RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAT1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000070047

Ensembl transcript IDs: ENSMUST00000098796.10, ENSMUST00000186342.3, ENSMUST00000189017.8, ENSMUST00000191428.7, ENSMUST00000215588.2

Found 1071 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGTCAGTTAGGACGCTGGAAATGGCTAACATGTCAAGAGGCTTGTaGCTCCGTGCAGCCACGCCTACCGCGGCTCACCGAGAAGCGGCC +
Preference number: 1 (lower is better)
Translates to: QSVRTLEMANMSRGL*LRAATPTAAHREAA
Trigger: GGCCGCTTCTCGGTGAGCCGCGGTAGGCGTGGCTGCACGGAGTCACAAGCCTCTTGACATGTTAGCCATTTCCAGCGTCCTAACTGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
3UTR CCA 90 bp GGGGATGAAAACCCGGTCGATTACAGTCAGTTAGGACGCTGGAAATaGCTAACATGTCAAGAGGCTTGTGACTCCGTGCAGCCACGCCTA +
Preference number: 1 (lower is better)
Translates to: GDENPVDYSQLGRWK*LTCQEACDSVQPRL
Trigger: TAGGCGTGGCTGCACGGAGTCACAAGCCTCTTGACATGTTAGCCATTTCCAGCGTCCTAACTGACTGTAATCGACCGGGTTTTCATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
3UTR-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACATGTCAAGAGGCTTGTaGCTCCGTGCAGCCACGCCT +
Preference number: 2 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHMSRGL*LRAATP
Trigger: AGGCGTGGCTGCACGGAGTCACAAGCCTCTTGACAT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
3UTR-3UTR TCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAATGTCAAGAGGCTTGTaGCTCCGTGCAGCCACGCCT +
Preference number: 2 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEMSRGL*LRAATP
Trigger: AGGCGTGGCTGCACGGAGTCACAAGCCTCTTGACAT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
3UTR-3UTR CCA 90 bp TGTGTGTTCGTCAATAGCCTCGTAATTGGGGAACTCTTGTATGTCTGGCAGAGGTCTGATGTATCCCAGTaGTACCCTCTTGGTTTGCTG +
Preference number: 2 (lower is better)
Translates to: CVFVNSLVIGELLYVWQRSDVSQ*YPLGLL
Trigger: CAGCAAACCAAGAGGGTACCACTGGGATACATCAGA...CCTCTGCCAGACATACAAGAGTTCCCCAATTACGAGGCTATTGACGAACACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186342.3
3UTR-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAATGTCAAGAGGCTTGTaGCTCCGTGCAGCCACGCCT +
Preference number: 2 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKMSRGL*LRAATP
Trigger: AGGCGTGGCTGCACGGAGTCACAAGCCTCTTGACAT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
3UTR-3UTR TCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGGATGGGACAGGGGATaGAAACCCGGTCGATTACAG +
Preference number: 2 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEGWDRG*KPGRLQ
Trigger: CTGTAATCGACCGGGTTTTCATCCCCTGTCCCATCC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
3UTR-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGCATCTCTAGGTTCATaGAAGTCCAGGCACTTTGGG +
Preference number: 2 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKASLGS*KSRHFG
Trigger: CCCAAAGTGCCTGGACTTTCATGAACCTAGAGATGC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
3UTR TCA 72 bp AGGACGCTGGAAATGGCTAACATGTCAAGAGGCTTGTaGCTCCGTGCAGCCACGCCTACCGCGGCTCACCGA +
Preference number: 3 (lower is better)
Translates to: RTLEMANMSRGL*LRAATPTAAHR
Trigger: TCGGTGAGCCGCGGTAGGCGTGGCTGCACGGAGTCACAAGCCTCTTGACATGTTAGCCATTTCCAGCGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
3UTR-3UTR CAA 90 bp AGTCAGTATCGATGGCGTTTGGATCAGCCGAGTAGAGGGGTGTGTGTTCGTCAATGGTACCCTCTTGGTTaGCTGAGGTCAGGAGCAGCC +
Preference number: 3 (lower is better)
Translates to: SQYRWRLDQPSRGVCVRQWYPLG*LRSGAA
Trigger: GGCTGCTCCTGACCTCAGCAAACCAAGAGGGTACCA...TTGACGAACACACACCCCTCTACTCGGCTGATCCAAACGCCATCGATACTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186342.3
3UTR TCA 72 bp TTGTATGTCTGGCAGAGGGACACTTGGCATCCAGTCTaGTGTATCCCAGTGGTACCCTCTTGGTTTGCTGAG +
Preference number: 3 (lower is better)
Translates to: LYVWQRDTWHPV*CIPVVPSWFAE
Trigger: CTCAGCAAACCAAGAGGGTACCACTGGGATACATCAGACTGGATGCCAAGTGTCCCTCTGCCAGACATACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186342.3
3UTR CCA 72 bp AACCCGGTCGATTACAGTCAGTTAGGACGCTGGAAATaGCTAACATGTCAAGAGGCTTGTGACTCCGTGCAG +
Preference number: 3 (lower is better)
Translates to: NPVDYSQLGRWK*LTCQEACDSVQ
Trigger: CTGCACGGAGTCACAAGCCTCTTGACATGTTAGCCATTTCCAGCGTCCTAACTGACTGTAATCGACCGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
3UTR-3UTR CAA 90 bp AATTGGGGAACTCTTGTATGTCTGGCAGAGGGACACTTGGCATCCAGTCTGATGGTGTCAACGACAGCGTaGACAAGGTGTATTACAGTC +
Preference number: 3 (lower is better)
Translates to: NWGTLVCLAEGHLASSLMVSTTA*TRCITV
Trigger: GACTGTAATACACCTTGTCAACGCTGTCGTTGACAC...CATCAGACTGGATGCCAAGTGTCCCTCTGCCAGACATACAAGAGTTCCCCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186342.3
3UTR TCA 72 bp AGTCTGATGTATCCCAGTGGTACCCTCTTGGTTTGCTaGGGTCAGGAGCAGCCAAAGATTCTTCTTTATTCA +
Preference number: 3 (lower is better)
Translates to: SLMYPSGTLLVC*GQEQPKILLYS
Trigger: TGAATAAAGAAGAATCTTTGGCTGCTCCTGACCTCAGCAAACCAAGAGGGTACCACTGGGATACATCAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186342.3
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATCCCCGTTGGCACCCTaGTCACAGTCCTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQASPLAP*SQSSTV
Trigger: CACCGTGGAGGACTGTGATCAGGGTGCCAACGGGGA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAGCCACTGCCCGTCGTTaGCCTGAATGCTCTGGACGG +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAATARR*PECSGR
Trigger: CCGTCCAGAGCATTCAGGTCAACGACGGGCAGTGGC...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAAATCCATGCAGCCCCTaGAGCCACTGGCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQANPCSP*SHWPPG
Trigger: CCCAGGTGGCCAGTGGCTTCAGGGGCTGCATGGATT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAACCGGGGTTCCTCTGTaGCTTGGTCCCTGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQATGVPL*LGPWPR
Trigger: TCGAGGCCAGGGACCAAGCCACAGAGGAACCCCGGT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACGACCGACGTCCCTTTaGCAGCGCTGGACCCGATGT +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQARPTSL*QRWTRC
Trigger: ACATCGGGTCCAGCGCTGCCAAAGGGACGTCGGTCG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GGCGTTTGGATCAGCCGAGTAGAGGGGTGTGTGTTCGTCAATAGCCTCGTAATTCGGGCACTGTATGGCTaGGAGGGCTTTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GVWISRVEGCVFVNSLVIRALYG*EGFSSR
Trigger: CCTGGAGGAAAAGCCCTCCCAGCCATACAGTGCCCG...AATTACGAGGCTATTGACGAACACACACCCCTCTACTCGGCTGATCCAAACGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186342.3
CDS-3UTR CCA 90 bp GTCAGTATCGATGGCGTTTGGATCAGCCGAGTAGAGGGGTGTGTGTTCGTCAATCTCCCGGGCACTGTATaGCTGGGAGGGCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: VSIDGVWISRVEGCVFVNLPGTV*LGGLFL
Trigger: GAGGAAAAGCCCTCCCAGCCATACAGTGCCCGGGAG...ATTGACGAACACACACCCCTCTACTCGGCTGATCCAAACGCCATCGATACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186342.3
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTCCCCGTTGGCACCCTaGTCACAGTCCTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHSPLAP*SQSSTV
Trigger: CACCGTGGAGGACTGTGATCAGGGTGCCAACGGGGA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACACTTGCAGCACAACTaGGCCCACGGCTGCCGATTC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAHLQHN*AHGCRF
Trigger: GAATCGGCAGCCGTGGGCTCAGTTGTGCTGCAAGTG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACAGCACAATAGCCGCCTaGCAGGACCTCCCACCTCCG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHSTIAA*QDLPPP
Trigger: CGGAGGTGGGAGGTCCTGTCAGGCGGCTATTGTGCT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAGAGCCGCATCCTCACTaGCCACGGTGGTGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAEPHPH*PRWCRC
Trigger: ACACCTACACCACCGTGGTCAGTGAGGATGCGGCTC...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGCCACTGCCCGTCGTTaGCCTGAATGCTCTGGACGG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHATARR*PECSGR
Trigger: CCGTCCAGAGCATTCAGGTCAACGACGGGCAGTGGC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATGCCCGTGTGCGGCGTaGTCGCTGATTCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQACPCAA*SLILAS
Trigger: TGAAGCCAGAATCAGCGAGCACGCCGCACACGGGCA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGACTTCCCGGCGGTATaGCAAGCCCCAGTCAGACGC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHDFPAV*QAPVRR
Trigger: GCGTCTGACTGGGGCTTGCCATACCGCCGGGAAGTC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCGACCGACGTCCCTTTaGCAGCGCTGGACCCGATGT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHRPTSL*QRWTRC
Trigger: ACATCGGGTCCAGCGCTGCCAAAGGGACGTCGGTCG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCAGTGGCCTGCACTCTaGTCAGCGGTGTCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHQWPAL*SAVSQA
Trigger: AGCCTGGGACACCGCTGACCAGAGTGCAGGCCACTG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATGGGAGTGTAGGAAATaGGACGGACCGGCACCTGGG +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAWECRK*DGPAPG
Trigger: CCCAGGTGCCGGTCCGTCCCATTTCCTACACTCCCA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GTAATAGTCAGTATCGATGGCGTTTGGATCAGCCGAGTAGAGGGGTGTGTGTTCTGGGAGTGTAGGAAATaGGACGGACCGGCACCTGGG +
Preference number: 4 (lower is better)
Translates to: VIVSIDGVWISRVEGCVFWECRK*DGPAPG
Trigger: CCCAGGTGCCGGTCCGTCCCATTTCCTACACTCCCA...GAACACACACCCCTCTACTCGGCTGATCCAAACGCCATCGATACTGACTATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186342.3
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACGGGCACTGTATGGCTaGGAGGGCTTTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQARALYG*EGFSSR
Trigger: CCTGGAGGAAAAGCCCTCCCAGCCATACAGTGCCCG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACTCCCGGGCACTGTATaGCTGGGAGGGCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQALPGTV*LGGLFL
Trigger: GAGGAAAAGCCCTCCCAGCCATACAGTGCCCGGGAG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATGTCGGCCACCGTGGTaGATTTCCCATCTGTCACGC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQACRPPW*ISHLSR
Trigger: GCGTGACAGATGGGAAATTCACCACGGTGGCCGACA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACACGAAATGCCCGTGTaGGGCGTGCTCGCTGATTCT +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAHEMPV*GVLADS
Trigger: AGAATCAGCGAGCACGCCGCACACGGGCATTTCGTG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATCTGTGGCAGAGACCTaGATGACCAGCTTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQASVAET*MTSFPG
Trigger: TCCCGGGAAGCTGGTCATGCAGGTCTCTGCCACAGA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATGTGTGCAATCAGCTTaGCCCCCGTGCTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQACVQSA*PPCWRQ
Trigger: CTGTCTCCAGCACGGGGGGCAAGCTGATTGCACACA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGGACGCCCAGGATGTTaGGTAGGGCTCGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHGRPGC*VGLAGS
Trigger: ACTTCCAGCGAGCCCTACGCAACATCCTGGGCGTCC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AGTCAGTATCGATGGCGTTTGGATCAGCCGAGTAGAGGGGTGTGTGTTCGTCAAAAGGAGCTAAGCGACTaGACCTCAGACAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SQYRWRLDQPSRGVCVRQKELSD*TSDRLS
Trigger: GGAGAGCCTGTCTGAGGTGCAGTCGCTTAGCTCCTT...TTGACGAACACACACCCCTCTACTCGGCTGATCCAAACGCCATCGATACTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186342.3
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACCTTCAGGAGCACGGTaGAGAACAACCGGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAPSGAR*RTTGVP
Trigger: AGGAACCCCGGTTGTTCTCCACCGTGCTCCTGAAGG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACTGTGTCTGCATCAGTaGCCTGCACTCTGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQALCLHQ*PALWSA
Trigger: CGCTGACCAGAGTGCAGGCCACTGATGCAGACACAG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACCCATGGTGGACAGGTaGGCATGTCCCGTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAPMVDR*ACPVFA
Trigger: TGCAAAGACGGGACATGCCCACCTGTCCACCATGGG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTCTGACAGGGGCTGCTaGAGCAGTCTTCTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHSDRGC*SSLLWR
Trigger: CCGCCACAGAAGACTGCTCCAGCAGCCCCTGTCAGA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTACAGCCCCCTGCACTaGCACACAAAGCCGCCGTTG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHYSPLH*HTKPPL
Trigger: CAACGGCGGCTTTGTGTGCCAGTGCAGGGGGCTGTA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTGGGAGTGTAGGAAATaGGACGGACCGGCACCTGGG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHWECRK*DGPAPG
Trigger: CCCAGGTGCCGGTCCGTCCCATTTCCTACACTCCCA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCTCCCGGGCACTGTATaGCTGGGAGGGCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHLPGTV*LGGLFL
Trigger: GAGGAAAAGCCCTCCCAGCCATACAGTGCCCGGGAG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAAAGTGGCCTTCTCCGTaGTCCAGGAGGCTGTATCTC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAKWPSP*SRRLYL
Trigger: GAGATACAGCCTCCTGGATCACGGAGAAGGCCACTT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACATTGTCAGCAACAGTaGCAGCGATACGCACGGAGG +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAHCQQQ*QRYARR
Trigger: CCTCCGTGCGTATCGCTGTCACTGTTGCTGACAATG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATCACCGTGGTTGTGTTaGCTCTGGGTGGATTGCCGT +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQASPWLC*LWVDCR
Trigger: ACGGCAATCCACCCAGAGTCAACACAACCACGGTGA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAACCCTCTTGGTTTGCTaGGGTCAGGAGCAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQATLLVC*GQEQPK
Trigger: CTTTGGCTGCTCCTGACCTCAGCAAACCAAGAGGGT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189017.8
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCACGAAATGCCCGTGTaGGGCGTGCTCGCTGATTCT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHHEMPV*GVLADS
Trigger: AGAATCAGCGAGCACGCCGCACACGGGCATTTCGTG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTCTGTGGCAGAGACCTaGATGACCAGCTTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHSVAET*MTSFPG
Trigger: TCCCGGGAAGCTGGTCATGCAGGTCTCTGCCACAGA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAGGGCTCGCTGGAAGTTaGGCCAGTAGTCACCAACAA +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAGLAGS*ASSHQQ
Trigger: TTGTTGGTGACTACTGGCGCAACTTCCAGCGAGCCC...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTGGGGTTCGGAGGGCTaGAGGCTGACGATCTGTATG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHWGSEG*RLTICM
Trigger: CATACAGATCGTCAGCCTGCAGCCCTCCGAACCCCA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAAGTAAGACGTCCAGATaGGAATGGGGTTCGGAGGGC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQASKTSR*EWGSEG
Trigger: GCCCTCCGAACCCCATTCGCATCTGGACGTCTTACT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACCAGCTTGGCGTAATTaGCCTCCACTTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAPAWRN*PPLPGT
Trigger: TGTCCCTGGAAGTGGAGGGCAATTACGCCAAGCTGG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAAAGGAGCTAAGCGACTaGACCTCAGACAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAKELSD*TSDRLS
Trigger: GGAGAGCCTGTCTGAGGTGCAGTCGCTTAGCTCCTT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAACGCTATCTCCCCGTTaGCACCCTGATCACAGTCCT +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQATLSPR*HPDHSP
Trigger: AGGACTGTGATCAGGGTGCCAACGGGGAGATAGCGT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAGGTTCCTCTGTGGCTTaGTCCCTGGCCTCGATCTTT +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAGSSVA*SLASIF
Trigger: AAAGATCGAGGCCAGGGACCAAGCCACAGAGGAACC...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGCTCCGAGGACGGCTTaGGTTTGGAGATCCACTCGA +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHAPRTA*VWRSTR
Trigger: TCGAGTGGATCTCCAAACCCAAGCCGTCCTCGGAGC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATTCTGCAGAGAAAGCTaGACTCCCTCCGTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAFCRES*TPSVLG
Trigger: GCCAAGGACGGAGGGAGTCCAGCTTTCTCTGCAGAA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATCTGGGCTGTTGGCTTaGATATGGACCACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQASGLLA*IWTTGL
Trigger: CAGCCCAGTGGTCCATATCCAAGCCAACAGCCCAGA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCTGTGTCTGCATCAGTaGCCTGCACTCTGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHLCLHQ*PALWSA
Trigger: CGCTGACCAGAGTGCAGGCCACTGATGCAGACACAG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACCCGCACAGAGCTTCTaGAACACTTCCAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAPAQSF*NTSRIL
Trigger: GAGGATCCTGGAAGTGTTCCAGAAGCTCTGTGCGGG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCCCATGGTGGACAGGTaGGCATGTCCCGTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHPMVDR*ACPVFA
Trigger: TGCAAAGACGGGACATGCCCACCTGTCCACCATGGG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATGCTTTGTCCCTTGCTaGCGGAGGTGGCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQACFVPC*RRWPPK
Trigger: TTTTGGTGGCCACCTCCGCCAGCAAGGGACAAAGCA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCTCTGGAGGCAATGGTaGCAGTTCATCGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHLWRQW*QFIGCR
Trigger: CCTGCACCCGATGAACTGCCACCATTGCCTCCAGAG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAGAACTCTGGAGGCAATaGTGGCAGTTCATCGGGTGC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAELWRQ*WQFIGC
Trigger: GCACCCGATGAACTGCCACCATTGCCTCCAGAGTTC...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAGTTTCTTTGATACCCTaGGGGGTAGGGGGTGTAGGG +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAVSLIP*GVGGVG
Trigger: CCCTACACCCCCTACCCCCCAGGGTATCAAAGAAAC...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAAATATTCTGCCTGCGTaGAAACGGGCGGGTTGTCGT +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQANILPA*KRAGCR
Trigger: ACGACAACCCGCCCGTTTTCACGCAGGCAGAATATT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGTGCGGCGTGCTCGCTaGTTCTGGCTTCATAAACCT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHVRRAR*FWLHKP
Trigger: AGGTTTATGAAGCCAGAATCAGCGAGCACGCCGCAC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAGAACCTCCGTCCCAATaGCAATGTCCTCAGACACAC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAEPPSQ*QCPQTH
Trigger: GTGTGTCTGAGGACATTGTCATTGGGACGGAGGTTC...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATTCTCCCCTAAAGCCTaGGTCACACTGACAGACAGC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAFSPKA*VTLTDS
Trigger: GCTGTCTGTCAGTGTGACTCAGGCTTTAGGGGAGAA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACTCTTGTATGTCTGGCAGAGGGACACTTGGCATCCAGTCTGATGTATCCCAGGTCATCACAGGACTCTaGCTGGAAGGAGCTAAGCGA +
Preference number: 4 (lower is better)
Translates to: NSCMSGRGTLGIQSDVSQVITGL*LEGAKR
Trigger: TCGCTTAGCTCCTTCCAGTCAGAGTCCTGTGATGAC...CTGGGATACATCAGACTGGATGCCAAGTGTCCCTCTGCCAGACATACAAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186342.3
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACGTAGTCGCTCATCATaGCCTCAGACTCCACTTCAC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQARSRSS*PQTPLH
Trigger: GTGAAGTGGAGTCTGAGGTCATGATGAGCGACTACG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTCCAGAGCTGTCACTTaGAGCACAACTGAGCCCACG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHSRAVT*STTEPT
Trigger: CGTGGGCTCAGTTGTGCTGCAAGTGACAGCTCTGGA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTGGACCACTGGGCTGTaGATCTGGATGTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHWTTGL*IWMFSG
Trigger: CCCAGAGAACATCCAGATGCACAGCCCAGTGGTCCA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCACTCAACGAAGGCGTaGCTCCATCAGTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHHSTKA*LHQWLP
Trigger: TGGAAGCCACTGATGGAGGCACGCCTTCGTTGAGTG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCCAGCTTGGCGTAATTaGCCTCCACTTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHPAWRN*PPLPGT
Trigger: TGTCCCTGGAAGTGGAGGGCAATTACGCCAAGCTGG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACAAGGAGCTAAGCGACTaGACCTCAGACAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHKELSD*TSDRLS
Trigger: GGAGAGCCTGTCTGAGGTGCAGTCGCTTAGCTCCTT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAGATGATGGCGTAGGTTaGGTCCTTGTCCAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQADDGVG*VLVQLR
Trigger: TCTGAGCTGGACAAGGACCCAACCTACGCCATCATC...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCCACCACCGTTGTGTTaGTGGACAAACCGGCCATGT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHPPPLC*WTNRPC
Trigger: ACATGGCCGGTTTGTCCACCAACACAACGGTGGTGG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAAGACGAGCAGAGCATTaGATTCCCTGTCAGCATCCG +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQARRAEH*IPCQHP
Trigger: CGGATGCTGACAGGGAATCCAATGCTCTGCTCGTCT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTCTGGGCTGTTGGCTTaGATATGGACCACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHSGLLA*IWTTGL
Trigger: CAGCCCAGTGGTCCATATCCAAGCCAACAGCCCAGA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAAGGCTGTACATGACTTaGCCGTTGGCTCCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQARLYMT*PLAPES
Trigger: AGACTCAGGAGCCAACGGCCAAGTCATGTACAGCCT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTGTGTTGACTCTGGGTaGATTGCCGTTGTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHCVDSG*IAVVGS
Trigger: GCTGCCGACAACGGCAATCCACCCAGAGTCAACACA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAAAGATGGCAGGAGGGTaGATGCTTTCCTCGATCACC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAKMAGG*MLSSIT
Trigger: GGTGATCGAGGAAAGCATCCACCCTCCTGCCATCTT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTCTCCAGCGGCAAGATaGCAGGAGGGTGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHSPAAR*QEGGCF
Trigger: AAAGCATCCACCCTCCTGCCATCTTGCCGCTGGAGA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAGTGTCATACACGTCCTaGTCGGTGGCGTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAVSYTS*SVAWIF
Trigger: AAAGATCCACGCCACCGACCAGGACGTGTATGACAC...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGATTCGCGAAGCGAATaGCGACGGTGTGGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHDSRSE*RRCGSA
Trigger: TGCTGAACCACACCGTCGCCATTCGCTTCGCGAATC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATCACGAAACTCAGTCTaGCCGTGCTGTGAGTGGACA +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQASRNSV*PCCEWT
Trigger: TGTCCACTCACAGCACGGCCAGACTGAGTTTCGTGA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACACACTGCTGTTCTGTaGTGTCGGGGAGTCACGAAA +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAHTAVL*CRGVTK
Trigger: TTTCGTGACTCCCCGACACCACAGAACAGCAGTGTG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAAGTATCGATGGCGTTTaGATCAGCCGAGTAGAGGGG +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQASIDGV*ISRVEG
Trigger: CCCCTCTACTCGGCTGATCCAAACGCCATCGATACT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGTAGGGTTCTCTACATaGACTGTTCTCGCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHVGFST*TVLASA
Trigger: GGCGCTGGCGAGAACAGTCCATGTAGAGAACCCTAC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGTTTCTTTGATACCCTaGGGGGTAGGGGGTGTAGGG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHVSLIP*GVGGVG
Trigger: CCCTACACCCCCTACCCCCCAGGGTATCAAAGAAAC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCCAGTGGTACCCTCTTaGTTTGCTGAGGTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHPVVPS*FAEVRS
Trigger: GCTCCTGACCTCAGCAAACCAAGAGGGTACCACTGG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189017.8
3UTR CAA 72 bp AATTGGGGAACTCTTGTATGTCTGGCAGAGGGACACTaGGCATCCAGTCTGATGTATCCCAGTGGTACCCTC +
Preference number: 4 (lower is better)
Translates to: NWGTLVCLAEGH*ASSLMYPSGTL
Trigger: GAGGGTACCACTGGGATACATCAGACTGGATGCCAAGTGTCCCTCTGCCAGACATACAAGAGTTCCCCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186342.3
CDS-3UTR TCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACCTCGCACTGCAAGTTaGCCGGCTTGCGACTGGCAG +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEPRTAS*PACDWQ
Trigger: CTGCCAGTCGCAAGCCGGTCAACTTGCAGTGCGAGG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGTATCTCACCTGACTTaGCTGACCCACATCGGGATC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHVSHLT*LTHIGI
Trigger: GATCCCGATGTGGGTCAGTCAAGTCAGGTGAGATAC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACGAGGATTTTCACGATaGCTCTGGCAATGGTGGATC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQARGFSR*LWQWWI
Trigger: GATCCACCATTGCCAGAGTCATCGTGAAAATCCTCG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACAATATTCTGCCTGCGTaGAAACGGGCGGGTTGTCGT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHNILPA*KRAGCR
Trigger: ACGACAACCCGCCCGTTTTCACGCAGGCAGAATATT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAAGACACTTCGTACAGTaGCTTAGAGAAGACAGGGGG +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQARHFVQ*LREDRG
Trigger: CCCCCTGTCTTCTCTAAGTCACTGTACGAAGTGTCT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGAACCTCCGTCCCAATaGCAATGTCCTCAGACACAC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHEPPSQ*QCPQTH
Trigger: GTGTGTCTGAGGACATTGTCATTGGGACGGAGGTTC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTGTAGGTGTCTTGGCTaGACACGGGGCTGTTATCGT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHCRCLG*TRGCYR
Trigger: ACGATAACAGCCCCGTGTTCAGCCAAGACACCTACA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACGTGGATCTTTCCTATaGCCCCACCTGAGTATTCCT +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQARGSFL*PHLSIP
Trigger: AGGAATACTCAGGTGGGGTCATAGGAAAGATCCACG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAAATCCATGCAGCCCCTaGAGCCACTGGCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSENPCSP*SHWPPG
Trigger: CCCAGGTGGCCAGTGGCTTCAGGGGCTGCATGGATT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTTCTCCCCTAAAGCCTaGGTCACACTGACAGACAGC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHFSPKA*VTLTDS
Trigger: GCTGTCTGTCAGTGTGACTCAGGCTTTAGGGGAGAA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGCTTCTTCTTCCGACTaGTCATCTTCCGGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHASSSD*SSSGRG
Trigger: TCCTCTGCCGGAAGATGATCAGTCGGAAGAAGAAGC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGTCATCACAGGACTCTaGCTGGAAGGAGCTAAGCGA +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHVITGL*LEGAKR
Trigger: TCGCTTAGCTCCTTCCAGTCAGAGTCCTGTGATGAC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACACTTGGCATCCAGTCTaGTGTATCCCAGTGGTACCC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHTWHPV*CIPVVP
Trigger: GGGTACCACTGGGATACATCAGACTGGATGCCAAGT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAGGTCTAAGATGTAGATaGCCATCTTTCTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAGLRCR*PSFWGG
Trigger: GCCACCCCAGAAAGATGGGCATCTACATCTTAGACC...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAACTGGTGAACCACGGTaGGTGGTCATTCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQATGEPR*VVILVT
Trigger: AGTGACAAGAATGACCACGCACCGTGGTTCACCAGT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACTCTGTACTCCTGGCTaGAGTTACAGTGATAGGAGC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQALCTPG*SYSDRS
Trigger: GCTCCTATCACTGTAACTGCAGCCAGGAGTACAGAG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AATTGGGGAACTCTTGTATGTCTGGCAGAGGGACACTTGGCATCCAGTCTGATGTCGAGTCGCTTGGAATaGTGGGAGTGTAGGAAATGG +
Preference number: 4 (lower is better)
Translates to: NWGTLVCLAEGHLASSLMSSRLE*WECRKW
Trigger: CCATTTCCTACACTCCCAGCATTCCAAGCGACTCGA...CATCAGACTGGATGCCAAGTGTCCCTCTGCCAGACATACAAGAGTTCCCCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186342.3
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACAGACGCTGTAGGAGGTaGGGGAGAATAAGGGCCTTA +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHRRCRR*GRIRAL
Trigger: TAAGGCCCTTATTCTCCCCCACCTCCTACAGCGTCT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACGATGCTGGTCCTTATaGCTGTGTTTTCCGGCAAAG +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQARCWSL*LCFPAK
Trigger: CTTTGCCGGAAAACACAGCCATAAGGACCAGCATCG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTCTCTGCCAACATTTTaGCAACACCGGTCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHSLPTF*QHRSPR
Trigger: GCGAGGAGACCGGTGTTGCCAAAATGTTGGCAGAGA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCTTCCACATAGCAAGTaGAAGACAGGGACACGGGCT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHLPHSK*KTGTRA
Trigger: AGCCCGTGTCCCTGTCTTCCACTTGCTATGTGGAAG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAGTGAACCACGGTGCGTaGTCATTCTTGTCACTGACA +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAVNHGA*SFLSLT
Trigger: TGTCAGTGACAAGAATGACCACGCACCGTGGTTCAC...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACAGACGAGCAGAGCATTaGATTCCCTGTCAGCATCCG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHRRAEH*IPCQHP
Trigger: CGGATGCTGACAGGGAATCCAATGCTCTGCTCGTCT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAAACACGCCCGACGTGTaGCTGATTTTAAATCTGCGG +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQANTPDV*LILNLR
Trigger: CCGCAGATTTAAAATCAGCCACACGTCGGGCGTGTT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACAGGCTGTACATGACTTaGCCGTTGGCTCCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHRLYMT*PLAPES
Trigger: AGACTCAGGAGCCAACGGCCAAGTCATGTACAGCCT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATGTCCTCAGACACACTaGCGCCATATTCACGGTACT +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQACPQTH*RHIHGT
Trigger: AGTACCGTGAATATGGCGCCAGTGTGTCTGAGGACA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACAAGATGGCAGGAGGGTaGATGCTTTCCTCGATCACC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHKMAGG*MLSSIT
Trigger: GGTGATCGAGGAAAGCATCCACCCTCCTGCCATCTT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGTGTCATACACGTCCTaGTCGGTGGCGTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHVSYTS*SVAWIF
Trigger: AAAGATCCACGCCACCGACCAGGACGTGTATGACAC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACAGGGAAGTCCTCTGGTaGGGGTGGAAAGTCACTTTC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHREVLW*GWKVTF
Trigger: GAAAGTGACTTTCCACCCCCACCAGAGGACTTCCCT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCGGCGGGGTAGAAATTaGGCAGGTACTGATTCAGGT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHRRGRN*AGTDSG
Trigger: ACCTGAATCAGTACCTGCCCAATTTCTACCCCGCCG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAAGGCGTACACGGACATaGGCATGTTTTCTATGGTGG +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQARRTRT*ACFLWW
Trigger: CCACCATAGAAAACATGCCCATGTCCGTGTACGCCT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGTCACCTCTTCGAAGTaGCCGTCGTCCCCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEVTSSK*PSSPLS
Trigger: CGAGAGCGGGGACGACGGCCACTTCGAAGAGGTGAC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
3UTR CAA 72 bp TGTGTGTTCGTCAATAGCCTCGTAATTGGGGAACTCTaGTATGTCTGGCAGAGGGACACTTGGCATCCAGTC +
Preference number: 4 (lower is better)
Translates to: CVFVNSLVIGEL*YVWQRDTWHPV
Trigger: GACTGGATGCCAAGTGTCCCTCTGCCAGACATACAAGAGTTCCCCAATTACGAGGCTATTGACGAACACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186342.3
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACCGCATCCGTGGCACTaGCTCTTGCGATGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKPHPWH*LLRCWS
Trigger: GGACCAGCATCGCAAGAGTCAGTGCCACGGATGCGG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGCCGCATCCGTGGCACTaGCTCTTGCGATGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRPHPWH*LLRCWS
Trigger: GGACCAGCATCGCAAGAGTCAGTGCCACGGATGCGG...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGCTTGGCCAGGCTGCTaGCCCCACTGCTACCGTACA +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKAWPGC*PHCYRT
Trigger: TGTACGGTAGCAGTGGGGTCAGCAGCCTGGCCAAGC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGCTTGGCCAGGCTGCTaGCCCCACTGCTACCGTACA +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRAWPGC*PHCYRT
Trigger: TGTACGGTAGCAGTGGGGTCAGCAGCCTGGCCAAGC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTCCCCGTTGGCACCCTaGTCACAGTCCTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRSPLAP*SQSSTV
Trigger: CACCGTGGAGGACTGTGATCAGGGTGCCAACGGGGA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACCTCGCACTGCAAGTTaGCCGGCTTGCGACTGGCAG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKPRTAS*PACDWQ
Trigger: CTGCCAGTCGCAAGCCGGTCAACTTGCAGTGCGAGG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCTATGTAGACCTCTATaGAGGACGACAGAGGCACCA +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHLCRPL*RTTEAP
Trigger: TGGTGCCTCTGTCGTCCTTCATAGAGGTCTACATAG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCGAGGATTTTCACGATaGCTCTGGCAATGGTGGATC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHRGFSR*LWQWWI
Trigger: GATCCACCATTGCCAGAGTCATCGTGAAAATCCTCG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACACTTGCAGCACAACTaGGCCCACGGCTGCCGATTC +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEHLQHN*AHGCRF
Trigger: GAATCGGCAGCCGTGGGCTCAGTTGTGCTGCAAGTG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACCCTTGCACTGTCAATaGATACATGGGCAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAPLHCQ*IHGQCF
Trigger: GAAACACTGCCCATGTATTCATTGACAGTGCAAGGG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACTCGCTGATGAATCCTaGATATTCTGCCTGCGTGAA +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQALADES*IFCLRE
Trigger: TTCACGCAGGCAGAATATTCAGGATTCATCAGCGAG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACAGACACTTCGTACAGTaGCTTAGAGAAGACAGGGGG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHRHFVQ*LREDRG
Trigger: CCCCCTGTCTTCTCTAAGTCACTGTACGAAGTGTCT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAAAGGGTCTCCGTCCGTaGTACTGTAGAACACTTTCA +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAKGLRP*YCRTLS
Trigger: TGAAAGTGTTCTACAGTATCACGGACGGAGACCCTT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATCTGTGGCTCGAACTTaGAGGACAGGTGTTCCAATT +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQASVART*RTGVPI
Trigger: AATTGGAACACCTGTCCTTCAAGTTCGAGCCACAGA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTTGGTTGAGCGAAACTaGGGTGCGTTGTCATTGTCG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHLVERN*GALSLS
Trigger: CGACAATGACAACGCACCTCAGTTTCGCTCAACCAA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAGCCAGGATGGAAAACTaGTACCACTTAGTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAARMEN*YHLVVS
Trigger: TGAGACCACTAAGTGGTATCAGTTTTCCATCCTGGC...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAAGCACAATAGCCGCCTaGCAGGACCTCCCACCTCCG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKSTIAA*QDLPPP
Trigger: CGGAGGTGGGAGGTCCTGTCAGGCGGCTATTGTGCT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATGCTGTGAGTGGACATaGCGTTTTCATCCACAGACA +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQACCEWT*RFHPQT
Trigger: TGTCTGTGGATGAAAACGTCATGTCCACTCACAGCA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGCCACTGCCCGTCGTTaGCCTGAATGCTCTGGACGG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRATARR*PECSGR
Trigger: CCGTCCAGAGCATTCAGGTCAACGACGGGCAGTGGC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAAAATTGGGCAGGTACTaGTTCAGGTTGAACCTCTGC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAKLGRY*FRLNLC
Trigger: GCAGAGGTTCAACCTGAATCAGTACCTGCCCAATTT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACTGCAGGAGTTTCTCTaGCAACATTTTGGCAACACC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQALQEFL*QHFGNT
Trigger: GGTGTTGCCAAAATGTTGGCAGAGAAACTCCTGCAG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATCACCACACCGGTCATaGTGTCGATGGAAAACTTCT +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQASPHRS*CRWKTS
Trigger: AGAAGTTTTCCATCGACAGCATGACCGGTGTGGTGA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACTGGACAATTCTAACTaGGCCGCTGAGTTTATCCAC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQALDNSN*AAEFIH
Trigger: GTGGATAAACTCAGCGGCGCAGTTAGAATTGTCCAG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAGCGCCCGTTGTCAACTaGCTTAATGGAAAGAATGTC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAAPVVN*LNGKNV
Trigger: GACATTCTTTCCATTAAGGCAGTTGACAACGGGCGC...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACACTGGTGAACCACGGTaGGTGGTCATTCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHTGEPR*VVILVT
Trigger: AGTGACAAGAATGACCACGCACCGTGGTTCACCAGT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATCTGTATTGCGATGGTaGCAGTCTTGTGGTCCATTG +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQASVLRW*QSCGPL
Trigger: CAATGGACCACAAGACTGGCACCATCGCAATACAGA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGAAGGTCCCGTCTGTTaGTGTGACAGTCAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHEGPVC*CDSQKV
Trigger: TACCTTCTGACTGTCACAGCAACAGACGGGACCTTC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGGACGCCCAGGATGTTaGGTAGGGCTCGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEGRPGC*VGLAGS
Trigger: ACTTCCAGCGAGCCCTACGCAACATCCTGGGCGTCC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTCGAGTCGCTTGGAATaGTGGGAGTGTAGGAAATGG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHSSRLE*WECRKW
Trigger: CCATTTCCTACACTCCCAGCATTCCAAGCGACTCGA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCGATGCTGGTCCTTATaGCTGTGTTTTCCGGCAAAG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHRCWSL*LCFPAK
Trigger: CTTTGCCGGAAAACACAGCCATAAGGACCAGCATCG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGACTTCCCGGCGGTATaGCAAGCCCCAGTCAGACGC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKDFPAV*QAPVRR
Trigger: GCGTCTGACTGGGGCTTGCCATACCGCCGGGAAGTC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGACCGGGGTTCCTCTGTaGCTTGGTCCCTGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRTGVPL*LGPWPR
Trigger: TCGAGGCCAGGGACCAAGCCACAGAGGAACCCCGGT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATTCGATGTAGAAAACTaGGGGCGGTGGTCATTGGTA +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAFDVEN*GRWSLV
Trigger: TACCAATGACCACCGCCCCCAGTTTTCTACATCGAA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACACAAACCGGCCATGTTaGTCCCTTGCACTGTCAATG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHTNRPC*SLALSM
Trigger: CATTGACAGTGCAAGGGACCAACATGGCCGGTTTGT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATGTTCTGTATTGCGATaGTGCCAGTCTTGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQACSVLR*CQSCGP
Trigger: TGGACCACAAGACTGGCACCATCGCAATACAGAACA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCACTTTCAGCCCTTCTaGGCTGTTGGCTTGGATATG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHHFQPF*AVGLDM
Trigger: CATATCCAAGCCAACAGCCCAGAAGGGCTGAAAGTG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACGACCGACGTCCCTTTaGCAGCGCTGGACCCGATGT +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKRPTSL*QRWTRC
Trigger: ACATCGGGTCCAGCGCTGCCAAAGGGACGTCGGTCG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACAGTGGCCTGCACTCTaGTCAGCGGTGTCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKQWPAL*SAVSQA
Trigger: AGCCTGGGACACCGCTGACCAGAGTGCAGGCCACTG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACAGCTGTCAATCTCCTTaGCAATCCTTGGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHSCQSP*QSLVHC
Trigger: GCAGTGGACCAAGGATTGCCAAGGAGATTGACAGCT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTGTCCTCAGACACACTaGCGCCATATTCACGGTACT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHCPQTH*RHIHGT
Trigger: AGTACCGTGAATATGGCGCCAGTGTGTCTGAGGACA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCACTGTAGTTGTCTCTaGAGAAGAGGGGAGCGTTGT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHHCSCL*RRGERC
Trigger: ACAACGCTCCCCTCTTCTCCAGAGACAACTACAGTG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATGGAGCAGTCTTCTGTaGCGGTCAATAAGCATCCAT +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAWSSLL*RSISIH
Trigger: ATGGATGCTTATTGACCGCCACAGAAGACTGCTCCA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATCTGACAGGGGCTGCTaGAGCAGTCTTCTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSESDRGC*SSLLWR
Trigger: CCGCCACAGAAGACTGCTCCAGCAGCCCCTGTCAGA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATACAGCCCCCTGCACTaGCACACAAAGCCGCCGTTG +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEYSPLH*HTKPPL
Trigger: CAACGGCGGCTTTGTGTGCCAGTGCAGGGGGCTGTA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACGGGCACTGTATGGCTaGGAGGGCTTTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSERALYG*EGFSSR
Trigger: CCTGGAGGAAAAGCCCTCCCAGCCATACAGTGCCCG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATGGGCATGTTTTCTATaGTGGGCGCTTCGAAGTTTC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAWACFL*WALRSF
Trigger: GAAACTTCGAAGCGCCCACCATAGAAAACATGCCCA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGTCACCTCTTCGAAGTaGCCGTCGTCCCCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRVTSSK*PSSPLS
Trigger: CGAGAGCGGGGACGACGGCCACTTCGAAGAGGTGAC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATGTGGAGAAATGATGTaGACAACTTTCACGGGGGAA +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQACGEMM*TTFTGE
Trigger: TTCCCCCGTGAAAGTTGTTCACATCATTTCTCCACA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCCCTATCTACTGCACTaGTCTGCAGAATCTCCACTT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHPYLLH*SAESPL
Trigger: AAGTGGAGATTCTGCAGATCAGTGCAGTAGATAGGG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAAGTACTCTTTGGATGTaGACTTGGGAGAGGCATTGT +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQASTLWM*TWERHC
Trigger: ACAATGCCTCTCCCAAGTTCACATCCAAAGAGTACT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCCCTTGCACTGTCAATaGATACATGGGCAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHPLHCQ*IHGQCF
Trigger: GAAACACTGCCCATGTATTCATTGACAGTGCAAGGG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCTCGCTGATGAATCCTaGATATTCTGCCTGCGTGAA +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHLADES*IFCLRE
Trigger: TTCACGCAGGCAGAATATTCAGGATTCATCAGCGAG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCGTGCACTTGGACGGTaGAGTGAAAAGCATGTGTTT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHRALGR*SEKHVF
Trigger: AAACACATGCTTTTCACTTCACCGTCCAAGTGCACG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAAGTCTTGTGGTCCATTaGGAACTTCTCCCCAATGTT +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQASLVVH*ELLPNV
Trigger: AACATTGGGGAGAAGTTCTCAATGGACCACAAGACT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGCCAGGATGGAAAACTaGTACCACTTAGTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHARMEN*YHLVVS
Trigger: TGAGACCACTAAGTGGTATCAGTTTTCCATCCTGGC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGGTCTAGGCTGTACATaGCTTGGCCGTTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEGLGCT*LGRWLL
Trigger: CAGGAGCCAACGGCCAAGTCATGTACAGCCTAGACC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATCCTGTGATGAAGTATaGCACCTGTCTGTTGATCTC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQASCDEV*HLSVDL
Trigger: GAGATCAACAGACAGGTGTCATACTTCATCACAGGA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCTCCGTCCGTGGCCTTaGCTAGAAGATTATAAACTG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHLRPWP*LEDYKL
Trigger: CAGTTTATAATCTTCTAGTCAAGGCCACGGACGGAG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGAGCCGCATCCTCACTaGCCACGGTGGTGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKEPHPH*PRWCRC
Trigger: ACACCTACACCACCGTGGTCAGTGAGGATGCGGCTC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACAAATTGGGCAGGTACTaGTTCAGGTTGAACCTCTGC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHKLGRY*FRLNLC
Trigger: GCAGAGGTTCAACCTGAATCAGTACCTGCCCAATTT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATGTAACTTATTCGCCTaGAGGAGTTTCTCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQACNLFA*RSFSAN
Trigger: GTTGGCAGAGAAACTCCTGCAGGCGAATAAGTTACA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGCGCCCGTTGTCAACTaGCTTAATGGAAAGAATGTC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHAPVVN*LNGKNV
Trigger: GACATTCTTTCCATTAAGGCAGTTGACAACGGGCGC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGCTGGATTTCTGTTCTaGATCAAGGGGCTTAGCAAC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHAGFLF*IKGLSN
Trigger: GTTGCTAAGCCCCTTGATGCAGAACAGAAATCCAGC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAGTATGTCACCATTTCTaGCACTGTCTCTGTCAATGG +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAVCHHF*HCLCQW
Trigger: CCATTGACAGAGACAGTGGCAGAAATGGTGACATAC...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATGCCCGTGTGCGGCGTaGTCGCTGATTCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKCPCAA*SLILAS
Trigger: TGAAGCCAGAATCAGCGAGCACGCCGCACACGGGCA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACACGAAATGCCCGTGTaGGGCGTGCTCGCTGATTCT +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEHEMPV*GVLADS
Trigger: AGAATCAGCGAGCACGCCGCACACGGGCATTTCGTG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACAGAATCTCTGTCAGATaGCTTCACTTGGACCACCAG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHRISVR*LHLDHQ
Trigger: CTGGTGGTCCAAGTGAAGGCATCTGACAGAGATTCT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATTCAGTCTCCCATTCTaGCTGTCGATCACAAAGAAC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAFSLPF*LSITKN
Trigger: GTTCTTTGTGATCGACAGGCAGAATGGGAGACTGAA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACACCCTCCAGTCACTCTaGACATTTTCCACAGCAAAC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHTLQSL*TFSTAN
Trigger: GTTTGCTGTGGAAAATGTGCAGAGTGACTGGAGGGT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACAGTGTAAGTAATCTCTaGGTTGGACCGGATATCCGC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHSVSNL*VGPDIR
Trigger: GCGGATATCCGGTCCAACGCAGAGATTACTTACACT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATGTGTGCAATCAGCTTaGCCCCCGTGCTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSECVQSA*PPCWRQ
Trigger: CTGTCTCCAGCACGGGGGGCAAGCTGATTGCACACA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGGACGCCCAGGATGTTaGGTAGGGCTCGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKGRPGC*VGLAGS
Trigger: ACTTCCAGCGAGCCCTACGCAACATCCTGGGCGTCC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATGGGGTTCGGAGGGCTaGAGGCTGACGATCTGTATG +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEWGSEG*RLTICM
Trigger: CATACAGATCGTCAGCCTGCAGCCCTCCGAACCCCA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCTACGTACAACGCGCTaGACTTGCAGTAATAACCTC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHLRTTR*TCSNNL
Trigger: GAGGTTATTACTGCAAGTGCAGCGCGTTGTACGTAG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTGGAAGTGTGTAAACTaGATAGGAGGGGTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHWKCVN*IGGVGS
Trigger: TGAACCCACCCCTCCTATCCAGTTTACACACTTCCA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTCAGTGGCTTCGACCTaGATGATTTCACTGTTCACC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHSVAST*MISLFT
Trigger: GGTGAACAGTGAAATCATCCAGGTCGAAGCCACTGA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATCACGATCCAAAGGCTaGATAATTTTCACCACACCG +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQASRSKG*IIFTTP
Trigger: CGGTGTGGTGAAAATTATCCAGCCTTTGGATCGTGA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACCTTCAGGAGCACGGTaGAGAACAACCGGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEPSGAR*RTTGVP
Trigger: AGGAACCCCGGTTGTTCTCCACCGTGCTCCTGAAGG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGCTCCGAGGACGGCTTaGGTTTGGAGATCCACTCGA +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEAPRTA*VWRSTR
Trigger: TCGAGTGGATCTCCAAACCCAAGCCGTCCTCGGAGC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTTCGATGTAGAAAACTaGGGGCGGTGGTCATTGGTA +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHFDVEN*GRWSLV
Trigger: TACCAATGACCACCGCCCCCAGTTTTCTACATCGAA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACAATTTCTGTTCCAATaGGCGTGTCTTCTGAGATGG +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAQFLFQ*ACLLRW
Trigger: CCATCTCAGAAGACACGCCCATTGGAACAGAAATTG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGACCCTGCTTCCCCCTaGCAGGTTTTCAACAATAAA +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHDPASP*QVFNNK
Trigger: TTTATTGTTGAAAACCTGCCAGGGGGAAGCAGGGTC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAACGGTACTCAAACACTaGCGGGTTGTCGTTTATATC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQATVLKH*RVVVYI
Trigger: GATATAAACGACAACCCGCCAGTGTTTGAGTACCGT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAACATTGAGAAGGTACTaGCCTATGTCCAGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQATLRRY*PMSSFL
Trigger: CAGAAAGCTGGACATAGGCCAGTACCTTCTCAATGT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTGGAGCAGTCTTCTGTaGCGGTCAATAAGCATCCAT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHWSSLL*RSISIH
Trigger: ATGGATGCTTATTGACCGCCACAGAAGACTGCTCCA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTCTGACAGGGGCTGCTaGAGCAGTCTTCTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRSDRGC*SSLLWR
Trigger: CCGCCACAGAAGACTGCTCCAGCAGCCCCTGTCAGA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATACAGCCCCCTGCACTaGCACACAAAGCCGCCGTTG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKYSPLH*HTKPPL
Trigger: CAACGGCGGCTTTGTGTGCCAGTGCAGGGGGCTGTA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACGATGTTCCACGGGGTaGACACGTAGTGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSERCSTG*TRSGWE
Trigger: CTCCCAACCACTACGTGTCCACCCCGTGGAACATCG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AGGAGCAGCCAAAGATTCTTCTTTATTCACCGTGTCAACGACAGCGTTGACAAGAGTCGCTTGGAATGCTaGGAGTGTAGGAAATGGGAC +
Preference number: 4 (lower is better)
Translates to: RSSQRFFFIHRVNDSVDKSRLEC*ECRKWD
Trigger: GTCCCATTTCCTACACTCCCAGCATTCCAAGCGACT...CTTGTCAACGCTGTCGTTGACACGGTGAATAAAGAAGAATCTTTGGCTGCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186342.3
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGCGGGCACTGTATGGCTaGGAGGGCTTTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRRALYG*EGFSSR
Trigger: CCTGGAGGAAAAGCCCTCCCAGCCATACAGTGCCCG...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGCTCCCGGGCACTGTATaGCTGGGAGGGCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRLPGTV*LGGLFL
Trigger: GAGGAAAAGCCCTCCCAGCCATACAGTGCCCGGGAG...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATCTGATGTATCCCAGTaGTACCCATTGTCATCACAG +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQASDVSQ*YPLSSQ
Trigger: CTGTGATGACAATGGGTACCACTGGGATACATCAGA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098796.10
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGAACTCTTGTATGTCTaGCAGAGGGACACTTGGCAT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHELLYV*QRDTWH
Trigger: ATGCCAAGTGTCCCTCTGCCAGACATACAAGAGTTC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACTCTGGAGGCAATGGTaGCAGTTCATCGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSELWRQW*QFIGCR
Trigger: CCTGCACCCGATGAACTGCCACCATTGCCTCCAGAG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATTTCTTCATCTATCCTaGAGACACCAATTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAFLHLS*RHQFQS
Trigger: GCTCTGGAATTGGTGTCTTCAGGATAGATGAAGAAA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTGGGTGAGTTTTCCATaGTTTCTGGATAGTACACGG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHWVSFP*FLDSTR
Trigger: CCGTGTACTATCCAGAAATCATGGAAAACTCACCCA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACAGTACTCTTTGGATGTaGACTTGGGAGAGGCATTGT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHSTLWM*TWERHC
Trigger: ACAATGCCTCTCCCAAGTTCACATCCAAAGAGTACT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAACTTGGACGGTGAAGTaGAAAGCATGTGTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQATWTVK*KACVSS
Trigger: TGAAGAAACACATGCTTTTCACTTCACCGTCCAAGT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACAGTCTTGTGGTCCATTaGGAACTTCTCCCCAATGTT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHSLVVH*ELLPNV
Trigger: AACATTGGGGAGAAGTTCTCAATGGACCACAAGACT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACCTTGGCGACCACTGTaGCAAGGTATTCTTTATTTA +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAPWRPL*QGILYL
Trigger: TAAATAAAGAATACCTTGTCACAGTGGTCGCCAAGG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTTTCCAAGTTCTCCTTaGCACTTTCAGAATCCGCCT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHFPSSP*HFQNPP
Trigger: AGGCGGATTCTGAAAGTGTCAAGGAGAACTTGGAAA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACAGGAGTATTGCCTTTaGCAAGGATGTAAAGAACAG +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAQEYCL*QGCKEQ
Trigger: CTGTTCTTTACATCCTTGTCAAAGGCAATACTCCTG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGGTCTAGGCTGTACATaGCTTGGCCGTTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKGLGCT*LGRWLL
Trigger: CAGGAGCCAACGGCCAAGTCATGTACAGCCTAGACC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGGTCTAGGCTGTACATaGCTTGGCCGTTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRGLGCT*LGRWLL
Trigger: CAGGAGCCAACGGCCAAGTCATGTACAGCCTAGACC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATCACCGTGGTTGTGTTaGCTCTGGGTGGATTGCCGT +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSESPWLC*LWVDCR
Trigger: ACGGCAATCCACCCAGAGTCAACACAACCACGGTGA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATGTCGGCCACCGTGGTaGATTTCCCATCTGTCACGC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKCRPPW*ISHLSR
Trigger: GCGTGACAGATGGGAAATTCACCACGGTGGCCGACA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTGTCGGCCACCGTGGTaGATTTCCCATCTGTCACGC +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRCRPPW*ISHLSR
Trigger: GCGTGACAGATGGGAAATTCACCACGGTGGCCGACA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAGGCTTTCACTTTGAATaGTTTACTCCCTGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAGFHFE*FTPWER
Trigger: TCTTTCCCAGGGAGTAAAGCATTCAAAGTGAAAGCC...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTTCTCAAAGTCCAGCTaGTGGACAATTCTAACTGCG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHFSKSS*WTILTA
Trigger: CGCAGTTAGAATTGTCCAGCAGCTGGACTTTGAGAA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCTCATCCCTATCTACTaGACTGATCTGCAGAATCTC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHLIPIY*TDLQNL
Trigger: GAGATTCTGCAGATCAGTGCAGTAGATAGGGATGAG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGGCTGGCTGGATCGATaGTGCTCTGCAGAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEGWLDR*CSAECR
Trigger: TCTACACTCTGCAGAGCAGCATCGATCCAGCCAGCC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATCCAGAGCTGTCACTTaGAGCACAACTGAGCCCACG +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSESRAVT*STTEPT
Trigger: CGTGGGCTCAGTTGTGCTGCAAGTGACAGCTCTGGA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGTATGTCACCATTTCTaGCACTGTCTCTGTCAATGG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHVCHHF*HCLCQW
Trigger: CCATTGACAGAGACAGTGGCAGAAATGGTGACATAC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAGTGTCATGCTCAAACTaGTTCTTCAGAGAAATGTCG +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAVSCSN*FFREMS
Trigger: CGACATTTCTCTGAAGAAGCAGTTTGAGCATGACAC...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTTCAGTCTCCCATTCTaGCTGTCGATCACAAAGAAC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHFSLPF*LSITKN
Trigger: GTTCTTTGTGATCGACAGGCAGAATGGGAGACTGAA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACACTCAACGAAGGCGTaGCTCCATCAGTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEHSTKA*LHQWLP
Trigger: TGGAAGCCACTGATGGAGGCACGCCTTCGTTGAGTG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATGTGTGCAATCAGCTTaGCCCCCGTGCTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKCVQSA*PPCWRQ
Trigger: CTGTCTCCAGCACGGGGGGCAAGCTGATTGCACACA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGTCACTTGTTGGATGTaGACGGTGATGTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEVTCWM*TVMSAT
Trigger: GGTGGCCGACATCACCGTGCACATCCAACAAGTGAC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AGGAGCAGCCAAAGATTCTTCTTTATTCACCGTGTCAACGACAGCGTTGACAAGAGCCTTCGAAGGAATTaGGGTCAAGGTTGTTTCTCG +
Preference number: 4 (lower is better)
Translates to: RSSQRFFFIHRVNDSVDKSLRRN*GQGCFS
Trigger: CGAGAAACAACCTTGACCGCAATTCCTTCGAAGGCT...CTTGTCAACGCTGTCGTTGACACGGTGAATAAAGAAGAATCTTTGGCTGCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186342.3
CDS-3UTR GCA 90 bp TCTTCTTTATTCACCGTGTCAACGACAGCGTTGACAAGGTGTATTACAGTCACTGCTTTTCGATGCCCGTaGATAGACTCGGGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: SSLFTVSTTALTRCITVTAFRCP*IDSGLK
Trigger: CTTCAACCCCGAGTCTATGCACGGGCATCGAAAAGC...AGTGACTGTAATACACCTTGTCAACGCTGTCGTTGACACGGTGAATAAAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186342.3
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAGAATGCTTTACTCCCTaGGAAAGACCTCACTGTTTT +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAECFTP*ERPHCF
Trigger: AAAACAGTGAGGTCTTTCCCAGGGAGTAAAGCATTC...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGCCAGCTCTGAACTGTaGAGAAATGATGTGAACAAC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHASSEL*RNDVNN
Trigger: GTTGTTCACATCATTTCTCCACAGTTCAGAGCTGGC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGCTCGTCGGCGTCAATaGCAGACACGGTGGTTATCT +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEARRRQ*QTRWLS
Trigger: AGATAACCACCGTGTCTGCCATTGACGCCGACGAGC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGGTTCCTCTGTGGCTTaGTCCCTGGCCTCGATCTTT +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEGSSVA*SLASIF
Trigger: AAAGATCGAGGCCAGGGACCAAGCCACAGAGGAACC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGCCTTCAGGAGCACGGTaGAGAACAACCGGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRPSGAR*RTTGVP
Trigger: AGGAACCCCGGTTGTTCTCCACCGTGCTCCTGAAGG...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGCTCCGAGGACGGCTTaGGTTTGGAGATCCACTCGA +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRAPRTA*VWRSTR
Trigger: TCGAGTGGATCTCCAAACCCAAGCCGTCCTCGGAGC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACCACCACCGTTGTGTTaGTGGACAAACCGGCCATGT +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEPPPLC*WTNRPC
Trigger: ACATGGCCGGTTTGTCCACCAACACAACGGTGGTGG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATTTAAATCTGCGGTCTaGGTTGAGGATGCGGTAAAA +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAFKSAV*VEDAVK
Trigger: TTTTACCGCATCCTCAACCCAGACCGCAGATTTAAA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAGCGTGTCTTCTGAGATaGTATAGGTATAAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAACLLR*YRYKRA
Trigger: AGCCCTTTTATACCTATACCATCTCAGAAGACACGC...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCATCAAGAGTGCATCTaGCCAGGATGGAAAACTGAT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHHQECI*PGWKTD
Trigger: ATCAGTTTTCCATCCTGGCCAGATGCACTCTTGATG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACTGTGTCTGCATCAGTaGCCTGCACTCTGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKLCLHQ*PALWSA
Trigger: CGCTGACCAGAGTGCAGGCCACTGATGCAGACACAG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACACGGTACTCAAACACTaGCGGGTTGTCGTTTATATC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHTVLKH*RVVVYI
Trigger: GATATAAACGACAACCCGCCAGTGTTTGAGTACCGT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGCGTGCCTCCATCAGTaGCTTCCACGGTCAGGTAAT +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEACLHQ*LPRSGN
Trigger: ATTACCTGACCGTGGAAGCCACTGATGGAGGCACGC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATCTCCAGCGGCAAGATaGCAGGAGGGTGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSESPAAR*QEGGCF
Trigger: AAAGCATCCACCCTCCTGCCATCTTGCCGCTGGAGA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACGAATGGCGACGGTGTaGTTCAGCATCTCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKRMATV*FSISWV
Trigger: GACCCAGGAGATGCTGAACCACACCGTCGCCATTCG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGCGAATGGCGACGGTGTaGTTCAGCATCTCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRRMATV*FSISWV
Trigger: GACCCAGGAGATGCTGAACCACACCGTCGCCATTCG...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACCCGCACAGAGCTTCTaGAACACTTCCAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEPAQSF*NTSRIL
Trigger: GAGGATCCTGGAAGTGTTCCAGAAGCTCTGTGCGGG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACCCATGGTGGACAGGTaGGCATGTCCCGTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKPMVDR*ACPVFA
Trigger: TGCAAAGACGGGACATGCCCACCTGTCCACCATGGG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACGATGTTCCACGGGGTaGACACGTAGTGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKRCSTG*TRSGWE
Trigger: CTCCCAACCACTACGTGTCCACCCCGTGGAACATCG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGCGATGTTCCACGGGGTaGACACGTAGTGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRRCSTG*TRSGWE
Trigger: CTCCCAACCACTACGTGTCCACCCCGTGGAACATCG...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TCTTCTTTATTCACCGTGTCAACGACAGCGTTGACAAGGTGTATTACAGTCACTGAAGGTGCTGAATTCTaGATGCTCTGGGATCGCGGA +
Preference number: 4 (lower is better)
Translates to: SSLFTVSTTALTRCITVTEGAEF*MLWDRG
Trigger: TCCGCGATCCCAGAGCATCCAGAATTCAGCACCTTC...AGTGACTGTAATACACCTTGTCAACGCTGTCGTTGACACGGTGAATAAAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186342.3
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTCTGATGTATCCCAGTaGTACCCATTGTCATCACAG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHSDVSQ*YPLSSQ
Trigger: CTGTGATGACAATGGGTACCACTGGGATACATCAGA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098796.10
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATGCAGGGAAGTCCTCTaGTGGGGGTGGAAAGTCACT +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSECREVL*WGWKVT
Trigger: AGTGACTTTCCACCCCCACCAGAGGACTTCCCTGCA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACTCTGGAGGCAATGGTaGCAGTTCATCGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKLWRQW*QFIGCR
Trigger: CCTGCACCCGATGAACTGCCACCATTGCCTCCAGAG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGTAGGGTTCTCTACATaGACTGTTCTCGCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEVGFST*TVLASA
Trigger: GGCGCTGGCGAGAACAGTCCATGTAGAGAACCCTAC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGTTTCTTTGATACCCTaGGGGGTAGGGGGTGTAGGG +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEVSLIP*GVGGVG
Trigger: CCCTACACCCCCTACCCCCCAGGGTATCAAAGAAAC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGTTTTCGCTGTCTCCTaGGACGATTTTGTACCTTAT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHVFAVS*DDFVPY
Trigger: ATAAGGTACAAAATCGTCTCAGGAGACAGCGAAAAC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTTCTCGAACTTTCACTaGGTAATTGGGTGGGATGAA +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHFSNFH*VIGWDE
Trigger: TTCATCCCACCCAATTACTCAGTGAAAGTTCGAGAA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAAAGTGGCCTTCTCCGTaGTCCAGGAGGCTGTATCTC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKKWPSP*SRRLYL
Trigger: GAGATACAGCCTCCTGGATCACGGAGAAGGCCACTT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACATTGTCAGCAACAGTaGCAGCGATACGCACGGAGG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKHCQQQ*QRYARR
Trigger: CCTCCGTGCGTATCGCTGTCACTGTTGCTGACAATG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGCATTGTCAGCAACAGTaGCAGCGATACGCACGGAGG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRHCQQQ*QRYARR
Trigger: CCTCCGTGCGTATCGCTGTCACTGTTGCTGACAATG...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCCTTGGCGACCACTGTaGCAAGGTATTCTTTATTTA +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHPWRPL*QGILYL
Trigger: TAAATAAAGAATACCTTGTCACAGTGGTCGCCAAGG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGTGCGGCGTGCTCGCTaGTTCTGGCTTCATAAACCT +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRVRRAR*FWLHKP
Trigger: AGGTTTATGAAGCCAGAATCAGCGAGCACGCCGCAC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCAAGTTTCTCCAAAGTaGAAATCTGCCCTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHQVSPK*KSALCH
Trigger: ATGACAGAGGGCAGATTTTCACTTTGGAGAAACTTG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCAGGAGTATTGCCTTTaGCAAGGATGTAAAGAACAG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHQEYCL*QGCKEQ
Trigger: CTGTTCTTTACATCCTTGTCAAAGGCAATACTCCTG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACGTAGTCGCTCATCATaGCCTCAGACTCCACTTCAC +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSERSRSS*PQTPLH
Trigger: GTGAAGTGGAGTCTGAGGTCATGATGAGCGACTACG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACGTGGCACTGACTCTTaGGATGCTGGTCCTTATGGC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKRGTDS*DAGPYG
Trigger: GCCATAAGGACCAGCATCGCAAGAGTCAGTGCCACG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAAAATGGGATGTGTGCTaGCTTCTAATGGGTTCTAAA +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAKWDVC*LLMGSK
Trigger: TTTAGAACCCATTAGAAGGCAGCACACATCCCATTT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGGCTGGCTGGATCGATaGTGCTCTGCAGAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRGWLDR*CSAECR
Trigger: TCTACACTCTGCAGAGCAGCATCGATCCAGCCAGCC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGTGTCATGCTCAAACTaGTTCTTCAGAGAAATGTCG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHVSCSN*FFREMS
Trigger: CGACATTTCTCTGAAGAAGCAGTTTGAGCATGACAC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTGGACCACTGGGCTGTaGATCTGGATGTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRWTTGL*IWMFSG
Trigger: CCCAGAGAACATCCAGATGCACAGCCCAGTGGTCCA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTTACGTGGCTGTAAATaGCAGAATCTCTGTCAGATG +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHLRGCK*QNLCQM
Trigger: CATCTGACAGAGATTCTGGCATTTACAGCCACGTAA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACAATCCTTGGTCCACTaGTTTCAAAGTGAGAGTATA +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAQSLVH*FQSESI
Trigger: TATACTCTCACTTTGAAAGCAGTGGACCAAGGATTG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGTCACTTGTTGGATGTaGACGGTGATGTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRVTCWM*TVMSAT
Trigger: GGTGGCCGACATCACCGTGCACATCCAACAAGTGAC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGGGCTCGCTGGAAGTTaGGCCAGTAGTCACCAACAA +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRGLAGS*ASSHQQ
Trigger: TTGTTGGTGACTACTGGCGCAACTTCCAGCGAGCCC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAAGTAAGACGTCCAGATaGGAATGGGGTTCGGAGGGC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKSKTSR*EWGSEG
Trigger: GCCCTCCGAACCCCATTCGCATCTGGACGTCTTACT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGAGTAAGACGTCCAGATaGGAATGGGGTTCGGAGGGC +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRSKTSR*EWGSEG
Trigger: GCCCTCCGAACCCCATTCGCATCTGGACGTCTTACT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGAGGCATCCTCACAGTaGTTCCCTCTGTACTCCTGG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNREASSQ*FPLYSW
Trigger: CCAGGAGTACAGAGGGAAGCACTGTGAGGATGCCTC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGAAGGAGCTAAGCGACTaGACCTCAGACAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRKELSD*TSDRLS
Trigger: GGAGAGCCTGTCTGAGGTGCAGTCGCTTAGCTCCTT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCGGTATTCCCTCCTTTaGTTCTTATCCTTAGAAAGC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHRYSLL*FLSLES
Trigger: GCTTTCTAAGGATAAGAACCAAAGGAGGGAATACCG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAAGACGCTGTAGGAGGTaGGGGAGAATAAGGGCCTTA +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSERRCRR*GRIRAL
Trigger: TAAGGCCCTTATTCTCCCCCACCTCCTACAGCGTCT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGATGATGGCGTAGGTTaGGTCCTTGTCCAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEDDGVG*VLVQLR
Trigger: TCTGAGCTGGACAAGGACCCAACCTACGCCATCATC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGAATGCTTTACTCCCTaGGAAAGACCTCACTGTTTT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHECFTP*ERPHCF
Trigger: AAAACAGTGAGGTCTTTCCCAGGGAGTAAAGCATTC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGCTCGTCGGCGTCAATaGCAGACACGGTGGTTATCT +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRARRRQ*QTRWLS
Trigger: AGATAACCACCGTGTCTGCCATTGACGCCGACGAGC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGCTCGTCGGCGTCAATaGCAGACACGGTGGTTATCT +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKARRRQ*QTRWLS
Trigger: AGATAACCACCGTGTCTGCCATTGACGCCGACGAGC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATCTCTGCCAACATTTTaGCAACACCGGTCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSESLPTF*QHRSPR
Trigger: GCGAGGAGACCGGTGTTGCCAAAATGTTGGCAGAGA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAACTTTGATGAGGACCTaGGTGAGGATCGTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSETLMRT*VRIVVV
Trigger: GACCACCACGATCCTCACCCAGGTCCTCATCAAAGT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATTCTGCAGAGAAAGCTaGACTCCCTCCGTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKFCRES*TPSVLG
Trigger: GCCAAGGACGGAGGGAGTCCAGCTTTCTCTGCAGAA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACTGTTGGCTTGGATATaGACCACTGGGCTGTGCATC +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSELLAWI*TTGLCI
Trigger: GATGCACAGCCCAGTGGTCCATATCCAAGCCAACAG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATCTGGGCTGTTGGCTTaGATATGGACCACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKSGLLA*IWTTGL
Trigger: CAGCCCAGTGGTCCATATCCAAGCCAACAGCCCAGA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGCGTGTCTTCTGAGATaGTATAGGTATAAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHACLLR*YRYKRA
Trigger: AGCCCTTTTATACCTATACCATCTCAGAAGACACGC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGCGTGCCTCCATCAGTaGCTTCCACGGTCAGGTAAT +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRACLHQ*LPRSGN
Trigger: ATTACCTGACCGTGGAAGCCACTGATGGAGGCACGC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATGTGTTGACTCTGGGTaGATTGCCGTTGTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKCVDSG*IAVVGS
Trigger: GCTGCCGACAACGGCAATCCACCCAGAGTCAACACA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTGTGTTGACTCTGGGTaGATTGCCGTTGTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRCVDSG*IAVVGS
Trigger: GCTGCCGACAACGGCAATCCACCCAGAGTCAACACA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAAAGATGGCAGGAGGGTaGATGCTTTCCTCGATCACC +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEKMAGG*MLSSIT
Trigger: GGTGATCGAGGAAAGCATCCACCCTCCTGCCATCTT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATCTCCAGCGGCAAGATaGCAGGAGGGTGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKSPAAR*QEGGCF
Trigger: AAAGCATCCACCCTCCTGCCATCTTGCCGCTGGAGA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATCCTGGGTCACTTGTTaGATGTGCACGGTGATGTCG +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSESWVTC*MCTVMS
Trigger: CGACATCACCGTGCACATCCAACAAGTGACCCAGGA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGATTCGCGAAGCGAATaGCGACGGTGTGGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKDSRSE*RRCGSA
Trigger: TGCTGAACCACACCGTCGCCATTCGCTTCGCGAATC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACCCGCACAGAGCTTCTaGAACACTTCCAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKPAQSF*NTSRIL
Trigger: GAGGATCCTGGAAGTGTTCCAGAAGCTCTGTGCGGG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACACACTGCTGTTCTGTaGTGTCGGGGAGTCACGAAA +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEHTAVL*CRGVTK
Trigger: TTTCGTGACTCCCCGACACCACAGAACAGCAGTGTG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTGCTTTGTCCCTTGCTaGCGGAGGTGGCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRCFVPC*RRWPPK
Trigger: TTTTGGTGGCCACCTCCGCCAGCAAGGGACAAAGCA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATCTTCAGGTTCAGCCTaGCGCTTCTTCTTCCGACTG +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSESSGSA*RFFFRL
Trigger: CAGTCGGAAGAAGAAGCGCCAGGCTGAACCTGAAGA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGAAGGTGCTGAATTCTaGATGCTCTGGGATCGCGGA +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEEGAEF*MLWDRG
Trigger: TCCGCGATCCCAGAGCATCCAGAATTCAGCACCTTC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAAGTATCGATGGCGTTTaGATCAGCCGAGTAGAGGGG +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSESIDGV*ISRVEG
Trigger: CCCCTCTACTCGGCTGATCCAAACGCCATCGATACT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATGCAGGGAAGTCCTCTaGTGGGGGTGGAAAGTCACT +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKCREVL*WGWKVT
Trigger: AGTGACTTTCCACCCCCACCAGAGGACTTCCCTGCA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTGCAGGGAAGTCCTCTaGTGGGGGTGGAAAGTCACT +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRCREVL*WGWKVT
Trigger: AGTGACTTTCCACCCCCACCAGAGGACTTCCCTGCA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGAACTCTGGAGGCAATaGTGGCAGTTCATCGGGTGC +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRELWRQ*WQFIGC
Trigger: GCACCCGATGAACTGCCACCATTGCCTCCAGAGTTC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACTGGTCGCTGAACTCTaGAGGCAATGGTGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKLVAEL*RQWWQF
Trigger: GAACTGCCACCATTGCCTCCAGAGTTCAGCGACCAG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGTAGGGTTCTCTACATaGACTGTTCTCGCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRVGFST*TVLASA
Trigger: GGCGCTGGCGAGAACAGTCCATGTAGAGAACCCTAC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACTATGTAGACCTCTATaGAGGACGACAGAGGCACCA +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSELCRPL*RTTEAP
Trigger: TGGTGCCTCTGTCGTCCTTCATAGAGGTCTACATAG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACGAGGATTTTCACGATaGCTCTGGCAATGGTGGATC +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSERGFSR*LWQWWI
Trigger: GATCCACCATTGCCAGAGTCATCGTGAAAATCCTCG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATGTAGGTGTCTTGGCTaGACACGGGGCTGTTATCGT +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKCRCLG*TRGCYR
Trigger: ACGATAACAGCCCCGTGTTCAGCCAAGACACCTACA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGGGGAGCGTTGTCATTaGCATCGGAGACATCGATAT +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEGERCH*HRRHRY
Trigger: ATATCGATGTCTCCGATGTCAATGACAACGCTCCCC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACGTGGATCTTTCCTATaGCCCCACCTGAGTATTCCT +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSERGSFL*PHLSIP
Trigger: AGGAATACTCAGGTGGGGTCATAGGAAAGATCCACG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAAAGCCTGAGTCACACTaGCAGACAGCACCATCCAAA +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEKPESH*QTAPSK
Trigger: TTTGGATGGTGCTGTCTGTCAGTGTGACTCAGGCTT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTTCTCCCCTAAAGCCTaGGTCACACTGACAGACAGC +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRFSPKA*VTLTDS
Trigger: GCTGTCTGTCAGTGTGACTCAGGCTTTAGGGGAGAA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGCTTCTTCTTCCGACTaGTCATCTTCCGGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKASSSD*SSSGRG
Trigger: TCCTCTGCCGGAAGATGATCAGTCGGAAGAAGAAGC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGTCATCACAGGACTCTaGCTGGAAGGAGCTAAGCGA +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRVITGL*LEGAKR
Trigger: TCGCTTAGCTCCTTCCAGTCAGAGTCCTGTGATGAC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAACTTGGCATCCAGTCTaGTGTATCCCAGTGGTACCC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKTWHPV*CIPVVP
Trigger: GGGTACCACTGGGATACATCAGACTGGATGCCAAGT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACGTAGTCGCTCATCATaGCCTCAGACTCCACTTCAC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKRSRSS*PQTPLH
Trigger: GTGAAGTGGAGTCTGAGGTCATGATGAGCGACTACG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACAAATGGGATGTGTGCTaGCTTCTAATGGGTTCTAAA +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHKWDVC*LLMGSK
Trigger: TTTAGAACCCATTAGAAGGCAGCACACATCCCATTT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGTGAGATTATACAGTTaGTTCTTCTCAAAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHVRLYS*FFSKSS
Trigger: GCTGGACTTTGAGAAGAAGCAACTGTATAATCTCAC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAAATGATCGTGACTTTTaGTGTGATTTCCAATCAGCT +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQANDRDF*CDFQSA
Trigger: AGCTGATTGGAAATCACAGCAAAAGTCACGATCATT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAAGTTCCCTGTCCAAATaGTTTTCCAACTGGATAATT +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQASSLSK*FSNWII
Trigger: AATTATCCAGTTGGAAAAGCATTTGGACAGGGAACT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATTTGCAGAGACACACTaGTGTTCTGTGGTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKFAETH*CSVVSG
Trigger: CCCCGACACCACAGAACAGCAGTGTGTCTCTGCAAA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTTTGCAGAGACACACTaGTGTTCTGTGGTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRFAETH*CSVVSG
Trigger: CCCCGACACCACAGAACAGCAGTGTGTCTCTGCAAA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACTCTGTACTCCTGGCTaGAGTTACAGTGATAGGAGC +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSELCTPG*SYSDRS
Trigger: GCTCCTATCACTGTAACTGCAGCCAGGAGTACAGAG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGCTTTTCGATGCCCGTaGATAGACTCGGGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKAFRCP*IDSGLK
Trigger: CTTCAACCCCGAGTCTATGCACGGGCATCGAAAAGC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGCTTTTCGATGCCCGTaGATAGACTCGGGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRAFRCP*IDSGLK
Trigger: CTTCAACCCCGAGTCTATGCACGGGCATCGAAAAGC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGTGGGTTCAAGTCTTTaGCTGCCATCACTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEVGSSL*LPSLSP
Trigger: TGGAGACAGTGATGGCAGCCAAAGACTTGAACCCAC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAAGATGCCCATCTTTCTaGGGTGGCCAACATAGGTCT +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSERCPSF*GGQHRS
Trigger: AGACCTATGTTGGCCACCCCAGAAAGATGGGCATCT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGAGACGCTGTAGGAGGTaGGGGAGAATAAGGGCCTTA +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRRRCRR*GRIRAL
Trigger: TAAGGCCCTTATTCTCCCCCACCTCCTACAGCGTCT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTCTCTGCCAACATTTTaGCAACACCGGTCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRSLPTF*QHRSPR
Trigger: GCGAGGAGACCGGTGTTGCCAAAATGTTGGCAGAGA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACTGTGGCTTGGTCCCTaGCCTCGATCTTTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSELWLGP*PRSLGN
Trigger: ATTACCTAAAGATCGAGGCCAGGGACCAAGCCACAG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGCTTCCACATAGCAAGTaGAAGACAGGGACACGGGCT +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRLPHSK*KTGTRA
Trigger: AGCCCGTGTCCCTGTCTTCCACTTGCTATGTGGAAG...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGACTTTGATGAGGACCTaGGTGAGGATCGTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRTLMRT*VRIVVV
Trigger: GACCACCACGATCCTCACCCAGGTCCTCATCAAAGT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAACAAACCGGCCATGTTaGTCCCTTGCACTGTCAATG +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSETNRPC*SLALSM
Trigger: CATTGACAGTGCAAGGGACCAACATGGCCGGTTTGT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGAGACGAGCAGAGCATTaGATTCCCTGTCAGCATCCG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRRRAEH*IPCQHP
Trigger: CGGATGCTGACAGGGAATCCAATGCTCTGCTCGTCT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGCTGTTGGCTTGGATATaGACCACTGGGCTGTGCATC +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRLLAWI*TTGLCI
Trigger: GATGCACAGCCCAGTGGTCCATATCCAAGCCAACAG...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACACTTTCAGCCCTTCTaGGCTGTTGGCTTGGATATG +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEHFQPF*AVGLDM
Trigger: CATATCCAAGCCAACAGCCCAGAAGGGCTGAAAGTG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAATGCCTCATAGGGACTaGACTCCAAAACTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEMPHRD*TPKLGC
Trigger: ACAGCCCAGTTTTGGAGTCCAGTCCCTATGAGGCAT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAAGGCTGTACATGACTTaGCCGTTGGCTCCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKRLYMT*PLAPES
Trigger: AGACTCAGGAGCCAACGGCCAAGTCATGTACAGCCT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCAGTTCACCTGTGTCTaGATTCAGTTTAAACTTCTC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHQFTCV*IQFKLL
Trigger: GAGAAGTTTAAACTGAATCCAGACACAGGTGAACTG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGTGTCATACACGTCCTaGTCGGTGGCGTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKVSYTS*SVAWIF
Trigger: AAAGATCCACGCCACCGACCAGGACGTGTATGACAC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTCCTGGGTCACTTGTTaGATGTGCACGGTGATGTCG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRSWVTC*MCTVMS
Trigger: CGACATCACCGTGCACATCCAACAAGTGACCCAGGA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATCACGAAACTCAGTCTaGCCGTGCTGTGAGTGGACA +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKSRNSV*PCCEWT
Trigger: TGTCCACTCACAGCACGGCCAGACTGAGTTTCGTGA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTCTTCAGGTTCAGCCTaGCGCTTCTTCTTCCGACTG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRSSGSA*RFFFRL
Trigger: CAGTCGGAAGAAGAAGCGCCAGGCTGAACCTGAAGA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAAGTCGCTTGGAATGCTaGGAGTGTAGGAAATGGGAC +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSESRLEC*ECRKWD
Trigger: GTCCCATTTCCTACACTCCCAGCATTCCAAGCGACT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGAAGGTGCTGAATTCTaGATGCTCTGGGATCGCGGA +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKEGAEF*MLWDRG
Trigger: TCCGCGATCCCAGAGCATCCAGAATTCAGCACCTTC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAAGTATCGATGGCGTTTaGATCAGCCGAGTAGAGGGG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKSIDGV*ISRVEG
Trigger: CCCCTCTACTCGGCTGATCCAAACGCCATCGATACT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAAGGGAAGTCCTCTGGTaGGGGTGGAAAGTCACTTTC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKREVLW*GWKVTF
Trigger: GAAAGTGACTTTCCACCCCCACCAGAGGACTTCCCT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGCGACGGCTTTCACTTTaGATGCTTTACTCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRRRLSL*MLYSLG
Trigger: TCCCAGGGAGTAAAGCATTCAAAGTGAAAGCCGTCG...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGTGATTCTCAAACTGTaGAAGGAAACCTTTGCGCCC +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEVILKL*KETFAP
Trigger: GGGCGCAAAGGTTTCCTTTCACAGTTTGAGAATCAC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGAGACGAGCTTTCCATTaGAGCCAGAGTCAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRRRAFH*SQSQGQ
Trigger: CTGACCTTGACTCTGGCTTCAATGGAAAGCTCGTCT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAAGACGAGCTTTCCATTaGAGCCAGAGTCAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKRRAFH*SQSQGQ
Trigger: CTGACCTTGACTCTGGCTTCAATGGAAAGCTCGTCT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACTATGTAGACCTCTATaGAGGACGACAGAGGCACCA +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKLCRPL*RTTEAP
Trigger: TGGTGCCTCTGTCGTCCTTCATAGAGGTCTACATAG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACCCGCTCTGGGAGCCTaGTTTTGTAAAACTTCTGAA +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEPALGA*FCKTSE
Trigger: TTCAGAAGTTTTACAAAATCAGGCTCCCAGAGCGGG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACCCTATCTACTGCACTaGTCTGCAGAATCTCCACTT +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEPYLLH*SAESPL
Trigger: AAGTGGAGATTCTGCAGATCAGTGCAGTAGATAGGG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACCCTTGCACTGTCAATaGATACATGGGCAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEPLHCQ*IHGQCF
Trigger: GAAACACTGCCCATGTATTCATTGACAGTGCAAGGG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATTGGTTGAGCGAAACTaGGGTGCGTTGTCATTGTCG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKLVERN*GALSLS
Trigger: CGACAATGACAACGCACCTCAGTTTCGCTCAACCAA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTTGGTTGAGCGAAACTaGGGTGCGTTGTCATTGTCG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRLVERN*GALSLS
Trigger: CGACAATGACAACGCACCTCAGTTTCGCTCAACCAA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGGGGAGCGTTGTCATTaGCATCGGAGACATCGATAT +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRGERCH*HRRHRY
Trigger: ATATCGATGTCTCCGATGTCAATGACAACGCTCCCC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACGTGGATCTTTCCTATaGCCCCACCTGAGTATTCCT +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKRGSFL*PHLSIP
Trigger: AGGAATACTCAGGTGGGGTCATAGGAAAGATCCACG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAAAGCCTGAGTCACACTaGCAGACAGCACCATCCAAA +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKKPESH*QTAPSK
Trigger: TTTGGATGGTGCTGTCTGTCAGTGTGACTCAGGCTT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGGTCTAAGATGTAGATaGCCATCTTTCTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKGLRCR*PSFWGG
Trigger: GCCACCCCAGAAAGATGGGCATCTACATCTTAGACC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACTGCAGGAGTTTCTCTaGCAACATTTTGGCAACACC +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSELQEFL*QHFGNT
Trigger: GGTGTTGCCAAAATGTTGGCAGAGAAACTCCTGCAG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGCGCCCGTTGTCAACTaGCTTAATGGAAAGAATGTC +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEAPVVN*LNGKNV
Trigger: GACATTCTTTCCATTAAGGCAGTTGACAACGGGCGC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGACTGGTGAACCACGGTaGGTGGTCATTCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRTGEPR*VVILVT
Trigger: AGTGACAAGAATGACCACGCACCGTGGTTCACCAGT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATCTGTATTGCGATGGTaGCAGTCTTGTGGTCCATTG +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSESVLRW*QSCGPL
Trigger: CAATGGACCACAAGACTGGCACCATCGCAATACAGA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAAGTCGTGTTCTGTATTaGGATGGTGCCAGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSESRVLY*DGASLV
Trigger: CACAAGACTGGCACCATCGCAATACAGAACACGACT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAAGAATCTCTGTCAGATaGCTTCACTTGGACCACCAG +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSERISVR*LHLDHQ
Trigger: CTGGTGGTCCAAGTGAAGGCATCTGACAGAGATTCT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGAAGGTCCCGTCTGTTaGTGTGACAGTCAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNREGPVC*CDSQKV
Trigger: TACCTTCTGACTGTCACAGCAACAGACGGGACCTTC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAATTCAATCCTGTGTCTaGATCAGTGGCCTGCACTCT +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEIQSCV*ISGLHS
Trigger: AGAGTGCAGGCCACTGATGCAGACACAGGATTGAAT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACAGTTCCCTGTCCAAATaGTTTTCCAACTGGATAATT +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHSSLSK*FSNWII
Trigger: AATTATCCAGTTGGAAAAGCATTTGGACAGGGAACT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACTCTGTACTCCTGGCTaGAGTTACAGTGATAGGAGC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKLCTPG*SYSDRS
Trigger: GCTCCTATCACTGTAACTGCAGCCAGGAGTACAGAG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATCGAGTCGCTTGGAATaGTGGGAGTGTAGGAAATGG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKSSRLE*WECRKW
Trigger: CCATTTCCTACACTCCCAGCATTCCAAGCGACTCGA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGTGGGTTCAAGTCTTTaGCTGCCATCACTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKVGSSL*LPSLSP
Trigger: TGGAGACAGTGATGGCAGCCAAAGACTTGAACCCAC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAAGATGCCCATCTTTCTaGGGTGGCCAACATAGGTCT +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKRCPSF*GGQHRS
Trigger: AGACCTATGTTGGCCACCCCAGAAAGATGGGCATCT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATCAGTGGCTTCGACCTaGATGATTTCACTGTTCACC +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSESVAST*MISLFT
Trigger: GGTGAACAGTGAAATCATCCAGGTCGAAGCCACTGA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGCTGTGGCTTGGTCCCTaGCCTCGATCTTTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRLWLGP*PRSLGN
Trigger: ATTACCTAAAGATCGAGGCCAGGGACCAAGCCACAG...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATTCGATGTAGAAAACTaGGGGCGGTGGTCATTGGTA +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEFDVEN*GRWSLV
Trigger: TACCAATGACCACCGCCCCCAGTTTTCTACATCGAA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGTGAACCACGGTGCGTaGTCATTCTTGTCACTGACA +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKVNHGA*SFLSLT
Trigger: TGTCAGTGACAAGAATGACCACGCACCGTGGTTCAC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGTGAACCACGGTGCGTaGTCATTCTTGTCACTGACA +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRVNHGA*SFLSLT
Trigger: TGTCAGTGACAAGAATGACCACGCACCGTGGTTCAC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGACAAACCGGCCATGTTaGTCCCTTGCACTGTCAATG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRTNRPC*SLALSM
Trigger: CATTGACAGTGCAAGGGACCAACATGGCCGGTTTGT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATGTTCTGTATTGCGATaGTGCCAGTCTTGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSECSVLR*CQSCGP
Trigger: TGGACCACAAGACTGGCACCATCGCAATACAGAACA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACAAAGGCTCATTGAGTaGGTTCCCTATCGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEQRLIE*VPYRSD
Trigger: ATCACTGCGATAGGGAACCCACTCAATGAGCCTTTG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGAACACGCCCGACGTGTaGCTGATTTTAAATCTGCGG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRNTPDV*LILNLR
Trigger: CCGCAGATTTAAAATCAGCCACACGTCGGGCGTGTT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACAAGGTTAACAAACACTaGAGCATTATCATTCTGGTC +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHKVNKH*SIIILV
Trigger: GACCAGAATGATAATGCTCCAGTGTTTGTTAACCTT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGATGCCTCATAGGGACTaGACTCCAAAACTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRMPHRD*TPKLGC
Trigger: ACAGCCCAGTTTTGGAGTCCAGTCCCTATGAGGCAT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAATGCCTCATAGGGACTaGACTCCAAAACTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKMPHRD*TPKLGC
Trigger: ACAGCCCAGTTTTGGAGTCCAGTCCCTATGAGGCAT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGACCCTGCTTCCCCCTaGCAGGTTTTCAACAATAAA +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEDPASP*QVFNNK
Trigger: TTTATTGTTGAAAACCTGCCAGGGGGAAGCAGGGTC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAATGATGTCTGCGTCTTaGGATTGGTCTAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEMMSAS*DWSRLY
Trigger: GTACAGCCTAGACCAATCCCAAGACGCAGACATCAT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAAAATGCTTTTCCAACTaGATAATTCCAGATCTCTCA +
Preference number: 4 (lower is better)
Translates to: NTTADVTDSISRFMKVQAKCFSN*IIPDLS
Trigger: TGAGAGATCTGGAATTATCCAGTTGGAAAAGCATTT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACTCCTTGGCAATCCTTaGTCCACTGCTTTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSELLGNP*STAFKV
Trigger: CACTTTGAAAGCAGTGGACCAAGGATTGCCAAGGAG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGAGCTGTCAATCTCCTTaGCAATCCTTGGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRSCQSP*QSLVHC
Trigger: GCAGTGGACCAAGGATTGCCAAGGAGATTGACAGCT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTGTCCTCAGACACACTaGCGCCATATTCACGGTACT +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRCPQTH*RHIHGT
Trigger: AGTACCGTGAATATGGCGCCAGTGTGTCTGAGGACA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGTGAACGGACTTCCCTaGTTCCCCTCTATAATGGAG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKVNGLP*FPSIME
Trigger: CTCCATTATAGAGGGGAACCAGGGAAGTCCGTTCAC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGTGAACGGACTTCCCTaGTTCCCCTCTATAATGGAG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRVNGLP*FPSIME
Trigger: CTCCATTATAGAGGGGAACCAGGGAAGTCCGTTCAC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACACTGTAGTTGTCTCTaGAGAAGAGGGGAGCGTTGT +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKHCSCL*RRGERC
Trigger: ACAACGCTCCCCTCTTCTCCAGAGACAACTACAGTG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGCACTGTAGTTGTCTCTaGAGAAGAGGGGAGCGTTGT +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRHCSCL*RRGERC
Trigger: ACAACGCTCCCCTCTTCTCCAGAGACAACTACAGTG...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAAGTCGCTTGGAATGCTaGGAGTGTAGGAAATGGGAC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKSRLEC*ECRKWD
Trigger: GTCCCATTTCCTACACTCCCAGCATTCCAAGCGACT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGAACTCTTGTATGTCTaGCAGAGGGACACTTGGCAT +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEELLYV*QRDTWH
Trigger: ATGCCAAGTGTCCCTCTGCCAGACATACAAGAGTTC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGTCCTCTGGTGGGGGTaGAAAGTCACTTTCAATGTC +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRVLWWG*KVTFNV
Trigger: GACATTGAAAGTGACTTTCCACCCCCACCAGAGGAC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGTCCTCTGGTGGGGGTaGAAAGTCACTTTCAATGTC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKVLWWG*KVTFNV
Trigger: GACATTGAAAGTGACTTTCCACCCCCACCAGAGGAC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAAGGCGTACACGGACATaGGCATGTTTTCTATGGTGG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKRRTRT*ACFLWW
Trigger: CCACCATAGAAAACATGCCCATGTCCGTGTACGCCT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATCTGATGTATCCCAGTaGTACCCTCTTGGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSESDVSQ*YPLGLL
Trigger: CAGCAAACCAAGAGGGTACCACTGGGATACATCAGA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189017.8
CDS-3UTR TCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATGTGGAGAAATGATGTaGACAACTTTCACGGGGGAA +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSECGEMM*TTFTGE
Trigger: TTCCCCCGTGAAAGTTGTTCACATCATTTCTCCACA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGTGATTCTCAAACTGTaGAAGGAAACCTTTGCGCCC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKVILKL*KETFAP
Trigger: GGGCGCAAAGGTTTCCTTTCACAGTTTGAGAATCAC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGCTTTGGCCCTCACGGTaGGATTATACAGTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRLWPSR*DYTVAS
Trigger: AGAAGCAACTGTATAATCTCACCGTGAGGGCCAAAG...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACTTTGGCCCTCACGGTaGGATTATACAGTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKLWPSR*DYTVAS
Trigger: AGAAGCAACTGTATAATCTCACCGTGAGGGCCAAAG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACCCGCTCTGGGAGCCTaGTTTTGTAAAACTTCTGAA +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKPALGA*FCKTSE
Trigger: TTCAGAAGTTTTACAAAATCAGGCTCCCAGAGCGGG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGCGTGCACTTGGACGGTaGAGTGAAAAGCATGTGTTT +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRRALGR*SEKHVF
Trigger: AAACACATGCTTTTCACTTCACCGTCCAAGTGCACG...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACGTGCACTTGGACGGTaGAGTGAAAAGCATGTGTTT +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKRALGR*SEKHVF
Trigger: AAACACATGCTTTTCACTTCACCGTCCAAGTGCACG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAAAAACAAAGGCTCATTaGGTGGGTTCCCTATCGCAG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKKTKAH*VGSLSQ
Trigger: CTGCGATAGGGAACCCACTCAATGAGCCTTTGTTTT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGAAAACAAAGGCTCATTaGGTGGGTTCCCTATCGCAG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRKTKAH*VGSLSQ
Trigger: CTGCGATAGGGAACCCACTCAATGAGCCTTTGTTTT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGAAGGGTCTCCGTCCGTaGTACTGTAGAACACTTTCA +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRKGLRP*YCRTLS
Trigger: TGAAAGTGTTCTACAGTATCACGGACGGAGACCCTT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATCTGTGGCTCGAACTTaGAGGACAGGTGTTCCAATT +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKSVART*RTGVPI
Trigger: AATTGGAACACCTGTCCTTCAAGTTCGAGCCACAGA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGCCAGGATGGAAAACTaGTACCACTTAGTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRARMEN*YHLVVS
Trigger: TGAGACCACTAAGTGGTATCAGTTTTCCATCCTGGC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGCTCCGTCCGTGGCCTTaGCTAGAAGATTATAAACTG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRLRPWP*LEDYKL
Trigger: CAGTTTATAATCTTCTAGTCAAGGCCACGGACGGAG...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACTCCGTCCGTGGCCTTaGCTAGAAGATTATAAACTG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKLRPWP*LEDYKL
Trigger: CAGTTTATAATCTTCTAGTCAAGGCCACGGACGGAG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATGCTGTGAGTGGACATaGCGTTTTCATCCACAGACA +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKCCEWT*RFHPQT
Trigger: TGTCTGTGGATGAAAACGTCATGTCCACTCACAGCA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTGCTGTGAGTGGACATaGCGTTTTCATCCACAGACA +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRCCEWT*RFHPQT
Trigger: TGTCTGTGGATGAAAACGTCATGTCCACTCACAGCA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGAAATTGGGCAGGTACTaGTTCAGGTTGAACCTCTGC +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRKLGRY*FRLNLC
Trigger: GCAGAGGTTCAACCTGAATCAGTACCTGCCCAATTT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGTTCAAGTCTTTGGCTaGCATCACTGTCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEVQVFG*HHCLQT
Trigger: AGTTTGGAGACAGTGATGGCAGCCAAAGACTTGAAC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATGTAACTTATTCGCCTaGAGGAGTTTCTCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSECNLFA*RSFSAN
Trigger: GTTGGCAGAGAAACTCCTGCAGGCGAATAAGTTACA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATCACCACACCGGTCATaGTGTCGATGGAAAACTTCT +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKSPHRS*CRWKTS
Trigger: AGAAGTTTTCCATCGACAGCATGACCGGTGTGGTGA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGCTGGATTTCTGTTCTaGATCAAGGGGCTTAGCAAC +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRAGFLF*IKGLSN
Trigger: GTTGCTAAGCCCCTTGATGCAGAACAGAAATCCAGC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATCTACTGCACTGATCTaGAGAATCTCCACTTCTGGC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKSTALI*RISTSG
Trigger: GCCAGAAGTGGAGATTCTGCAGATCAGTGCAGTAGA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACTCATCCCTATCTACTaGACTGATCTGCAGAATCTC +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSELIPIY*TDLQNL
Trigger: GAGATTCTGCAGATCAGTGCAGTAGATAGGGATGAG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTCTGTATTGCGATGGTaGCAGTCTTGTGGTCCATTG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRSVLRW*QSCGPL
Trigger: CAATGGACCACAAGACTGGCACCATCGCAATACAGA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGAGTCGTGTTCTGTATTaGGATGGTGCCAGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRSRVLY*DGASLV
Trigger: CACAAGACTGGCACCATCGCAATACAGAACACGACT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAAGAATCTCTGTCAGATaGCTTCACTTGGACCACCAG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKRISVR*LHLDHQ
Trigger: CTGGTGGTCCAAGTGAAGGCATCTGACAGAGATTCT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGACCCTCCAGTCACTCTaGACATTTTCCACAGCAAAC +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRTLQSL*TFSTAN
Trigger: GTTTGCTGTGGAAAATGTGCAGAGTGACTGGAGGGT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAAGTGTAAGTAATCTCTaGGTTGGACCGGATATCCGC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKSVSNL*VGPDIR
Trigger: GCGGATATCCGGTCCAACGCAGAGATTACTTACACT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAATTCAATCCTGTGTCTaGATCAGTGGCCTGCACTCT +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKIQSCV*ISGLHS
Trigger: AGAGTGCAGGCCACTGATGCAGACACAGGATTGAAT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGAGCCTTCGAAGGAATTaGGGTCAAGGTTGTTTCTCG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRSLRRN*GQGCFS
Trigger: CGAGAAACAACCTTGACCGCAATTCCTTCGAAGGCT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAAGCCTTCGAAGGAATTaGGGTCAAGGTTGTTTCTCG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKSLRRN*GQGCFS
Trigger: CGAGAAACAACCTTGACCGCAATTCCTTCGAAGGCT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTGGAAGTGTGTAAACTaGATAGGAGGGGTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRWKCVN*IGGVGS
Trigger: TGAACCCACCCCTCCTATCCAGTTTACACACTTCCA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGCCAGCTCTGAACTGTaGAGAAATGATGTGAACAAC +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEASSEL*RNDVNN
Trigger: GTTGTTCACATCATTTCTCCACAGTTCAGAGCTGGC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAACCTCGAGTTCAAAATaGGATGTGTGCTGCCTTCTA +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSETSSSK*DVCCLL
Trigger: TAGAAGGCAGCACACATCCCATTTTGAACTCGAGGT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTCAGTGGCTTCGACCTaGATGATTTCACTGTTCACC +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRSVAST*MISLFT
Trigger: GGTGAACAGTGAAATCATCCAGGTCGAAGCCACTGA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATGGGATGAACCTAGGTaGGTTGTCATTAACGTCATC +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEWDEPR*VVINVI
Trigger: GATGACGTTAATGACAACCCACCTAGGTTCATCCCA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGCGCCTTTTCCCGCTCTaGGAGCCTGATTTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRRLFPL*EPDFVK
Trigger: TTTTACAAAATCAGGCTCCCAGAGCGGGAAAAGGCG...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACGCCTTTTCCCGCTCTaGGAGCCTGATTTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKRLFPL*EPDFVK
Trigger: TTTTACAAAATCAGGCTCCCAGAGCGGGAAAAGGCG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGAACGTGCTGGTGAATaGCTTCATGGTCAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEERAGE*LHGQAF
Trigger: AAAAGCTTGACCATGAAGCCATTCACCAGCACGTTC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTGTTCTGTATTGCGATaGTGCCAGTCTTGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRCSVLR*CQSCGP
Trigger: TGGACCACAAGACTGGCACCATCGCAATACAGAACA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGCAAAGGCTCATTGAGTaGGTTCCCTATCGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRQRLIE*VPYRSD
Trigger: ATCACTGCGATAGGGAACCCACTCAATGAGCCTTTG...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACATCTGGATGTTCTCTaGGATCTCAGCGCTATAGAA +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEHLDVL*DLSAIE
Trigger: TTCTATAGCGCTGAGATCCCAGAGAACATCCAGATG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGACCCTGCTTCCCCCTaGCAGGTTTTCAACAATAAA +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRDPASP*QVFNNK
Trigger: TTTATTGTTGAAAACCTGCCAGGGGGAAGCAGGGTC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAATGATGTCTGCGTCTTaGGATTGGTCTAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKMMSAS*DWSRLY
Trigger: GTACAGCCTAGACCAATCCCAAGACGCAGACATCAT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGGGCGTCTTCAGGAATaGTATCAGAATACGAGGTCT +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRGRLQE*YQNTRS
Trigger: AGACCTCGTATTCTGATACCATTCCTGAAGACGCCC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACAAATGCTTTTCCAACTaGATAATTCCAGATCTCTCA +
Preference number: 4 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHKCFSN*IIPDLS
Trigger: TGAGAGATCTGGAATTATCCAGTTGGAAAAGCATTT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGCTCCTTGGCAATCCTTaGTCCACTGCTTTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRLLGNP*STAFKV
Trigger: CACTTTGAAAGCAGTGGACCAAGGATTGCCAAGGAG...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTGGAGCAGTCTTCTGTaGCGGTCAATAAGCATCCAT +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRWSSLL*RSISIH
Trigger: ATGGATGCTTATTGACCGCCACAGAAGACTGCTCCA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGAACTCTTGTATGTCTaGCAGAGGGACACTTGGCAT +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRELLYV*QRDTWH
Trigger: ATGCCAAGTGTCCCTCTGCCAGACATACAAGAGTTC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAAATAGTCAGTATCGATaGCGTTTGGATCAGCCGAGT +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSENSQYR*RLDQPS
Trigger: ACTCGGCTGATCCAAACGCCATCGATACTGACTATT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATGGGCATGTTTTCTATaGTGGGCGCTTCGAAGTTTC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKWACFL*WALRSF
Trigger: GAAACTTCGAAGCGCCCACCATAGAAAACATGCCCA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATGTGGAGAAATGATGTaGACAACTTTCACGGGGGAA +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKCGEMM*TTFTGE
Trigger: TTCCCCCGTGAAAGTTGTTCACATCATTTCTCCACA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATTCTCGAACTTTCACTaGGTAATTGGGTGGGATGAA +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEFSNFH*VIGWDE
Trigger: TTCATCCCACCCAATTACTCAGTGAAAGTTCGAGAA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTGGGTGAGTTTTCCATaGTTTCTGGATAGTACACGG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRWVSFP*FLDSTR
Trigger: CCGTGTACTATCCAGAAATCATGGAAAACTCACCCA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAAGATACATCCTTGGGTaGGTTTTCCATGATTTCTGG +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSERYILG*VFHDFW
Trigger: CCAGAAATCATGGAAAACTCACCCAAGGATGTATCT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGAGTCTTGTGGTCCATTaGGAACTTCTCCCCAATGTT +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRSLVVH*ELLPNV
Trigger: AACATTGGGGAGAAGTTCTCAATGGACCACAAGACT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACAAGTTTCTCCAAAGTaGAAATCTGCCCTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEQVSPK*KSALCH
Trigger: ATGACAGAGGGCAGATTTTCACTTTGGAGAAACTTG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATTTCCAAGTTCTCCTTaGCACTTTCAGAATCCGCCT +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKFPSSP*HFQNPP
Trigger: AGGCGGATTCTGAAAGTGTCAAGGAGAACTTGGAAA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTTTCCAAGTTCTCCTTaGCACTTTCAGAATCCGCCT +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRFPSSP*HFQNPP
Trigger: AGGCGGATTCTGAAAGTGTCAAGGAGAACTTGGAAA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATCCTGTGATGAAGTATaGCACCTGTCTGTTGATCTC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKSCDEV*HLSVDL
Trigger: GAGATCAACAGACAGGTGTCATACTTCATCACAGGA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGTTCAAGTCTTTGGCTaGCATCACTGTCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRVQVFG*HHCLQT
Trigger: AGTTTGGAGACAGTGATGGCAGCCAAAGACTTGAAC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTTCTCAAAGTCCAGCTaGTGGACAATTCTAACTGCG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRFSKSS*WTILTA
Trigger: CGCAGTTAGAATTGTCCAGCAGCTGGACTTTGAGAA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGTATGTCACCATTTCTaGCACTGTCTCTGTCAATGG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKVCHHF*HCLCQW
Trigger: CCATTGACAGAGACAGTGGCAGAAATGGTGACATAC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATTACGTGGCTGTAAATaGCAGAATCTCTGTCAGATG +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSELRGCK*QNLCQM
Trigger: CATCTGACAGAGATTCTGGCATTTACAGCCACGTAA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTTCAGTCTCCCATTCTaGCTGTCGATCACAAAGAAC +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRFSLPF*LSITKN
Trigger: GTTCTTTGTGATCGACAGGCAGAATGGGAGACTGAA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGCCAGCTCTGAACTGTaGAGAAATGATGTGAACAAC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKASSEL*RNDVNN
Trigger: GTTGTTCACATCATTTCTCCACAGTTCAGAGCTGGC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAACCTCGAGTTCAAAATaGGATGTGTGCTGCCTTCTA +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKTSSSK*DVCCLL
Trigger: TAGAAGGCAGCACACATCCCATTTTGAACTCGAGGT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATCACGATCCAAAGGCTaGATAATTTTCACCACACCG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKSRSKG*IIFTTP
Trigger: CGGTGTGGTGAAAATTATCCAGCCTTTGGATCGTGA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTCACGATCCAAAGGCTaGATAATTTTCACCACACCG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRSRSKG*IIFTTP
Trigger: CGGTGTGGTGAAAATTATCCAGCCTTTGGATCGTGA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATGGGATGAACCTAGGTaGGTTGTCATTAACGTCATC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKWDEPR*VVINVI
Trigger: GATGACGTTAATGACAACCCACCTAGGTTCATCCCA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGAACGTGCTGGTGAATaGCTTCATGGTCAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRERAGE*LHGQAF
Trigger: AAAAGCTTGACCATGAAGCCATTCACCAGCACGTTC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGCATCTGGATGTTCTCTaGGATCTCAGCGCTATAGAA +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRHLDVL*DLSAIE
Trigger: TTCTATAGCGCTGAGATCCCAGAGAACATCCAGATG...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACAATTTCTGTTCCAATaGGCGTGTCTTCTGAGATGG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKQFLFQ*ACLLRW
Trigger: CCATCTCAGAAGACACGCCCATTGGAACAGAAATTG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACATCAAGAGTGCATCTaGCCAGGATGGAAAACTGAT +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKHQECI*PGWKTD
Trigger: ATCAGTTTTCCATCCTGGCCAGATGCACTCTTGATG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAACTGGACTCCAAAACTaGGCTGTTATCATTAGCATC +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSETGLQN*AVIISI
Trigger: GATGCTAATGATAACAGCCCAGTTTTGGAGTCCAGT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGACGGTACTCAAACACTaGCGGGTTGTCGTTTATATC +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRTVLKH*RVVVYI
Trigger: GATATAAACGACAACCCGCCAGTGTTTGAGTACCGT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGACATTGAGAAGGTACTaGCCTATGTCCAGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRTLRRY*PMSSFL
Trigger: CAGAAAGCTGGACATAGGCCAGTACCTTCTCAATGT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAACATTGAGAAGGTACTaGCCTATGTCCAGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKTLRRY*PMSSFL
Trigger: CAGAAAGCTGGACATAGGCCAGTACCTTCTCAATGT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAAATAGTCAGTATCGATaGCGTTTGGATCAGCCGAGT +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKNSQYR*RLDQPS
Trigger: ACTCGGCTGATCCAAACGCCATCGATACTGACTATT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGTTTTCGCTGTCTCCTaGGACGATTTTGTACCTTAT +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRVFAVS*DDFVPY
Trigger: ATAAGGTACAAAATCGTCTCAGGAGACAGCGAAAAC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGTTTTCGCTGTCTCCTaGGACGATTTTGTACCTTAT +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKVFAVS*DDFVPY
Trigger: ATAAGGTACAAAATCGTCTCAGGAGACAGCGAAAAC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATTCTCGAACTTTCACTaGGTAATTGGGTGGGATGAA +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKFSNFH*VIGWDE
Trigger: TTCATCCCACCCAATTACTCAGTGAAAGTTCGAGAA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATTTCTTCATCTATCCTaGAGACACCAATTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKFLHLS*RHQFQS
Trigger: GCTCTGGAATTGGTGTCTTCAGGATAGATGAAGAAA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGAGATACATCCTTGGGTaGGTTTTCCATGATTTCTGG +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRRYILG*VFHDFW
Trigger: CCAGAAATCATGGAAAACTCACCCAAGGATGTATCT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAACTTGGACGGTGAAGTaGAAAGCATGTGTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKTWTVK*KACVSS
Trigger: TGAAGAAACACATGCTTTTCACTTCACCGTCCAAGT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAAAGTTAATAGTAAACTaGCTAAAAGGGTCTCCGTCC +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEKLIVN*LKGSPS
Trigger: GGACGGAGACCCTTTTAGTCAGTTTACTATTAACTT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACAAGTTTCTCCAAAGTaGAAATCTGCCCTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKQVSPK*KSALCH
Trigger: ATGACAGAGGGCAGATTTTCACTTTGGAGAAACTTG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACAGGAGTATTGCCTTTaGCAAGGATGTAAAGAACAG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKQEYCL*QGCKEQ
Trigger: CTGTTCTTTACATCCTTGTCAAAGGCAATACTCCTG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGGCTTTCACTTTGAATaGTTTACTCCCTGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRGFHFE*FTPWER
Trigger: TCTTTCCCAGGGAGTAAAGCATTCAAAGTGAAAGCC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAAAATGGGATGTGTGCTaGCTTCTAATGGGTTCTAAA +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEKWDVC*LLMGSK
Trigger: TTTAGAACCCATTAGAAGGCAGCACACATCCCATTT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTGTTCCAATTACAGATaGTTCAGACAGGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRCSNYR*FRQGCG
Trigger: TCCACAACCCTGTCTGAAGCATCTGTAATTGGAACA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATTACGTGGCTGTAAATaGCAGAATCTCTGTCAGATG +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKLRGCK*QNLCQM
Trigger: CATCTGACAGAGATTCTGGCATTTACAGCCACGTAA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGTTTTCAACAATAAATaGCTCATAGGGACTGGACTC +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEVFNNK*LIGTGL
Trigger: GAGTCCAGTCCCTATGAGGCATTTATTGTTGAAAAC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGCGGTATTCCCTCCTTTaGTTCTTATCCTTAGAAAGC +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRRYSLL*FLSLES
Trigger: GCTTTCTAAGGATAAGAACCAAAGGAGGGAATACCG...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACGGTATTCCCTCCTTTaGTTCTTATCCTTAGAAAGC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKRYSLL*FLSLES
Trigger: GCTTTCTAAGGATAAGAACCAAAGGAGGGAATACCG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGAATGCTTTACTCCCTaGGAAAGACCTCACTGTTTT +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKECFTP*ERPHCF
Trigger: AAAACAGTGAGGTCTTTCCCAGGGAGTAAAGCATTC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATTTAAATCTGCGGTCTaGGTTGAGGATGCGGTAAAA +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKFKSAV*VEDAVK
Trigger: TTTTACCGCATCCTCAACCCAGACCGCAGATTTAAA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGCGTGTCTTCTGAGATaGTATAGGTATAAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRACLLR*YRYKRA
Trigger: AGCCCTTTTATACCTATACCATCTCAGAAGACACGC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGACTGGACTCCAAAACTaGGCTGTTATCATTAGCATC +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRTGLQN*AVIISI
Trigger: GATGCTAATGATAACAGCCCAGTTTTGGAGTCCAGT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR TCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGAAGTTAATAGTAAACTaGCTAAAAGGGTCTCCGTCC +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRKLIVN*LKGSPS
Trigger: GGACGGAGACCCTTTTAGTCAGTTTACTATTAACTT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGTGAGATTATACAGTTaGTTCTTCTCAAAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKVRLYS*FFSKSS
Trigger: GCTGGACTTTGAGAAGAAGCAACTGTATAATCTCAC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAAATGATCGTGACTTTTaGTGTGATTTCCAATCAGCT +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSENDRDF*CDFQSA
Trigger: AGCTGATTGGAAATCACAGCAAAAGTCACGATCATT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGTTTTCAACAATAAATaGCTCATAGGGACTGGACTC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKVFNNK*LIGTGL
Trigger: GAGTCCAGTCCCTATGAGGCATTTATTGTTGAAAAC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAAGTTCCCTGTCCAAATaGTTTTCCAACTGGATAATT +
Preference number: 4 (lower is better)
Translates to: EMSYFRGKEQRETLVTSESSLSK*FSNWII
Trigger: AATTATCCAGTTGGAAAAGCATTTGGACAGGGAACT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR GCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGCAATCCTTGGTCCACTaGTTTCAAAGTGAGAGTATA +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRQSLVH*FQSESI
Trigger: TATACTCTCACTTTGAAAGCAGTGGACCAAGGATTG...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACAGTTCACCTGTGTCTaGATTCAGTTTAAACTTCTC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKQFTCV*IQFKLL
Trigger: GAGAAGTTTAAACTGAATCCAGACACAGGTGAACTG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGACAGTGACATTGTACTaGAAGTGTGTAAACTGGATA +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRTVTLY*KCVNWI
Trigger: TATCCAGTTTACACACTTCCAGTACAATGTCACTGT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACTGTCAATGAATACATaGGCAGTGTTTCAAAATCCA +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKLSMNT*AVFQNP
Trigger: TGGATTTTGAAACACTGCCCATGTATTCATTGACAG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGAAGGTTAACAAACACTaGAGCATTATCATTCTGGTC +
Preference number: 4 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRKVNKH*SIIILV
Trigger: GACCAGAATGATAATGCTCCAGTGTTTGTTAACCTT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAAAGGTTAACAAACACTaGAGCATTATCATTCTGGTC +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKKVNKH*SIIILV
Trigger: GACCAGAATGATAATGCTCCAGTGTTTGTTAACCTT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CCA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAAAATGCTTTTCCAACTaGATAATTCCAGATCTCTCA +
Preference number: 4 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKKCFSN*IIPDLS
Trigger: TGAGAGATCTGGAATTATCCAGTTGGAAAAGCATTT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS TCA 90 bp ACTCGTTGGCCTGCTCCACGTGAACTGTCAGCTTGGCCAGGCTGCTaGCCCCACTGCTACCGTACAGCTTCATCCCCCGGTCCGCAGCCA +
Preference number: 5 (lower is better)
Translates to: TRWPAPRELSAWPGC*PHCYRTASSPGPQP
Trigger: TGGCTGCGGACCGGGGGATGAAGCTGTACGGTAGCAGTGGGGTCAGCAGCCTGGCCAAGCTGACAGTTCACGTGGAGCAGGCCAACGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp GTCACCGCGGTTATGATGGGCGCGCACTCGTTGGCCTGCTCCACGTaGACTGTCAGCTTGGCCAGGCTGCTGACCCCACTGCTACCGTAC +
Preference number: 5 (lower is better)
Translates to: VTAVMMGAHSLACST*TVSLARLLTPLLPY
Trigger: GTACGGTAGCAGTGGGGTCAGCAGCCTGGCCAAGCTGACAGTTCACGTGGAGCAGGCCAACGAGTGCGCGCCCATCATAACCGCGGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp AATTGCCCTCCACTTCCAGGGACACCGCGTGCCACTGCCCGTCGTTaGCCTGAATGCTCTGGACGGAGACAATCCCAGGGCCGCTTCCGC +
Preference number: 5 (lower is better)
Translates to: NCPPLPGTPRATARR*PECSGRRQSQGRFR
Trigger: GCGGAAGCGGCCCTGGGATTGTCTCCGTCCAGAGCATTCAGGTCAACGACGGGCAGTGGCACGCGGTGTCCCTGGAAGTGGAGGGCAATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp CGGCTTCAATCTGGTACCGGACCAGCTGCAGCTCGTCGGCGTCAATaGCAGACACGGTGGTTATCTGCTCCCCCACACCTAGGTCTCGGG +
Preference number: 5 (lower is better)
Translates to: RLQSGTGPAAARRRQ*QTRWLSAPPHLGLG
Trigger: CCCGAGACCTAGGTGTGGGGGAGCAGATAACCACCGTGTCTGCCATTGACGCCGACGAGCTGCAGCTGGTCCGGTACCAGATTGAAGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp CCATGCACGTTCCTCCGTAGAGGCAGGGGTTGGAGGAGCACGGGTTaGCGCTCACCTCACAGAACGTCCCTACGTACAACGCGCTGCACT +
Preference number: 5 (lower is better)
Translates to: PCTFLRRGRGWRSTG*RSPHRTSLRTTRCT
Trigger: AGTGCAGCGCGTTGTACGTAGGGACGTTCTGTGAGGTGAGCGTCAACCCGTGCTCCTCCAACCCCTGCCTCTACGGAGGAACGTGCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp CCTCTTCGAAGTGGCCGTCGTCCCCGCTCTCGTAGTCGCTCATCATaGCCTCAGACTCCACTTCACAGCACGCTGACACGTCGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: PLRSGRRPRSRSRSS*PQTPLHSTLTRRSR
Trigger: CCTGCTCCGACGTGTCAGCGTGCTGTGAAGTGGAGTCTGAGGTCATGATGAGCGACTACGAGAGCGGGGACGACGGCCACTTCGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp TTCCCTCGGCCAGTCCGATGTTCCACGGGGTGGACACGTAGTGGTTaGGAGAGGCATCCTCACAGTGCTTCCCTCTGTACTCCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: FPRPVRCSTGWTRSG*ERHPHSASLCTPGC
Trigger: GCAGCCAGGAGTACAGAGGGAAGCACTGTGAGGATGCCTCTCCCAACCACTACGTGTCCACCCCGTGGAACATCGGACTGGCCGAGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp GGAGCTAAGCGACTGCACCTCAGACAGGCTCTCCCGGGCACTGTATaGCTGGGAGGGCTTTTCCTCCAGGGGCTTCTTAGAGAGACAGGG +
Preference number: 5 (lower is better)
Translates to: GAKRLHLRQALPGTV*LGGLFLQGLLRETG
Trigger: CCCTGTCTCTCTAAGAAGCCCCTGGAGGAAAAGCCCTCCCAGCCATACAGTGCCCGGGAGAGCCTGTCTGAGGTGCAGTCGCTTAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000098796.10
ENSMUST00000186342.3
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp CTCGTAGTCGCTCATCATGACCTCAGACTCCACTTCACAGCACGCTaGCACGTCGGAGCAGGAAGCCGTCGAGGCGTACACGGACATGGG +
Preference number: 5 (lower is better)
Translates to: LVVAHHDLRLHFTAR*HVGAGSRRGVHGHG
Trigger: CCCATGTCCGTGTACGCCTCGACGGCTTCCTGCTCCGACGTGTCAGCGTGCTGTGAAGTGGAGTCTGAGGTCATGATGAGCGACTACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp AGACCACTCCCGTTTTGGGTTCGATGGAGAACCTGCCGTGCTCGTTaGCTTCCTCGATGCTGTAGGAGAGCTCCGCATTGGGCCCCTCGT +
Preference number: 5 (lower is better)
Translates to: RPLPFWVRWRTCRAR*LPRCCRRAPHWAPR
Trigger: ACGAGGGGCCCAATGCGGAGCTCTCCTACAGCATCGAGGAAGGCAACGAGCACGGCAGGTTCTCCATCGAACCCAAAACGGGAGTGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp GTTGAACCTCTGCCGACTCCGGGAGGAAGATCCCAAGCTACCTGCTaGAGGCATGTCCCTGGGTGGGTGTATGGACTCGAACTGGTCGCT +
Preference number: 5 (lower is better)
Translates to: VEPLPTPGGRSQATC*RHVPGWVYGLELVA
Trigger: AGCGACCAGTTCGAGTCCATACACCCACCCAGGGACATGCCTGCAGCAGGTAGCTTGGGATCTTCCTCCCGGAGTCGGCAGAGGTTCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp CAGGTTGAACCTCTGCCGACTCCGGGAGGAAGATCCCAAGCTACCTaGTGCAGGCATGTCCCTGGGTGGGTGTATGGACTCGAACTGGTC +
Preference number: 5 (lower is better)
Translates to: QVEPLPTPGGRSQAT*CRHVPGWVYGLELV
Trigger: GACCAGTTCGAGTCCATACACCCACCCAGGGACATGCCTGCAGCAGGTAGCTTGGGATCTTCCTCCCGGAGTCGGCAGAGGTTCAACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp GAAATCGGCTCCGAGGACGGCTTGGGTTTGGAGATCCACTCGATATaGAGCCTGGTGGTGGACGACTTCTGGGGGCGCCCGTTGTCAACT +
Preference number: 5 (lower is better)
Translates to: EIGSEDGLGLEIHSI*SLVVDDFWGRPLST
Trigger: AGTTGACAACGGGCGCCCCCAGAAGTCGTCCACCACCAGGCTCCATATCGAGTGGATCTCCAAACCCAAGCCGTCCTCGGAGCCGATTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp CTAAGCGACTGCACCTCAGACAGGCTCTCCCGGGCACTGTATGGCTaGGAGGGCTTTTCCTCCAGGGGCTTCTTAGAGAGACAGGGATCC +
Preference number: 5 (lower is better)
Translates to: LSDCTSDRLSRALYG*EGFSSRGFLERQGS
Trigger: GGATCCCTGTCTCTCTAAGAAGCCCCTGGAGGAAAAGCCCTCCCAGCCATACAGTGCCCGGGAGAGCCTGTCTGAGGTGCAGTCGCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000098796.10
ENSMUST00000186342.3
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp CTGCAGGCATGTCCCTGGGTGGGTGTATGGACTCGAACTGGTCGCTaGACTCTGGAGGCAATGGTGGCAGTTCATCGGGTGCAGGGAAGT +
Preference number: 5 (lower is better)
Translates to: LQACPWVGVWTRTGR*TLEAMVAVHRVQGS
Trigger: ACTTCCCTGCACCCGATGAACTGCCACCATTGCCTCCAGAGTTCAGCGACCAGTTCGAGTCCATACACCCACCCAGGGACATGCCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp GTTGGCACCCTGATCACAGTCCTCCACGGTGATGATGGCGTAGGTTaGGTCCTTGTCCAGCTCAGAGGGCGACAACGTCACCGCGGTTAT +
Preference number: 5 (lower is better)
Translates to: VGTLITVLHGDDGVG*VLVQLRGRQRHRGY
Trigger: ATAACCGCGGTGACGTTGTCGCCCTCTGAGCTGGACAAGGACCCAACCTACGCCATCATCACCGTGGAGGACTGTGATCAGGGTGCCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp GTTATTGAGAGTAATCGTGGCGAGGACTTCGACTTCCCGGCGGTATaGCAAGCCCCAGTCAGACGCACGGATCCTCAGCGTGTACACGCG +
Preference number: 5 (lower is better)
Translates to: VIESNRGEDFDFPAV*QAPVRRTDPQRVHA
Trigger: CGCGTGTACACGCTGAGGATCCGTGCGTCTGACTGGGGCTTGCCATACCGCCGGGAAGTCGAAGTCCTCGCCACGATTACTCTCAATAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp GTGAGATTCGCGAAGCGAATGGCGACGGTGTGGTTCAGCATCTCCTaGGTCACTTGTTGGATGTGCACGGTGATGTCGGCCACCGTGGTG +
Preference number: 5 (lower is better)
Translates to: VRFAKRMATVWFSIS*VTCWMCTVMSATVV
Trigger: CACCACGGTGGCCGACATCACCGTGCACATCCAACAAGTGACCCAGGAGATGCTGAACCACACCGTCGCCATTCGCTTCGCGAATCTCAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS-3UTR CAA 90 bp GGCGTTTGGATCAGCCGAGTAGAGGGGTGTGTGTTCGTCAATAGCCTCGTAATTCTGTCTGAGGGCGAGTaGGAAGGCGGCGGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: GVWISRVEGCVFVNSLVILSEGE*EGGGGG
Trigger: GCCTCCACCGCCGCCTTCCAACTCGCCCTCAGACAG...AATTACGAGGCTATTGACGAACACACACCCCTCTACTCGGCTGATCCAAACGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186342.3
CDS TCA 90 bp CTCGCTGGAAGTTGCGCCAGTAGTCACCAACAAACTCCTCCGGGGTaGGATTCGCGAAGCGAATGGCGACGGTGTGGTTCAGCATCTCCT +
Preference number: 5 (lower is better)
Translates to: LAGSCASSHQQTPPG*DSRSEWRRCGSASP
Trigger: AGGAGATGCTGAACCACACCGTCGCCATTCGCTTCGCGAATCTCACCCCGGAGGAGTTTGTTGGTGACTACTGGCGCAACTTCCAGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp GTCGTAGTCAAAGTCCCAGCTAGGCTTCTGTATGGAGTCGCTGTCTaGGGGCGAGTTGGAAGGCGGCGGTGGAGGCAAGTTTGGAGCTAC +
Preference number: 5 (lower is better)
Translates to: VVVKVPARLLYGVAV*GRVGRRRWRQVWSY
Trigger: GTAGCTCCAAACTTGCCTCCACCGCCGCCTTCCAACTCGCCCTCAGACAGCGACTCCATACAGAAGCCTAGCTGGGACTTTGACTACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000098796.10
ENSMUST00000186342.3
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp ACGTGGGTGCCGCCTGACCTCTCGACAAAGAGTAAGACGTCCAGATaGGAATGGGGTTCGGAGGGCTGCAGGCTGACGATCTGTATGTCA +
Preference number: 5 (lower is better)
Translates to: TWVPPDLSTKSKTSR*EWGSEGCRLTICMS
Trigger: TGACATACAGATCGTCAGCCTGCAGCCCTCCGAACCCCATTCGCATCTGGACGTCTTACTCTTTGTCGAGAGGTCAGGCGGCACCCACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp GGTTGGGAGAGGCATCCTCACAGTGCTTCCCTCTGTACTCCTGGCTaGAGTTACAGTGATAGGAGCCGTGTGTGTTCTCGCAAAGGGCCC +
Preference number: 5 (lower is better)
Translates to: GWERHPHSASLCTPG*SYSDRSRVCSRKGP
Trigger: GGGCCCTTTGCGAGAACACACACGGCTCCTATCACTGTAACTGCAGCCAGGAGTACAGAGGGAAGCACTGTGAGGATGCCTCTCCCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp CTTCGAAGGAATTGCGGTCAAGGTTGTTTCTCGAGTCGCTTGGAATaGTGGGAGTGTAGGAAATGGGACGGACCGGCACCTGGGGCGGGA +
Preference number: 5 (lower is better)
Translates to: LRRNCGQGCFSSRLE*WECRKWDGPAPGAG
Trigger: TCCCGCCCCAGGTGCCGGTCCGTCCCATTTCCTACACTCCCAGCATTCCAAGCGACTCGAGAAACAACCTTGACCGCAATTCCTTCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000098796.10
ENSMUST00000186342.3
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp GTGATTTCCGCGTTGGCCTCGATATCCCGACTTGCGGCGTACACCTaGAGAACCTCCGTCCCAATGACAATGTCCTCAGACACACTGGCG +
Preference number: 5 (lower is better)
Translates to: VISALASISRLAAYT*RTSVPMTMSSDTLA
Trigger: CGCCAGTGTGTCTGAGGACATTGTCATTGGGACGGAGGTTCTCCAGGTGTACGCCGCAAGTCGGGATATCGAGGCCAACGCGGAAATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp CGAAGGAATTGCGGTCAAGGTTGTTTCTCGAGTCGCTTGGAATGCTaGGAGTGTAGGAAATGGGACGGACCGGCACCTGGGGCGGGATGT +
Preference number: 5 (lower is better)
Translates to: RRNCGQGCFSSRLEC*ECRKWDGPAPGAGC
Trigger: ACATCCCGCCCCAGGTGCCGGTCCGTCCCATTTCCTACACTCCCAGCATTCCAAGCGACTCGAGAAACAACCTTGACCGCAATTCCTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000098796.10
ENSMUST00000186342.3
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp GGAGCCTTCGAAGGAATTGCGGTCAAGGTTGTTTCTCGAGTCGCTTaGAATGCTGGGAGTGTAGGAAATGGGACGGACCGGCACCTGGGG +
Preference number: 5 (lower is better)
Translates to: GAFEGIAVKVVSRVA*NAGSVGNGTDRHLG
Trigger: CCCCAGGTGCCGGTCCGTCCCATTTCCTACACTCCCAGCATTCCAAGCGACTCGAGAAACAACCTTGACCGCAATTCCTTCGAAGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000098796.10
ENSMUST00000186342.3
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp TGGGTGTATGGACTCGAACTGGTCGCTGAACTCTGGAGGCAATGGTaGCAGTTCATCGGGTGCAGGGAAGTCCTCTGGTGGGGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: WVYGLELVAELWRQW*QFIGCREVLWWGWK
Trigger: TTTCCACCCCCACCAGAGGACTTCCCTGCACCCGATGAACTGCCACCATTGCCTCCAGAGTTCAGCGACCAGTTCGAGTCCATACACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS-3UTR CAA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACTGTCTGAGGGCGAGTaGGAAGGCGGCGGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: NTTADVTDSISRFMKVQALSEGE*EGGGGG
Trigger: GCCTCCACCGCCGCCTTCCAACTCGCCCTCAGACAG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS TCA 90 bp ATTCTGGTCTTCGACGGTGACTTTCACCACGACGTGGGCCACCGCTaGCGGCTCGTGTTCCTTAGTCACCTCTACCACCACGTCAAACGT +
Preference number: 5 (lower is better)
Translates to: ILVFDGDFHHDVGHR*RLVFLSHLYHHVKR
Trigger: ACGTTTGACGTGGTGGTAGAGGTGACTAAGGAACACGAGCCGTCAGCGGTGGCCCACGTCGTGGTGAAAGTCACCGTCGAAGACCAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp TCTCTGCGTTGGACCGGATATCCGCGTCTGTGGCAGAGACCTGCATaGCCAGCTTCCCGGGAAGGGCGTCTTCAGGAATGGTATCAGAAT +
Preference number: 5 (lower is better)
Translates to: SLRWTGYPRLWQRPA*PASREGRLQEWYQN
Trigger: ATTCTGATACCATTCCTGAAGACGCCCTTCCCGGGAAGCTGGTCATGCAGGTCTCTGCCACAGACGCGGATATCCGGTCCAACGCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp CGGACATATCGGCGGGGTAGAAATTGGGCAGGTACTGATTCAGGTTaGACCTCTGCCGACTCCGGGAGGAAGATCCCAAGCTACCTGCTG +
Preference number: 5 (lower is better)
Translates to: RTYRRGRNWAGTDSG*TSADSGRKIPSYLL
Trigger: CAGCAGGTAGCTTGGGATCTTCCTCCCGGAGTCGGCAGAGGTTCAACCTGAATCAGTACCTGCCCAATTTCTACCCCGCCGATATGTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp GTAATCTCTGCGTTGGACCGGATATCCGCGTCTGTGGCAGAGACCTaGATGACCAGCTTCCCGGGAAGGGCGTCTTCAGGAATGGTATCA +
Preference number: 5 (lower is better)
Translates to: VISALDRISASVAET*MTSFPGRASSGMVS
Trigger: TGATACCATTCCTGAAGACGCCCTTCCCGGGAAGCTGGTCATGCAGGTCTCTGCCACAGACGCGGATATCCGGTCCAACGCAGAGATTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp GGAGGCAAGTTTGGAGCTACGCTGCACACAGCCACGGCTTTTCGATaGCCGTGCATAGACTCGGGGTTGAAGGTGCTGAATTCTGGATGC +
Preference number: 5 (lower is better)
Translates to: GGKFGATLHTATAFR*PCIDSGLKVLNSGC
Trigger: GCATCCAGAATTCAGCACCTTCAACCCCGAGTCTATGCACGGGCATCGAAAAGCCGTGGCTGTGTGCAGCGTAGCTCCAAACTTGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000098796.10
ENSMUST00000186342.3
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp GGAGCACGGTGGAGAACAACCGGGGTTCCTCTGTGGCTTGGTCCCTaGCCTCGATCTTTAGGTAATGCACAGGTTGCACTTCACGATCCA +
Preference number: 5 (lower is better)
Translates to: GARWRTTGVPLWLGP*PRSLGNAQVALHDP
Trigger: TGGATCGTGAAGTGCAACCTGTGCATTACCTAAAGATCGAGGCCAGGGACCAAGCCACAGAGGAACCCCGGTTGTTCTCCACCGTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp GTGACACCTTCAGGAGCACGGTGGAGAACAACCGGGGTTCCTCTGTaGCTTGGTCCCTGGCCTCGATCTTTAGGTAATGCACAGGTTGCA +
Preference number: 5 (lower is better)
Translates to: VTPSGARWRTTGVPL*LGPWPRSLGNAQVA
Trigger: TGCAACCTGTGCATTACCTAAAGATCGAGGCCAGGGACCAAGCCACAGAGGAACCCCGGTTGTTCTCCACCGTGCTCCTGAAGGTGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp GGAGCATTATCATTCTGGTCTTCGACGGTGACTTTCACCACGACGTaGGCCACCGCTGACGGCTCGTGTTCCTTAGTCACCTCTACCACC +
Preference number: 5 (lower is better)
Translates to: GALSFWSSTVTFTTT*ATADGSCSLVTSTT
Trigger: GGTGGTAGAGGTGACTAAGGAACACGAGCCGTCAGCGGTGGCCCACGTCGTGGTGAAAGTCACCGTCGAAGACCAGAATGATAATGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS-3UTR CAA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAACGACCGACGTCCCTTaGGCAGCGCTGGACCCGATG +
Preference number: 5 (lower is better)
Translates to: NTTADVTDSISRFMKVQATTDVP*AALDPM
Trigger: CATCGGGTCCAGCGCTGCCAAAGGGACGTCGGTCGT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACCCATGCTTTGTCCCTaGCTGGCGGAGGTGGCCACC +
Preference number: 5 (lower is better)
Translates to: NTTADVTDSISRFMKVQAPMLCP*LAEVAT
Trigger: GGTGGCCACCTCCGCCAGCAAGGGACAAAGCATGGG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCTGTCTGAGGGCGAGTaGGAAGGCGGCGGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHLSEGE*EGGGGG
Trigger: GCCTCCACCGCCGCCTTCCAACTCGCCCTCAGACAG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS TCA 90 bp GCCACCGATGATGTCAAACCACAGAGGCATGCCAGGGGGCTCAACTaGGATCACGCCGATCATGTGAGCCACCGGATCACTTTCCATTAC +
Preference number: 5 (lower is better)
Translates to: ATDDVKPQRHARGLN*DHADHVSHRITFHY
Trigger: GTAATGGAAAGTGATCCGGTGGCTCACATGATCGGCGTGATCTCAGTTGAGCCCCCTGGCATGCCTCTGTGGTTTGACATCATCGGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS TCA 90 bp CCAGCGGCAAGATGGCAGGAGGGTGGATGCTTTCCTCGATCACCCTaGTGTCAATGTGTGTCATGGATGACAGCTGAGGCTTTCCGCTGT +
Preference number: 5 (lower is better)
Translates to: PAARWQEGGCFPRSP*CQCVSWMTAEAFRC
Trigger: ACAGCGGAAAGCCTCAGCTGTCATCCATGACACACATTGACATCAGGGTGATCGAGGAAAGCATCCACCCTCCTGCCATCTTGCCGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp AGAGTAAGACGTCCAGATGCGAATGGGGTTCGGAGGGCTGCAGGCTaGCGATCTGTATGTCATTCTTCCGGACGCCCAGGATGTTGCGTA +
Preference number: 5 (lower is better)
Translates to: RVRRPDANGVRRAAG*RSVCHSSGRPGCCV
Trigger: TACGCAACATCCTGGGCGTCCGGAAGAATGACATACAGATCGTCAGCCTGCAGCCCTCCGAACCCCATTCGCATCTGGACGTCTTACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp AGGAGTTTCTCTGCCAACATTTTGGCAACACCGGTCTCCTCGCACTaGAAGTTGACCGGCTTGCGACTGGCAGCCACCGTTAGGTTGATG +
Preference number: 5 (lower is better)
Translates to: RSFSANILATPVSSH*KLTGLRLAATVRLM
Trigger: CATCAACCTAACGGTGGCTGCCAGTCGCAAGCCGGTCAACTTGCAGTGCGAGGAGACCGGTGTTGCCAAAATGTTGGCAGAGAAACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp ACTTTTTGGACGAGACCACTCCCGTTTTGGGTTCGATGGAGAACCTaGCGTGCTCGTTGCCTTCCTCGATGCTGTAGGAGAGCTCCGCAT +
Preference number: 5 (lower is better)
Translates to: TFWTRPLPFWVRWRT*RARCLPRCCRRAPH
Trigger: ATGCGGAGCTCTCCTACAGCATCGAGGAAGGCAACGAGCACGGCAGGTTCTCCATCGAACCCAAAACGGGAGTGGTCTCGTCCAAAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp CACGGGCATGGCTTTGTTCATGACAGTGATGGGAACCAGAACTTCTaGAGAGAAAGCTGGACTCCCTCCGTCCTTGGCGACCACTGTGAC +
Preference number: 5 (lower is better)
Translates to: HGHGFVHDSDGNQNF*RESWTPSVLGDHCD
Trigger: GTCACAGTGGTCGCCAAGGACGGAGGGAGTCCAGCTTTCTCTGCAGAAGTTCTGGTTCCCATCACTGTCATGAACAAAGCCATGCCCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp TATGATGGCGTAGGTGATTTCCGCGTTGGCCTCGATATCCCGACTTaGGGCGTACACCTGGAGAACCTCCGTCCCAATGACAATGTCCTC +
Preference number: 5 (lower is better)
Translates to: YDGVGDFRVGLDIPT*GVHLENLRPNDNVL
Trigger: GAGGACATTGTCATTGGGACGGAGGTTCTCCAGGTGTACGCCGCAAGTCGGGATATCGAGGCCAACGCGGAAATCACCTACGCCATCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp TCGACAAAGAGTAAGACGTCCAGATGCGAATGGGGTTCGGAGGGCTaGAGGCTGACGATCTGTATGTCATTCTTCCGGACGCCCAGGATG +
Preference number: 5 (lower is better)
Translates to: STKSKTSRCEWGSEG*RLTICMSFFRTPRM
Trigger: CATCCTGGGCGTCCGGAAGAATGACATACAGATCGTCAGCCTGCAGCCCTCCGAACCCCATTCGCATCTGGACGTCTTACTCTTTGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp AAGTTTGGAGCTACGCTGCACACAGCCACGGCTTTTCGATGCCCGTaGATAGACTCGGGGTTGAAGGTGCTGAATTCTGGATGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: KFGATLHTATAFRCP*IDSGLKVLNSGCSG
Trigger: CCCAGAGCATCCAGAATTCAGCACCTTCAACCCCGAGTCTATGCACGGGCATCGAAAAGCCGTGGCTGTGTGCAGCGTAGCTCCAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000098796.10
ENSMUST00000186342.3
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp GAACTGGTCGCTGAACTCTGGAGGCAATGGTGGCAGTTCATCGGGTaGAGGGAAGTCCTCTGGTGGGGGTGGAAAGTCACTTTCAATGTC +
Preference number: 5 (lower is better)
Translates to: ELVAELWRQWWQFIG*REVLWWGWKVTFNV
Trigger: GACATTGAAAGTGACTTTCCACCCCCACCAGAGGACTTCCCTGCACCCGATGAACTGCCACCATTGCCTCCAGAGTTCAGCGACCAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp GGGGTGGGTTCAAGTCTTTGGCTGCCATCACTGTCTCCAAACTGCTaGAGGAAGAGGAGCAGAAGCAGAAGCAAGGTCAAGTGTCTCCCC +
Preference number: 5 (lower is better)
Translates to: GVGSSLWLPSLSPNC*RKRSRSRSKVKCLP
Trigger: GGGGAGACACTTGACCTTGCTTCTGCTTCTGCTCCTCTTCCTCCAGCAGTTTGGAGACAGTGATGGCAGCCAAAGACTTGAACCCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp TTGGCATCCAGAACCGTGACGTCCAGAAGGCGCCAGGCAGCCCTCTaGGGTATACCGAGGTCGTACACGGTAATATTCAGGGTGTATTTG +
Preference number: 5 (lower is better)
Translates to: LASRTVTSRRRQAAL*GIPRSYTVIFRVYL
Trigger: CAAATACACCCTGAATATTACCGTGTACGACCTCGGTATACCCCAGAGGGCTGCCTGGCGCCTTCTGGACGTCACGGTTCTGGATGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp AACTGGGGGCGGTGGTCATTGGTATCTATTACTTTGATGAGGACCTaGGTGAGGATCGTGGTGGTCCCATCTGTTGCCTCCACGGTGAGG +
Preference number: 5 (lower is better)
Translates to: NWGRWSLVSITLMRT*VRIVVVPSVASTVR
Trigger: CCTCACCGTGGAGGCAACAGATGGGACCACCACGATCCTCACCCAGGTCCTCATCAAAGTAATAGATACCAATGACCACCGCCCCCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp GTGCCGCCTGACCTCTCGACAAAGAGTAAGACGTCCAGATGCGAATaGGGTTCGGAGGGCTGCAGGCTGACGATCTGTATGTCATTCTTC +
Preference number: 5 (lower is better)
Translates to: VPPDLSTKSKTSRCE*GSEGCRLTICMSFF
Trigger: GAAGAATGACATACAGATCGTCAGCCTGCAGCCCTCCGAACCCCATTCGCATCTGGACGTCTTACTCTTTGTCGAGAGGTCAGGCGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp CAAGGTTGTTTCTCGAGTCGCTTGGAATGCTGGGAGTGTAGGAAATaGGACGGACCGGCACCTGGGGCGGGATGTCGGAGTAAATGTTCT +
Preference number: 5 (lower is better)
Translates to: QGCFSSRLECWECRK*DGPAPGAGCRSKCS
Trigger: AGAACATTTACTCCGACATCCCGCCCCAGGTGCCGGTCCGTCCCATTTCCTACACTCCCAGCATTCCAAGCGACTCGAGAAACAACCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000098796.10
ENSMUST00000186342.3
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp TCTGATGTATCCCAGTGGTACCCATTGTCATCACAGGACTCTGACTaGAAGGAGCTAAGCGACTGCACCTCAGACAGGCTCTCCCGGGCA +
Preference number: 5 (lower is better)
Translates to: SDVSQWYPLSSQDSD*KELSDCTSDRLSRA
Trigger: TGCCCGGGAGAGCCTGTCTGAGGTGCAGTCGCTTAGCTCCTTCCAGTCAGAGTCCTGTGATGACAATGGGTACCACTGGGATACATCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098796.10
ENSMUST00000191428.7
CDS CCA 90 bp CTCTGGAGGCAATGGTGGCAGTTCATCGGGTGCAGGGAAGTCCTCTaGTGGGGGTGGAAAGTCACTTTCAATGTCATAACCCCCAGGGTA +
Preference number: 5 (lower is better)
Translates to: LWRQWWQFIGCREVL*WGWKVTFNVITPRV
Trigger: TACCCTGGGGGTTATGACATTGAAAGTGACTTTCCACCCCCACCAGAGGACTTCCCTGCACCCGATGAACTGCCACCATTGCCTCCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp ACGCTGACACGTCGGAGCAGGAAGCCGTCGAGGCGTACACGGACATaGGCATGTTTTCTATGGTGGGCGCTTCGAAGTTTCTTTGATACC +
Preference number: 5 (lower is better)
Translates to: TLTRRSRKPSRRTRT*ACFLWWALRSFFDT
Trigger: GGTATCAAAGAAACTTCGAAGCGCCCACCATAGAAAACATGCCCATGTCCGTGTACGCCTCGACGGCTTCCTGCTCCGACGTGTCAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCGGACGCCCAGGATGTaGCGTAGGGCTCGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHRTPRM*RRARWK
Trigger: CTTCCAGCGAGCCCTACGCAACATCCTGGGCGTCCG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCCCATGCTTTGTCCCTaGCTGGCGGAGGTGGCCACC +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHPMLCP*LAEVAT
Trigger: GGTGGCCACCTCCGCCAGCAAGGGACAAAGCATGGG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCGCCTCGCCCATGCTTaGTCCCTTGCTGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHRLAHA*SLAGGG
Trigger: ACCTCCGCCAGCAAGGGACAAAGCATGGGCGAGGCG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS TCA 90 bp CGGTGCCCTTGTCCACATCAAAGTGGCTGTCATAGTTGCCACCGATaGTGTCAAACCACAGAGGCATGCCAGGGGGCTCAACTGAGATCA +
Preference number: 5 (lower is better)
Translates to: RCPCPHQSGCHSCHR*CQTTEACQGAQLRS
Trigger: TGATCTCAGTTGAGCCCCCTGGCATGCCTCTGTGGTTTGACATCATCGGTGGCAACTATGACAGCCACTTTGATGTGGACAAGGGCACCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS TCA 90 bp CAGCAGTGTAAAGAGCGCCTGTTGCGGGATCGAGGCGGAATTTCTTaGGGCTGGCTGGATCGATGCTGCTCTGCAGAGTGTAGATCAACT +
Preference number: 5 (lower is better)
Translates to: QQCKERLLRDRGGIS*GWLDRCCSAECRST
Trigger: AGTTGATCTACACTCTGCAGAGCAGCATCGATCCAGCCAGCCTCAAGAAATTCCGCCTCGATCCCGCAACAGGCGCTCTTTACACTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp CGATATCCCGACTTGCGGCGTACACCTGGAGAACCTCCGTCCCAATaGCAATGTCCTCAGACACACTGGCGCCATATTCACGGTACTCAA +
Preference number: 5 (lower is better)
Translates to: RYPDLRRTPGEPPSQ*QCPQTHWRHIHGTQ
Trigger: TTGAGTACCGTGAATATGGCGCCAGTGTGTCTGAGGACATTGTCATTGGGACGGAGGTTCTCCAGGTGTACGCCGCAAGTCGGGATATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp GTCTCCGATGATGTCAAACCACAGAGGCATGCCAGGGGGCTCAACTaGGATCACGCCGATCATGTGAGCCACCGGATCACTTTCCATTAC +
Preference number: 5 (lower is better)
Translates to: VSDDVKPQRHARGLN*DHADHVSHRITFHY
Trigger: GTAATGGAAAGTGATCCGGTGGCTCACATGATCGGCGTGATCTCAGTTGAGCCCCCTGGCATGCCTCTGTGGTTTGACATCATCGGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215588.2
CDS GCA 90 bp AACAAATCCAACTCATTTCCGGCTTCAATCTGGTACCGGACCAGCTaGAGCTCGTCGGCGTCAATGGCAGACACGGTGGTTATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: NKSNSFPASIWYRTS*SSSASMADTVVICS
Trigger: GGAGCAGATAACCACCGTGTCTGCCATTGACGCCGACGAGCTGCAGCTGGTCCGGTACCAGATTGAAGCCGGAAATGAGTTGGATTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp CTCCCCAATGTTGCCTTCAGTGATGGAGTACATGACCTGGGAGAATaGCTTGGAGTCAGCGTCTGTGGCGTTCACCGTGATGACGTTCAC +
Preference number: 5 (lower is better)
Translates to: LPNVAFSDGVHDLGE*LGVSVCGVHRDDVH
Trigger: GTGAACGTCATCACGGTGAACGCCACAGACGCTGACTCCAAGGCATTCTCCCAGGTCATGTACTCCATCACTGAAGGCAACATTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp CCAGTCGACGGCCCCGACGGCTTTCACTTTGAATGCTTTACTCCCTaGGAAAGACCTCACTGTTTTAAACTGCTGAAGGAGGTCGCCAGC +
Preference number: 5 (lower is better)
Translates to: PVDGPDGFHFECFTP*ERPHCFKLLKEVAS
Trigger: GCTGGCGACCTCCTTCAGCAGTTTAAAACAGTGAGGTCTTTCCCAGGGAGTAAAGCATTCAAAGTGAAAGCCGTCGGGGCCGTCGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp GGTTGTCGTTCTCATCCCGCACGTGCACCACCACCGTTGTGTTGGTaGACAAACCGGCCATGTTGGTCCCTTGCACTGTCAATGAATACA +
Preference number: 5 (lower is better)
Translates to: GCRSHPARAPPPLCW*TNRPCWSLALSMNT
Trigger: TGTATTCATTGACAGTGCAAGGGACCAACATGGCCGGTTTGTCCACCAACACAACGGTGGTGGTGCACGTGCGGGATGAGAACGACAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp TCATCACAGAACTTCCACGGGCAATCCAGCCCCGCACAGAGCTTCTaGAACACTTCCAGGATCCTCACGCCAATGATTTCCTCAACGTCC +
Preference number: 5 (lower is better)
Translates to: SSQNFHGQSSPAQSF*NTSRILTPMISSTS
Trigger: GGACGTTGAGGAAATCATTGGCGTGAGGATCCTGGAAGTGTTCCAGAAGCTCTGTGCGGGGCTGGATTGCCCGTGGAAGTTCTGTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp AAGAAAGCCGTGGTTGGCCCCAAACGTTTGTCTTCAGGTTCAGCCTaGCGCTTCTTCTTCCGACTGATCATCTTCCGGCAGAGGACGAAC +
Preference number: 5 (lower is better)
Translates to: KKAVVGPKRLSSGSA*RFFFRLIIFRQRTN
Trigger: GTTCGTCCTCTGCCGGAAGATGATCAGTCGGAAGAAGAAGCGCCAGGCTGAACCTGAAGACAAACGTTTGGGGCCAACCACGGCTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp CCCGTGCATAGACTCGGGGTTGAAGGTGCTGAATTCTGGATGCTCTaGGATCGCGGAGCCTTCGAAGGAATTGCGGTCAAGGTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: PVHRLGVEGAEFWML*DRGAFEGIAVKVVS
Trigger: AGAAACAACCTTGACCGCAATTCCTTCGAAGGCTCCGCGATCCCAGAGCATCCAGAATTCAGCACCTTCAACCCCGAGTCTATGCACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000098796.10
ENSMUST00000186342.3
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS-3UTR CAA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATGCAAGTTGACCGGCTaGCGACTGGCAGCCACCGTT +
Preference number: 5 (lower is better)
Translates to: NTTADVTDSISRFMKVQACKLTG*RLAATV
Trigger: AACGGTGGCTGCCAGTCGCAAGCCGGTCAACTTGCA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGGCTCCGAGGACGGCTaGGGTTTGGAGATCCACTCG +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHGSEDG*GLEIHS
Trigger: CGAGTGGATCTCCAAACCCAAGCCGTCCTCGGAGCC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS TCA 90 bp CTAATGGAATACCGGATCTCTCCGTCTCTGCCTGTGTCTTCGTCGTaGGCTGACACGGTCATGACTGATGAGCCAGTAGGGACGTCTTCT +
Preference number: 5 (lower is better)
Translates to: LMEYRISPSLPVSSS*ADTVMTDEPVGTSS
Trigger: AGAAGACGTCCCTACTGGCTCATCAGTCATGACCGTGTCAGCTCACGACGAAGACACAGGCAGAGACGGAGAGATCCGGTATTCCATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp GTCGGGGAGTCACGAAACTCAGTCTGGCCGTGCTGTGAGTGGACATaGCGTTTTCATCCACAGACACCTTCTCATCACAGAACTTCCACG +
Preference number: 5 (lower is better)
Translates to: VGESRNSVWPCCEWT*RFHPQTPSHHRTST
Trigger: CGTGGAAGTTCTGTGATGAGAAGGTGTCTGTGGATGAAAACGTCATGTCCACTCACAGCACGGCCAGACTGAGTTTCGTGACTCCCCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp GTTCTGTGGTGTCGGGGAGTCACGAAACTCAGTCTGGCCGTGCTGTaGGTGGACATGACGTTTTCATCCACAGACACCTTCTCATCACAG +
Preference number: 5 (lower is better)
Translates to: VLWCRGVTKLSLAVL*VDMTFSSTDTFSSQ
Trigger: CTGTGATGAGAAGGTGTCTGTGGATGAAAACGTCATGTCCACTCACAGCACGGCCAGACTGAGTTTCGTGACTCCCCGACACCACAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp AAATTCGCCATTGGTCCCAATGTCCGCATCCGTGGCACTGACTCTTaGGATGCTGGTCCTTATGGCTGTGTTTTCCGGCAAAGAGACGCT +
Preference number: 5 (lower is better)
Translates to: KFAIGPNVRIRGTDS*DAGPYGCVFRQRDA
Trigger: AGCGTCTCTTTGCCGGAAAACACAGCCATAAGGACCAGCATCGCAAGAGTCAGTGCCACGGATGCGGACATTGGGACCAATGGCGAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp ATGGAGCCTGGTGGTGGACGACTTCTGGGGGCGCCCGTTGTCAACTaGCTTAATGGAAAGAATGTCATATTCTCCGGCCGCAGAAAACTT +
Preference number: 5 (lower is better)
Translates to: MEPGGGRLLGAPVVN*LNGKNVIFSGRRKL
Trigger: AAGTTTTCTGCGGCCGGAGAATATGACATTCTTTCCATTAAGGCAGTTGACAACGGGCGCCCCCAGAAGTCGTCCACCACCAGGCTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp GCTGTCTGCATCGCAGGCTCTCACACACATCACGAAATGCCCGTGTaGGGCGTGCTCGCTGATTCTGGCTTCATAAACCTGTTGTTCAAA +
Preference number: 5 (lower is better)
Translates to: AVCIAGSHTHHEMPV*GVLADSGFINLLFK
Trigger: TTTGAACAACAGGTTTATGAAGCCAGAATCAGCGAGCACGCCGCACACGGGCATTTCGTGATGTGTGTGAGAGCCTGCGATGCAGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp ATGAGAAAACCGATTCCTCAAACGAAATCGGCTCCGAGGACGGCTTaGGTTTGGAGATCCACTCGATATGGAGCCTGGTGGTGGACGACT +
Preference number: 5 (lower is better)
Translates to: MRKPIPQTKSAPRTA*VWRSTRYGAWWWTT
Trigger: AGTCGTCCACCACCAGGCTCCATATCGAGTGGATCTCCAAACCCAAGCCGTCCTCGGAGCCGATTTCGTTTGAGGAATCGGTTTTCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp GAGAACTTCTCCCCAATGTTGCCTTCAGTGATGGAGTACATGACCTaGGAGAATGCCTTGGAGTCAGCGTCTGTGGCGTTCACCGTGATG +
Preference number: 5 (lower is better)
Translates to: ENFSPMLPSVMEYMT*ENALESASVAFTVM
Trigger: CATCACGGTGAACGCCACAGACGCTGACTCCAAGGCATTCTCCCAGGTCATGTACTCCATCACTGAAGGCAACATTGGGGAGAAGTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp GGTGGACAACACGCCCGACGTGTGGCTGATTTTAAATCTGCGGTCTaGGTTGAGGATGCGGTAAAACAAAGGCTCATTGAGTGGGTTCCC +
Preference number: 5 (lower is better)
Translates to: GGQHARRVADFKSAV*VEDAVKQRLIEWVP
Trigger: GGGAACCCACTCAATGAGCCTTTGTTTTACCGCATCCTCAACCCAGACCGCAGATTTAAAATCAGCCACACGTCGGGCGTGTTGTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp TGTTCACGGTCGCCACATCACTCAACGAAGGCGTGCCTCCATCAGTaGCTTCCACGGTCAGGTAATACTCGTGGGAGCTTTCATAATCCA +
Preference number: 5 (lower is better)
Translates to: CSRSPHHSTKACLHQ*LPRSGNTRGSFHNP
Trigger: TGGATTATGAAAGCTCCCACGAGTATTACCTGACCGTGGAAGCCACTGATGGAGGCACGCCTTCGTTGAGTGATGTGGCGACCGTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS-3UTR CAA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACGGGCGGAGGCTCTTTaGTCACTTGTTGTCACCTCG +
Preference number: 5 (lower is better)
Translates to: NTTADVTDSISRFMKVQARAEAL*SLVVTS
Trigger: CGAGGTGACAACAAGTGACAAAAGAGCCTCCGCCCG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGGGTTCCTCTGTGGCTaGGTCCCTGGCCTCGATCTT +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHGFLCG*VPGLDL
Trigger: AAGATCGAGGCCAGGGACCAAGCCACAGAGGAACCC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGTGAAAACGGGCGGGTaGTCGTTCTCATCCCGCACG +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHVKTGG*SFSSRT
Trigger: CGTGCGGGATGAGAACGACAACCCGCCCGTTTTCAC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACCTCGATATCCCGACTaGCGGCGTACACCTGGAGAA +
Preference number: 5 (lower is better)
Translates to: NTTADVTDSISRFMKVQAPRYPD*RRTPGE
Trigger: TTCTCCAGGTGTACGCCGCAAGTCGGGATATCGAGG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS TCA 90 bp CACAGAGGCATGCCAGGGGGCTCAACTGAGATCACGCCGATCATGTaGGCCACCGGATCACTTTCCATTACGGTAAATGAGAAAACCGAT +
Preference number: 5 (lower is better)
Translates to: HRGMPGGSTEITPIM*ATGSLSITVNEKTD
Trigger: ATCGGTTTTCTCATTTACCGTAATGGAAAGTGATCCGGTGGCTCACATGATCGGCGTGATCTCAGTTGAGCCCCCTGGCATGCCTCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp ACTCGGCGAACAGACGAGGAGTCCCCATGTCGTGCACTTGGACGGTaGAGTGAAAAGCATGTGTTTCTTCATAGTCCAGACTCAGCACTG +
Preference number: 5 (lower is better)
Translates to: TRRTDEESPCRALGR*SEKHVFLHSPDSAL
Trigger: CAGTGCTGAGTCTGGACTATGAAGAAACACATGCTTTTCACTTCACCGTCCAAGTGCACGACATGGGGACTCCTCGTCTGTTCGCCGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp GGAGCATTATCGTTCACATCTTCTAACGTGAGCACAATAGCCGCCTaGCAGGACCTCCCACCTCCGTCCGTGGCCTTGACTAGAAGATTA +
Preference number: 5 (lower is better)
Translates to: GALSFTSSNVSTIAA*QDLPPPSVALTRRL
Trigger: TAATCTTCTAGTCAAGGCCACGGACGGAGGTGGGAGGTCCTGTCAGGCGGCTATTGTGCTCACGTTAGAAGATGTGAACGATAATGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp AGGATGGCTGTCCCAGTCGACGGCCCCGACGGCTTTCACTTTGAATaGTTTACTCCCTGGGAAAGACCTCACTGTTTTAAACTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: RMAVPVDGPDGFHFE*FTPWERPHCFKLLK
Trigger: CTTCAGCAGTTTAAAACAGTGAGGTCTTTCCCAGGGAGTAAAGCATTCAAAGTGAAAGCCGTCGGGGCCGTCGACTGGGACAGCCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp GGAACACCGTTGTCTGTCACAGTAACTTCTAGAATGTGCTCGTCCTaGTGTTCTCGGTCCAGCTTCCTCGACGTGGTTGTGATGAGACCT +
Preference number: 5 (lower is better)
Translates to: GTPLSVTVTSRMCSS*CSRSSFLDVVVMRP
Trigger: AGGTCTCATCACAACCACGTCGAGGAAGCTGGACCGAGAACAGCAGGACGAGCACATTCTAGAAGTTACTGTGACAGACAACGGTGTTCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp AATGGCTTCATGGTCAAGCTTTTCAGCAGTGTAAAGAGCGCCTGTTaGGGGATCGAGGCGGAATTTCTTGAGGCTGGCTGGATCGATGCT +
Preference number: 5 (lower is better)
Translates to: NGFMVKLFSSVKSAC*GIEAEFLEAGWIDA
Trigger: AGCATCGATCCAGCCAGCCTCAAGAAATTCCGCCTCGATCCCGCAACAGGCGCTCTTTACACTGCTGAAAAGCTTGACCATGAAGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp GTCACATGCCCGCTGGGGCCCAGATCTTTATCAGTGGCTTCGACCTaGATGATTTCACTGTTCACCTCCTTGTCTTCACTCACTTCCACA +
Preference number: 5 (lower is better)
Translates to: VTCPLGPRSLSVAST*MISLFTSLSSLTST
Trigger: TGTGGAAGTGAGTGAAGACAAGGAGGTGAACAGTGAAATCATCCAGGTCGAAGCCACTGATAAAGATCTGGGCCCCAGCGGGCATGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp GGTTTGGAGATCCACTCGATATGGAGCCTGGTGGTGGACGACTTCTaGGGGCGCCCGTTGTCAACTGCCTTAATGGAAAGAATGTCATAT +
Preference number: 5 (lower is better)
Translates to: GLEIHSIWSLVVDDF*GRPLSTALMERMSY
Trigger: ATATGACATTCTTTCCATTAAGGCAGTTGACAACGGGCGCCCCCAGAAGTCGTCCACCACCAGGCTCCATATCGAGTGGATCTCCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp GAACACTTTCAGCCCTTCTGGGCTGTTGGCTTGGATATGGACCACTaGGCTGTGCATCTGGATGTTCTCTGGGATCTCAGCGCTATAGAA +
Preference number: 5 (lower is better)
Translates to: EHFQPFWAVGLDMDH*AVHLDVLWDLSAIE
Trigger: TTCTATAGCGCTGAGATCCCAGAGAACATCCAGATGCACAGCCCAGTGGTCCATATCCAAGCCAACAGCCCAGAAGGGCTGAAAGTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp AAAAGGGTCTCCGTCCGTGATACTGTAGAACACTTTCAGCCCTTCTaGGCTGTTGGCTTGGATATGGACCACTGGGCTGTGCATCTGGAT +
Preference number: 5 (lower is better)
Translates to: KRVSVRDTVEHFQPF*AVGLDMDHWAVHLD
Trigger: ATCCAGATGCACAGCCCAGTGGTCCATATCCAAGCCAACAGCCCAGAAGGGCTGAAAGTGTTCTACAGTATCACGGACGGAGACCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp CCAAAGGCGGTGATGAAAATCTCCAGCGGCAAGATGGCAGGAGGGTaGATGCTTTCCTCGATCACCCTGATGTCAATGTGTGTCATGGAT +
Preference number: 5 (lower is better)
Translates to: PKAVMKISSGKMAGG*MLSSITLMSMCVMD
Trigger: ATCCATGACACACATTGACATCAGGGTGATCGAGGAAAGCATCCACCCTCCTGCCATCTTGCCGCTGGAGATTTTCATCACCGCCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp TGTATTACAGTCACTATGGAAGCATTGTCATCACAGGACTCTGACTaGAAGGAGCTAAGCGACTGCACCTCAGACAGGCTCTCCCGGGCA +
Preference number: 5 (lower is better)
Translates to: CITVTMEALSSQDSD*KELSDCTSDRLSRA
Trigger: TGCCCGGGAGAGCCTGTCTGAGGTGCAGTCGCTTAGCTCCTTCCAGTCAGAGTCCTGTGATGACAATGCTTCCATAGTGACTGTAATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215588.2
CDS-3UTR CAA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAGATGTCTGTGGCGCGTaGTCATTGACATCCTCCACC +
Preference number: 5 (lower is better)
Translates to: NTTADVTDSISRFMKVQADVCGA*SLTSST
Trigger: GGTGGAGGATGTCAATGACAACGCGCCACAGACATC...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACACCACCACCGTTGTGTaGGTGGACAAACCGGCCATG +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHTTTVV*VDKPAM
Trigger: CATGGCCGGTTTGTCCACCAACACAACGGTGGTGGT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAAGCCCTTCTGGGCTGTaGGCTTGGATATGGACCACT +
Preference number: 5 (lower is better)
Translates to: NTTADVTDSISRFMKVQASPSGL*AWIWTT
Trigger: AGTGGTCCATATCCAAGCCAACAGCCCAGAAGGGCT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCCTCGATATCCCGACTaGCGGCGTACACCTGGAGAA +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHPRYPD*RRTPGE
Trigger: TTCTCCAGGTGTACGCCGCAAGTCGGGATATCGAGG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTTGACTCTGGGTGGATaGCCGTTGTCGGCAGCTTGC +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHLTLGG*PLSAAC
Trigger: GCAAGCTGCCGACAACGGCAATCCACCCAGAGTCAA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATTCACCGTGGTTGTGTaGACTCTGGGTGGATTGCCG +
Preference number: 5 (lower is better)
Translates to: NTTADVTDSISRFMKVQAFTVVV*TLGGLP
Trigger: CGGCAATCCACCCAGAGTCAACACAACCACGGTGAA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACTCCTGGGTCACTTGTaGGATGTGCACGGTGATGTC +
Preference number: 5 (lower is better)
Translates to: NTTADVTDSISRFMKVQALLGHL*DVHGDV
Trigger: GACATCACCGTGCACATCCAACAAGTGACCCAGGAG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAGTTGGCCCCAAACGTTaGTCTTCAGGTTCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: NTTADVTDSISRFMKVQAVGPKR*SSGSAW
Trigger: CCAGGCTGAACCTGAAGACAAACGTTTGGGGCCAAC...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS TCA 90 bp TGTAGTAAAATTCGCCATTGGTCCCAATGTCCGCATCCGTGGCACTaGCTCTTGCGATGCTGGTCCTTATGGCTGTGTTTTCCGGCAAAG +
Preference number: 5 (lower is better)
Translates to: CSKIRHWSQCPHPWH*LLRCWSLWLCFPAK
Trigger: CTTTGCCGGAAAACACAGCCATAAGGACCAGCATCGCAAGAGTCAGTGCCACGGATGCGGACATTGGGACCAATGGCGAATTTTACTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp TTGAATGCTTTACTCCCTGGGAAAGACCTCACTGTTTTAAACTGCTaGAGGAGGTCGCCAGCCACGATGCTCAAAGACGCTATCTCCCCG +
Preference number: 5 (lower is better)
Translates to: LNALLPGKDLTVLNC*RRSPATMLKDAISP
Trigger: CGGGGAGATAGCGTCTTTGAGCATCGTGGCTGGCGACCTCCTTCAGCAGTTTAAAACAGTGAGGTCTTTCCCAGGGAGTAAAGCATTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp GGCGTGGCAAAATTTTCTCCGTCTGTCGCTGTGATTCTCAAACTGTaGAAGGAAACCTTTGCGCCCAAGCCATCCGTGAGGGAGTGCTTT +
Preference number: 5 (lower is better)
Translates to: GVAKFSPSVAVILKL*KETFAPKPSVRECF
Trigger: AAAGCACTCCCTCACGGATGGCTTGGGCGCAAAGGTTTCCTTTCACAGTTTGAGAATCACAGCGACAGACGGAGAAAATTTTGCCACGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp CACGCCGATCATGTGAGCCACCGGATCACTTTCCATTACGGTAAATaGGAAAACCGATTCCTCAAACGAAATCGGCTCCGAGGACGGCTT +
Preference number: 5 (lower is better)
Translates to: HADHVSHRITFHYGK*ENRFLKRNRLRGRL
Trigger: AAGCCGTCCTCGGAGCCGATTTCGTTTGAGGAATCGGTTTTCTCATTTACCGTAATGGAAAGTGATCCGGTGGCTCACATGATCGGCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp AGGCTCTCACACACATCACGAAATGCCCGTGTGCGGCGTGCTCGCTaGTTCTGGCTTCATAAACCTGTTGTTCAAACAGAGGTGGGTTAT +
Preference number: 5 (lower is better)
Translates to: RLSHTSRNARVRRAR*FWLHKPVVQTEVGY
Trigger: ATAACCCACCTCTGTTTGAACAACAGGTTTATGAAGCCAGAATCAGCGAGCACGCCGCACACGGGCATTTCGTGATGTGTGTGAGAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp ACTTCCCTGGTTCCCCTCTATAATGGAGTAGTGGATGTGGCTGTTTaGGGGGCCATCAGCATCGTCAGCCATAATCGTAATGACAGGCTG +
Preference number: 5 (lower is better)
Translates to: TSLVPLYNGVVDVAV*GAISIVSHNRNDRL
Trigger: CAGCCTGTCATTACGATTATGGCTGACGATGCTGATGGCCCCTCAAACAGCCACATCCACTACTCCATTATAGAGGGGAACCAGGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp GTGGATGCTTTCCTCGATCACCCTGATGTCAATGTGTGTCATGGATaGCAGCTGAGGCTTTCCGCTGTCAGCCACCTTAACATGCAGAAG +
Preference number: 5 (lower is better)
Translates to: VDAFLDHPDVNVCHG*QLRLSAVSHLNMQK
Trigger: CTTCTGCATGTTAAGGTGGCTGACAGCGGAAAGCCTCAGCTGTCATCCATGACACACATTGACATCAGGGTGATCGAGGAAAGCATCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp TACTTTGATGAGGACCTGGGTGAGGATCGTGGTGGTCCCATCTGTTaGCTCCACGGTGAGGTTATAGCTGGATTTCTGTTCTGCATCAAG +
Preference number: 5 (lower is better)
Translates to: YFDEDLGEDRGGPIC*LHGEVIAGFLFCIK
Trigger: CTTGATGCAGAACAGAAATCCAGCTATAACCTCACCGTGGAGGCAACAGATGGGACCACCACGATCCTCACCCAGGTCCTCATCAAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp GCTCATAGCGGCTTCGTAGCTGAGTCGTGTTCTGTATTGCGATGGTaGCAGTCTTGTGGTCCATTGAGAACTTCTCCCCAATGTTGCCTT +
Preference number: 5 (lower is better)
Translates to: AHSGFVAESCSVLRW*QSCGPLRTSPQCCL
Trigger: AAGGCAACATTGGGGAGAAGTTCTCAATGGACCACAAGACTGGCACCATCGCAATACAGAACACGACTCAGCTACGAAGCCGCTATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp TACTGGAAGTGTGTAAACTGGATAGGAGGGGTGGGTTCAAGTCTTTaGCTGCCATCACTGTCTCCAAACTGCTGGAGGAAGAGGAGCAGA +
Preference number: 5 (lower is better)
Translates to: YWKCVNWIGGVGSSL*LPSLSPNCWRKRSR
Trigger: TCTGCTCCTCTTCCTCCAGCAGTTTGGAGACAGTGATGGCAGCCAAAGACTTGAACCCACCCCTCCTATCCAGTTTACACACTTCCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp GCCGAGTTCTCGTGCACAGTGACATTGTACTGGAAGTGTGTAAACTaGATAGGAGGGGTGGGTTCAAGTCTTTGGCTGCCATCACTGTCT +
Preference number: 5 (lower is better)
Translates to: AEFSCTVTLYWKCVN*IGGVGSSLWLPSLS
Trigger: AGACAGTGATGGCAGCCAAAGACTTGAACCCACCCCTCCTATCCAGTTTACACACTTCCAGTACAATGTCACTGTGCACGAGAACTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp GCACGTGCACCACCACCGTTGTGTTGGTGGACAAACCGGCCATGTTaGTCCCTTGCACTGTCAATGAATACATGGGCAGTGTTTCAAAAT +
Preference number: 5 (lower is better)
Translates to: ARAPPPLCWWTNRPC*SLALSMNTWAVFQN
Trigger: ATTTTGAAACACTGCCCATGTATTCATTGACAGTGCAAGGGACCAACATGGCCGGTTTGTCCACCAACACAACGGTGGTGGTGCACGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp TCAGCTCATAGCGGCTTCGTAGCTGAGTCGTGTTCTGTATTGCGATaGTGCCAGTCTTGTGGTCCATTGAGAACTTCTCCCCAATGTTGC +
Preference number: 5 (lower is better)
Translates to: SAHSGFVAESCSVLR*CQSCGPLRTSPQCC
Trigger: GCAACATTGGGGAGAAGTTCTCAATGGACCACAAGACTGGCACCATCGCAATACAGAACACGACTCAGCTACGAAGCCGCTATGAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGATGTCTGTGGCGCGTaGTCATTGACATCCTCCACC +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHDVCGA*SLTSST
Trigger: GGTGGAGGATGTCAATGACAACGCGCCACAGACATC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAACGACCGACGTCCCTTaGGCAGCGCTGGACCCGATG +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSETTDVP*AALDPM
Trigger: CATCGGGTCCAGCGCTGCCAAAGGGACGTCGGTCGT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACAGTGGATGTGGCTGTTaGAGGGGCCATCAGCATCGT +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHSGCGC*RGHQHR
Trigger: ACGATGCTGATGGCCCCTCAAACAGCCACATCCACT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTTCACCGTGGTTGTGTaGACTCTGGGTGGATTGCCG +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHFTVVV*TLGGLP
Trigger: CGGCAATCCACCCAGAGTCAACACAACCACGGTGAA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTCCTTCACTTTCCTCTaGATCGTCGCCGCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHSFTFL*IVAAVR
Trigger: CCTGACAGCGGCGACGATCAAGAGGAAAGTGAAGGA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGTTGGCCCCAAACGTTaGTCTTCAGGTTCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHVGPKR*SSGSAW
Trigger: CCAGGCTGAACCTGAAGACAAACGTTTGGGGCCAAC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGCTGTCTGAGGGCGAGTaGGAAGGCGGCGGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRLSEGE*EGGGGG
Trigger: GCCTCCACCGCCGCCTTCCAACTCGCCCTCAGACAG...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS TCA 90 bp CATGCCCGCTGGGGCCCAGATCTTTATCAGTGGCTTCGACCTGGATaGTTTCACTGTTCACCTCCTTGTCTTCACTCACTTCCACAAAAT +
Preference number: 5 (lower is better)
Translates to: HARWGPDLYQWLRPG*FHCSPPCLHSLPQN
Trigger: ATTTTGTGGAAGTGAGTGAAGACAAGGAGGTGAACAGTGAAATCATCCAGGTCGAAGCCACTGATAAAGATCTGGGCCCCAGCGGGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp CCAAACGTTTGTCTTCAGGTTCAGCCTGGCGCTTCTTCTTCCGACTaGTCATCTTCCGGCAGAGGACGAACACCATCACTAGTAAGACTA +
Preference number: 5 (lower is better)
Translates to: PNVCLQVQPGASSSD*SSSGRGRTPSLVRL
Trigger: TAGTCTTACTAGTGATGGTGTTCGTCCTCTGCCGGAAGATGATCAGTCGGAAGAAGAAGCGCCAGGCTGAACCTGAAGACAAACGTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp GATGTAGATGCCCATCTTTCTGGGGTGGCCAACATAGGTCTTCGCTaGCGAGTTCTCGTGCACAGTGACATTGTACTGGAAGTGTGTAAA +
Preference number: 5 (lower is better)
Translates to: DVDAHLSGVANIGLR*RVLVHSDIVLEVCK
Trigger: TTTACACACTTCCAGTACAATGTCACTGTGCACGAGAACTCGGCAGCGAAGACCTATGTTGGCCACCCCAGAAAGATGGGCATCTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp ACCACCACCGTTGTGTTGGTGGACAAACCGGCCATGTTGGTCCCTTaGACTGTCAATGAATACATGGGCAGTGTTTCAAAATCCAAGGCT +
Preference number: 5 (lower is better)
Translates to: TTTVVLVDKPAMLVP*TVNEYMGSVSKSKA
Trigger: AGCCTTGGATTTTGAAACACTGCCCATGTATTCATTGACAGTGCAAGGGACCAACATGGCCGGTTTGTCCACCAACACAACGGTGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp TGGTCCTTATGGCTGTGTTTTCCGGCAAAGAGACGCTGTAGGAGGTaGGGGAGAATAAGGGCCTTAAGTCGTTTGTATCCAGCACTTGTA +
Preference number: 5 (lower is better)
Translates to: WSLWLCFPAKRRCRR*GRIRALSRLYPALV
Trigger: TACAAGTGCTGGATACAAACGACTTAAGGCCCTTATTCTCCCCCACCTCCTACAGCGTCTCTTTGCCGGAAAACACAGCCATAAGGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCCGACGGCTTTCACTTaGAATGCTTTACTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHPTAFT*NALLPG
Trigger: CCCAGGGAGTAAAGCATTCAAAGTGAAAGCCGTCGG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTGGGGAGGAGTCCCTTaGTCTTTAGCCTGCAATGTC +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHWGGVP*SLACNV
Trigger: GACATTGCAGGCTAAAGACAAAGGGACTCCTCCCCA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGGCTTCCCTTTGTCTTaGGCCCTCACGGTGAGATTA +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHGFPLS*ALTVRL
Trigger: TAATCTCACCGTGAGGGCCAAAGACAAAGGGAAGCC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTGTGGCGCGTTGTCATaGACATCCTCCACCTCTATG +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHCGALS*TSSTSM
Trigger: CATAGAGGTGGAGGATGTCAATGACAACGCGCCACA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGGCTCCGAGGACGGCTaGGGTTTGGAGATCCACTCG +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEGSEDG*GLEIHS
Trigger: CGAGTGGATCTCCAAACCCAAGCCGTCCTCGGAGCC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTCAGCGTTCCTCCCTTaGTCTTTGTCCAGAGCTGTC +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHSAFLP*SLSRAV
Trigger: GACAGCTCTGGACAAAGACAAAGGGAGGAACGCTGA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATCCGCAGAGTACTCTTaGGATGTGAACTTGGGAGAG +
Preference number: 5 (lower is better)
Translates to: NTTADVTDSISRFMKVQASAEYS*DVNLGE
Trigger: CTCTCCCAAGTTCACATCCAAAGAGTACTCTGCGGA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACTGCTCTCCTTTACGTaGATTTTCACGGAGGCCATG +
Preference number: 5 (lower is better)
Translates to: NTTADVTDSISRFMKVQALLSFT*IFTEAM
Trigger: CATGGCCTCCGTGAAAATCAACGTAAAGGAGAGCAG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAAACACGGGCATGGCTTaGTTCATGACAGTGATGGGA +
Preference number: 5 (lower is better)
Translates to: NTTADVTDSISRFMKVQANTGMA*FMTVMG
Trigger: TCCCATCACTGTCATGAACAAAGCCATGCCCGTGTT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAACGACCGACGTCCCTTaGGCAGCGCTGGACCCGATG +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKTTDVP*AALDPM
Trigger: CATCGGGTCCAGCGCTGCCAAAGGGACGTCGGTCGT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAAGGGGAGCGTTGTCATaGACATCGGAGACATCGATA +
Preference number: 5 (lower is better)
Translates to: NTTADVTDSISRFMKVQARGALS*TSETSI
Trigger: TATCGATGTCTCCGATGTCAATGACAACGCTCCCCT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACGGACGCCCAGGATGTaGCGTAGGGCTCGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKRTPRM*RRARWK
Trigger: CTTCCAGCGAGCCCTACGCAACATCCTGGGCGTCCG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATATGCAGAAGTTGCTTaGTTGAAACGTGGGTGCCGC +
Preference number: 5 (lower is better)
Translates to: NTTADVTDSISRFMKVQAYAEVA*LKRGCR
Trigger: GCGGCACCCACGTTTCAACAAAGCAACTTCTGCATA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACCCATGCTTTGTCCCTaGCTGGCGGAGGTGGCCACC +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKPMLCP*LAEVAT
Trigger: GGTGGCCACCTCCGCCAGCAAGGGACAAAGCATGGG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACGCCTCGCCCATGCTTaGTCCCTTGCTGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKRLAHA*SLAGGG
Trigger: ACCTCCGCCAGCAAGGGACAAAGCATGGGCGAGGCG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAGTAATTGGGGAACTCTaGTATGTCTGGCAGAGGGAC +
Preference number: 5 (lower is better)
Translates to: NTTADVTDSISRFMKVQAVIGEL*YVWQRD
Trigger: GTCCCTCTGCCAGACATACAAGAGTTCCCCAATTAC...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS TCA 90 bp GACCGTGAGCCAGTAGTGGGAAGTCGACTCTCTATCCAGTCGGTCTaGAGTCTCTATAACACCTGTTTCTTCATCTATCCTGAAGACACC +
Preference number: 5 (lower is better)
Translates to: DREPVVGSRLSIQSV*SLYNTCFFIYPEDT
Trigger: GGTGTCTTCAGGATAGATGAAGAAACAGGTGTTATAGAGACTTCAGACCGACTGGATAGAGAGTCGACTTCCCACTACTGGCTCACGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp CTGAGTCGTGTTCTGTATTGCGATGGTGCCAGTCTTGTGGTCCATTaGGAACTTCTCCCCAATGTTGCCTTCAGTGATGGAGTACATGAC +
Preference number: 5 (lower is better)
Translates to: LSRVLYCDGASLVVH*ELLPNVAFSDGVHD
Trigger: GTCATGTACTCCATCACTGAAGGCAACATTGGGGAGAAGTTCTCAATGGACCACAAGACTGGCACCATCGCAATACAGAACACGACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp TTCACTTTCCTCTTGATCGTCGCCGCTGTCAGGAGGACCCCATGCTaGTTCACCTCAAAGGCGTTTTCATCATTTCCACTCACAATAGTG +
Preference number: 5 (lower is better)
Translates to: FTFLLIVAAVRRTPC*FTSKAFSSFPLTIV
Trigger: CACTATTGTGAGTGGAAATGATGAAAACGCCTTTGAGGTGAATCAGCATGGGGTCCTCCTGACAGCGGCGACGATCAAGAGGAAAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp GGAATCTGTGGCTCGAACTTGAAGGACAGGTGTTCCAATTACAGATaGTTCAGACAGGGTTGTGGAGTAAGATGGCTGCACAAACACAGG +
Preference number: 5 (lower is better)
Translates to: GICGSNLKDRCSNYR*FRQGCGVRWLHKHR
Trigger: CCTGTGTTTGTGCAGCCATCTTACTCCACAACCCTGTCTGAAGCATCTGTAATTGGAACACCTGTCCTTCAAGTTCGAGCCACAGATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp ATGGGAATAACTAGGAATGGCTTTGACCAGGACCACGGGTGTATGTaGAGGGGCAAACTCACTGATCTCGGCTCTGTAAACATCCATTTC +
Preference number: 5 (lower is better)
Translates to: MGITRNGFDQDHGCM*RGKLTDLGSVNIHF
Trigger: GAAATGGATGTTTACAGAGCCGAGATCAGTGAGTTTGCCCCTCCACATACACCCGTGGTCCTGGTCAAAGCCATTCCTAGTTATTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp AGCATCCACCTTCACCACAGCGTAGTAGGGAAGGTTAACAAACACTaGAGCATTATCATTCTGGTCTTCGACGGTGACTTTCACCACGAC +
Preference number: 5 (lower is better)
Translates to: SIHLHHSVVGKVNKH*SIIILVFDGDFHHD
Trigger: GTCGTGGTGAAAGTCACCGTCGAAGACCAGAATGATAATGCTCCAGTGTTTGTTAACCTTCCCTACTACGCTGTGGTGAAGGTGGATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp TTTGTTCATGACAGTGATGGGAACCAGAACTTCTGCAGAGAAAGCTaGACTCCCTCCGTCCTTGGCGACCACTGTGACAAGGTATTCTTT +
Preference number: 5 (lower is better)
Translates to: FVHDSDGNQNFCRES*TPSVLGDHCDKVFF
Trigger: AAAGAATACCTTGTCACAGTGGTCGCCAAGGACGGAGGGAGTCCAGCTTTCTCTGCAGAAGTTCTGGTTCCCATCACTGTCATGAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp TCCATGTTAATGGCAAAAGATTCGATGATGTCTGCGTCTTGGGATTaGTCTAGGCTGTACATGACTTGGCCGTTGGCTCCTGAGTCTAGG +
Preference number: 5 (lower is better)
Translates to: SMLMAKDSMMSASWD*SRLYMTWPLAPESR
Trigger: CCTAGACTCAGGAGCCAACGGCCAAGTCATGTACAGCCTAGACCAATCCCAAGACGCAGACATCATCGAATCTTTTGCCATTAACATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp TTCAATGTCATAACCCCCAGGGTAATAGTCAGTATCGATGGCGTTTaGATCAGCCGAGTAGAGGGGTGTGTGTTCGTCAATAGCCTCGTA +
Preference number: 5 (lower is better)
Translates to: FNVITPRVIVSIDGV*ISRVEGCVFVNSLV
Trigger: TACGAGGCTATTGACGAACACACACCCCTCTACTCGGCTGATCCAAACGCCATCGATACTGACTATTACCCTGGGGGTTATGACATTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACAGGGCCTTAAGTCGTTaGTATCCAGCACTTGTACCC +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHRALSR*YPALVP
Trigger: GGGTACAAGTGCTGGATACAAACGACTTAAGGCCCT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATGCAAGTTGACCGGCTaGCGACTGGCAGCCACCGTT +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSECKLTG*RLAATV
Trigger: AACGGTGGCTGCCAGTCGCAAGCCGGTCAACTTGCA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGGGTTCCTCTGTGGCTaGGTCCCTGGCCTCGATCTT +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEGFLCG*VPGLDL
Trigger: AAGATCGAGGCCAGGGACCAAGCCACAGAGGAACCC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGACACGGGCTTCCCTTaGTCTTTGGCCCTCACGGTG +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEDTGFP*SLALTV
Trigger: CACCGTGAGGGCCAAAGACAAAGGGAAGCCCGTGTC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTTCCTCCCTTTGTCTTaGTCCAGAGCTGTCACTTGC +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHFLPLS*SRAVTC
Trigger: GCAAGTGACAGCTCTGGACAAAGACAAAGGGAGGAA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTCCGCAGAGTACTCTTaGGATGTGAACTTGGGAGAG +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHSAEYS*DVNLGE
Trigger: CTCTCCCAAGTTCACATCCAAAGAGTACTCTGCGGA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAAACTTCTCCCCAATGTaGCCTTCAGTGATGGAGTAC +
Preference number: 5 (lower is better)
Translates to: NTTADVTDSISRFMKVQANFSPM*PSVMEY
Trigger: GTACTCCATCACTGAAGGCAACATTGGGGAGAAGTT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCACAGTCTTGTGGTCCATaGAGAACTTCTCCCCAATGT +
Preference number: 5 (lower is better)
Translates to: NTTADVTDSISRFMKVQAQSCGP*RTSPQC
Trigger: ACATTGGGGAGAAGTTCTCAATGGACCACAAGACTG...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCTGCTCTCCTTTACGTaGATTTTCACGGAGGCCATG +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHLLSFT*IFTEAM
Trigger: CATGGCCTCCGTGAAAATCAACGTAAAGGAGAGCAG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTCGTGGTCAAGCTCCTaGAGAGTTGTAATCCAGCCT +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHSWSSS*RVVIQP
Trigger: AGGCTGGATTACAACTCTCAAGGAGCTTGACCACGA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAACTGGACTGTTGTCGTaGGCATCGAGAACTTTGACT +
Preference number: 5 (lower is better)
Translates to: NTTADVTDSISRFMKVQATGLLS*ASRTLT
Trigger: AGTCAAAGTTCTCGATGCCAACGACAACAGTCCAGT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATCTCCTTGGCAATCCTaGGTCCACTGCTTTCAAAGT +
Preference number: 5 (lower is better)
Translates to: NTTADVTDSISRFMKVQASPWQS*VHCFQS
Trigger: ACTTTGAAAGCAGTGGACCAAGGATTGCCAAGGAGA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACAGGGGAGCGTTGTCATaGACATCGGAGACATCGATA +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHRGALS*TSETSI
Trigger: TATCGATGTCTCCGATGTCAATGACAACGCTCCCCT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GGAGCAGCCAAAGATTCTTCTTTATTCACCGTGTCAACGACAGCGTTGACAAGGGAGCCTTCGAAGGAATaGCGGTCAAGGTTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: GAAKDSSLFTVSTTALTREPSKE*RSRLFL
Trigger: GAGAAACAACCTTGACCGCAATTCCTTCGAAGGCTC...CCTTGTCAACGCTGTCGTTGACACGGTGAATAAAGAAGAATCTTTGGCTGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186342.3
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGAGCCTTCGAAGGAATaGCGGTCAAGGTTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHEPSKE*RSRLFL
Trigger: GAGAAACAACCTTGACCGCAATTCCTTCGAAGGCTC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS TCA 90 bp TGTGTTGGTGGACAAACCGGCCATGTTGGTCCCTTGCACTGTCAATaGATACATGGGCAGTGTTTCAAAATCCAAGGCTCTCTGAGTGAT +
Preference number: 5 (lower is better)
Translates to: CVGGQTGHVGPLHCQ*IHGQCFKIQGSLSD
Trigger: ATCACTCAGAGAGCCTTGGATTTTGAAACACTGCCCATGTATTCATTGACAGTGCAAGGGACCAACATGGCCGGTTTGTCCACCAACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp GAAATTCCTCTGTTTGGTTCCGAGTCGGAATCTGTGGCTCGAACTTaGAGGACAGGTGTTCCAATTACAGATGCTTCAGACAGGGTTGTG +
Preference number: 5 (lower is better)
Translates to: EIPLFGSESESVART*RTGVPITDASDRVV
Trigger: CACAACCCTGTCTGAAGCATCTGTAATTGGAACACCTGTCCTTCAAGTTCGAGCCACAGATTCCGACTCGGAACCAAACAGAGGAATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp AGCACACTCATCGATGTCACTCTGACATCTTTCTCCCCTAAAGCCTaGGTCACACTGACAGACAGCACCATCCAAACTGTCAAAACACGT +
Preference number: 5 (lower is better)
Translates to: STLIDVTLTSFSPKA*VTLTDSTIQTVKTR
Trigger: ACGTGTTTTGACAGTTTGGATGGTGCTGTCTGTCAGTGTGACTCAGGCTTTAGGGGAGAAAGATGTCAGAGTGACATCGATGAGTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 90 bp GCCCTCACGGTGAGATTATACAGTTGCTTCTTCTCAAAGTCCAGCTaGTGGACAATTCTAACTGCGCCGCTGAGTTTATCCACATCAAAG +
Preference number: 5 (lower is better)
Translates to: ALTVRLYSCFFSKSS*WTILTAPLSLSTSK
Trigger: CTTTGATGTGGATAAACTCAGCGGCGCAGTTAGAATTGTCCAGCAGCTGGACTTTGAGAAGAAGCAACTGTATAATCTCACCGTGAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp GCGTCGCCCATGTTTCCGTCTCTTATTTCATACATCACTGATGACTaGCTGTGTGCAGAGACCATCCCAACAAAACTTCCAATCCTGATG +
Preference number: 5 (lower is better)
Translates to: ASPMFPSLISYITDD*LCAETIPTKLPILM
Trigger: CATCAGGATTGGAAGTTTTGTTGGGATGGTCTCTGCACACAGCCAGTCATCAGTGATGTATGAAATAAGAGACGGAAACATGGGCGACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp TCAGCTGGTAGGAAATTCCTCTGTTTGGTTCCGAGTCGGAATCTGTaGCTCGAACTTGAAGGACAGGTGTTCCAATTACAGATGCTTCAG +
Preference number: 5 (lower is better)
Translates to: SAGRKFLCLVPSRNL*LELEGQVFQLQMLQ
Trigger: CTGAAGCATCTGTAATTGGAACACCTGTCCTTCAAGTTCGAGCCACAGATTCCGACTCGGAACCAAACAGAGGAATTTCCTACCAGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS-3UTR CAA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAACATACTCTTCCGCTTaGAACAGGTTTTCGCTGTCT +
Preference number: 5 (lower is better)
Translates to: NTTADVTDSISRFMKVQATYSSA*NRFSLS
Trigger: AGACAGCGAAAACCTGTTCAAAGCGGAAGAGTATGT...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTGCAAGTTGACCGGCTaGCGACTGGCAGCCACCGTT +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRCKLTG*RLAATV
Trigger: AACGGTGGCTGCCAGTCGCAAGCCGGTCAACTTGCA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTCACTGTTCACCTCCTaGTCTTCACTCACTTCCACA +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHSLFTS*SSLTST
Trigger: TGTGGAAGTGAGTGAAGACAAGGAGGTGAACAGTGA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGGGTTCCTCTGTGGCTaGGTCCCTGGCCTCGATCTT +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKGFLCG*VPGLDL
Trigger: AAGATCGAGGCCAGGGACCAAGCCACAGAGGAACCC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGACACGGGCTTCCCTTaGTCTTTGGCCCTCACGGTG +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKDTGFP*SLALTV
Trigger: CACCGTGAGGGCCAAAGACAAAGGGAAGCCCGTGTC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCATTGGTATCTATTACTTaGATGAGGACCTGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: NTTADVTDSISRFMKVQALVSIT*MRTWVR
Trigger: CCTCACCCAGGTCCTCATCAAAGTAATAGATACCAA...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTGGGGGCGGTGGTCATaGGTATCTATTACTTTGATG +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHWGRWS*VSITLM
Trigger: CATCAAAGTAATAGATACCAATGACCACCGCCCCCA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAACCACCACCGTTGTGTaGGTGGACAAACCGGCCATG +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSETTTVV*VDKPAM
Trigger: CATGGCCGGTTTGTCCACCAACACAACGGTGGTGGT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGTGAAAACGGGCGGGTaGTCGTTCTCATCCCGCACG +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKVKTGG*SFSSRT
Trigger: CGTGCGGGATGAGAACGACAACCCGCCCGTTTTCAC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGTGAAAACGGGCGGGTaGTCGTTCTCATCCCGCACG +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRVKTGG*SFSSRT
Trigger: CGTGCGGGATGAGAACGACAACCCGCCCGTTTTCAC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp AACACAACGGCGGATGTCACCGATAGCATCTCTAGGTTCATGAAAGTCCAGGCAGGCTTCATAAACCTGTaGTTCAAACAGAGGTGGGTT +
Preference number: 5 (lower is better)
Translates to: NTTADVTDSISRFMKVQAGFINL*FKQRWV
Trigger: AACCCACCTCTGTTTGAACAACAGGTTTATGAAGCC...TGCCTGGACTTTCATGAACCTAGAGATGCTATCGGTGACATCCGCCGTTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACATCAGGCCAGTCAGCTaGTTGATTTCCAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHIRPVS*LISKFS
Trigger: GGAGAACTTGGAAATCAACAAGCTGACTGGCCTGAT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACACTTCAACTCTAGCTTaGGAAGAGAAGGTCCCGTCT +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHTSTLA*EEKVPS
Trigger: AGACGGGACCTTCTCTTCCAAAGCTAGAGTTGAAGT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACTCTCCTTGGCAATCCTaGGTCCACTGCTTTCAAAGT +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHSPWQS*VHCFQS
Trigger: ACTTTGAAAGCAGTGGACCAAGGATTGCCAAGGAGA...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATTGACTCTGGGTGGATaGCCGTTGTCGGCAGCTTGC +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSELTLGG*PLSAAC
Trigger: GCAAGCTGCCGACAACGGCAATCCACCCAGAGTCAA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS TCA 90 bp CTTCTGCAGAGAAAGCTGGACTCCCTCCGTCCTTGGCGACCACTGTaGCAAGGTATTCTTTATTTAAAGTGTCATGCTCAAACTGCTTCT +
Preference number: 5 (lower is better)
Translates to: LLQRKLDSLRPWRPL*QGILYLKCHAQTAS
Trigger: AGAAGCAGTTTGAGCATGACACTTTAAATAAAGAATACCTTGTCACAGTGGTCGCCAAGGACGGAGGGAGTCCAGCTTTCTCTGCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp CTCACGGTGAGATTATACAGTTGCTTCTTCTCAAAGTCCAGCTGCTaGACAATTCTAACTGCGCCGCTGAGTTTATCCACATCAAAGTGG +
Preference number: 5 (lower is better)
Translates to: LTVRLYSCFFSKSSC*TILTAPLSLSTSKW
Trigger: CCACTTTGATGTGGATAAACTCAGCGGCGCAGTTAGAATTGTCCAGCAGCTGGACTTTGAGAAGAAGCAACTGTATAATCTCACCGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp TCAGGAACAGCAACTTCGTATTTCGATGTAGAAAACTGGGGGCGGTaGTCATTGGTATCTATTACTTTGATGAGGACCTGGGTGAGGATC +
Preference number: 5 (lower is better)
Translates to: SGTATSYFDVENWGR*SLVSITLMRTWVRI
Trigger: GATCCTCACCCAGGTCCTCATCAAAGTAATAGATACCAATGACCACCGCCCCCAGTTTTCTACATCGAAATACGAAGTTGCTGTTCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp TCTGTGTCCTCAGGAACAGCAACTTCGTATTTCGATGTAGAAAACTaGGGGCGGTGGTCATTGGTATCTATTACTTTGATGAGGACCTGG +
Preference number: 5 (lower is better)
Translates to: SVSSGTATSYFDVEN*GRWSLVSITLMRTW
Trigger: CCAGGTCCTCATCAAAGTAATAGATACCAATGACCACCGCCCCCAGTTTTCTACATCGAAATACGAAGTTGCTGTTCCTGAGGACACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGCGGGCGGAGGCTCTTTaGTCACTTGTTGTCACCTCG +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRRAEAL*SLVVTS
Trigger: CGAGGTGACAACAAGTGACAAAAGAGCCTCCGCCCG...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGATGTCTGTGGCGCGTaGTCATTGACATCCTCCACC +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEDVCGA*SLTSST
Trigger: GGTGGAGGATGTCAATGACAACGCGCCACAGACATC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATTCTGGGGGCGCCCGTaGTCAACTGCCTTAATGGAA +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEFWGRP*STALME
Trigger: TTCCATTAAGGCAGTTGACAACGGGCGCCCCCAGAA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGACCACCACCGTTGTGTaGGTGGACAAACCGGCCATG +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRTTTVV*VDKPAM
Trigger: CATGGCCGGTTTGTCCACCAACACAACGGTGGTGGT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAAGCCCTTCTGGGCTGTaGGCTTGGATATGGACCACT +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSESPSGL*AWIWTT
Trigger: AGTGGTCCATATCCAAGCCAACAGCCCAGAAGGGCT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACCTCGATATCCCGACTaGCGGCGTACACCTGGAGAA +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKPRYPD*RRTPGE
Trigger: TTCTCCAGGTGTACGCCGCAAGTCGGGATATCGAGG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAAGTGGATGTGGCTGTTaGAGGGGCCATCAGCATCGT +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSESGCGC*RGHQHR
Trigger: ACGATGCTGATGGCCCCTCAAACAGCCACATCCACT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATCCTTCACTTTCCTCTaGATCGTCGCCGCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSESFTFL*IVAAVR
Trigger: CCTGACAGCGGCGACGATCAAGAGGAAAGTGAAGGA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACTCCTGGGTCACTTGTaGGATGTGCACGGTGATGTC +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSELLGHL*DVHGDV
Trigger: GACATCACCGTGCACATCCAACAAGTGACCCAGGAG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGTTGGCCCCAAACGTTaGTCTTCAGGTTCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEVGPKR*SSGSAW
Trigger: CCAGGCTGAACCTGAAGACAAACGTTTGGGGCCAAC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACAGTATCGATGGCGTTaGGATCAGCCGAGTAGAGGG +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEQYRWR*DQPSRG
Trigger: CCCTCTACTCGGCTGATCCAAACGCCATCGATACTG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp AGGAGCAGCCAAAGATTCTTCTTTATTCACCGTGTCAACGACAGCGTTGACAAGATCCAAATGGGAGCATaGTCATCACAGGACTCTGAC +
Preference number: 5 (lower is better)
Translates to: RSSQRFFFIHRVNDSVDKIQMGA*SSQDSD
Trigger: GTCAGAGTCCTGTGATGACAATGCTCCCATTTGGAT...CTTGTCAACGCTGTCGTTGACACGGTGAATAAAGAAGAATCTTTGGCTGCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186342.3
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTGGTACCCTCTTGGTTaGCTGAGGTCAGGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRWYPLG*LRSGAA
Trigger: GGCTGCTCCTGACCTCAGCAAACCAAGAGGGTACCA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000189017.8
CDS CCA 90 bp CACGGTAATATTCAGGGTGTATTTGTCCATTACTTCACGGTCAAGTaGAGACAGGACTTTCAGCACTCCCGTTTCCATGTCGATGGTAAA +
Preference number: 5 (lower is better)
Translates to: HGNIQGVFVHYFTVK*RQDFQHSRFHVDGK
Trigger: TTTACCATCGACATGGAAACGGGAGTGCTGAAAGTCCTGTCTCCACTTGACCGTGAAGTAATGGACAAATACACCCTGAATATTACCGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp TTTCTCATCCCTATCTACTGCACTGATCTGCAGAATCTCCACTTCTaGCTCTGTGTCCTCAGGAACAGCAACTTCGTATTTCGATGTAGA +
Preference number: 5 (lower is better)
Translates to: FLIPIYCTDLQNLHF*LCVLRNSNFVFRCR
Trigger: TCTACATCGAAATACGAAGTTGCTGTTCCTGAGGACACAGAGCCAGAAGTGGAGATTCTGCAGATCAGTGCAGTAGATAGGGATGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACCGACGGCTTTCACTTaGAATGCTTTACTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEPTAFT*NALLPG
Trigger: CCCAGGGAGTAAAGCATTCAAAGTGAAAGCCGTCGG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGGTGAGATTATACAGTaGCTTCTTCTCAAAGTCCAG +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHGEIIQ*LLLKVQ
Trigger: CTGGACTTTGAGAAGAAGCAACTGTATAATCTCACC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGGCTTCCCTTTGTCTTaGGCCCTCACGGTGAGATTA +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEGFPLS*ALTVRL
Trigger: TAATCTCACCGTGAGGGCCAAAGACAAAGGGAAGCC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATGTGGCGCGTTGTCATaGACATCCTCCACCTCTATG +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSECGALS*TSSTSM
Trigger: CATAGAGGTGGAGGATGTCAATGACAACGCGCCACA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTTCTGGGGGCGCCCGTaGTCAACTGCCTTAATGGAA +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRFWGRP*STALME
Trigger: TTCCATTAAGGCAGTTGACAACGGGCGCCCCCAGAA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATTCTGGGGGCGCCCGTaGTCAACTGCCTTAATGGAA +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKFWGRP*STALME
Trigger: TTCCATTAAGGCAGTTGACAACGGGCGCCCCCAGAA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATCAGCGTTCCTCCCTTaGTCTTTGTCCAGAGCTGTC +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSESAFLP*SLSRAV
Trigger: GACAGCTCTGGACAAAGACAAAGGGAGGAACGCTGA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACATAGGTGGATCGCCTTaGTCTGTAGCTTTTACCATT +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHIGGSP*SVAFTI
Trigger: AATGGTAAAAGCTACAGACAAAGGCGATCCACCTAT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAAGCCCTTCTGGGCTGTaGGCTTGGATATGGACCACT +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKSPSGL*AWIWTT
Trigger: AGTGGTCCATATCCAAGCCAACAGCCCAGAAGGGCT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGAGTGGATGTGGCTGTTaGAGGGGCCATCAGCATCGT +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRSGCGC*RGHQHR
Trigger: ACGATGCTGATGGCCCCTCAAACAGCCACATCCACT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTTCACCGTGGTTGTGTaGACTCTGGGTGGATTGCCG +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRFTVVV*TLGGLP
Trigger: CGGCAATCCACCCAGAGTCAACACAACCACGGTGAA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTCCTTCACTTTCCTCTaGATCGTCGCCGCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRSFTFL*IVAAVR
Trigger: CCTGACAGCGGCGACGATCAAGAGGAAAGTGAAGGA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATCCCAGTGGTACCCATaGTCATCACAGGACTCTGAC +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSESQWYP*SSQDSD
Trigger: GTCAGAGTCCTGTGATGACAATGGGTACCACTGGGA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098796.10
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACAGTATCGATGGCGTTaGGATCAGCCGAGTAGAGGG +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKQYRWR*DQPSRG
Trigger: CCCTCTACTCGGCTGATCCAAACGCCATCGATACTG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAAGGGCCTTAAGTCGTTaGTATCCAGCACTTGTACCC +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSERALSR*YPALVP
Trigger: GGGTACAAGTGCTGGATACAAACGACTTAAGGCCCT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATGGGGAGGAGTCCCTTaGTCTTTAGCCTGCAATGTC +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKWGGVP*SLACNV
Trigger: GACATTGCAGGCTAAAGACAAAGGGACTCCTCCCCA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACCTCTTTTGTCACTTGTaGTCACCTCGAGTTCAAAAT +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHLFCHL*SPRVQN
Trigger: ATTTTGAACTCGAGGTGACAACAAGTGACAAAAGAG...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACGCACGTGATTTAAGTTaGCAATACTGTAAGTCACGT +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHARDLS*QYCKSR
Trigger: ACGTGACTTACAGTATTGCAAACTTAAATCACGTGC...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATGTGGCGCGTTGTCATaGACATCCTCCACCTCTATG +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKCGALS*TSSTSM
Trigger: CATAGAGGTGGAGGATGTCAATGACAACGCGCCACA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CCTGGTTACATCAGAAAATCAGATGCTAGGCAAACGACGCTAACACCACCACACATTCTGTATGTCAGTTaGTCATTGGAGCTAGAATCC +
Preference number: 5 (lower is better)
Translates to: PGYIRKSDARQTTLTPPHILYVS*SLELES
Trigger: GGATTCTAGCTCCAATGACAAACTGACATACAGAAT...GTGTGGTGGTGTTAGCGTCGTTTGCCTAGCATCTGATTTTCTGATGTAACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTCAGCGTTCCTCCCTTaGTCTTTGTCCAGAGCTGTC +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRSAFLP*SLSRAV
Trigger: GACAGCTCTGGACAAAGACAAAGGGAGGAACGCTGA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGCGATGGTGCCAGTCTaGTGGTCCATTGAGAACTTC +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRAMVPV*WSIENF
Trigger: GAAGTTCTCAATGGACCACAAGACTGGCACCATCGC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGCGATGGTGCCAGTCTaGTGGTCCATTGAGAACTTC +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKAMVPV*WSIENF
Trigger: GAAGTTCTCAATGGACCACAAGACTGGCACCATCGC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAACTGCTCTCCTTTACGTaGATTTTCACGGAGGCCATG +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSELLSFT*IFTEAM
Trigger: CATGGCCTCCGTGAAAATCAACGTAAAGGAGAGCAG...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAAACACGGGCATGGCTTaGTTCATGACAGTGATGGGA +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSENTGMA*FMTVMG
Trigger: TCCCATCACTGTCATGAACAAAGCCATGCCCGTGTT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATCGTGGTCAAGCTCCTaGAGAGTTGTAATCCAGCCT +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSESWSSS*RVVIQP
Trigger: AGGCTGGATTACAACTCTCAAGGAGCTTGACCACGA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGAGCCTTCGAAGGAATaGCGGTCAAGGTTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEEPSKE*RSRLFL
Trigger: GAGAAACAACCTTGACCGCAATTCCTTCGAAGGCTC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTCCCAGTGGTACCCATaGTCATCACAGGACTCTGAC +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRSQWYP*SSQDSD
Trigger: GTCAGAGTCCTGTGATGACAATGGGTACCACTGGGA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098796.10
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGAGGGCCTTAAGTCGTTaGTATCCAGCACTTGTACCC +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRRALSR*YPALVP
Trigger: GGGTACAAGTGCTGGATACAAACGACTTAAGGCCCT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTGTATCTCACCTGACTaGACTGACCCACATCGGGAT +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRCISPD*TDPHRD
Trigger: ATCCCGATGTGGGTCAGTCAAGTCAGGTGAGATACA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATGTATCTCACCTGACTaGACTGACCCACATCGGGAT +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKCISPD*TDPHRD
Trigger: ATCCCGATGTGGGTCAGTCAAGTCAGGTGAGATACA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATTCCTCCCTTTGTCTTaGTCCAGAGCTGTCACTTGC +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKFLPLS*SRAVTC
Trigger: GCAAGTGACAGCTCTGGACAAAGACAAAGGGAGGAA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATCCGCAGAGTACTCTTaGGATGTGAACTTGGGAGAG +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKSAEYS*DVNLGE
Trigger: CTCTCCCAAGTTCACATCCAAAGAGTACTCTGCGGA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAAACTTCTCCCCAATGTaGCCTTCAGTGATGGAGTAC +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSENFSPM*PSVMEY
Trigger: GTACTCCATCACTGAAGGCAACATTGGGGAGAAGTT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGAACACGGGCATGGCTTaGTTCATGACAGTGATGGGA +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRNTGMA*FMTVMG
Trigger: TCCCATCACTGTCATGAACAAAGCCATGCCCGTGTT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAACTTCAACTCTAGCTTaGGAAGAGAAGGTCCCGTCT +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSETSTLA*EEKVPS
Trigger: AGACGGGACCTTCTCTTCCAAAGCTAGAGTTGAAGT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAACTGGACTGTTGTCGTaGGCATCGAGAACTTTGACT +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSETGLLS*ASRTLT
Trigger: AGTCAAAGTTCTCGATGCCAACGACAACAGTCCAGT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAAGGGGAGCGTTGTCATaGACATCGGAGACATCGATA +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKRGALS*TSETSI
Trigger: TATCGATGTCTCCGATGTCAATGACAACGCTCCCCT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATATGCAGAAGTTGCTTaGTTGAAACGTGGGTGCCGC +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKYAEVA*LKRGCR
Trigger: GCGGCACCCACGTTTCAACAAAGCAACTTCTGCATA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGAGCCTTCGAAGGAATaGCGGTCAAGGTTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNREPSKE*RSRLFL
Trigger: GAGAAACAACCTTGACCGCAATTCCTTCGAAGGCTC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGTAATTGGGGAACTCTaGTATGTCTGGCAGAGGGAC +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRVIGEL*YVWQRD
Trigger: GTCCCTCTGCCAGACATACAAGAGTTCCCCAATTAC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGTAATTGGGGAACTCTaGTATGTCTGGCAGAGGGAC +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKVIGEL*YVWQRD
Trigger: GTCCCTCTGCCAGACATACAAGAGTTCCCCAATTAC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS TCA 90 bp TTATCCTTAGAAAGCAGAAGTCTCCGAGAACATACTCTTCCGCTTTaGACAGGTTTTCGCTGTCTCCTGAGACGATTTTGTACCTTATCT +
Preference number: 5 (lower is better)
Translates to: LSLESRSLREHTLPL*TGFRCLLRRFCTLS
Trigger: AGATAAGGTACAAAATCGTCTCAGGAGACAGCGAAAACCTGTTCAAAGCGGAAGAGTATGTTCTCGGAGACTTCTGCTTTCTAAGGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 90 bp GAGAGCGTGATAATTCCCGTTTCCCTGTCGATGATGAAGCTTTTATaGTCATTGCCAGACAGAATAGAGTACTCTAACTTGTCTAGGTCT +
Preference number: 5 (lower is better)
Translates to: ESVIIPVSLSMMKLL*SLPDRIEYSNLSRS
Trigger: AGACCTAGACAAGTTAGAGTACTCTATTCTGTCTGGCAATGATCATAAAAGCTTCATCATCGACAGGGAAACGGGAATTATCACGCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 90 bp GTTCTCCTTTACCTCAATTCCAGTTGGAAGAGTAACCCCGAACTGTaGAGTATGGGTATTGACGGAGTAAGAATCAAAGAAAATATCCTC +
Preference number: 5 (lower is better)
Translates to: VLLYLNSSWKSNPEL*SMGIDGVRIKENIL
Trigger: GAGGATATTTTCTTTGATTCTTACTCCGTCAATACCCATACTCCACAGTTCGGGGTTACTCTTCCAACTGGAATTGAGGTAAAGGAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAACATACTCTTCCGCTTaGAACAGGTTTTCGCTGTCT +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSETYSSA*NRFSLS
Trigger: AGACAGCGAAAACCTGTTCAAAGCGGAAGAGTATGT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTCACTGTTCACCTCCTaGTCTTCACTCACTTCCACA +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRSLFTS*SSLTST
Trigger: TGTGGAAGTGAGTGAAGACAAGGAGGTGAACAGTGA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAATTGGTATCTATTACTTaGATGAGGACCTGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSELVSIT*MRTWVR
Trigger: CCTCACCCAGGTCCTCATCAAAGTAATAGATACCAA...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTGGGGGCGGTGGTCATaGGTATCTATTACTTTGATG +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRWGRWS*VSITLM
Trigger: CATCAAAGTAATAGATACCAATGACCACCGCCCCCA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGGTGCGTGGTCATTCTaGTCACTGACATTGACAACA +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKGAWSF*SLTLTT
Trigger: TGTTGTCAATGTCAGTGACAAGAATGACCACGCACC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGGTGCGTGGTCATTCTaGTCACTGACATTGACAACA +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRGAWSF*SLTLTT
Trigger: TGTTGTCAATGTCAGTGACAAGAATGACCACGCACC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAATCTTTGGATGTGAACTaGGGAGAGGCATTGTCAGCA +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKSLDVN*GEALSA
Trigger: TGCTGACAATGCCTCTCCCAAGTTCACATCCAAAGA...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTCTTTGGATGTGAACTaGGGAGAGGCATTGTCAGCA +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRSLDVN*GEALSA
Trigger: TGCTGACAATGCCTCTCCCAAGTTCACATCCAAAGA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAAACTTCTCCCCAATGTaGCCTTCAGTGATGGAGTAC +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKNFSPM*PSVMEY
Trigger: GTACTCCATCACTGAAGGCAACATTGGGGAGAAGTT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGCAGTCTTGTGGTCCATaGAGAACTTCTCCCCAATGT +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRQSCGP*RTSPQC
Trigger: ACATTGGGGAGAAGTTCTCAATGGACCACAAGACTG...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACAGTCTTGTGGTCCATaGAGAACTTCTCCCCAATGT +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKQSCGP*RTSPQC
Trigger: ACATTGGGGAGAAGTTCTCAATGGACCACAAGACTG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAAGGCCAGTCAGCTTGTaGATTTCCAAGTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKRPVSL*ISKFSL
Trigger: CAAGGAGAACTTGGAAATCAACAAGCTGACTGGCCT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGAGGCCAGTCAGCTTGTaGATTTCCAAGTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRRPVSL*ISKFSL
Trigger: CAAGGAGAACTTGGAAATCAACAAGCTGACTGGCCT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAATCAGGCCAGTCAGCTaGTTGATTTCCAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKIRPVS*LISKFS
Trigger: GGAGAACTTGGAAATCAACAAGCTGACTGGCCTGAT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGATCAGGCCAGTCAGCTaGTTGATTTCCAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRIRPVS*LISKFS
Trigger: GGAGAACTTGGAAATCAACAAGCTGACTGGCCTGAT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAACTTCAACTCTAGCTTaGGAAGAGAAGGTCCCGTCT +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKTSTLA*EEKVPS
Trigger: AGACGGGACCTTCTCTTCCAAAGCTAGAGTTGAAGT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGTCTCCTTGGCAATCCTaGGTCCACTGCTTTCAAAGT +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRSPWQS*VHCFQS
Trigger: ACTTTGAAAGCAGTGGACCAAGGATTGCCAAGGAGA...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAGGTGAGATTATACAGTaGCTTCTTCTCAAAGTCCAG +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEGEIIQ*LLLKVQ
Trigger: CTGGACTTTGAGAAGAAGCAACTGTATAATCTCACC...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAACAGGAGGGTTATCATaGATGTCTTCCACTATGATG +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSETGGLS*MSSTMM
Trigger: CATCATAGTGGAAGACATCAATGATAACCCTCCTGT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGGCTTCATAAACCTGTaGTTCAAACAGAGGTGGGTT +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKGFINL*FKQRWV
Trigger: AACCCACCTCTGTTTGAACAACAGGTTTATGAAGCC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp GAAATGTCATACTTCAGAGGAAAAGAACAGCGTGAAACCCTGGTTACATCAGAAATTCTGTATGTCAGTTaGTCATTGGAGCTAGAATCC +
Preference number: 5 (lower is better)
Translates to: EMSYFRGKEQRETLVTSEILYVS*SLELES
Trigger: GGATTCTAGCTCCAATGACAAACTGACATACAGAAT...TTCTGATGTAACCAGGGTTTCACGCTGTTCTTTTCCTCTGAAGTATGACATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGATAGGTGGATCGCCTTaGTCTGTAGCTTTTACCATT +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRIGGSP*SVAFTI
Trigger: AATGGTAAAAGCTACAGACAAAGGCGATCCACCTAT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAATAGGTGGATCGCCTTaGTCTGTAGCTTTTACCATT +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKIGGSP*SVAFTI
Trigger: AATGGTAAAAGCTACAGACAAAGGCGATCCACCTAT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGACAGGAGGGTTATCATaGATGTCTTCCACTATGATG +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRTGGLS*MSSTMM
Trigger: CATCATAGTGGAAGACATCAATGATAACCCTCCTGT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGCTCTTTTGTCACTTGTaGTCACCTCGAGTTCAAAAT +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRLFCHL*SPRVQN
Trigger: ATTTTGAACTCGAGGTGACAACAAGTGACAAAAGAG...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAACTCTTTTGTCACTTGTaGTCACCTCGAGTTCAAAAT +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKLFCHL*SPRVQN
Trigger: ATTTTGAACTCGAGGTGACAACAAGTGACAAAAGAG...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGGCACGTGATTTAAGTTaGCAATACTGTAAGTCACGT +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRARDLS*QYCKSR
Trigger: ACGTGACTTACAGTATTGCAAACTTAAATCACGTGC...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAGCACGTGATTTAAGTTaGCAATACTGTAAGTCACGT +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKARDLS*QYCKSR
Trigger: ACGTGACTTACAGTATTGCAAACTTAAATCACGTGC...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAATATTCAGGGTGTATTaGTCCATTACTTCACGGTCA +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKIFRVY*SITSRS
Trigger: TGACCGTGAAGTAATGGACAAATACACCCTGAATAT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp CAAATATACAGACACTATAAAAACCGTGTCGTGGTGGTTTTGGTTCTAAACAGGATATTCAGGGTGTATTaGTCCATTACTTCACGGTCA +
Preference number: 5 (lower is better)
Translates to: QIYRHYKNRVVVVLVLNRIFRVY*SITSRS
Trigger: TGACCGTGAAGTAATGGACAAATACACCCTGAATAT...CCTGTTTAGAACCAAAACCACCACGACACGGTTTTTATAGTGTCTGTATATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS-3UTR CAA 90 bp TTTGGTTCTAAACAGGTATGCAGAAGGTCCCCTTCACACTTTCCAATAATGAAAATTCTGTATGTCAGTTaGTCATTGGAGCTAGAATCC +
Preference number: 5 (lower is better)
Translates to: FGSKQVCRRSPSHFPIMKILYVS*SLELES
Trigger: GGATTCTAGCTCCAATGACAAACTGACATACAGAAT...TTTCATTATTGGAAAGTGTGAAGGGGACCTTCTGCATACCTGTTTAGAACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS GCA 72 bp CCCCTGAAGCCACTGGCCACCTGGGCGCCTCGCCCATaGTTTGTCCCTTGCTGGCGGAGGTGGCCACCAAAA +
Preference number: 6 (lower is better)
Translates to: PLKPLATWAPRP*FVPCWRRWPPK
Trigger: TTTTGGTGGCCACCTCCGCCAGCAAGGGACAAAGCATGGGCGAGGCGCCCAGGTGGCCAGTGGCTTCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp CCACTTCCAGGGACACCGCGTGCCACTGCCCGTCGTTaGCCTGAATGCTCTGGACGGAGACAATCCCAGGGC +
Preference number: 6 (lower is better)
Translates to: PLPGTPRATARR*PECSGRRQSQG
Trigger: GCCCTGGGATTGTCTCCGTCCAGAGCATTCAGGTCAACGACGGGCAGTGGCACGCGGTGTCCCTGGAAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp TCCGAGGACGGCTTGGGTTTGGAGATCCACTCGATATaGAGCCTGGTGGTGGACGACTTCTGGGGGCGCCCG +
Preference number: 6 (lower is better)
Translates to: SEDGLGLEIHSI*SLVVDDFWGRP
Trigger: CGGGCGCCCCCAGAAGTCGTCCACCACCAGGCTCCATATCGAGTGGATCTCCAAACCCAAGCCGTCCTCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp CCTGCTCCACGTGAACTGTCAGCTTGGCCAGGCTGCTaGCCCCACTGCTACCGTACAGCTTCATCCCCCGGT +
Preference number: 6 (lower is better)
Translates to: PAPRELSAWPGC*PHCYRTASSPG
Trigger: ACCGGGGGATGAAGCTGTACGGTAGCAGTGGGGTCAGCAGCCTGGCCAAGCTGACAGTTCACGTGGAGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp GTTATGATGGGCGCGCACTCGTTGGCCTGCTCCACGTaGACTGTCAGCTTGGCCAGGCTGCTGACCCCACTG +
Preference number: 6 (lower is better)
Translates to: VMMGAHSLACST*TVSLARLLTPL
Trigger: CAGTGGGGTCAGCAGCCTGGCCAAGCTGACAGTTCACGTGGAGCAGGCCAACGAGTGCGCGCCCATCATAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp TGTCCAGCTCAGAGGGCGACAACGTCACCGCGGTTATaGTGGGCGCGCACTCGTTGGCCTGCTCCACGTGAA +
Preference number: 6 (lower is better)
Translates to: CPAQRATTSPRL*WARTRWPAPRE
Trigger: TTCACGTGGAGCAGGCCAACGAGTGCGCGCCCATCATAACCGCGGTGACGTTGTCGCCCTCTGAGCTGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp AGCTCGTCGGCGTCAATGGCAGACACGGTGGTTATCTaGTCCCCCACACCTAGGTCTCGGGGAATGGTCCCC +
Preference number: 6 (lower is better)
Translates to: SSSASMADTVVI*SPTPRSRGMVP
Trigger: GGGGACCATTCCCCGAGACCTAGGTGTGGGGGAGCAGATAACCACCGTGTCTGCCATTGACGCCGACGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp CCTCTGCCGACTCCGGGAGGAAGATCCCAAGCTACCTaGTGCAGGCATGTCCCTGGGTGGGTGTATGGACTC +
Preference number: 6 (lower is better)
Translates to: PLPTPGGRSQAT*CRHVPGWVYGL
Trigger: GAGTCCATACACCCACCCAGGGACATGCCTGCAGCAGGTAGCTTGGGATCTTCCTCCCGGAGTCGGCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp CCAGCTGCAGCTCGTCGGCGTCAATGGCAGACACGGTaGTTATCTGCTCCCCCACACCTAGGTCTCGGGGAA +
Preference number: 6 (lower is better)
Translates to: PAAARRRQWQTR*LSAPPHLGLGE
Trigger: TTCCCCGAGACCTAGGTGTGGGGGAGCAGATAACCACCGTGTCTGCCATTGACGCCGACGAGCTGCAGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp CCGAGCTCCGGAAAACCCCATCAGACACCGAAACGTTaGGGCTGTAGAACGGCTTCAGGGTGTGGCGGCGGA +
Preference number: 6 (lower is better)
Translates to: PSSGKPHQTPKR*GCRTASGCGGG
Trigger: TCCGCCGCCACACCCTGAAGCCGTTCTACAGCCTCAACGTTTCGGTGTCTGATGGGGTTTTCCGGAGCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp AGTAATCGTGGCGAGGACTTCGACTTCCCGGCGGTATaGCAAGCCCCAGTCAGACGCACGGATCCTCAGCGT +
Preference number: 6 (lower is better)
Translates to: SNRGEDFDFPAV*QAPVRRTDPQR
Trigger: ACGCTGAGGATCCGTGCGTCTGACTGGGGCTTGCCATACCGCCGGGAAGTCGAAGTCCTCGCCACGATTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp TCTGGTACCGGACCAGCTGCAGCTCGTCGGCGTCAATaGCAGACACGGTGGTTATCTGCTCCCCCACACCTA +
Preference number: 6 (lower is better)
Translates to: SGTGPAAARRRQ*QTRWLSAPPHL
Trigger: TAGGTGTGGGGGAGCAGATAACCACCGTGTCTGCCATTGACGCCGACGAGCTGCAGCTGGTCCGGTACCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp TTCTCGAGTCGCTTGGAATGCTGGGAGTGTAGGAAATaGGACGGACCGGCACCTGGGGCGGGATGTCGGAGT +
Preference number: 6 (lower is better)
Translates to: FSSRLECWECRK*DGPAPGAGCRS
Trigger: ACTCCGACATCCCGCCCCAGGTGCCGGTCCGTCCCATTTCCTACACTCCCAGCATTCCAAGCGACTCGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000098796.10
ENSMUST00000186342.3
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp CGACTGCACCTCAGACAGGCTCTCCCGGGCACTGTATaGCTGGGAGGGCTTTTCCTCCAGGGGCTTCTTAGA +
Preference number: 6 (lower is better)
Translates to: RLHLRQALPGTV*LGGLFLQGLLR
Trigger: TCTAAGAAGCCCCTGGAGGAAAAGCCCTCCCAGCCATACAGTGCCCGGGAGAGCCTGTCTGAGGTGCAGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000098796.10
ENSMUST00000186342.3
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp GCATTCGATCCCTCATCAGCGTCACTCGCAAAGACCTaGACGACCGACGTCCCTTTGGCAGCGCTGGACCCG +
Preference number: 6 (lower is better)
Translates to: AFDPSSASLAKT*TTDVPLAALDP
Trigger: CGGGTCCAGCGCTGCCAAAGGGACGTCGGTCGTCAAGGTCTTTGCGAGTGACGCTGATGAGGGATCGAATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp TTCGACGGTGACTTTCACCACGACGTGGGCCACCGCTaGCGGCTCGTGTTCCTTAGTCACCTCTACCACCAC +
Preference number: 6 (lower is better)
Translates to: FDGDFHHDVGHR*RLVFLSHLYHH
Trigger: GTGGTGGTAGAGGTGACTAAGGAACACGAGCCGTCAGCGGTGGCCCACGTCGTGGTGAAAGTCACCGTCGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp CATTCGATCCCTCATCAGCGTCACTCGCAAAGACCTTaGCGACCGACGTCCCTTTGGCAGCGCTGGACCCGA +
Preference number: 6 (lower is better)
Translates to: HSIPHQRHSQRP*RPTSLWQRWTR
Trigger: TCGGGTCCAGCGCTGCCAAAGGGACGTCGGTCGTCAAGGTCTTTGCGAGTGACGCTGATGAGGGATCGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp TTCCTCCGTAGAGGCAGGGGTTGGAGGAGCACGGGTTaGCGCTCACCTCACAGAACGTCCCTACGTACAACG +
Preference number: 6 (lower is better)
Translates to: FLRRGRGWRSTG*RSPHRTSLRTT
Trigger: CGTTGTACGTAGGGACGTTCTGTGAGGTGAGCGTCAACCCGTGCTCCTCCAACCCCTGCCTCTACGGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp GCTCATCATGACCTCAGACTCCACTTCACAGCACGCTaGCACGTCGGAGCAGGAAGCCGTCGAGGCGTACAC +
Preference number: 6 (lower is better)
Translates to: AHHDLRLHFTAR*HVGAGSRRGVH
Trigger: GTGTACGCCTCGACGGCTTCCTGCTCCGACGTGTCAGCGTGCTGTGAAGTGGAGTCTGAGGTCATGATGAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp AGTGGCCGTCGTCCCCGCTCTCGTAGTCGCTCATCATaGCCTCAGACTCCACTTCACAGCACGCTGACACGT +
Preference number: 6 (lower is better)
Translates to: SGRRPRSRSRSS*PQTPLHSTLTR
Trigger: ACGTGTCAGCGTGCTGTGAAGTGGAGTCTGAGGTCATGATGAGCGACTACGAGAGCGGGGACGACGGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp CCGCCTGACCTCTCGACAAAGAGTAAGACGTCCAGATaGGAATGGGGTTCGGAGGGCTGCAGGCTGACGATC +
Preference number: 6 (lower is better)
Translates to: PPDLSTKSKTSR*EWGSEGCRLTI
Trigger: GATCGTCAGCCTGCAGCCCTCCGAACCCCATTCGCATCTGGACGTCTTACTCTTTGTCGAGAGGTCAGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp TGGGTTTGGAGATCCACTCGATATGGAGCCTGGTGGTaGACGACTTCTGGGGGCGCCCGTTGTCAACTGCCT +
Preference number: 6 (lower is better)
Translates to: WVWRSTRYGAWW*TTSGGARCQLP
Trigger: AGGCAGTTGACAACGGGCGCCCCCAGAAGTCGTCCACCACCAGGCTCCATATCGAGTGGATCTCCAAACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp GCTTGGGTTTGGAGATCCACTCGATATGGAGCCTGGTaGTGGACGACTTCTGGGGGCGCCCGTTGTCAACTG +
Preference number: 6 (lower is better)
Translates to: AWVWRSTRYGAW*WTTSGGARCQL
Trigger: CAGTTGACAACGGGCGCCCCCAGAAGTCGTCCACCACCAGGCTCCATATCGAGTGGATCTCCAAACCCAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp CGTTCTCATCCCGCACGTGCACCACCACCGTTGTGTTaGTGGACAAACCGGCCATGTTGGTCCCTTGCACTG +
Preference number: 6 (lower is better)
Translates to: RSHPARAPPPLC*WTNRPCWSLAL
Trigger: CAGTGCAAGGGACCAACATGGCCGGTTTGTCCACCAACACAACGGTGGTGGTGCACGTGCGGGATGAGAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp GCGAAGCGAATGGCGACGGTGTGGTTCAGCATCTCCTaGGTCACTTGTTGGATGTGCACGGTGATGTCGGCC +
Preference number: 6 (lower is better)
Translates to: AKRMATVWFSIS*VTCWMCTVMSA
Trigger: GGCCGACATCACCGTGCACATCCAACAAGTGACCCAGGAGATGCTGAACCACACCGTCGCCATTCGCTTCGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp TGCACCTCAGACAGGCTCTCCCGGGCACTGTATGGCTaGGAGGGCTTTTCCTCCAGGGGCTTCTTAGAGAGA +
Preference number: 6 (lower is better)
Translates to: CTSDRLSRALYG*EGFSSRGFLER
Trigger: TCTCTCTAAGAAGCCCCTGGAGGAAAAGCCCTCCCAGCCATACAGTGCCCGGGAGAGCCTGTCTGAGGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000098796.10
ENSMUST00000186342.3
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp CAAACACTTCAGCGTGAGCGCCCGTCAGGGAGTCAGTaGCCCGCACGCTTAGCTTATAGGCTGGGTGGGACT +
Preference number: 6 (lower is better)
Translates to: QTLQRERPSGSQ*PARLAYRLGGT
Trigger: AGTCCCACCCAGCCTATAAGCTAAGCGTGCGGGCAACTGACTCCCTGACGGGCGCTCACGCTGAAGTGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp GCGTCACTCGCAAAGACCTTGACGACCGACGTCCCTTaGGCAGCGCTGGACCCGATGTTCACCTCGTACTTG +
Preference number: 6 (lower is better)
Translates to: ASLAKTLTTDVP*AALDPMFTSYL
Trigger: CAAGTACGAGGTGAACATCGGGTCCAGCGCTGCCAAAGGGACGTCGGTCGTCAAGGTCTTTGCGAGTGACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp GGCGACGGTGTGGTTCAGCATCTCCTGGGTCACTTGTaGGATGTGCACGGTGATGTCGGCCACCGTGGTGAA +
Preference number: 6 (lower is better)
Translates to: GDGVVQHLLGHL*DVHGDVGHRGE
Trigger: TTCACCACGGTGGCCGACATCACCGTGCACATCCAACAAGTGACCCAGGAGATGCTGAACCACACCGTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp CTAGGCTTCTGTATGGAGTCGCTGTCTGAGGGCGAGTaGGAAGGCGGCGGTGGAGGCAAGTTTGGAGCTACG +
Preference number: 6 (lower is better)
Translates to: LGFCMESLSEGE*EGGGGGKFGAT
Trigger: CGTAGCTCCAAACTTGCCTCCACCGCCGCCTTCCAACTCGCCCTCAGACAGCGACTCCATACAGAAGCCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000098796.10
ENSMUST00000186342.3
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp CGCGAAGCGAATGGCGACGGTGTGGTTCAGCATCTCCTGGGTCACTaGTTGGATGTGCACGGTGATGTCGGCCACCGTGGTGAATTTCCC +
Preference number: 6 (lower is better)
Translates to: REANGDGVVQHLLGH*LDVHGDVGHRGEFP
Trigger: GGGAAATTCACCACGGTGGCCGACATCACCGTGCACATCCAACAAGTGACCCAGGAGATGCTGAACCACACCGTCGCCATTCGCTTCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp CTGCACACAGCCACGGCTTTTCGATGCCCGTGCATAGACTCGGGGTaGAAGGTGCTGAATTCTGGATGCTCTGGGATCGCGGAGCCTTCG +
Preference number: 6 (lower is better)
Translates to: LHTATAFRCPCIDSG*KVLNSGCSGIAEPS
Trigger: CGAAGGCTCCGCGATCCCAGAGCATCCAGAATTCAGCACCTTCAACCCCGAGTCTATGCACGGGCATCGAAAAGCCGTGGCTGTGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000098796.10
ENSMUST00000186342.3
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp AAGTCCCAGCTAGGCTTCTGTATGGAGTCGCTGTCTGAGGGCGAGTaGGAAGGCGGCGGTGGAGGCAAGTTTGGAGCTACGCTGCACACA +
Preference number: 6 (lower is better)
Translates to: KSQLGFCMESLSEGE*EGGGGGKFGATLHT
Trigger: TGTGTGCAGCGTAGCTCCAAACTTGCCTCCACCGCCGCCTTCCAACTCGCCCTCAGACAGCGACTCCATACAGAAGCCTAGCTGGGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000098796.10
ENSMUST00000186342.3
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp TCTCCAGGATGCTGTAGTCAGTCCCTCGCGCGTACATaGCAACCGCGTGGGAGGAGTAGGTTCTCAGACGCA +
Preference number: 6 (lower is better)
Translates to: SPGCCSQSLART*QPRGRSRFSDA
Trigger: TGCGTCTGAGAACCTACTCCTCCCACGCGGTTGTCATGTACGCGCGAGGGACTGACTACAGCATCCTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp AAAGTCCCAGCTAGGCTTCTGTATGGAGTCGCTGTCTaGGGGCGAGTTGGAAGGCGGCGGTGGAGGCAAGTT +
Preference number: 6 (lower is better)
Translates to: KVPARLLYGVAV*GRVGRRRWRQV
Trigger: AACTTGCCTCCACCGCCGCCTTCCAACTCGCCCTCAGACAGCGACTCCATACAGAAGCCTAGCTGGGACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000098796.10
ENSMUST00000186342.3
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp TGTCCCTGGGTGGGTGTATGGACTCGAACTGGTCGCTaGACTCTGGAGGCAATGGTGGCAGTTCATCGGGTG +
Preference number: 6 (lower is better)
Translates to: CPWVGVWTRTGR*TLEAMVAVHRV
Trigger: CACCCGATGAACTGCCACCATTGCCTCCAGAGTTCAGCGACCAGTTCGAGTCCATACACCCACCCAGGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp CGGCGGGGTAGAAATTGGGCAGGTACTGATTCAGGTTaGACCTCTGCCGACTCCGGGAGGAAGATCCCAAGC +
Preference number: 6 (lower is better)
Translates to: RRGRNWAGTDSG*TSADSGRKIPS
Trigger: GCTTGGGATCTTCCTCCCGGAGTCGGCAGAGGTTCAACCTGAATCAGTACCTGCCCAATTTCTACCCCGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp TCTGCCAACATTTTGGCAACACCGGTCTCCTCGCACTaGAAGTTGACCGGCTTGCGACTGGCAGCCACCGTT +
Preference number: 6 (lower is better)
Translates to: SANILATPVSSH*KLTGLRLAATV
Trigger: AACGGTGGCTGCCAGTCGCAAGCCGGTCAACTTGCAGTGCGAGGAGACCGGTGTTGCCAAAATGTTGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp CCGTTTTGGGTTCGATGGAGAACCTGCCGTGCTCGTTaGCTTCCTCGATGCTGTAGGAGAGCTCCGCATTGG +
Preference number: 6 (lower is better)
Translates to: PFWVRWRTCRAR*LPRCCRRAPHW
Trigger: CCAATGCGGAGCTCTCCTACAGCATCGAGGAAGGCAACGAGCACGGCAGGTTCTCCATCGAACCCAAAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp CTGTCTGCATCGCAGGCTCTCACACACATCACGAAATaGCCGTGTGCGGCGTGCTCGCTGATTCTGGCTTCA +
Preference number: 6 (lower is better)
Translates to: LSASQALTHITK*PCAACSLILAS
Trigger: TGAAGCCAGAATCAGCGAGCACGCCGCACACGGGCATTTCGTGATGTGTGTGAGAGCCTGCGATGCAGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp GTAGGTGATTTCCGCGTTGGCCTCGATATCCCGACTTaGGGCGTACACCTGGAGAACCTCCGTCCCAATGAC +
Preference number: 6 (lower is better)
Translates to: VGDFRVGLDIPT*GVHLENLRPND
Trigger: GTCATTGGGACGGAGGTTCTCCAGGTGTACGCCGCAAGTCGGGATATCGAGGCCAACGCGGAAATCACCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp GCTGAACTCTGGAGGCAATGGTGGCAGTTCATCGGGTaGAGGGAAGTCCTCTGGTGGGGGTGGAAAGTCACT +
Preference number: 6 (lower is better)
Translates to: AELWRQWWQFIG*REVLWWGWKVT
Trigger: AGTGACTTTCCACCCCCACCAGAGGACTTCCCTGCACCCGATGAACTGCCACCATTGCCTCCAGAGTTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp CTGATCACAGTCCTCCACGGTGATGATGGCGTAGGTTaGGTCCTTGTCCAGCTCAGAGGGCGACAACGTCAC +
Preference number: 6 (lower is better)
Translates to: LITVLHGDDGVG*VLVQLRGRQRH
Trigger: GTGACGTTGTCGCCCTCTGAGCTGGACAAGGACCCAACCTACGCCATCATCACCGTGGAGGACTGTGATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp AGAACCGTGACGTCCAGAAGGCGCCAGGCAGCCCTCTaGGGTATACCGAGGTCGTACACGGTAATATTCAGG +
Preference number: 6 (lower is better)
Translates to: RTVTSRRRQAAL*GIPRSYTVIFR
Trigger: CCTGAATATTACCGTGTACGACCTCGGTATACCCCAGAGGGCTGCCTGGCGCCTTCTGGACGTCACGGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp TCATTCTGGTCTTCGACGGTGACTTTCACCACGACGTaGGCCACCGCTGACGGCTCGTGTTCCTTAGTCACC +
Preference number: 6 (lower is better)
Translates to: SFWSSTVTFTTT*ATADGSCSLVT
Trigger: GGTGACTAAGGAACACGAGCCGTCAGCGGTGGCCCACGTCGTGGTGAAAGTCACCGTCGAAGACCAGAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp GCGTTGGCCTCGATATCCCGACTTGCGGCGTACACCTaGAGAACCTCCGTCCCAATGACAATGTCCTCAGAC +
Preference number: 6 (lower is better)
Translates to: ALASISRLAAYT*RTSVPMTMSSD
Trigger: GTCTGAGGACATTGTCATTGGGACGGAGGTTCTCCAGGTGTACGCCGCAAGTCGGGATATCGAGGCCAACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp TCCGGGGTGAGATTCGCGAAGCGAATGGCGACGGTGTaGTTCAGCATCTCCTGGGTCACTTGTTGGATGTGC +
Preference number: 6 (lower is better)
Translates to: SGVRFAKRMATV*FSISWVTCWMC
Trigger: GCACATCCAACAAGTGACCCAGGAGATGCTGAACCACACCGTCGCCATTCGCTTCGCGAATCTCACCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp CCAGTCCGATGTTCCACGGGGTGGACACGTAGTGGTTaGGAGAGGCATCCTCACAGTGCTTCCCTCTGTACT +
Preference number: 6 (lower is better)
Translates to: PVRCSTGWTRSG*ERHPHSASLCT
Trigger: AGTACAGAGGGAAGCACTGTGAGGATGCCTCTCCCAACCACTACGTGTCCACCCCGTGGAACATCGGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp TACCTATTCCCTCGGCCAGTCCGATGTTCCACGGGGTaGACACGTAGTGGTTGGGAGAGGCATCCTCACAGT +
Preference number: 6 (lower is better)
Translates to: YLFPRPVRCSTG*TRSGWERHPHS
Trigger: ACTGTGAGGATGCCTCTCCCAACCACTACGTGTCCACCCCGTGGAACATCGGACTGGCCGAGGGAATAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp TGCGGTCAAGGTTGTTTCTCGAGTCGCTTGGAATGCTaGGAGTGTAGGAAATGGGACGGACCGGCACCTGGG +
Preference number: 6 (lower is better)
Translates to: CGQGCFSSRLEC*ECRKWDGPAPG
Trigger: CCCAGGTGCCGGTCCGTCCCATTTCCTACACTCCCAGCATTCCAAGCGACTCGAGAAACAACCTTGACCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000098796.10
ENSMUST00000186342.3
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp GCAGGCATGTCCCTGGGTGGGTGTATGGACTCGAACTaGTCGCTGAACTCTGGAGGCAATGGTGGCAGTTCA +
Preference number: 6 (lower is better)
Translates to: AGMSLGGCMDSN*SLNSGGNGGSS
Trigger: TGAACTGCCACCATTGCCTCCAGAGTTCAGCGACCAGTTCGAGTCCATACACCCACCCAGGGACATGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp CGTCGGAGCAGGAAGCCGTCGAGGCGTACACGGACATaGGCATGTTTTCTATGGTGGGCGCTTCGAAGTTTC +
Preference number: 6 (lower is better)
Translates to: RRSRKPSRRTRT*ACFLWWALRSF
Trigger: GAAACTTCGAAGCGCCCACCATAGAAAACATGCCCATGTCCGTGTACGCCTCGACGGCTTCCTGCTCCGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp TCGTTCTCATCCCGCACGTGCACCACCACCGTTGTGTaGGTGGACAAACCGGCCATGTTGGTCCCTTGCACT +
Preference number: 6 (lower is better)
Translates to: SFSSRTCTTTVV*VDKPAMLVPCT
Trigger: AGTGCAAGGGACCAACATGGCCGGTTTGTCCACCAACACAACGGTGGTGGTGCACGTGCGGGATGAGAACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp AATGGCGACGGTGTGGTTCAGCATCTCCTGGGTCACTaGTTGGATGTGCACGGTGATGTCGGCCACCGTGGT +
Preference number: 6 (lower is better)
Translates to: NGDGVVQHLLGH*LDVHGDVGHRG
Trigger: ACCACGGTGGCCGACATCACCGTGCACATCCAACAAGTGACCCAGGAGATGCTGAACCACACCGTCGCCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp GAAGCGAATGGCGACGGTGTGGTTCAGCATCTCCTGGGTCACTTGTaGGATGTGCACGGTGATGTCGGCCACCGTGGTGAATTTCCCATC +
Preference number: 6 (lower is better)
Translates to: EANGDGVVQHLLGHL*DVHGDVGHRGEFPI
Trigger: GATGGGAAATTCACCACGGTGGCCGACATCACCGTGCACATCCAACAAGTGACCCAGGAGATGCTGAACCACACCGTCGCCATTCGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp TACCGGATCTCTCCGTCTCTGCCTGTGTCTTCGTCGTaGGCTGACACGGTCATGACTGATGAGCCAGTAGGG +
Preference number: 6 (lower is better)
Translates to: YRISPSLPVSSS*ADTVMTDEPVG
Trigger: CCCTACTGGCTCATCAGTCATGACCGTGTCAGCTCACGACGAAGACACAGGCAGAGACGGAGAGATCCGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp GATGTCAAACCACAGAGGCATGCCAGGGGGCTCAACTaGGATCACGCCGATCATGTGAGCCACCGGATCACT +
Preference number: 6 (lower is better)
Translates to: DVKPQRHARGLN*DHADHVSHRIT
Trigger: AGTGATCCGGTGGCTCACATGATCGGCGTGATCTCAGTTGAGCCCCCTGGCATGCCTCTGTGGTTTGACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp AAAGAGCGCCTGTTGCGGGATCGAGGCGGAATTTCTTaGGGCTGGCTGGATCGATGCTGCTCTGCAGAGTGT +
Preference number: 6 (lower is better)
Translates to: KERLLRDRGGIS*GWLDRCCSAEC
Trigger: ACACTCTGCAGAGCAGCATCGATCCAGCCAGCCTCAAGAAATTCCGCCTCGATCCCGCAACAGGCGCTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp TCGTTCACATCTTCTAACGTGAGCACAATAGCCGCCTaGCAGGACCTCCCACCTCCGTCCGTGGCCTTGACT +
Preference number: 6 (lower is better)
Translates to: SFTSSNVSTIAA*QDLPPPSVALT
Trigger: AGTCAAGGCCACGGACGGAGGTGGGAGGTCCTGTCAGGCGGCTATTGTGCTCACGTTAGAAGATGTGAACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp CTCTGGGTGGATTGCCGTTGTCGGCAGCTTGCACCGTaGGTGTATAACCTGAGATCGTTTCCCGGTCTAGGG +
Preference number: 6 (lower is better)
Translates to: LWVDCRCRQLAP*VYNLRSFPGLG
Trigger: CCCTAGACCGGGAAACGATCTCAGGTTATACACTCACGGTGCAAGCTGCCGACAACGGCAATCCACCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp AGTTGCGCCAGTAGTCACCAACAAACTCCTCCGGGGTaGGATTCGCGAAGCGAATGGCGACGGTGTGGTTCA +
Preference number: 6 (lower is better)
Translates to: SCASSHQQTPPG*DSRSEWRRCGS
Trigger: TGAACCACACCGTCGCCATTCGCTTCGCGAATCTCACCCCGGAGGAGTTTGTTGGTGACTACTGGCGCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp CCAGCTCATAGAGCTGGGTCTCTAGGAAATCAAGCCTaGCAGTCAAAACAACGACGCCGCTGGTCGGGTGGA +
Preference number: 6 (lower is better)
Translates to: PAHRAGSLGNQA*QSKQRRRWSGG
Trigger: TCCACCCGACCAGCGGCGTCGTTGTTTTGACTGGCAGGCTTGATTTCCTAGAGACCCAGCTCTATGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp AACTCATTTCCGGCTTCAATCTGGTACCGGACCAGCTaGAGCTCGTCGGCGTCAATGGCAGACACGGTGGTT +
Preference number: 6 (lower is better)
Translates to: NSFPASIWYRTS*SSSASMADTVV
Trigger: AACCACCGTGTCTGCCATTGACGCCGACGAGCTGCAGCTGGTCCGGTACCAGATTGAAGCCGGAAATGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp ACGAGACCACTCCCGTTTTGGGTTCGATGGAGAACCTaGCGTGCTCGTTGCCTTCCTCGATGCTGTAGGAGA +
Preference number: 6 (lower is better)
Translates to: TRPLPFWVRWRT*RARCLPRCCRR
Trigger: TCTCCTACAGCATCGAGGAAGGCAACGAGCACGGCAGGTTCTCCATCGAACCCAAAACGGGAGTGGTCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp GGTGGTGGACGACTTCTGGGGGCGCCCGTTGTCAACTaGCTTAATGGAAAGAATGTCATATTCTCCGGCCGC +
Preference number: 6 (lower is better)
Translates to: GGGRLLGAPVVN*LNGKNVIFSGR
Trigger: GCGGCCGGAGAATATGACATTCTTTCCATTAAGGCAGTTGACAACGGGCGCCCCCAGAAGTCGTCCACCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp CGATCTGTATGTCATTCTTCCGGACGCCCAGGATGTTaGGTAGGGCTCGCTGGAAGTTGCGCCAGTAGTCAC +
Preference number: 6 (lower is better)
Translates to: RSVCHSSGRPGC*VGLAGSCASSH
Trigger: GTGACTACTGGCGCAACTTCCAGCGAGCCCTACGCAACATCCTGGGCGTCCGGAAGAATGACATACAGATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp GACAGGTGGGCATGTCCCGTCTTTGCAGAGACACACTaGTGTTCTGTGGTGTCGGGGAGTCACGAAACTCAG +
Preference number: 6 (lower is better)
Translates to: DRWACPVFAETH*CSVVSGSHETQ
Trigger: CTGAGTTTCGTGACTCCCCGACACCACAGAACAGCAGTGTGTCTCTGCAAAGACGGGACATGCCCACCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp GCGAGGGATTGCAAACGCCTCCATTCTGACAGGGGCTaGTGGAGCAGTCTTCTGTGGCGGTCAATAAGCATC +
Preference number: 6 (lower is better)
Translates to: ARDCKRLHSDRG*WSSLLWRSISI
Trigger: GATGCTTATTGACCGCCACAGAAGACTGCTCCAGCAGCCCCTGTCAGAATGGAGGCGTTTGCAATCCCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp GCTACGCTGCACACAGCCACGGCTTTTCGATGCCCGTaGATAGACTCGGGGTTGAAGGTGCTGAATTCTGGA +
Preference number: 6 (lower is better)
Translates to: ATLHTATAFRCP*IDSGLKVLNSG
Trigger: TCCAGAATTCAGCACCTTCAACCCCGAGTCTATGCACGGGCATCGAAAAGCCGTGGCTGTGTGCAGCGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000098796.10
ENSMUST00000186342.3
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp TCAGGAGCACGGTGGAGAACAACCGGGGTTCCTCTGTaGCTTGGTCCCTGGCCTCGATCTTTAGGTAATGCA +
Preference number: 6 (lower is better)
Translates to: SGARWRTTGVPL*LGPWPRSLGNA
Trigger: TGCATTACCTAAAGATCGAGGCCAGGGACCAAGCCACAGAGGAACCCCGGTTGTTCTCCACCGTGCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp CCGATTCCTCAAACGAAATCGGCTCCGAGGACGGCTTaGGTTTGGAGATCCACTCGATATGGAGCCTGGTGG +
Preference number: 6 (lower is better)
Translates to: PIPQTKSAPRTA*VWRSTRYGAWW
Trigger: CCACCAGGCTCCATATCGAGTGGATCTCCAAACCCAAGCCGTCCTCGGAGCCGATTTCGTTTGAGGAATCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp CATGTCCCGTCTTTGCAGAGACACACTGCTGTTCTGTaGTGTCGGGGAGTCACGAAACTCAGTCTGGCCGTG +
Preference number: 6 (lower is better)
Translates to: HVPSLQRHTAVL*CRGVTKLSLAV
Trigger: CACGGCCAGACTGAGTTTCGTGACTCCCCGACACCACAGAACAGCAGTGTGTCTCTGCAAAGACGGGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp GCAACACCGGTCTCCTCGCACTGCAAGTTGACCGGCTaGCGACTGGCAGCCACCGTTAGGTTGATGTATAAC +
Preference number: 6 (lower is better)
Translates to: ATPVSSHCKLTG*RLAATVRLMYN
Trigger: GTTATACATCAACCTAACGGTGGCTGCCAGTCGCAAGCCGGTCAACTTGCAGTGCGAGGAGACCGGTGTTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp AACATTTTGGCAACACCGGTCTCCTCGCACTGCAAGTaGACCGGCTTGCGACTGGCAGCCACCGTTAGGTTG +
Preference number: 6 (lower is better)
Translates to: NILATPVSSHCK*TGLRLAATVRL
Trigger: CAACCTAACGGTGGCTGCCAGTCGCAAGCCGGTCAACTTGCAGTGCGAGGAGACCGGTGTTGCCAAAATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp AACATTTTGGCAACACCGGTCTCCTCGCACTGCAAGTTGACCGGCTaGCGACTGGCAGCCACCGTTAGGTTGATGTATAACGGCGTGGCA +
Preference number: 6 (lower is better)
Translates to: NILATPVSSHCKLTG*RLAATVRLMYNGVA
Trigger: TGCCACGCCGTTATACATCAACCTAACGGTGGCTGCCAGTCGCAAGCCGGTCAACTTGCAGTGCGAGGAGACCGGTGTTGCCAAAATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp CACTCGATATGGAGCCTGGTGGTGGACGACTTCTGGGGGCGCCCGTaGTCAACTGCCTTAATGGAAAGAATGTCATATTCTCCGGCCGCA +
Preference number: 6 (lower is better)
Translates to: HSIWSLVVDDFWGRP*STALMERMSYSPAA
Trigger: TGCGGCCGGAGAATATGACATTCTTTCCATTAAGGCAGTTGACAACGGGCGCCCCCAGAAGTCGTCCACCACCAGGCTCCATATCGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp GCGTCTTGGGTAAACTTGAGGGGACTCTCTCTGCTCTCCTTTACGTaGATTTTCACGGAGGCCATGCTTGTGAACCTGCCGTCGGAGGCG +
Preference number: 6 (lower is better)
Translates to: ASWVNLRGLSLLSFT*IFTEAMLVNLPSEA
Trigger: CGCCTCCGACGGCAGGTTCACAAGCATGGCCTCCGTGAAAATCAACGTAAAGGAGAGCAGAGAGAGTCCCCTCAAGTTTACCCAAGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp CTGCTCGAGAGCCGCATCCTCACTGACCACGGTGGTGTAGGTGTCTaGGCTGAACACGGGGCTGTTATCGTTGATGTCTGTGACGTTGAT +
Preference number: 6 (lower is better)
Translates to: LLESRILTDHGGVGV*AEHGAVIVDVCDVD
Trigger: ATCAACGTCACAGACATCAACGATAACAGCCCCGTGTTCAGCCAAGACACCTACACCACCGTGGTCAGTGAGGATGCGGCTCTCGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp GTAGGGGGTGTAGGGTTCTCTACATGGACTGTTCTCGCCAGCGCCTaGTTTCTGAGGTTCGGACATATCGGCGGGGTAGAAATTGGGCAG +
Preference number: 6 (lower is better)
Translates to: VGGVGFSTWTVLASA*FLRFGHIGGVEIGQ
Trigger: CTGCCCAATTTCTACCCCGCCGATATGTCCGAACCTCAGAAACAAGGCGCTGGCGAGAACAGTCCATGTAGAGAACCCTACACCCCCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp GGCTGTCCCAGTCGACGGCCCCGACGGCTTTCACTTTaGATGCTTTACTCCCTGGGAAAGACCTCACTGTTT +
Preference number: 6 (lower is better)
Translates to: GCPSRRPRRLSL*MLYSLGKTSLF
Trigger: AAACAGTGAGGTCTTTCCCAGGGAGTAAAGCATTCAAAGTGAAAGCCGTCGGGGCCGTCGACTGGGACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp CAAACACTGGAGCATTATCATTCTGGTCTTCGACGGTaGCTTTCACCACGACGTGGGCCACCGCTGACGGCT +
Preference number: 6 (lower is better)
Translates to: QTLEHYHSGLRR*LSPRRGPPLTA
Trigger: AGCCGTCAGCGGTGGCCCACGTCGTGGTGAAAGTCACCGTCGAAGACCAGAATGATAATGCTCCAGTGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp GGCAGCGCTGGACCCGATGTTCACCTCGTACTTGGTTaGGCGAAACTGAGGTGCGTTGTCATTGTCGTCTGT +
Preference number: 6 (lower is better)
Translates to: GSAGPDVHLVLG*AKLRCVVIVVC
Trigger: ACAGACGACAATGACAACGCACCTCAGTTTCGCTCAACCAAGTACGAGGTGAACATCGGGTCCAGCGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp GACTTGCGGCGTACACCTGGAGAACCTCCGTCCCAATaGCAATGTCCTCAGACACACTGGCGCCATATTCAC +
Preference number: 6 (lower is better)
Translates to: DLRRTPGEPPSQ*QCPQTHWRHIH
Trigger: GTGAATATGGCGCCAGTGTGTCTGAGGACATTGTCATTGGGACGGAGGTTCTCCAGGTGTACGCCGCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp GAGGACCTGGGTGAGGATCGTGGTGGTCCCATCTGTTaGCTCCACGGTGAGGTTATAGCTGGATTTCTGTTC +
Preference number: 6 (lower is better)
Translates to: EDLGEDRGGPIC*LHGEVIAGFLF
Trigger: GAACAGAAATCCAGCTATAACCTCACCGTGGAGGCAACAGATGGGACCACCACGATCCTCACCCAGGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp ATCGCAGGCTCTCACACACATCACGAAATGCCCGTGTaGGGCGTGCTCGCTGATTCTGGCTTCATAAACCTG +
Preference number: 6 (lower is better)
Translates to: IAGSHTHHEMPV*GVLADSGFINL
Trigger: CAGGTTTATGAAGCCAGAATCAGCGAGCACGCCGCACACGGGCATTTCGTGATGTGTGTGAGAGCCTGCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp AGGCATCCTCACAGTGCTTCCCTCTGTACTCCTGGCTaGAGTTACAGTGATAGGAGCCGTGTGTGTTCTCGC +
Preference number: 6 (lower is better)
Translates to: RHPHSASLCTPG*SYSDRSRVCSR
Trigger: GCGAGAACACACACGGCTCCTATCACTGTAACTGCAGCCAGGAGTACAGAGGGAAGCACTGTGAGGATGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp CTGGATGCTCTGGGATCGCGGAGCCTTCGAAGGAATTaGGGTCAAGGTTGTTTCTCGAGTCGCTTGGAATGC +
Preference number: 6 (lower is better)
Translates to: LDALGSRSLRRN*GQGCFSSRLEC
Trigger: GCATTCCAAGCGACTCGAGAAACAACCTTGACCGCAATTCCTTCGAAGGCTCCGCGATCCCAGAGCATCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000098796.10
ENSMUST00000186342.3
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp TTTGGAGCTACGCTGCACACAGCCACGGCTTTTCGATaGCCGTGCATAGACTCGGGGTTGAAGGTGCTGAAT +
Preference number: 6 (lower is better)
Translates to: FGATLHTATAFR*PCIDSGLKVLN
Trigger: ATTCAGCACCTTCAACCCCGAGTCTATGCACGGGCATCGAAAAGCCGTGGCTGTGTGCAGCGTAGCTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000098796.10
ENSMUST00000186342.3
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp ATCCACTCGATATGGAGCCTGGTGGTGGACGACTTCTaGGGGCGCCCGTTGTCAACTGCCTTAATGGAAAGA +
Preference number: 6 (lower is better)
Translates to: IHSIWSLVVDDF*GRPLSTALMER
Trigger: TCTTTCCATTAAGGCAGTTGACAACGGGCGCCCCCAGAAGTCGTCCACCACCAGGCTCCATATCGAGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp AACGGTATCCCGGTGGTGGACAACACGCCCGACGTGTaGCTGATTTTAAATCTGCGGTCTGGGTTGAGGATG +
Preference number: 6 (lower is better)
Translates to: NGIPVVDNTPDV*LILNLRSGLRM
Trigger: CATCCTCAACCCAGACCGCAGATTTAAAATCAGCCACACGTCGGGCGTGTTGTCCACCACCGGGATACCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp GACAGTGATGGGAACCAGAACTTCTGCAGAGAAAGCTaGACTCCCTCCGTCCTTGGCGACCACTGTGACAAG +
Preference number: 6 (lower is better)
Translates to: DSDGNQNFCRES*TPSVLGDHCDK
Trigger: CTTGTCACAGTGGTCGCCAAGGACGGAGGGAGTCCAGCTTTCTCTGCAGAAGTTCTGGTTCCCATCACTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp AGGAAATCTTCCGATTCAATCCTGTGTCTGCATCAGTaGCCTGCACTCTGGTCAGCGGTGTCCCAGGCTCTG +
Preference number: 6 (lower is better)
Translates to: RKSSDSILCLHQ*PALWSAVSQAL
Trigger: CAGAGCCTGGGACACCGCTGACCAGAGTGCAGGCCACTGATGCAGACACAGGATTGAATCGGAAGATTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp TCGCCACATCACTCAACGAAGGCGTGCCTCCATCAGTaGCTTCCACGGTCAGGTAATACTCGTGGGAGCTTT +
Preference number: 6 (lower is better)
Translates to: SPHHSTKACLHQ*LPRSGNTRGSF
Trigger: AAAGCTCCCACGAGTATTACCTGACCGTGGAAGCCACTGATGGAGGCACGCCTTCGTTGAGTGATGTGGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp GACCTCTCGACAAAGAGTAAGACGTCCAGATGCGAATaGGGTTCGGAGGGCTGCAGGCTGACGATCTGTATG +
Preference number: 6 (lower is better)
Translates to: DLSTKSKTSRCE*GSEGCRLTICM
Trigger: CATACAGATCGTCAGCCTGCAGCCCTCCGAACCCCATTCGCATCTGGACGTCTTACTCTTTGTCGAGAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp CTCCATTCTGACAGGGGCTGCTGGAGCAGTCTTCTGTaGCGGTCAATAAGCATCCATGAGATAGGTCCACCC +
Preference number: 6 (lower is better)
Translates to: LHSDRGCWSSLL*RSISIHEIGPP
Trigger: GGGTGGACCTATCTCATGGATGCTTATTGACCGCCACAGAAGACTGCTCCAGCAGCCCCTGTCAGAATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp GTGGTTGGCCCCAAACGTTTGTCTTCAGGTTCAGCCTaGCGCTTCTTCTTCCGACTGATCATCTTCCGGCAG +
Preference number: 6 (lower is better)
Translates to: VVGPKRLSSGSA*RFFFRLIIFRQ
Trigger: CTGCCGGAAGATGATCAGTCGGAAGAAGAAGCGCCAGGCTGAACCTGAAGACAAACGTTTGGGGCCAACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp AGACTCGGGGTTGAAGGTGCTGAATTCTGGATGCTCTaGGATCGCGGAGCCTTCGAAGGAATTGCGGTCAAG +
Preference number: 6 (lower is better)
Translates to: RLGVEGAEFWML*DRGAFEGIAVK
Trigger: CTTGACCGCAATTCCTTCGAAGGCTCCGCGATCCCAGAGCATCCAGAATTCAGCACCTTCAACCCCGAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000098796.10
ENSMUST00000186342.3
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp TCCCAGTGGTACCCATTGTCATCACAGGACTCTGACTaGAAGGAGCTAAGCGACTGCACCTCAGACAGGCTC +
Preference number: 6 (lower is better)
Translates to: SQWYPLSSQDSD*KELSDCTSDRL
Trigger: GAGCCTGTCTGAGGTGCAGTCGCTTAGCTCCTTCCAGTCAGAGTCCTGTGATGACAATGGGTACCACTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098796.10
ENSMUST00000191428.7
CDS CCA 72 bp CCGTCGAGGCGTACACGGACATGGGCATGTTTTCTATaGTGGGCGCTTCGAAGTTTCTTTGATACCCTGGGG +
Preference number: 6 (lower is better)
Translates to: PSRRTRTWACFL*WALRSFFDTLG
Trigger: CCCCAGGGTATCAAAGAAACTTCGAAGCGCCCACCATAGAAAACATGCCCATGTCCGTGTACGCCTCGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp ACCGATTCCTCAAACGAAATCGGCTCCGAGGACGGCTaGGGTTTGGAGATCCACTCGATATGGAGCCTGGTG +
Preference number: 6 (lower is better)
Translates to: TDSSNEIGSEDG*GLEIHSIWSLV
Trigger: CACCAGGCTCCATATCGAGTGGATCTCCAAACCCAAGCCGTCCTCGGAGCCGATTTCGTTTGAGGAATCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp CCTTCAGTGATGGAGTACATGACCTGGGAGAATGCCTaGGAGTCAGCGTCTGTGGCGTTCACCGTGATGACG +
Preference number: 6 (lower is better)
Translates to: PSVMEYMTWENA*ESASVAFTVMT
Trigger: CGTCATCACGGTGAACGCCACAGACGCTGACTCCAAGGCATTCTCCCAGGTCATGTACTCCATCACTGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp TGGCAGCGCTGGACCCGATGTTCACCTCGTACTTGGTaGAGCGAAACTGAGGTGCGTTGTCATTGTCGTCTG +
Preference number: 6 (lower is better)
Translates to: WQRWTRCSPRTW*SETEVRCHCRL
Trigger: CAGACGACAATGACAACGCACCTCAGTTTCGCTCAACCAAGTACGAGGTGAACATCGGGTCCAGCGCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp AGCCGCATCCTCACTGACCACGGTGGTGTAGGTGTCTaGGCTGAACACGGGGCTGTTATCGTTGATGTCTGT +
Preference number: 6 (lower is better)
Translates to: SRILTDHGGVGV*AEHGAVIVDVC
Trigger: ACAGACATCAACGATAACAGCCCCGTGTTCAGCCAAGACACCTACACCACCGTGGTCAGTGAGGATGCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp ATAGGTCCACCCACTCTTCGATGTGCGCGTAGGCTCTaGGCTTGTTGTTCAGAGGCAACTCCTGCCCGTTCA +
Preference number: 6 (lower is better)
Translates to: IGPPTLRCARRL*ACCSEATPARS
Trigger: TGAACGGGCAGGAGTTGCCTCTGAACAACAAGCCAAGAGCCTACGCGCACATCGAAGAGTGGGTGGACCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp GGTCTCTGCAAGAAAGCCGTGGTTGGCCCCAAACGTTaGTCTTCAGGTTCAGCCTGGCGCTTCTTCTTCCGA +
Preference number: 6 (lower is better)
Translates to: GLCKKAVVGPKR*SSGSAWRFFFR
Trigger: TCGGAAGAAGAAGCGCCAGGCTGAACCTGAAGACAAACGTTTGGGGCCAACCACGGCTTTCTTGCAGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp AAGAGACGCTGTAGGAGGTGGGGGAGAATAAGGGCCTTAAGTCGTTaGTATCCAGCACTTGTACCCGAACCTTCGCTCGGGCCTCAGCAT +
Preference number: 6 (lower is better)
Translates to: KRRCRRWGRIRALSR*YPALVPEPSLGPQH
Trigger: ATGCTGAGGCCCGAGCGAAGGTTCGGGTACAAGTGCTGGATACAAACGACTTAAGGCCCTTATTCTCCCCCACCTCCTACAGCGTCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp TCGCACTGCAAGTTGACCGGCTTGCGACTGGCAGCCACCGTTAGGTaGATGTATAACGGCGTGGCAAAATTTTCTCCGTCTGTCGCTGTG +
Preference number: 6 (lower is better)
Translates to: SHCKLTGLRLAATVR*MYNGVAKFSPSVAV
Trigger: CACAGCGACAGACGGAGAAAATTTTGCCACGCCGTTATACATCAACCTAACGGTGGCTGCCAGTCGCAAGCCGGTCAACTTGCAGTGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp GCTCGAATCACCAGCGGAACGTTCCTGTCTGTCAGCACCACACTGTaGACGGAGGCTGACTCGCTGATGAATCCTGAATATTCTGCCTGC +
Preference number: 6 (lower is better)
Translates to: ARITSGTFLSVSTTL*TEADSLMNPEYSAC
Trigger: GCAGGCAGAATATTCAGGATTCATCAGCGAGTCAGCCTCCGTCAACAGTGTGGTGCTGACAGACAGGAACGTTCCGCTGGTGATTCGAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp CCAATGTTGCCTTCAGTGATGGAGTACATGACCTGGGAGAATGCCTaGGAGTCAGCGTCTGTGGCGTTCACCGTGATGACGTTCACGCCT +
Preference number: 6 (lower is better)
Translates to: PMLPSVMEYMTWENA*ESASVAFTVMTFTP
Trigger: AGGCGTGAACGTCATCACGGTGAACGCCACAGACGCTGACTCCAAGGCATTCTCCCAGGTCATGTACTCCATCACTGAAGGCAACATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp GTGCTGAATTCTGGATGCTCTGGGATCGCGGAGCCTTCGAAGGAATaGCGGTCAAGGTTGTTTCTCGAGTCGCTTGGAATGCTGGGAGTG +
Preference number: 6 (lower is better)
Translates to: VLNSGCSGIAEPSKE*RSRLFLESLGMLGV
Trigger: CACTCCCAGCATTCCAAGCGACTCGAGAAACAACCTTGACCGCAATTCCTTCGAAGGCTCCGCGATCCCAGAGCATCCAGAATTCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000098796.10
ENSMUST00000186342.3
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp TGTCGGGGAGTCACGAAACTCAGTCTGGCCGTGCTGTaGGTGGACATGACGTTTTCATCCACAGACACCTTC +
Preference number: 6 (lower is better)
Translates to: CRGVTKLSLAVL*VDMTFSSTDTF
Trigger: GAAGGTGTCTGTGGATGAAAACGTCATGTCCACTCACAGCACGGCCAGACTGAGTTTCGTGACTCCCCGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp GCCCATCTTTCTGGGGTGGCCAACATAGGTCTTCGCTaGCGAGTTCTCGTGCACAGTGACATTGTACTGGAA +
Preference number: 6 (lower is better)
Translates to: AHLSGVANIGLR*RVLVHSDIVLE
Trigger: TTCCAGTACAATGTCACTGTGCACGAGAACTCGGCAGCGAAGACCTATGTTGGCCACCCCAGAAAGATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp ATTGGTCCCAATGTCCGCATCCGTGGCACTGACTCTTaGGATGCTGGTCCTTATGGCTGTGTTTTCCGGCAA +
Preference number: 6 (lower is better)
Translates to: IGPNVRIRGTDS*DAGPYGCVFRQ
Trigger: TTGCCGGAAAACACAGCCATAAGGACCAGCATCGCAAGAGTCAGTGCCACGGATGCGGACATTGGGACCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp ATGGTCAAGCTTTTCAGCAGTGTAAAGAGCGCCTGTTaGGGGATCGAGGCGGAATTTCTTGAGGCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: MVKLFSSVKSAC*GIEAEFLEAGW
Trigger: CCAGCCAGCCTCAAGAAATTCCGCCTCGATCCCGCAACAGGCGCTCTTTACACTGCTGAAAAGCTTGACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp AACCCGCCCGTCGTAGGACGGACTGGTGAACCACGGTaGGTGGTCATTCTTGTCACTGACATTGACAACAAT +
Preference number: 6 (lower is better)
Translates to: NPPVVGRTGEPR*VVILVTDIDNN
Trigger: ATTGTTGTCAATGTCAGTGACAAGAATGACCACGCACCGTGGTTCACCAGTCCGTCCTACGACGGGCGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp GTTGCCTTCAGTGATGGAGTACATGACCTGGGAGAATaGCTTGGAGTCAGCGTCTGTGGCGTTCACCGTGAT +
Preference number: 6 (lower is better)
Translates to: VAFSDGVHDLGE*LGVSVCGVHRD
Trigger: ATCACGGTGAACGCCACAGACGCTGACTCCAAGGCATTCTCCCAGGTCATGTACTCCATCACTGAAGGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp AATTGCGGTCAAGGTTGTTTCTCGAGTCGCTTGGAATaGTGGGAGTGTAGGAAATGGGACGGACCGGCACCT +
Preference number: 6 (lower is better)
Translates to: NCGQGCFSSRLE*WECRKWDGPAP
Trigger: AGGTGCCGGTCCGTCCCATTTCCTACACTCCCAGCATTCCAAGCGACTCGAGAAACAACCTTGACCGCAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000098796.10
ENSMUST00000186342.3
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp TGGAGAACAACCGGGGTTCCTCTGTGGCTTGGTCCCTaGCCTCGATCTTTAGGTAATGCACAGGTTGCACTT +
Preference number: 6 (lower is better)
Translates to: WRTTGVPLWLGP*PRSLGNAQVAL
Trigger: AAGTGCAACCTGTGCATTACCTAAAGATCGAGGCCAGGGACCAAGCCACAGAGGAACCCCGGTTGTTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp CCACCACCGTTGTGTTGGTGGACAAACCGGCCATGTTaGTCCCTTGCACTGTCAATGAATACATGGGCAGTG +
Preference number: 6 (lower is better)
Translates to: PPPLCWWTNRPC*SLALSMNTWAV
Trigger: CACTGCCCATGTATTCATTGACAGTGCAAGGGACCAACATGGCCGGTTTGTCCACCAACACAACGGTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp TCCCCAATGTTGCCTTCAGTGATGGAGTACATGACCTaGGAGAATGCCTTGGAGTCAGCGTCTGTGGCGTTC +
Preference number: 6 (lower is better)
Translates to: SPMLPSVMEYMT*ENALESASVAF
Trigger: GAACGCCACAGACGCTGACTCCAAGGCATTCTCCCAGGTCATGTACTCCATCACTGAAGGCAACATTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp AACACTTTCAGCCCTTCTGGGCTGTTGGCTTGGATATaGACCACTGGGCTGTGCATCTGGATGTTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: NTFSPSGLLAWI*TTGLCIWMFSG
Trigger: CCCAGAGAACATCCAGATGCACAGCCCAGTGGTCCATATCCAAGCCAACAGCCCAGAAGGGCTGAAAGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp TCCGTCCGTGATACTGTAGAACACTTTCAGCCCTTCTaGGCTGTTGGCTTGGATATGGACCACTGGGCTGTG +
Preference number: 6 (lower is better)
Translates to: SVRDTVEHFQPF*AVGLDMDHWAV
Trigger: CACAGCCCAGTGGTCCATATCCAAGCCAACAGCCCAGAAGGGCTGAAAGTGTTCTACAGTATCACGGACGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp CTTTGGCAGCGCTGGACCCGATGTTCACCTCGTACTTaGTTGAGCGAAACTGAGGTGCGTTGTCATTGTCGT +
Preference number: 6 (lower is better)
Translates to: LWQRWTRCSPRT*LSETEVRCHCR
Trigger: ACGACAATGACAACGCACCTCAGTTTCGCTCAACCAAGTACGAGGTGAACATCGGGTCCAGCGCTGCCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp GATTCAATCCTGTGTCTGCATCAGTGGCCTGCACTCTaGTCAGCGGTGTCCCAGGCTCTGTGTTCTCGAATA +
Preference number: 6 (lower is better)
Translates to: DSILCLHQWPAL*SAVSQALCSRI
Trigger: TATTCGAGAACACAGAGCCTGGGACACCGCTGACCAGAGTGCAGGCCACTGATGCAGACACAGGATTGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp GACATCGATATTCACCGTGGTTGTGTTGACTCTGGGTaGATTGCCGTTGTCGGCAGCTTGCACCGTGAGTGT +
Preference number: 6 (lower is better)
Translates to: DIDIHRGCVDSG*IAVVGSLHREC
Trigger: ACACTCACGGTGCAAGCTGCCGACAACGGCAATCCACCCAGAGTCAACACAACCACGGTGAATATCGATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp GAAGGAATTGCGGTCAAGGTTGTTTCTCGAGTCGCTTaGAATGCTGGGAGTGTAGGAAATGGGACGGACCGG +
Preference number: 6 (lower is better)
Translates to: EGIAVKVVSRVA*NAGSVGNGTDR
Trigger: CCGGTCCGTCCCATTTCCTACACTCCCAGCATTCCAAGCGACTCGAGAAACAACCTTGACCGCAATTCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000098796.10
ENSMUST00000186342.3
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp CAGTTCATCGGGTGCAGGGAAGTCCTCTGGTGGGGGTaGAAAGTCACTTTCAATGTCATAACCCCCAGGGTA +
Preference number: 6 (lower is better)
Translates to: QFIGCREVLWWG*KVTFNVITPRV
Trigger: TACCCTGGGGGTTATGACATTGAAAGTGACTTTCCACCCCCACCAGAGGACTTCCCTGCACCCGATGAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp TGTAGGAGGTGGGGGAGAATAAGGGCCTTAAGTCGTTaGTATCCAGCACTTGTACCCGAACCTTCGCTCGGG +
Preference number: 6 (lower is better)
Translates to: CRRWGRIRALSR*YPALVPEPSLG
Trigger: CCCGAGCGAAGGTTCGGGTACAAGTGCTGGATACAAACGACTTAAGGCCCTTATTCTCCCCCACCTCCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp TCTGGATGCTCTGGGATCGCGGAGCCTTCGAAGGAATaGCGGTCAAGGTTGTTTCTCGAGTCGCTTGGAATG +
Preference number: 6 (lower is better)
Translates to: SGCSGIAEPSKE*RSRLFLESLGM
Trigger: CATTCCAAGCGACTCGAGAAACAACCTTGACCGCAATTCCTTCGAAGGCTCCGCGATCCCAGAGCATCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000098796.10
ENSMUST00000186342.3
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp GTAGGGTTCTCTACATGGACTGTTCTCGCCAGCGCCTaGTTTCTGAGGTTCGGACATATCGGCGGGGTAGAA +
Preference number: 6 (lower is better)
Translates to: VGFSTWTVLASA*FLRFGHIGGVE
Trigger: TTCTACCCCGCCGATATGTCCGAACCTCAGAAACAAGGCGCTGGCGAGAACAGTCCATGTAGAGAACCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp TTCTCTGCCAACATTTTGGCAACACCGGTCTCCTCGCACTGCAAGTaGACCGGCTTGCGACTGGCAGCCACCGTTAGGTTGATGTATAAC +
Preference number: 6 (lower is better)
Translates to: FSANILATPVSSHCK*TGLRLAATVRLMYN
Trigger: GTTATACATCAACCTAACGGTGGCTGCCAGTCGCAAGCCGGTCAACTTGCAGTGCGAGGAGACCGGTGTTGCCAAAATGTTGGCAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp AATGAGAAAACCGATTCCTCAAACGAAATCGGCTCCGAGGACGGCTaGGGTTTGGAGATCCACTCGATATGGAGCCTGGTGGTGGACGAC +
Preference number: 6 (lower is better)
Translates to: NEKTDSSNEIGSEDG*GLEIHSIWSLVVDD
Trigger: GTCGTCCACCACCAGGCTCCATATCGAGTGGATCTCCAAACCCAAGCCGTCCTCGGAGCCGATTTCGTTTGAGGAATCGGTTTTCTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp CGCTGCGTACTCGGCGAACAGACGAGGAGTCCCCATGTCGTGCACTaGGACGGTGAAGTGAAAAGCATGTGTTTCTTCATAGTCCAGACT +
Preference number: 6 (lower is better)
Translates to: RCVLGEQTRSPHVVH*DGEVKSMCFFIVQT
Trigger: AGTCTGGACTATGAAGAAACACATGCTTTTCACTTCACCGTCCAAGTGCACGACATGGGGACTCCTCGTCTGTTCGCCGAGTACGCAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp GGACGGTCAGCTCATAGCGGCTTCGTAGCTGAGTCGTGTTCTGTATaGCGATGGTGCCAGTCTTGTGGTCCATTGAGAACTTCTCCCCAA +
Preference number: 6 (lower is better)
Translates to: GRSAHSGFVAESCSV*RWCQSCGPLRTSPQ
Trigger: TTGGGGAGAAGTTCTCAATGGACCACAAGACTGGCACCATCGCAATACAGAACACGACTCAGCTACGAAGCCGCTATGAGCTGACCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp GCGTTGTCATTGACATCGGAGACATCGATATTCACCGTGGTTGTGTaGACTCTGGGTGGATTGCCGTTGTCGGCAGCTTGCACCGTGAGT +
Preference number: 6 (lower is better)
Translates to: ALSLTSETSIFTVVV*TLGGLPLSAACTVS
Trigger: ACTCACGGTGCAAGCTGCCGACAACGGCAATCCACCCAGAGTCAACACAACCACGGTGAATATCGATGTCTCCGATGTCAATGACAACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp ATTCGCCATTGGTCCCAATGTCCGCATCCGTGGCACTaGCTCTTGCGATGCTGGTCCTTATGGCTGTGTTTT +
Preference number: 6 (lower is better)
Translates to: IRHWSQCPHPWH*LLRCWSLWLCF
Trigger: AAAACACAGCCATAAGGACCAGCATCGCAAGAGTCAGTGCCACGGATGCGGACATTGGGACCAATGGCGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp ATGCCAGGGGGCTCAACTGAGATCACGCCGATCATGTaGGCCACCGGATCACTTTCCATTACGGTAAATGAG +
Preference number: 6 (lower is better)
Translates to: MPGGSTEITPIM*ATGSLSITVNE
Trigger: CTCATTTACCGTAATGGAAAGTGATCCGGTGGCTCACATGATCGGCGTGATCTCAGTTGAGCCCCCTGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp TGTCCACATCAAAGTGGCTGTCATAGTTGCCACCGATaGTGTCAAACCACAGAGGCATGCCAGGGGGCTCAA +
Preference number: 6 (lower is better)
Translates to: CPHQSGCHSCHR*CQTTEACQGAQ
Trigger: TTGAGCCCCCTGGCATGCCTCTGTGGTTTGACATCATCGGTGGCAACTATGACAGCCACTTTGATGTGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
CDS TCA 72 bp CTCTTGATCGTCGCCGCTGTCAGGAGGACCCCATGCTaGTTCACCTCAAAGGCGTTTTCATCATTTCCACTC +
Preference number: 6 (lower is better)
Translates to: LLIVAAVRRTPC*FTSKAFSSFPL
Trigger: GAGTGGAAATGATGAAAACGCCTTTGAGGTGAATCAGCATGGGGTCCTCCTGACAGCGGCGACGATCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp GGAACACCGTTGTCTGTCACAGTAACTTCTAGAATGTaGTCGTCCTGCTGTTCTCGGTCCAGCTTCCTCGAC +
Preference number: 6 (lower is better)
Translates to: GTPLSVTVTSRM*SSCCSRSSFLD
Trigger: GTCGAGGAAGCTGGACCGAGAACAGCAGGACGAGCACATTCTAGAAGTTACTGTGACAGACAACGGTGTTCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp AGTTACGTGGCTGTAAATGCCAGAATCTCTGTCAGATaGCTTCACTTGGACCACCAGGGTGTGCAAGGGAGC +
Preference number: 6 (lower is better)
Translates to: SYVAVNARISVR*LHLDHQGVQGS
Trigger: GCTCCCTTGCACACCCTGGTGGTCCAAGTGAAGGCATCTGACAGAGATTCTGGCATTTACAGCCACGTAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp ACTAGGAATGGCTTTGACCAGGACCACGGGTGTATGTaGAGGGGCAAACTCACTGATCTCGGCTCTGTAAAC +
Preference number: 6 (lower is better)
Translates to: TRNGFDQDHGCM*RGKLTDLGSVN
Trigger: GTTTACAGAGCCGAGATCAGTGAGTTTGCCCCTCCACATACACCCGTGGTCCTGGTCAAAGCCATTCCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp CGGTGGTCATTGGTATCTATTACTTTGATGAGGACCTaGGTGAGGATCGTGGTGGTCCCATCTGTTGCCTCC +
Preference number: 6 (lower is better)
Translates to: RWSLVSITLMRT*VRIVVVPSVAS
Trigger: GGAGGCAACAGATGGGACCACCACGATCCTCACCCAGGTCCTCATCAAAGTAATAGATACCAATGACCACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp AGCGGCTTCGTAGCTGAGTCGTGTTCTGTATTGCGATaGTGCCAGTCTTGTGGTCCATTGAGAACTTCTCCC +
Preference number: 6 (lower is better)
Translates to: SGFVAESCSVLR*CQSCGPLRTSP
Trigger: GGGAGAAGTTCTCAATGGACCACAAGACTGGCACCATCGCAATACAGAACACGACTCAGCTACGAAGCCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp TTCTATGGTGGGCGCTTCGAAGTTTCTTTGATACCCTaGGGGGTAGGGGGTGTAGGGTTCTCTACATGGACT +
Preference number: 6 (lower is better)
Translates to: FYGGRFEVSLIP*GVGGVGFSTWT
Trigger: AGTCCATGTAGAGAACCCTACACCCCCTACCCCCCAGGGTATCAAAGAAACTTCGAAGCGCCCACCATAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp ATCCAAATGGGAGCATTGTCATCACAGGACTCTGACTaGAAGGAGCTAAGCGACTGCACCTCAGACAGGCTC +
Preference number: 6 (lower is better)
Translates to: IQMGALSSQDSD*KELSDCTSDRL
Trigger: GAGCCTGTCTGAGGTGCAGTCGCTTAGCTCCTTCCAGTCAGAGTCCTGTGATGACAATGCTCCCATTTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186342.3
CDS CCA 72 bp GTCACTATGGAAGCATTGTCATCACAGGACTCTGACTaGAAGGAGCTAAGCGACTGCACCTCAGACAGGCTC +
Preference number: 6 (lower is better)
Translates to: VTMEALSSQDSD*KELSDCTSDRL
Trigger: GAGCCTGTCTGAGGTGCAGTCGCTTAGCTCCTTCCAGTCAGAGTCCTGTGATGACAATGCTTCCATAGTGAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215588.2
CDS CAA 72 bp CTTCTCCGTGATCCAGGAGGCTGTATCTCACCTGACTaGACTGACCCACATCGGGATCATAGGCTTCTAACC +
Preference number: 6 (lower is better)
Translates to: LLRDPGGCISPD*TDPHRDHRLLT
Trigger: GGTTAGAAGCCTATGATCCCGATGTGGGTCAGTCAAGTCAGGTGAGATACAGCCTCCTGGATCACGGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp ACCACCACCGTTGTGTTGGTGGACAAACCGGCCATGTaGGTCCCTTGCACTGTCAATGAATACATGGGCAGT +
Preference number: 6 (lower is better)
Translates to: TTTVVLVDKPAM*VPCTVNEYMGS
Trigger: ACTGCCCATGTATTCATTGACAGTGCAAGGGACCAACATGGCCGGTTTGTCCACCAACACAACGGTGGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp ACCAGCGGAACGTTCCTGTCTGTCAGCACCACACTGTaGACGGAGGCTGACTCGCTGATGAATCCTGAATAT +
Preference number: 6 (lower is better)
Translates to: TSGTFLSVSTTL*TEADSLMNPEY
Trigger: ATATTCAGGATTCATCAGCGAGTCAGCCTCCGTCAACAGTGTGGTGCTGACAGACAGGAACGTTCCGCTGGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp CGTGGAGTTCTCTTTCACAACTGCGGAGTAGGCGTCTaGGGTAAACTTGAGGGGACTCTCTCTGCTCTCCTT +
Preference number: 6 (lower is better)
Translates to: RGVLFHNCGVGV*GKLEGTLSALL
Trigger: AAGGAGAGCAGAGAGAGTCCCCTCAAGTTTACCCAAGACGCCTACTCCGCAGTTGTGAAAGAGAACTCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp TTGACATCGGAGACATCGATATTCACCGTGGTTGTGTaGACTCTGGGTGGATTGCCGTTGTCGGCAGCTTGC +
Preference number: 6 (lower is better)
Translates to: LTSETSIFTVVV*TLGGLPLSAAC
Trigger: GCAAGCTGCCGACAACGGCAATCCACCCAGAGTCAACACAACCACGGTGAATATCGATGTCTCCGATGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp GTACTGGAAGTGTGTAAACTGGATAGGAGGGGTGGGTTCAAGTCTTaGGCTGCCATCACTGTCTCCAAACTGCTGGAGGAAGAGGAGCAG +
Preference number: 6 (lower is better)
Translates to: VLEVCKLDRRGGFKS*AAITVSKLLEEEEQ
Trigger: CTGCTCCTCTTCCTCCAGCAGTTTGGAGACAGTGATGGCAGCCAAAGACTTGAACCCACCCCTCCTATCCAGTTTACACACTTCCAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp CGCACGTGCACCACCACCGTTGTGTTGGTGGACAAACCGGCCATGTaGGTCCCTTGCACTGTCAATGAATACATGGGCAGTGTTTCAAAA +
Preference number: 6 (lower is better)
Translates to: RTCTTTVVLVDKPAM*VPCTVNEYMGSVSK
Trigger: TTTTGAAACACTGCCCATGTATTCATTGACAGTGCAAGGGACCAACATGGCCGGTTTGTCCACCAACACAACGGTGGTGGTGCACGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp GGTGGGGTCAATAGCAAAATAGTTGTGCACGGACGGCTCAACGATTaGATAGACGAGCAGAGCATTGGATTCCCTGTCAGCATCCGTCGC +
Preference number: 6 (lower is better)
Translates to: GGVNSKIVVHGRLND*IDEQSIGFPVSIRR
Trigger: GCGACGGATGCTGACAGGGAATCCAATGCTCTGCTCGTCTATCAAATCGTTGAGCCGTCCGTGCACAACTATTTTGCTATTGACCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp GCGATGGTGCCAGTCTTGTGGTCCATTGAGAACTTCTCCCCAATGTaGCCTTCAGTGATGGAGTACATGACCTGGGAGAATGCCTTGGAG +
Preference number: 6 (lower is better)
Translates to: AMVPVLWSIENFSPM*PSVMEYMTWENALE
Trigger: CTCCAAGGCATTCTCCCAGGTCATGTACTCCATCACTGAAGGCAACATTGGGGAGAAGTTCTCAATGGACCACAAGACTGGCACCATCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp GTCCGTGATACTGTAGAACACTTTCAGCCCTTCTGGGCTGTTGGCTaGGATATGGACCACTGGGCTGTGCATCTGGATGTTCTCTGGGAT +
Preference number: 6 (lower is better)
Translates to: VRDTVEHFQPFWAVG*DMDHWAVHLDVLWD
Trigger: ATCCCAGAGAACATCCAGATGCACAGCCCAGTGGTCCATATCCAAGCCAACAGCCCAGAAGGGCTGAAAGTGTTCTACAGTATCACGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp GTGATGTCGGCCACCGTGGTGAATTTCCCATCTGTCACGCTGACATaGAGAAGGTACTGGCCTATGTCCAGCTTTCTGTGTGCAATCAGC +
Preference number: 6 (lower is better)
Translates to: VMSATVVNFPSVTLT*RRYWPMSSFLCAIS
Trigger: GCTGATTGCACACAGAAAGCTGGACATAGGCCAGTACCTTCTCAATGTCAGCGTGACAGATGGGAAATTCACCACGGTGGCCGACATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp TTCGATGTAGAAAACTGGGGGCGGTGGTCATTGGTATCTATTACTTaGATGAGGACCTGGGTGAGGATCGTGGTGGTCCCATCTGTTGCC +
Preference number: 6 (lower is better)
Translates to: FDVENWGRWSLVSIT*MRTWVRIVVVPSVA
Trigger: GGCAACAGATGGGACCACCACGATCCTCACCCAGGTCCTCATCAAAGTAATAGATACCAATGACCACCGCCCCCAGTTTTCTACATCGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp TCTGGCTTCCGTGGAGTTCTCTTTCACAACTGCGGAGTAGGCGTCTaGGGTAAACTTGAGGGGACTCTCTCTGCTCTCCTTTACGTTGAT +
Preference number: 6 (lower is better)
Translates to: SGFRGVLFHNCGVGV*GKLEGTLSALLYVD
Trigger: ATCAACGTAAAGGAGAGCAGAGAGAGTCCCCTCAAGTTTACCCAAGACGCCTACTCCGCAGTTGTGAAAGAGAACTCCACGGAAGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp TGTCCCAAGGCATCCCCTCCTGTGATGAAGTATGACACCTGTCTGTaGATCTCTTCAGTGTCAGCATCGGTCGTGCTTAAGATGGCGATC +
Preference number: 6 (lower is better)
Translates to: CPKASPPVMKYDTCL*ISSVSASVVLKMAI
Trigger: GATCGCCATCTTAAGCACGACCGATGCTGACACTGAAGAGATCAACAGACAGGTGTCATACTTCATCACAGGAGGGGATGCCTTGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp CACACATCACGAAATGCCCGTGTGCGGCGTGCTCGCTaGTTCTGGCTTCATAAACCTGTTGTTCAAACAGAG +
Preference number: 6 (lower is better)
Translates to: HTSRNARVRRAR*FWLHKPVVQTE
Trigger: CTCTGTTTGAACAACAGGTTTATGAAGCCAGAATCAGCGAGCACGCCGCACACGGGCATTTCGTGATGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp GGATGTAAAGAACAGCCCCGCCATGTTCTACCCGGATaGGGTCAATTTCTGTTCCAATGGGCGTGTCTTCTG +
Preference number: 6 (lower is better)
Translates to: GCKEQPRHVLPG*GQFLFQWACLL
Trigger: CAGAAGACACGCCCATTGGAACAGAAATTGACCTCATCCGGGTAGAACATGGCGGGGCTGTTCTTTACATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp TTCCTCGATCACCCTGATGTCAATGTGTGTCATGGATaGCAGCTGAGGCTTTCCGCTGTCAGCCACCTTAAC +
Preference number: 6 (lower is better)
Translates to: FLDHPDVNVCHG*QLRLSAVSHLN
Trigger: GTTAAGGTGGCTGACAGCGGAAAGCCTCAGCTGTCATCCATGACACACATTGACATCAGGGTGATCGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp TGTACCTTATCTCCCACGAGGGGTCTAAGATGTAGATaGCCATCTTTCTGGGGTGGCCAACATAGGTCTTCG +
Preference number: 6 (lower is better)
Translates to: CTLSPTRGLRCR*PSFWGGQHRSS
Trigger: CGAAGACCTATGTTGGCCACCCCAGAAAGATGGGCATCTACATCTTAGACCCCTCGTGGGAGATAAGGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp GTCCCAGTCGACGGCCCCGACGGCTTTCACTTTGAATaGTTTACTCCCTGGGAAAGACCTCACTGTTTTAAA +
Preference number: 6 (lower is better)
Translates to: VPVDGPDGFHFE*FTPWERPHCFK
Trigger: TTTAAAACAGTGAGGTCTTTCCCAGGGAGTAAAGCATTCAAAGTGAAAGCCGTCGGGGCCGTCGACTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp TTGTCTGTCACAGTAACTTCTAGAATGTGCTCGTCCTaGTGTTCTCGGTCCAGCTTCCTCGACGTGGTTGTG +
Preference number: 6 (lower is better)
Translates to: LSVTVTSRMCSS*CSRSSFLDVVV
Trigger: CACAACCACGTCGAGGAAGCTGGACCGAGAACAGCAGGACGAGCACATTCTAGAAGTTACTGTGACAGACAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp GGCTTCGTAGCTGAGTCGTGTTCTGTATTGCGATGGTaGCAGTCTTGTGGTCCATTGAGAACTTCTCCCCAA +
Preference number: 6 (lower is better)
Translates to: GFVAESCSVLRW*QSCGPLRTSPQ
Trigger: TTGGGGAGAAGTTCTCAATGGACCACAAGACTGGCACCATCGCAATACAGAACACGACTCAGCTACGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp TTCGCTGCCGAGTTCTCGTGCACAGTGACATTGTACTaGAAGTGTGTAAACTGGATAGGAGGGGTGGGTTCA +
Preference number: 6 (lower is better)
Translates to: FAAEFSCTVTLY*KCVNWIGGVGS
Trigger: TGAACCCACCCCTCCTATCCAGTTTACACACTTCCAGTACAATGTCACTGTGCACGAGAACTCGGCAGCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp TGGCTGTGTTTTCCGGCAAAGAGACGCTGTAGGAGGTaGGGGAGAATAAGGGCCTTAAGTCGTTTGTATCCA +
Preference number: 6 (lower is better)
Translates to: WLCFPAKRRCRR*GRIRALSRLYP
Trigger: TGGATACAAACGACTTAAGGCCCTTATTCTCCCCCACCTCCTACAGCGTCTCTTTGCCGGAAAACACAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp GTGATGAAAATCTCCAGCGGCAAGATGGCAGGAGGGTaGATGCTTTCCTCGATCACCCTGATGTCAATGTGT +
Preference number: 6 (lower is better)
Translates to: VMKISSGKMAGG*MLSSITLMSMC
Trigger: ACACATTGACATCAGGGTGATCGAGGAAAGCATCCACCCTCCTGCCATCTTGCCGCTGGAGATTTTCATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp GTGTGTAAACTGGATAGGAGGGGTGGGTTCAAGTCTTaGGCTGCCATCACTGTCTCCAAACTGCTGGAGGAA +
Preference number: 6 (lower is better)
Translates to: VCKLDRRGGFKS*AAITVSKLLEE
Trigger: TTCCTCCAGCAGTTTGGAGACAGTGATGGCAGCCAAAGACTTGAACCCACCCCTCCTATCCAGTTTACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp AAGTTGACCGGCTTGCGACTGGCAGCCACCGTTAGGTaGATGTATAACGGCGTGGCAAAATTTTCTCCGTCT +
Preference number: 6 (lower is better)
Translates to: KLTGLRLAATVR*MYNGVAKFSPS
Trigger: AGACGGAGAAAATTTTGCCACGCCGTTATACATCAACCTAACGGTGGCTGCCAGTCGCAAGCCGGTCAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp AACTTATTCGCCTGCAGGAGTTTCTCTGCCAACATTTaGGCAACACCGGTCTCCTCGCACTGCAAGTTGACC +
Preference number: 6 (lower is better)
Translates to: NLFACRSFSANI*ATPVSSHCKLT
Trigger: GGTCAACTTGCAGTGCGAGGAGACCGGTGTTGCCAAAATGTTGGCAGAGAAACTCCTGCAGGCGAATAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp TCACAGTTTATCCTCTCAAACAGGGGTGTGTTGTCATTCAGGTTATaGAGAGTAATCGTGGCGAGGACTTCGACTTCCCGGCGGTATGGC +
Preference number: 6 (lower is better)
Translates to: SQFILSNRGVLSFRL*RVIVARTSTSRRYG
Trigger: GCCATACCGCCGGGAAGTCGAAGTCCTCGCCACGATTACTCTCAATAACCTGAATGACAACACACCCCTGTTTGAGAGGATAAACTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp ACAGACGAGGAGTCCCCATGTCGTGCACTTGGACGGTaGAGTGAAAAGCATGTGTTTCTTCATAGTCCAGAC +
Preference number: 6 (lower is better)
Translates to: TDEESPCRALGR*SEKHVFLHSPD
Trigger: GTCTGGACTATGAAGAAACACATGCTTTTCACTTCACCGTCCAAGTGCACGACATGGGGACTCCTCGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp ATCACCCTGATGTCAATGTGTGTCATGGATGACAGCTaGGGCTTTCCGCTGTCAGCCACCTTAACATGCAGA +
Preference number: 6 (lower is better)
Translates to: ITLMSMCVMDDS*GFPLSATLTCR
Trigger: TCTGCATGTTAAGGTGGCTGACAGCGGAAAGCCTCAGCTGTCATCCATGACACACATTGACATCAGGGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp TCACGAAACTCAGTCTGGCCGTGCTGTGAGTGGACATaGCGTTTTCATCCACAGACACCTTCTCATCACAGA +
Preference number: 6 (lower is better)
Translates to: SRNSVWPCCEWT*RFHPQTPSHHR
Trigger: TCTGTGATGAGAAGGTGTCTGTGGATGAAAACGTCATGTCCACTCACAGCACGGCCAGACTGAGTTTCGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp TTGTATGTCTGGCAGAGGGACACTTGGCATCCAGTCTaGTGTATCCCAGTGGTACCCATTGTCATCACAGGA +
Preference number: 6 (lower is better)
Translates to: LYVWQRDTWHPV*CIPVVPIVITG
Trigger: TCCTGTGATGACAATGGGTACCACTGGGATACATCAGACTGGATGCCAAGTGTCCCTCTGCCAGACATACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098796.10
ENSMUST00000191428.7
CDS GCA 72 bp GGCTCGAACTTGAAGGACAGGTGTTCCAATTACAGATaGTTCAGACAGGGTTGTGGAGTAAGATGGCTGCAC +
Preference number: 6 (lower is better)
Translates to: GSNLKDRCSNYR*FRQGCGVRWLH
Trigger: GTGCAGCCATCTTACTCCACAACCCTGTCTGAAGCATCTGTAATTGGAACACCTGTCCTTCAAGTTCGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp ATGGCAAAAGATTCGATGATGTCTGCGTCTTGGGATTaGTCTAGGCTGTACATGACTTGGCCGTTGGCTCCT +
Preference number: 6 (lower is better)
Translates to: MAKDSMMSASWD*SRLYMTWPLAP
Trigger: AGGAGCCAACGGCCAAGTCATGTACAGCCTAGACCAATCCCAAGACGCAGACATCATCGAATCTTTTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp AGACACAACCACCGTGCCAGTAGCTGTCAATCTCCTTaGCAATCCTTGGTCCACTGCTTTCAAAGTGAGAGT +
Preference number: 6 (lower is better)
Translates to: RHNHRASSCQSP*QSLVHCFQSES
Trigger: ACTCTCACTTTGAAAGCAGTGGACCAAGGATTGCCAAGGAGATTGACAGCTACTGGCACGGTGGTTGTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp ATAACCCCCAGGGTAATAGTCAGTATCGATGGCGTTTaGATCAGCCGAGTAGAGGGGTGTGTGTTCGTCAAT +
Preference number: 6 (lower is better)
Translates to: ITPRVIVSIDGV*ISRVEGCVFVN
Trigger: ATTGACGAACACACACCCCTCTACTCGGCTGATCCAAACGCCATCGATACTGACTATTACCCTGGGGGTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp CAATGTCATAACCCCCAGGGTAATAGTCAGTATCGATaGCGTTTGGATCAGCCGAGTAGAGGGGTGTGTGTT +
Preference number: 6 (lower is better)
Translates to: QCHNPQGNSQYR*RLDQPSRGVCV
Trigger: AACACACACCCCTCTACTCGGCTGATCCAAACGCCATCGATACTGACTATTACCCTGGGGGTTATGACATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp GGACAGGTGTTCCAATTACAGATGCTTCAGACAGGGTaGTGGAGTAAGATGGCTGCACAAACACAGGAGGGT +
Preference number: 6 (lower is better)
Translates to: GQVFQLQMLQTG*WSKMAAQTQEG
Trigger: ACCCTCCTGTGTTTGTGCAGCCATCTTACTCCACAACCCTGTCTGAAGCATCTGTAATTGGAACACCTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp CACCGTGCCAGTAGCTGTCAATCTCCTTGGCAATCCTaGGTCCACTGCTTTCAAAGTGAGAGTATAGACTGC +
Preference number: 6 (lower is better)
Translates to: HRASSCQSPWQS*VHCFQSESIDC
Trigger: GCAGTCTATACTCTCACTTTGAAAGCAGTGGACCAAGGATTGCCAAGGAGATTGACAGCTACTGGCACGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp AATTGGGGAACTCTTGTATGTCTGGCAGAGGGACACTaGGCATCCAGTCTGATGTATCCCAGTGGTACCCAT +
Preference number: 6 (lower is better)
Translates to: NWGTLVCLAEGH*ASSLMYPSGTH
Trigger: ATGGGTACCACTGGGATACATCAGACTGGATGCCAAGTGTCCCTCTGCCAGACATACAAGAGTTCCCCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098796.10
ENSMUST00000191428.7
CDS CAA 90 bp CTGTTTGTACCTAAAACTTTGACCACCACTCGGGCGGAGGCTCTTTaGTCACTTGTTGTCACCTCGAGTTCAAAATGGGATGTGTGCTGC +
Preference number: 6 (lower is better)
Translates to: LFVPKTLTTTRAEAL*SLVVTSSSKWDVCC
Trigger: GCAGCACACATCCCATTTTGAACTCGAGGTGACAACAAGTGACAAAAGAGCCTCCGCCCGAGTGGTGGTCAAAGTTTTAGGTACAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp GAGGTCTTCTCACAGACTGGACTGTTGTCGTTGGCATCGAGAACTTaGACTTCAACTCTAGCTTTGGAAGAGAAGGTCCCGTCTGTTGCT +
Preference number: 6 (lower is better)
Translates to: EVFSQTGLLSLASRT*TSTLALEEKVPSVA
Trigger: AGCAACAGACGGGACCTTCTCTTCCAAAGCTAGAGTTGAAGTCAAAGTTCTCGATGCCAACGACAACAGTCCAGTCTGTGAGAAGACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp AAATTTTCTCCGTCTGTCGCTGTGATTCTCAAACTGTaGAAGGAAACCTTTGCGCCCAAGCCATCCGTGAGG +
Preference number: 6 (lower is better)
Translates to: KFSPSVAVILKL*KETFAPKPSVR
Trigger: CCTCACGGATGGCTTGGGCGCAAAGGTTTCCTTTCACAGTTTGAGAATCACAGCGACAGACGGAGAAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp TGGGGCCCAGATCTTTATCAGTGGCTTCGACCTGGATaGTTTCACTGTTCACCTCCTTGTCTTCACTCACTT +
Preference number: 6 (lower is better)
Translates to: WGPDLYQWLRPG*FHCSPPCLHSL
Trigger: AAGTGAGTGAAGACAAGGAGGTGAACAGTGAAATCATCCAGGTCGAAGCCACTGATAAAGATCTGGGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp GTTCTGTATTGCGATGGTGCCAGTCTTGTGGTCCATTaGGAACTTCTCCCCAATGTTGCCTTCAGTGATGGA +
Preference number: 6 (lower is better)
Translates to: VLYCDGASLVVH*ELLPNVAFSDG
Trigger: TCCATCACTGAAGGCAACATTGGGGAGAAGTTCTCAATGGACCACAAGACTGGCACCATCGCAATACAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp AAACTGTCCCAAGGCATCCCCTCCTGTGATGAAGTATaGCACCTGTCTGTTGATCTCTTCAGTGTCAGCATC +
Preference number: 6 (lower is better)
Translates to: KLSQGIPSCDEV*HLSVDLFSVSI
Trigger: GATGCTGACACTGAAGAGATCAACAGACAGGTGTCATACTTCATCACAGGAGGGGATGCCTTGGGACAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp GTTCCCCTCTATAATGGAGTAGTGGATGTGGCTGTTTaGGGGGCCATCAGCATCGTCAGCCATAATCGTAAT +
Preference number: 6 (lower is better)
Translates to: VPLYNGVVDVAV*GAISIVSHNRN
Trigger: ATTACGATTATGGCTGACGATGCTGATGGCCCCTCAAACAGCCACATCCACTACTCCATTATAGAGGGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp ATCGATGTCACTCTGACATCTTTCTCCCCTAAAGCCTaGGTCACACTGACAGACAGCACCATCCAAACTGTC +
Preference number: 6 (lower is better)
Translates to: IDVTLTSFSPKA*VTLTDSTIQTV
Trigger: GACAGTTTGGATGGTGCTGTCTGTCAGTGTGACTCAGGCTTTAGGGGAGAAAGATGTCAGAGTGACATCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp CCTAAAACTTTGACCACCACTCGGGCGGAGGCTCTTTaGTCACTTGTTGTCACCTCGAGTTCAAAATGGGAT +
Preference number: 6 (lower is better)
Translates to: PKTLTTTRAEAL*SLVVTSSSKWD
Trigger: ATCCCATTTTGAACTCGAGGTGACAACAAGTGACAAAAGAGCCTCCGCCCGAGTGGTGGTCAAAGTTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp GTCCCCTCACAGTTTATCCTCTCAAACAGGGGTGTGTaGTCATTCAGGTTATTGAGAGTAATCGTGGCGAGG +
Preference number: 6 (lower is better)
Translates to: VPSQFILSNRGV*SFRLLRVIVAR
Trigger: CCTCGCCACGATTACTCTCAATAACCTGAATGACAACACACCCCTGTTTGAGAGGATAAACTGTGAGGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp CCAGTCTTGTGGTCCATTGAGAACTTCTCCCCAATGTaGCCTTCAGTGATGGAGTACATGACCTGGGAGAAT +
Preference number: 6 (lower is better)
Translates to: PVLWSIENFSPM*PSVMEYMTWEN
Trigger: ATTCTCCCAGGTCATGTACTCCATCACTGAAGGCAACATTGGGGAGAAGTTCTCAATGGACCACAAGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp TCACAGACTGGACTGTTGTCGTTGGCATCGAGAACTTaGACTTCAACTCTAGCTTTGGAAGAGAAGGTCCCG +
Preference number: 6 (lower is better)
Translates to: SQTGLLSLASRT*TSTLALEEKVP
Trigger: CGGGACCTTCTCTTCCAAAGCTAGAGTTGAAGTCAAAGTTCTCGATGCCAACGACAACAGTCCAGTCTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp CCATTGAAGCCAGAGTCAAGGTCAGTAGCATTCATGAAGAGTATATaGGCACCCACCGGGAGGTTCTCCTTTACCTCAATTCCAGTTGGA +
Preference number: 6 (lower is better)
Translates to: PLKPESRSVAFMKSI*APTGRFSFTSIPVG
Trigger: TCCAACTGGAATTGAGGTAAAGGAGAACCTCCCGGTGGGTGCCAATATACTCTTCATGAATGCTACTGACCTTGACTCTGGCTTCAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp CTCTGGGGTATACCGAGGTCGTACACGGTAATATTCAGGGTGTATTaGTCCATTACTTCACGGTCAAGTGGAGACAGGACTTTCAGCACT +
Preference number: 6 (lower is better)
Translates to: LWGIPRSYTVIFRVY*SITSRSSGDRTFST
Trigger: AGTGCTGAAAGTCCTGTCTCCACTTGACCGTGAAGTAATGGACAAATACACCCTGAATATTACCGTGTACGACCTCGGTATACCCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp ACAGCAACTTCGTATTTCGATGTAGAAAACTGGGGGCGGTGGTCATaGGTATCTATTACTTTGATGAGGACCTGGGTGAGGATCGTGGTG +
Preference number: 6 (lower is better)
Translates to: TATSYFDVENWGRWS*VSITLMRTWVRIVV
Trigger: CACCACGATCCTCACCCAGGTCCTCATCAAAGTAATAGATACCAATGACCACCGCCCCCAGTTTTCTACATCGAAATACGAAGTTGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp AAACTTCCAATCCTGATGGCTTCACTAATCTCCGCAGAGTACTCTTaGGATGTGAACTTGGGAGAGGCATTGTCAGCAACAGTGACAGCG +
Preference number: 6 (lower is better)
Translates to: KLPILMASLISAEYS*DVNLGEALSATVTA
Trigger: CGCTGTCACTGTTGCTGACAATGCCTCTCCCAAGTTCACATCCAAAGAGTACTCTGCGGAGATTAGTGAAGCCATCAGGATTGGAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp ATGGGAACCAGAACTTCTGCAGAGAAAGCTGGACTCCCTCCGTCCTaGGCGACCACTGTGACAAGGTATTCTTTATTTAAAGTGTCATGC +
Preference number: 6 (lower is better)
Translates to: MGTRTSAEKAGLPPS*ATTVTRYSLFKVSC
Trigger: GCATGACACTTTAAATAAAGAATACCTTGTCACAGTGGTCGCCAAGGACGGAGGGAGTCCAGCTTTCTCTGCAGAAGTTCTGGTTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp GGAAATTCCTCTGTTTGGTTCCGAGTCGGAATCTGTGGCTCGAACTaGAAGGACAGGTGTTCCAATTACAGATGCTTCAGACAGGGTTGT +
Preference number: 6 (lower is better)
Translates to: GNSSVWFRVGICGSN*KDRCSNYRCFRQGC
Trigger: ACAACCCTGTCTGAAGCATCTGTAATTGGAACACCTGTCCTTCAAGTTCGAGCCACAGATTCCGACTCGGAACCAAACAGAGGAATTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp ATAACGGCGTGGCAAAATTTTCTCCGTCTGTCGCTGTaGTTCTCAAACTGTGAAAGGAAACCTTTGCGCCCA +
Preference number: 6 (lower is better)
Translates to: ITAWQNFLRLSL*FSNCERKPLRP
Trigger: TGGGCGCAAAGGTTTCCTTTCACAGTTTGAGAATCACAGCGACAGACGGAGAAAATTTTGCCACGCCGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp CATGTGAGCCACCGGATCACTTTCCATTACGGTAAATaGGAAAACCGATTCCTCAAACGAAATCGGCTCCGA +
Preference number: 6 (lower is better)
Translates to: HVSHRITFHYGK*ENRFLKRNRLR
Trigger: TCGGAGCCGATTTCGTTTGAGGAATCGGTTTTCTCATTTACCGTAATGGAAAGTGATCCGGTGGCTCACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp GTTGTGTTGGTGGACAAACCGGCCATGTTGGTCCCTTaGACTGTCAATGAATACATGGGCAGTGTTTCAAAA +
Preference number: 6 (lower is better)
Translates to: VVLVDKPAMLVP*TVNEYMGSVSK
Trigger: TTTTGAAACACTGCCCATGTATTCATTGACAGTGCAAGGGACCAACATGGCCGGTTTGTCCACCAACACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp ATTCAGGGTGTATTTGTCCATTACTTCACGGTCAAGTaGAGACAGGACTTTCAGCACTCCCGTTTCCATGTC +
Preference number: 6 (lower is better)
Translates to: IQGVFVHYFTVK*RQDFQHSRFHV
Trigger: GACATGGAAACGGGAGTGCTGAAAGTCCTGTCTCCACTTGACCGTGAAGTAATGGACAAATACACCCTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp CAGGTGTTCCAATTACAGATGCTTCAGACAGGGTTGTaGAGTAAGATGGCTGCACAAACACAGGAGGGTTAT +
Preference number: 6 (lower is better)
Translates to: QVFQLQMLQTGL*SKMAAQTQEGY
Trigger: ATAACCCTCCTGTGTTTGTGCAGCCATCTTACTCCACAACCCTGTCTGAAGCATCTGTAATTGGAACACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp AGGAAATTCCTCTGTTTGGTTCCGAGTCGGAATCTGTaGCTCGAACTTGAAGGACAGGTGTTCCAATTACAG +
Preference number: 6 (lower is better)
Translates to: RKFLCLVPSRNL*LELEGQVFQLQ
Trigger: CTGTAATTGGAACACCTGTCCTTCAAGTTCGAGCCACAGATTCCGACTCGGAACCAAACAGAGGAATTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp GTGATTTCCAATCAGCTGGTAGGAAATTCCTCTGTTTaGTTCCGAGTCGGAATCTGTGGCTCGAACTTGAAG +
Preference number: 6 (lower is better)
Translates to: VISNQLVGNSSV*FRVGICGSNLK
Trigger: CTTCAAGTTCGAGCCACAGATTCCGACTCGGAACCAAACAGAGGAATTTCCTACCAGCTGATTGGAAATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp AATTTCCCATCTGTCACGCTGACATTGAGAAGGTACTaGCCTATGTCCAGCTTTCTGTGTGCAATCAGCTTG +
Preference number: 6 (lower is better)
Translates to: NFPSVTLTLRRY*PMSSFLCAISL
Trigger: CAAGCTGATTGCACACAGAAAGCTGGACATAGGCCAGTACCTTCTCAATGTCAGCGTGACAGATGGGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp CCAGAGTCAAGGTCAGTAGCATTCATGAAGAGTATATaGGCACCCACCGGGAGGTTCTCCTTTACCTCAATT +
Preference number: 6 (lower is better)
Translates to: PESRSVAFMKSI*APTGRFSFTSI
Trigger: AATTGAGGTAAAGGAGAACCTCCCGGTGGGTGCCAATATACTCTTCATGAATGCTACTGACCTTGACTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp GGGTTCCCGCTTGTAATTCTGTATGTCAGTTTGTCATaGGAGCTAGAATCCGGGTCAAAAGCCTCAATCTGG +
Preference number: 6 (lower is better)
Translates to: GFPLVILYVSLS*ELESGSKASIW
Trigger: CCAGATTGAGGCTTTTGACCCGGATTCTAGCTCCAATGACAAACTGACATACAGAATTACAAGCGGGAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp TCGTATTTCGATGTAGAAAACTGGGGGCGGTGGTCATaGGTATCTATTACTTTGATGAGGACCTGGGTGAGG +
Preference number: 6 (lower is better)
Translates to: SYFDVENWGRWS*VSITLMRTWVR
Trigger: CCTCACCCAGGTCCTCATCAAAGTAATAGATACCAATGACCACCGCCCCCAGTTTTCTACATCGAAATACGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp TCACTAATCTCCGCAGAGTACTCTTTGGATGTGAACTaGGGAGAGGCATTGTCAGCAACAGTGACAGCGATA +
Preference number: 6 (lower is better)
Translates to: SLISAEYSLDVN*GEALSATVTAI
Trigger: TATCGCTGTCACTGTTGCTGACAATGCCTCTCCCAAGTTCACATCCAAAGAGTACTCTGCGGAGATTAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp AATAGCAAAATAGTTGTGCACGGACGGCTCAACGATTaGATAGACGAGCAGAGCATTGGATTCCCTGTCAGC +
Preference number: 6 (lower is better)
Translates to: NSKIVVHGRLND*IDEQSIGFPVS
Trigger: GCTGACAGGGAATCCAATGCTCTGCTCGTCTATCAAATCGTTGAGCCGTCCGTGCACAACTATTTTGCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp TCTGTTTGGTTCCGAGTCGGAATCTGTGGCTCGAACTaGAAGGACAGGTGTTCCAATTACAGATGCTTCAGA +
Preference number: 6 (lower is better)
Translates to: SVWFRVGICGSN*KDRCSNYRCFR
Trigger: TCTGAAGCATCTGTAATTGGAACACCTGTCCTTCAAGTTCGAGCCACAGATTCCGACTCGGAACCAAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp GGGGCGGGATGTCGGAGTAAATGTTCTTGTTCAGCTTaGAATCAAAATAAGGTCTCTGCAAGAAAGCCGTGG +
Preference number: 6 (lower is better)
Translates to: GAGCRSKCSCSA*NQNKVSARKPW
Trigger: CCACGGCTTTCTTGCAGAGACCTTATTTTGATTCAAAGCTGAACAAGAACATTTACTCCGACATCCCGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp CCAGTAGTGGGAAGTCGACTCTCTATCCAGTCGGTCTaGAGTCTCTATAACACCTGTTTCTTCATCTATCCT +
Preference number: 6 (lower is better)
Translates to: PVVGSRLSIQSV*SLYNTCFFIYP
Trigger: AGGATAGATGAAGAAACAGGTGTTATAGAGACTTCAGACCGACTGGATAGAGAGTCGACTTCCCACTACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp GGGCGGGATGTCGGAGTAAATGTTCTTGTTCAGCTTTaGATCAAAATAAGGTCTCTGCAAGAAAGCCGTGGT +
Preference number: 6 (lower is better)
Translates to: GRDVGVNVLVQL*IKIRSLQESRG
Trigger: ACCACGGCTTTCTTGCAGAGACCTTATTTTGATTCAAAGCTGAACAAGAACATTTACTCCGACATCCCGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp GCAACTTCGTATTTCGATGTAGAAAACTGGGGGCGGTaGTCATTGGTATCTATTACTTTGATGAGGACCTGG +
Preference number: 6 (lower is better)
Translates to: ATSYFDVENWGR*SLVSITLMRTW
Trigger: CCAGGTCCTCATCAAAGTAATAGATACCAATGACCACCGCCCCCAGTTTTCTACATCGAAATACGAAGTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp CTTCACCACAGCGTAGTAGGGAAGGTTAACAAACACTaGAGCATTATCATTCTGGTCTTCGACGGTGACTTT +
Preference number: 6 (lower is better)
Translates to: LHHSVVGKVNKH*SIIILVFDGDF
Trigger: AAAGTCACCGTCGAAGACCAGAATGATAATGCTCCAGTGTTTGTTAACCTTCCCTACTACGCTGTGGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp ATGTTAATGGCAAAAGATTCGATGATGTCTGCGTCTTaGGATTGGTCTAGGCTGTACATGACTTGGCCGTTG +
Preference number: 6 (lower is better)
Translates to: MLMAKDSMMSAS*DWSRLYMTWPL
Trigger: CAACGGCCAAGTCATGTACAGCCTAGACCAATCCCAAGACGCAGACATCATCGAATCTTTTGCCATTAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp GAATTAATCTTATGCAGAAGTTGCTTTGTTGAAACGTaGGTGCCGCCTGACCTCTCGACAAAGAGTAAGACG +
Preference number: 6 (lower is better)
Translates to: ELILCRSCFVET*VPPDLSTKSKT
Trigger: CGTCTTACTCTTTGTCGAGAGGTCAGGCGGCACCCACGTTTCAACAAAGCAACTTCTGCATAAGATTAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp AGAAAGCAGAAGTCTCCGAGAACATACTCTTCCGCTTaGAACAGGTTTTCGCTGTCTCCTGAGACGATTTTG +
Preference number: 6 (lower is better)
Translates to: RKQKSPRTYSSA*NRFSLSPETIL
Trigger: CAAAATCGTCTCAGGAGACAGCGAAAACCTGTTCAAAGCGGAAGAGTATGTTCTCGGAGACTTCTGCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp ATACCGAGGTCGTACACGGTAATATTCAGGGTGTATTaGTCCATTACTTCACGGTCAAGTGGAGACAGGACT +
Preference number: 6 (lower is better)
Translates to: IPRSYTVIFRVY*SITSRSSGDRT
Trigger: AGTCCTGTCTCCACTTGACCGTGAAGTAATGGACAAATACACCCTGAATATTACCGTGTACGACCTCGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp AGAACTTCTGCAGAGAAAGCTGGACTCCCTCCGTCCTaGGCGACCACTGTGACAAGGTATTCTTTATTTAAA +
Preference number: 6 (lower is better)
Translates to: RTSAEKAGLPPS*ATTVTRYSLFK
Trigger: TTTAAATAAAGAATACCTTGTCACAGTGGTCGCCAAGGACGGAGGGAGTCCAGCTTTCTCTGCAGAAGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 72 bp TGTGATTTCCAATCAGCTGGTAGGAAATTCCTCTGTTaGGTTCCGAGTCGGAATCTGTGGCTCGAACTTGAA +
Preference number: 6 (lower is better)
Translates to: CDFQSAGRKFLC*VPSRNLWLELE
Trigger: TTCAAGTTCGAGCCACAGATTCCGACTCGGAACCAAACAGAGGAATTTCCTACCAGCTGATTGGAAATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp ATGGTATCAGAATACGAGGTCTTCTCACAGACTGGACTGTTGTCGTaGGCATCGAGAACTTTGACTTCAACTCTAGCTTTGGAAGAGAAG +
Preference number: 6 (lower is better)
Translates to: MVSEYEVFSQTGLLS*ASRTLTSTLALEEK
Trigger: CTTCTCTTCCAAAGCTAGAGTTGAAGTCAAAGTTCTCGATGCCAACGACAACAGTCCAGTCTGTGAGAAGACCTCGTATTCTGATACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp TCAGGAATGGTATCAGAATACGAGGTCTTCTCACAGACTGGACTGTaGTCGTTGGCATCGAGAACTTTGACTTCAACTCTAGCTTTGGAA +
Preference number: 6 (lower is better)
Translates to: SGMVSEYEVFSQTGL*SLASRTLTSTLALE
Trigger: TTCCAAAGCTAGAGTTGAAGTCAAAGTTCTCGATGCCAACGACAACAGTCCAGTCTGTGAGAAGACCTCGTATTCTGATACCATTCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp GAATACATGGGCAGTGTTTCAAAATCCAAGGCTCTCTaGGTGATGATGCTTCCGGAATGCGGGTTAATGTTA +
Preference number: 6 (lower is better)
Translates to: EYMGSVSKSKAL*VMMLPECGLML
Trigger: TAACATTAACCCGCATTCCGGAAGCATCATCACTCAGAGAGCCTTGGATTTTGAAACACTGCCCATGTATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp AGAACTCATCTCGATTACTCTCAGGAGTATTGCCTTTaGCAAGGATGTAAAGAACAGCCCCGCCATGTTCTA +
Preference number: 6 (lower is better)
Translates to: RTHLDYSQEYCL*QGCKEQPRHVL
Trigger: TAGAACATGGCGGGGCTGTTCTTTACATCCTTGTCAAAGGCAATACTCCTGAGAGTAATCGAGATGAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp AGATTATACAGTTGCTTCTTCTCAAAGTCCAGCTGCTaGACAATTCTAACTGCGCCGCTGAGTTTATCCACA +
Preference number: 6 (lower is better)
Translates to: RLYSCFFSKSSC*TILTAPLSLST
Trigger: TGTGGATAAACTCAGCGGCGCAGTTAGAATTGTCCAGCAGCTGGACTTTGAGAAGAAGCAACTGTATAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp CTTATCCTTAGAAAGCAGAAGTCTCCGAGAACATACTCTTCCGCTTaGAACAGGTTTTCGCTGTCTCCTGAGACGATTTTGTACCTTATC +
Preference number: 6 (lower is better)
Translates to: LILRKQKSPRTYSSA*NRFSLSPETILYLI
Trigger: GATAAGGTACAAAATCGTCTCAGGAGACAGCGAAAACCTGTTCAAAGCGGAAGAGTATGTTCTCGGAGACTTCTGCTTTCTAAGGATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp GGGACTGTTCGTAATCCAAAGCTCTCACTAGTGAAATaGGCCCCGTGTTACTATCTATGTGAAAATGATCGT +
Preference number: 6 (lower is better)
Translates to: GTVRNPKLSLVK*APCYYLCENDR
Trigger: ACGATCATTTTCACATAGATAGTAACACGGGGCTCATTTCACTAGTGAGAGCTTTGGATTACGAACAGTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp AGTGATGATGCTTCCGGAATGCGGGTTAATGTTAAATaGGTCGCCCATGTTTCCGTCTCTTATTTCATACAT +
Preference number: 6 (lower is better)
Translates to: SDDASGMRVNVK*VAHVSVSYFIH
Trigger: ATGTATGAAATAAGAGACGGAAACATGGGCGACGCATTTAACATTAACCCGCATTCCGGAAGCATCATCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp TACCTCAATTCCAGTTGGAAGAGTAACCCCGAACTGTaGAGTATGGGTATTGACGGAGTAAGAATCAAAGAA +
Preference number: 6 (lower is better)
Translates to: YLNSSWKSNPEL*SMGIDGVRIKE
Trigger: TTCTTTGATTCTTACTCCGTCAATACCCATACTCCACAGTTCGGGGTTACTCTTCCAACTGGAATTGAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CCA 72 bp TCAGGAACAGCAACTTCGTATTTCGATGTAGAAAACTaGGGGCGGTGGTCATTGGTATCTATTACTTTGATG +
Preference number: 6 (lower is better)
Translates to: SGTATSYFDVEN*GRWSLVSITLM
Trigger: CATCAAAGTAATAGATACCAATGACCACCGCCCCCAGTTTTCTACATCGAAATACGAAGTTGCTGTTCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp CTAATGGGTTCTAAAATGGAAATGAGACCCGTGTTGTaGTTCAAACCGAATTTAGGTTTTCCAGGAGCGCTT +
Preference number: 6 (lower is better)
Translates to: LMGSKMEMRPVL*FKPNLGFPGAL
Trigger: AAGCGCTCCTGGAAAACCTAAATTCGGTTTGAATCACAACACGGGTCTCATTTCCATTTTAGAACCCATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS GCA 72 bp TCACTTGTTGTCACCTCGAGTTCAAAATGGGATGTGTaGTGCCTTCTAATGGGTTCTAAAATGGAAATGAGA +
Preference number: 6 (lower is better)
Translates to: SLVVTSSSKWDV*CLLMGSKMEMR
Trigger: TCTCATTTCCATTTTAGAACCCATTAGAAGGCAGCACACATCCCATTTTGAACTCGAGGTGACAACAAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS CAA 90 bp TCTAAACCTATTAAACTTTCCTTTGTAGTAATCAGGCCAGTCAGCTaGTTGATTTCCAAGTTCTCCTTGACACTTTCAGAATCCGCCTCA +
Preference number: 6 (lower is better)
Translates to: SKPIKLSFVVIRPVS*LISKFSLTLSESAS
Trigger: TGAGGCGGATTCTGAAAGTGTCAAGGAGAACTTGGAAATCAACAAGCTGACTGGCCTGATTACTACAAAGGAAAGTTTAATAGGTTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2
CDS TCA 72 bp ATAATTCCCGTTTCCCTGTCGATGATGAAGCTTTTATaGTCATTGCCAGACAGAATAGAGTACTCTAACTTG +
Preference number: 6 (lower is better)
Translates to: IIPVSLSMMKLL*SLPDRIEYSNL
Trigger: CAAGTTAGAGTACTCTATTCTGTCTGGCAATGATCATAAAAGCTTCATCATCGACAGGGAAACGGGAATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098796.10
ENSMUST00000189017.8
ENSMUST00000191428.7
ENSMUST00000215588.2