGCAACAAGTGCAGTCACTTGCCAAGGCTGTGCAGATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| 3UTR GCA 72 bp | TGTGTGTGTTTCATCTGCACAGCCTTGGCAAGTGACTaGACTTGTTGCCCAAGTATGAAAGTCCTTTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: CVCFICTALASD*TCCPSMKVLCP Trigger: AGGGCAAAGGACTTTCATACTTGGGCAACAAGTGCAGTCACTTGCCAAGGCTGTGCAGATGAAACACACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| 3UTR CCA 72 bp | ATAAGGCGGCTTATAGTCCAGTTAGCATGTGAAAACTaGTCCAGGCCTGAAGATCTCCTCCCAGCTCAAATG | + |
|
Preference number: 3 (lower is better) Translates to: IRRLIVQLACEN*SRPEDLLPAQM Trigger: CATTTGAGCTGGGAGGAGATCTTCAGGCCTGGACCAGTTTTCACATGCTAACTGGACTATAAGCCGCCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCCAAATCAATAGACACAGGTAAGTTAGCACTTGCGGGGCAGCAAAGCCCCTACTTAAAACCCCAGTaGATGAAAGATGGTCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LSKSIDTGKLALAGQQSPYLKPQ*MKDGQE Trigger: TTCTTGACCATCTTTCATCAACTGGGGTTTTAAGTA...GGGGCTTTGCTGCCCCGCAAGTGCTAACTTACCTGTGTCTATTGATTTGGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| 3UTR CCA 72 bp | CTTCCAAAGTTCCGCCAGCAAAGTCACAAGGAGAAATaGCACAGTCCTAATTGGTTTTGTGTGTGTTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: LPKFRQQSHKEK*HSPNWFCVCFI Trigger: GATGAAACACACACAAAACCAATTAGGACTGTGCCATTTCTCCTTGTGACTTTGCTGGCGGAACTTTGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR TCA 90 bp | CTATCTGGGAAATCAGACCAACCCCAGGGAGCGGTGGCTCCTGAGGACGAGGCTAGCCCAGCCCTGCCATaGTCCCACCGTAATCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSGKSDQPQGAVAPEDEASPALP*SHRNPA Trigger: TGCAGGATTACGGTGGGATCATGGCAGGGCTGGGCT...AGCCTCGTCCTCAGGAGCCACCGCTCCCTGGGGTTGGTCTGATTTCCCAGATAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR CCA 90 bp | GGTAAGTTAGCACTTGCGGGGCAGCAAAGCCCCATTCCAATGCACCCGGCAAAGCCACCACGCACGGCCTaGACGAGGCAAAGCCAACCC | + |
|
Preference number: 4 (lower is better) Translates to: GKLALAGQQSPIPMHPAKPPRTA*TRQSQP Trigger: GGGTTGGCTTTGCCTCGTCCAGGCCGTGCGTGGTGG...CTTTGCCGGGTGCATTGGAATGGGGCTTTGCTGCCCCGCAAGTGCTAACTTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR TCA 90 bp | GGTAAGTTAGCACTTGCGGGGCAGCAAAGCCCCATTCCAATGCACCCGGCAAAGACCGCCGCCACTAAGTaGCAGCATCTTCCGGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GKLALAGQQSPIPMHPAKTAATK*QHLPGL Trigger: GAGACCCGGAAGATGCTGTCACTTAGTGGCGGCGGT...CTTTGCCGGGTGCATTGGAATGGGGCTTTGCTGCCCCGCAAGTGCTAACTTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR GCA 90 bp | AGATCTCCTCCCAGCTCAAATGGATTTCTATCTGGGAAATCAGACCAACCCCAGCCGAGAAGCGGCCAATaGCGTGGCCGTGCATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RSPPSSNGFLSGKSDQPQPRSGQ*RGRASP Trigger: GGGAGATGCACGGCCACGGCATTGGCCGCTTCTCGG...CTGGGGTTGGTCTGATTTCCCAGATAGAAATCCATTTGAGCTGGGAGGAGATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR GCA 90 bp | CCTCCCAGCTCAAATGGATTTCTATCTGGGAAATCAGACCAACCCCAGGGAGCGGTGTGTGAGTCTTGCTaGCCTCGCTGCTCTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PPSSNGFLSGKSDQPQGAVCESC*PRCSPQ Trigger: CTGAGGAGAGCAGCGAGGGCAGCAAGACTCACACAC...CGCTCCCTGGGGTTGGTCTGATTTCCCAGATAGAAATCCATTTGAGCTGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR CCA 90 bp | AGGCGGCTTATAGTCCAGTTAGCATGTGAAAACTGGTCCAGGCCTGAAGATCTCAAGCGGCCAATGCCGTaGCCGTGCATCTCCCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RRLIVQLACENWSRPEDLKRPMP*PCISRF Trigger: GAAGCGGGAGATGCACGGCCACGGCATTGGCCGCTT...GAGATCTTCAGGCCTGGACCAGTTTTCACATGCTAACTGGACTATAAGCCGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCCAAATCAATAGACACAGGTAAGTTAGCACTTGCGGGGCAGCAAAGCCCCAGAGAGAGTGTCCGGTaGAATCCGTGTCTGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSKSIDTGKLALAGQQSPRESVR*NPCLGS Trigger: GGACCCCAGACACGGATTTCACCGGACACTCTCTCT...GGGGCTTTGCTGCCCCGCAAGTGCTAACTTACCTGTGTCTATTGATTTGGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR TCA 90 bp | CCTCCCAGCTCAAATGGATTTCTATCTGGGAAATCAGACCAACCCCAGGGAGCGGCCAGAATTTCCTCCTaGTCCTCTCGCAGTACATGG | + |
|
Preference number: 4 (lower is better) Translates to: PPSSNGFLSGKSDQPQGAARISS*SSRSTW Trigger: CCATGTACTGCGAGAGGATCAGGAGGAAATTCTGGC...CGCTCCCTGGGGTTGGTCTGATTTCCCAGATAGAAATCCATTTGAGCTGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR GCA 90 bp | CCTCCCAGCTCAAATGGATTTCTATCTGGGAAATCAGACCAACCCCAGGGAGCGAGCCGAAGAAGGAGATaGTCTGGTTCCAGCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPSSNGFLSGKSDQPQGASRRRR*SGSSSG Trigger: ACCTGAGCTGGAACCAGAGCATCTCCTTCTTCGGCT...CGCTCCCTGGGGTTGGTCTGATTTCCCAGATAGAAATCCATTTGAGCTGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR CCA 90 bp | AGGCGGCTTATAGTCCAGTTAGCATGTGAAAACTGGTCCAGGCCTGAAGATCTCATGACCAGGAGTTCGTaGAGCAGATACGCAGCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: RRLIVQLACENWSRPEDLMTRSS*SRYAAA Trigger: CGCGGCTGCGTATCTGCTCCACGAACTCCTGGTCAT...GAGATCTTCAGGCCTGGACCAGTTTTCACATGCTAACTGGACTATAAGCCGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR GCA 90 bp | GTCCTAATTGGTTTTGTGTGTGTTTCATCTGCACAGCCTTGGCAAGTGACTGCAATCCGAGCCCAGCCCTaGCATGATCCCACCGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: VLIGFVCVSSAQPWQVTAIRAQP*HDPTVI Trigger: GATTACGGTGGGATCATGGCAGGGCTGGGCTCGGAT...TGCAGTCACTTGCCAAGGCTGTGCAGATGAAACACACACAAAACCAATTAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR GCA 90 bp | GCAGCAAAGCCCCATTCCAATGCACCCGGCAAAGGAAGAGATGCTGTTCTTAAAGGTCCACATCGCCTGTaGCAAGTGTCCAAAGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: AAKPHSNAPGKGRDAVLKGPHRL*QVSKDS Trigger: ACTGTCTTTGGACACTTGGCACAGGCGATGTGGACC...TTTAAGAACAGCATCTCTTCCTTTGCCGGGTGCATTGGAATGGGGCTTTGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCAAAGCCCCATTCCAATGCACCCGGCAAAGGAAGAGATGCTGTTCTTAAAAAGAAGGAGATGCTCTaGTTCCAGCTCAGGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: AAKPHSNAPGKGRDAVLKKKEML*FQLRST Trigger: GGTGGACCTGAGCTGGAACCAGAGCATCTCCTTCTT...TTTAAGAACAGCATCTCTTCCTTTGCCGGGTGCATTGGAATGGGGCTTTGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCCAAATCAATAGACACAGGTAAGTTAGCACTTGCGGGGCAGCAAAGCCCCGCAAAGGGAAAGCGATaGTGTCCCCATAAAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSKSIDTGKLALAGQQSPAKGKR*CPHKRR Trigger: TCTCCTTTTATGGGGACATCATCGCTTTCCCTTTGC...GGGGCTTTGCTGCCCCGCAAGTGCTAACTTACCTGTGTCTATTGATTTGGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR GCA 90 bp | CACGTACAACAGCAGCCAAGGGACATGAGCTCCTATGTCTTTTCTGATGGTATTCCAATGCCGTGGCCGTaGATCTCCCGCTTCACAATT | + |
|
Preference number: 4 (lower is better) Translates to: HVQQQPRDMSSYVFSDGIPMPWP*ISRFTI Trigger: AATTGTGAAGCGGGAGATGCACGGCCACGGCATTGG...AATACCATCAGAAAAGACATAGGAGCTCATGTCCCTTGGCTGCTGTTGTACGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR GCA 90 bp | AGGCGGCTTATAGTCCAGTTAGCATGTGAAAACTGGTCCAGGCCTGAAGATCTCTTGTCATCATCGTGGTaGCACTCGGGCCAGAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: RRLIVQLACENWSRPEDLLSSSW*HSGQNF Trigger: GAAATTCTGGCCCGAGTGGCACCACGATGATGACAA...GAGATCTTCAGGCCTGGACCAGTTTTCACATGCTAACTGGACTATAAGCCGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR GCA 90 bp | AATGGCACAGTCCTAATTGGTTTTGTGTGTGTTTCATCTGCACAGCCTTGGCAATGGGTGTGTGAGTCTTaGTGCCCTCGCTGCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NGTVLIGFVCVSSAQPWQWVCES*CPRCSP Trigger: AGGAGAGCAGCGAGGGCAGCAAGACTCACACACCCA...TTGCCAAGGCTGTGCAGATGAAACACACACAAAACCAATTAGGACTGTGCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR TCA 90 bp | AATGGCACAGTCCTAATTGGTTTTGTGTGTGTTTCATCTGCACAGCCTTGGCAATCTTCCGGGTCTCATTaGGATTGTCCACCCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NGTVLIGFVCVSSAQPWQSSGSH*DCPPTG Trigger: GCCAGTGGGTGGACAATCTCAATGAGACCCGGAAGA...TTGCCAAGGCTGTGCAGATGAAACACACACAAAACCAATTAGGACTGTGCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR GCA 90 bp | AGATCTCCTCCCAGCTCAAATGGATTTCTATCTGGGAAATCAGACCAACCCCAGTCTTGCTGCCCTCGCTaGTCTCCTCAGACTCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: RSPPSSNGFLSGKSDQPQSCCPR*SPQTHK Trigger: TTTATGAGTCTGAGGAGAGCAGCGAGGGCAGCAAGA...CTGGGGTTGGTCTGATTTCCCAGATAGAAATCCATTTGAGCTGGGAGGAGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR CCA 90 bp | AATGGCACAGTCCTAATTGGTTTTGTGTGTGTTTCATCTGCACAGCCTTGGCAAGCTCTTCCACCATCTTaGTCACGGCTCTTGAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: NGTVLIGFVCVSSAQPWQALPPS*SRLLRR Trigger: CCGTCTCAAGAGCCGTGACCAAGATGGTGGAAGAGC...TTGCCAAGGCTGTGCAGATGAAACACACACAAAACCAATTAGGACTGTGCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR CCA 90 bp | GTCCTAATTGGTTTTGTGTGTGTTTCATCTGCACAGCCTTGGCAAGTGACTGCAGTGTTGTCATCATCGTaGTGCCACTCGGGCCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VLIGFVCVSSAQPWQVTAVLSSS*CHSGQN Trigger: ATTCTGGCCCGAGTGGCACCACGATGATGACAACAC...TGCAGTCACTTGCCAAGGCTGTGCAGATGAAACACACACAAAACCAATTAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTAATTGGTTTTGTGTGTGTTTCATCTGCACAGCCTTGGCAAGTGACTGCACAAGGCATCTTCCCTTaGGCAGAGAGTTTTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VLIGFVCVSSAQPWQVTAQGIFP*AESFPP Trigger: TGGTGGAAAACTCTCTGCTCAAGGGAAGATGCCTTG...TGCAGTCACTTGCCAAGGCTGTGCAGATGAAACACACACAAAACCAATTAGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGTCACAAGGAGAAATGGCACAGTCCTAATTGGTTTTGTGTGTGTTTCATCCTTGGTCACGGCTCTTaGGACGGCTCTTTCATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QSHKEKWHSPNWFCVCFILGHGS*DGSFMG Trigger: CCCCATGAAAGAGCCGTCTCAAGAGCCGTGACCAAG...GATGAAACACACACAAAACCAATTAGGACTGTGCCATTTCTCCTTGTGACTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR CCA 90 bp | CACGTACAACAGCAGCCAAGGGACATGAGCTCCTATGTCTTTTCTGATGGTATTGAGACGGCTCTTTCATaGGGGCCGAGGCTTTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: HVQQQPRDMSSYVFSDGIETALS*GPRLLF Trigger: AAATAAAAGCCTCGGCCCCCATGAAAGAGCCGTCTC...AATACCATCAGAAAAGACATAGGAGCTCATGTCCCTTGGCTGCTGTTGTACGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCAAAGCCCCATTCCAATGCACCCGGCAAAGGAAGAGATGCTGTTCTTAAAAGTGTCCAAAGACAGTaGCATCAAGAGTGGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AAKPHSNAPGKGRDAVLKSVQRQ*HQEWKA Trigger: AGCTTTCCACTCTTGATGCCACTGTCTTTGGACACT...TTTAAGAACAGCATCTCTTCCTTTGCCGGGTGCATTGGAATGGGGCTTTGCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR GCA 90 bp | GTCCTAATTGGTTTTGTGTGTGTTTCATCTGCACAGCCTTGGCAAGTGACTGCATTGGAGTCGAGCTCTTaGTGTTTCCTAATGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLIGFVCVSSAQPWQVTALESSS*CFLMTR Trigger: CCTGGTCATTAGGAAACAGCAAGAGCTCGACTCCAA...TGCAGTCACTTGCCAAGGCTGTGCAGATGAAACACACACAAAACCAATTAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR CCA 90 bp | AGATCTCCTCCCAGCTCAAATGGATTTCTATCTGGGAAATCAGACCAACCCCAGCCTCAGACTCATAAATaGTGTTGTCATCATCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSPPSSNGFLSGKSDQPQPQTHK*CCHHRG Trigger: ACCACGATGATGACAACACCATTTATGAGTCTGAGG...CTGGGGTTGGTCTGATTTCCCAGATAGAAATCCATTTGAGCTGGGAGGAGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| 3UTR CAA 72 bp | AGTAACAGCCATCCAATGAAAATTGGTGGACTTCACTaGACTTCTGTCTCGACATACAAGTACACACACACA | + |
|
Preference number: 4 (lower is better) Translates to: SNSHPMKIGGLH*TSVSTYKYTHT Trigger: TGTGTGTGTGTACTTGTATGTCGAGACAGAAGTCAAGTGAAGTCCACCAATTTTCATTGGATGGCTGTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS GCA 90 bp | AGGAGAAGGGCTCCTCGGACCCGGCCCACCAGCCGAAGAAGGAGATaGTCTGGTTCCAGCTCAGGTCCACCACGCACGGCCTGGACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RRRAPRTRPTSRRRR*SGSSSGPPRTAWTR Trigger: CCTCGTCCAGGCCGTGCGTGGTGGACCTGAGCTGGAACCAGAGCATCTCCTTCTTCGGCTGGTGGGCCGGGTCCGAGGAGCCCTTCTCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS CCA 90 bp | AAGGGCTCCTCGGACCCGGCCCACCAGCCGAAGAAGGAGATGCTCTaGTTCCAGCTCAGGTCCACCACGCACGGCCTGGACGAGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KGSSDPAHQPKKEML*FQLRSTTHGLDEAK Trigger: CTTTGCCTCGTCCAGGCCGTGCGTGGTGGACCTGAGCTGGAACCAGAGCATCTCCTTCTTCGGCTGGTGGGCCGGGTCCGAGGAGCCCTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS TCA 90 bp | CACGACCCACCTGAGCAGGTTACTGAAGGGACCGCCGCCACTAAGTaGCAGCATCTTCCGGGTCTCATTGAGATTGTCCACCCACTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HDPPEQVTEGTAATK*QHLPGLIEIVHPLA Trigger: TGCCAGTGGGTGGACAATCTCAATGAGACCCGGAAGATGCTGTCACTTAGTGGCGGCGGTCCCTTCAGTAACCTGCTCAGGTGGGTCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS CCA 90 bp | ATGCCGTGGCCGTGCATCTCCCGCTTCACAATTCCTTTTGTTATGTaGCACACGACCCACCTGAGCAGGTTACTGAAGGGACCGCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: MPWPCISRFTIPFVM*HTTHLSRLLKGPPP Trigger: TGGCGGCGGTCCCTTCAGTAACCTGCTCAGGTGGGTCGTGTGCCACATAACAAAAGGAATTGTGAAGCGGGAGATGCACGGCCACGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS CCA 90 bp | CTCCACATCGGAGTCAAAGAGAGAGTGTCCGGTGAAATCCGTGTCTaGGGTCCTGGAGAAACTGTTCTCAGCCCCCTCGTCCTCAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LHIGVKERVSGEIRV*GPGETVLSPLVLKG Trigger: ACCTTTGAGGACGAGGGGGCTGAGAACAGTTTCTCCAGGACCCCAGACACGGATTTCACCGGACACTCTCTCTTTGACTCCGATGTGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR CAA 90 bp | CTATCTGGGAAATCAGACCAACCCCAGGGAGCGGTGGCTCCTGAGGACGAGGCTGCTTCACAATTCCTTTaGTTATGTGGCACACGACCC | + |
|
Preference number: 5 (lower is better) Translates to: LSGKSDQPQGAVAPEDEAASQFL*LCGTRP Trigger: GGGTCGTGTGCCACATAACAAAAGGAATTGTGAAGC...AGCCTCGTCCTCAGGAGCCACCGCTCCCTGGGGTTGGTCTGATTTCCCAGATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR CAA 90 bp | CCTCCCAGCTCAAATGGATTTCTATCTGGGAAATCAGACCAACCCCAGGGAGCGTTAGCCGCTCCGGTCTaGTCCCTGGTAAGGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PPSSNGFLSGKSDQPQGALAAPV*SLVRST Trigger: TGTGGACCTTACCAGGGACAAGACCGGAGCGGCTAA...CGCTCCCTGGGGTTGGTCTGATTTCCCAGATAGAAATCCATTTGAGCTGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS CCA 90 bp | GTGTGTGAGTCTTGCTGCCCTCGCTGCTCTCCTCAGACTCATAAATaGTGTTGTCATCATCGTGGTGCCACTCGGGCCAGAATTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VCESCCPRCSPQTHK*CCHHRGATRARISS Trigger: GGAGGAAATTCTGGCCCGAGTGGCACCACGATGATGACAACACCATTTATGAGTCTGAGGAGAGCAGCGAGGGCAGCAAGACTCACACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS TCA 90 bp | TGTAGTCATCCATCTCCACATCGGAGTCAAAGAGAGAGTGTCCGGTaGAATCCGTGTCTGGGGTCCTGGAGAAACTGTTCTCAGCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: CSHPSPHRSQRESVR*NPCLGSWRNCSQPP Trigger: AGGGGGCTGAGAACAGTTTCTCCAGGACCCCAGACACGGATTTCACCGGACACTCTCTCTTTGACTCCGATGTGGAGATGGATGACTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS GCA 90 bp | GGTCAAATAAAGGGTTTTCTTCCACCAGGGATCCGAGCCCAGCCCTaGCATGATCCCACCGTAATCCTGCAAAGGGAAAGCGATGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: GQIKGFLPPGIRAQP*HDPTVILQRESDDV Trigger: GACATCATCGCTTTCCCTTTGCAGGATTACGGTGGGATCATGGCAGGGCTGGGCTCGGATCCCTGGTGGAAGAAAACCCTTTATTTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS CCA 90 bp | ACTGGCAATAAGCTAACGTCCAGTAGAAGTGCTCTTCCACCATCTTaGTCACGGCTCTTGAGACGGCTCTTTCATGGGGGCCGAGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TGNKLTSSRSALPPS*SRLLRRLFHGGRGF Trigger: AAAGCCTCGGCCCCCATGAAAGAGCCGTCTCAAGAGCCGTGACCAAGATGGTGGAAGAGCACTTCTACTGGACGTTAGCTTATTGCCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR CAA 90 bp | ATGGATTTCTATCTGGGAAATCAGACCAACCCCAGGGAGCGGTGGCTCCTGAGGCCCATGATGTACTTCTaGTCACCCAAAAGCCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: MDFYLGNQTNPRERWLLRPMMYF*SPKSPA Trigger: AGCAGGGCTTTTGGGTGACAAGAAGTACATCATGGG...CCTCAGGAGCCACCGCTCCCTGGGGTTGGTCTGATTTCCCAGATAGAAATCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS GCA 90 bp | CCTTCTCCATCAGCATGTAAATCTCTTCCTCCGAGAAGCGGCCAATaGCGTGGCCGTGCATCTCCCGCTTCACAATTCCTTTTGTTATGT | + |
|
Preference number: 5 (lower is better) Translates to: PSPSACKSLPPRSGQ*RGRASPASQFLLLC Trigger: ACATAACAAAAGGAATTGTGAAGCGGGAGATGCACGGCCACGGCATTGGCCGCTTCTCGGAGGAAGAGATTTACATGCTGATGGAGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR CAA 90 bp | AGATCTCCTCCCAGCTCAAATGGATTTCTATCTGGGAAATCAGACCAACCCCAGTGCTCTTCCACCATCTaGGTCACGGCTCTTGAGACG | + |
|
Preference number: 5 (lower is better) Translates to: RSPPSSNGFLSGKSDQPQCSSTI*VTALET Trigger: CGTCTCAAGAGCCGTGACCAAGATGGTGGAAGAGCA...CTGGGGTTGGTCTGATTTCCCAGATAGAAATCCATTTGAGCTGGGAGGAGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR CAA 90 bp | CCTCCCAGCTCAAATGGATTTCTATCTGGGAAATCAGACCAACCCCAGGGAGCGTCAAGAGTGGAAAGCTaGGGTCCCATGATGTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: PPSSNGFLSGKSDQPQGASRVES*GPMMYF Trigger: GAAGTACATCATGGGACCCAAGCTTTCCACTCTTGA...CGCTCCCTGGGGTTGGTCTGATTTCCCAGATAGAAATCCATTTGAGCTGGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS CCA 90 bp | TGCTCTTCCACCATCTTGGTCACGGCTCTTGAGACGGCTCTTTCATaGGGGCCGAGGCTTTTATTTAAGTTCACTCCAAGTTTCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CSSTILVTALETALS*GPRLLFKFTPSFSS Trigger: GGAAGAGAAACTTGGAGTGAACTTAAATAAAAGCCTCGGCCCCCATGAAAGAGCCGTCTCAAGAGCCGTGACCAAGATGGTGGAAGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR CAA 90 bp | AGATCTCCTCCCAGCTCAAATGGATTTCTATCTGGGAAATCAGACCAACCCCAGCCAAGGCATCTTCCCTaGAGCAGAGAGTTTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: RSPPSSNGFLSGKSDQPQPRHLP*SREFST Trigger: GGTGGAAAACTCTCTGCTCAAGGGAAGATGCCTTGG...CTGGGGTTGGTCTGATTTCCCAGATAGAAATCCATTTGAGCTGGGAGGAGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR CAA 90 bp | CACGTACAACAGCAGCCAAGGGACATGAGCTCCTATGTCTTTTCTGATGGTATTTCTTGGTCACGGCTCTaGAGACGGCTCTTTCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: HVQQQPRDMSSYVFSDGISWSRL*RRLFHG Trigger: CCCATGAAAGAGCCGTCTCAAGAGCCGTGACCAAGA...AATACCATCAGAAAAGACATAGGAGCTCATGTCCCTTGGCTGCTGTTGTACGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR CAA 90 bp | CACGTACAACAGCAGCCAAGGGACATGAGCTCCTATGTCTTTTCTGATGGTATTATCTTCCGGGTCTCATaGAGATTGTCCACCCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: HVQQQPRDMSSYVFSDGIIFRVS*RLSTHW Trigger: CCAGTGGGTGGACAATCTCAATGAGACCCGGAAGAT...AATACCATCAGAAAAGACATAGGAGCTCATGTCCCTTGGCTGCTGTTGTACGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR CAA 90 bp | AGATCTCCTCCCAGCTCAAATGGATTTCTATCTGGGAAATCAGACCAACCCCAGCAGTACATGGCCAGGTaGATCAGCTCGCCTTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: RSPPSSNGFLSGKSDQPQQYMAR*ISSPLI Trigger: AATCAAAGGCGAGCTGATCAACCTGGCCATGTACTG...CTGGGGTTGGTCTGATTTCCCAGATAGAAATCCATTTGAGCTGGGAGGAGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS TCA 90 bp | CAGAAAGGAGACAAGCTGGGGACACCATTGTTAGGTCTTGCAAACTaGTGCAAAATAATAGCATCTTTGGAGTCGAGCTCTTGCTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QKGDKLGTPLLGLAN*CKIIASLESSSCCF Trigger: GAAACAGCAAGAGCTCGACTCCAAAGATGCTATTATTTTGCATCAGTTTGCAAGACCTAACAATGGTGTCCCCAGCTTGTCTCCTTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS-3UTR CAA 90 bp | CACGTACAACAGCAGCCAAGGGACATGAGCTCCTATGTCTTTTCTGATGGTATTAAAATAATAGCATCTTaGGAGTCGAGCTCTTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HVQQQPRDMSSYVFSDGIKIIAS*ESSSCC Trigger: ACAGCAAGAGCTCGACTCCAAAGATGCTATTATTTT...AATACCATCAGAAAAGACATAGGAGCTCATGTCCCTTGGCTGCTGTTGTACGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS GCA 90 bp | TTTCAAACAGAAAGGAGACAAGCTGGGGACACCATTGTTAGGTCTTaGAAACTGATGCAAAATAATAGCATCTTTGGAGTCGAGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FQTERRQAGDTIVRS*KLMQNNSIFGVELL Trigger: CAAGAGCTCGACTCCAAAGATGCTATTATTTTGCATCAGTTTGCAAGACCTAACAATGGTGTCCCCAGCTTGTCTCCTTTCTGTTTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS GCA 72 bp | GCTCCTCGGACCCGGCCCACCAGCCGAAGAAGGAGATaGTCTGGTTCCAGCTCAGGTCCACCACGCACGGCC | + |
|
Preference number: 6 (lower is better) Translates to: APRTRPTSRRRR*SGSSSGPPRTA Trigger: GGCCGTGCGTGGTGGACCTGAGCTGGAACCAGAGCATCTCCTTCTTCGGCTGGTGGGCCGGGTCCGAGGAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS CCA 72 bp | TCGGACCCGGCCCACCAGCCGAAGAAGGAGATGCTCTaGTTCCAGCTCAGGTCCACCACGCACGGCCTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SDPAHQPKKEML*FQLRSTTHGLD Trigger: GTCCAGGCCGTGCGTGGTGGACCTGAGCTGGAACCAGAGCATCTCCTTCTTCGGCTGGTGGGCCGGGTCCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS GCA 72 bp | AAGGGTTTTCTTCCACCAGGGATCCGAGCCCAGCCCTaGCATGATCCCACCGTAATCCTGCAAAGGGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: KGFLPPGIRAQP*HDPTVILQRES Trigger: GCTTTCCCTTTGCAGGATTACGGTGGGATCATGGCAGGGCTGGGCTCGGATCCCTGGTGGAAGAAAACCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS TCA 72 bp | CCTGAGCAGGTTACTGAAGGGACCGCCGCCACTAAGTaGCAGCATCTTCCGGGTCTCATTGAGATTGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PEQVTEGTAATK*QHLPGLIEIVH Trigger: GTGGACAATCTCAATGAGACCCGGAAGATGCTGTCACTTAGTGGCGGCGGTCCCTTCAGTAACCTGCTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS CCA 72 bp | TCTTGCTGCCCTCGCTGCTCTCCTCAGACTCATAAATaGTGTTGTCATCATCGTGGTGCCACTCGGGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SCCPRCSPQTHK*CCHHRGATRAR Trigger: TCTGGCCCGAGTGGCACCACGATGATGACAACACCATTTATGAGTCTGAGGAGAGCAGCGAGGGCAGCAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS GCA 72 bp | ATCTCTTCCTCCGAGAAGCGGCCAATGCCGTGGCCGTaGATCTCCCGCTTCACAATTCCTTTTGTTATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ISSSEKRPMPWP*ISRFTIPFVMW Trigger: CCACATAACAAAAGGAATTGTGAAGCGGGAGATGCACGGCCACGGCATTGGCCGCTTCTCGGAGGAAGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS GCA 72 bp | TCAGCATGTAAATCTCTTCCTCCGAGAAGCGGCCAATaGCGTGGCCGTGCATCTCCCGCTTCACAATTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SACKSLPPRSGQ*RGRASPASQFL Trigger: AAGGAATTGTGAAGCGGGAGATGCACGGCCACGGCATTGGCCGCTTCTCGGAGGAAGAGATTTACATGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS CCA 72 bp | AAGCTAACGTCCAGTAGAAGTGCTCTTCCACCATCTTaGTCACGGCTCTTGAGACGGCTCTTTCATGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: KLTSSRSALPPS*SRLLRRLFHGG Trigger: GCCCCCATGAAAGAGCCGTCTCAAGAGCCGTGACCAAGATGGTGGAAGAGCACTTCTACTGGACGTTAGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS TCA 72 bp | GTAGAAGTGCTCTTCCACCATCTTGGTCACGGCTCTTaGGACGGCTCTTTCATGGGGGCCGAGGCTTTTATT | + |
|
Preference number: 6 (lower is better) Translates to: VEVLFHHLGHGS*DGSFMGAEAFI Trigger: AATAAAAGCCTCGGCCCCCATGAAAGAGCCGTCTCAAGAGCCGTGACCAAGATGGTGGAAGAGCACTTCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS TCA 72 bp | CCATCTCCACATCGGAGTCAAAGAGAGAGTGTCCGGTaGAATCCGTGTCTGGGGTCCTGGAGAAACTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PSPHRSQRESVR*NPCLGSWRNCS Trigger: AGAACAGTTTCTCCAGGACCCCAGACACGGATTTCACCGGACACTCTCTCTTTGACTCCGATGTGGAGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS CCA 72 bp | CCGTGCATCTCCCGCTTCACAATTCCTTTTGTTATGTaGCACACGACCCACCTGAGCAGGTTACTGAAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PCISRFTIPFVM*HTTHLSRLLKG Trigger: TCCCTTCAGTAACCTGCTCAGGTGGGTCGTGTGCCACATAACAAAAGGAATTGTGAAGCGGGAGATGCACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS CAA 72 bp | AGTAGAAGTGCTCTTCCACCATCTTGGTCACGGCTCTaGAGACGGCTCTTTCATGGGGGCCGAGGCTTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: SRSALPPSWSRL*RRLFHGGRGFY Trigger: ATAAAAGCCTCGGCCCCCATGAAAGAGCCGTCTCAAGAGCCGTGACCAAGATGGTGGAAGAGCACTTCTACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS CAA 90 bp | CTAACGTCCAGTAGAAGTGCTCTTCCACCATCTTGGTCACGGCTCTaGAGACGGCTCTTTCATGGGGGCCGAGGCTTTTATTTAAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LTSSRSALPPSWSRL*RRLFHGGRGFYLSS Trigger: TGAACTTAAATAAAAGCCTCGGCCCCCATGAAAGAGCCGTCTCAAGAGCCGTGACCAAGATGGTGGAAGAGCACTTCTACTGGACGTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS CAA 90 bp | GCCTGTGCCAAGTGTCCAAAGACAGTGGCATCAAGAGTGGAAAGCTaGGGTCCCATGATGTACTTCTTGTCACCCAAAAGCCCTGCTAAA | + |
|
Preference number: 6 (lower is better) Translates to: ACAKCPKTVASRVES*GPMMYFLSPKSPAK Trigger: TTTAGCAGGGCTTTTGGGTGACAAGAAGTACATCATGGGACCCAAGCTTTCCACTCTTGATGCCACTGTCTTTGGACACTTGGCACAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS GCA 72 bp | AATCCAGCATGGGTGTGTGAGTCTTGCTGCCCTCGCTaGTCTCCTCAGACTCATAAATGGTGTTGTCATCAT | + |
|
Preference number: 6 (lower is better) Translates to: NPAWVCESCCPR*SPQTHKWCCHH Trigger: ATGATGACAACACCATTTATGAGTCTGAGGAGAGCAGCGAGGGCAGCAAGACTCACACACCCATGCTGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS CCA 72 bp | ACCATCTTGGTCACGGCTCTTGAGACGGCTCTTTCATaGGGGCCGAGGCTTTTATTTAAGTTCACTCCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: TILVTALETALS*GPRLLFKFTPS Trigger: ACTTGGAGTGAACTTAAATAAAAGCCTCGGCCCCCATGAAAGAGCCGTCTCAAGAGCCGTGACCAAGATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS TCA 72 bp | AGACAGTGGCATCAAGAGTGGAAAGCTTGGGTCCCATaGTGTACTTCTTGTCACCCAAAAGCCCTGCTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: RQWHQEWKAWVP*CTSCHPKALLK Trigger: CTTTAGCAGGGCTTTTGGGTGACAAGAAGTACATCATGGGACCCAAGCTTTCCACTCTTGATGCCACTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||
| CDS TCA 72 bp | GACAAGCTGGGGACACCATTGTTAGGTCTTGCAAACTaGTGCAAAATAATAGCATCTTTGGAGTCGAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: DKLGTPLLGLAN*CKIIASLESSS Trigger: AGAGCTCGACTCCAAAGATGCTATTATTTTGCATCAGTTTGCAAGACCTAACAATGGTGTCCCCAGCTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029908.8 |
||