Pregenerated sensors for FASTKD5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079043Ensembl transcript IDs: ENSMUST00000110262.3, ENSMUST00000179273.2
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTAGAGTACAACCAGGGTTACACAAAACCTGTCGTAATATATAATTaGTACAGGCACTGCACCCATGGCTACTCAACAGACGGTTATTAC | + |
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Preference number: 1 (lower is better) Translates to: LEYNQGYTKPVVIYN*YRHCTHGYSTDGYY Trigger: GTAATAACCGTCTGTTGAGTAGCCATGGGTGCAGTGCCTGTAGCAATTATATATTACGACAGGTTTTGTGTAACCCTGGTTGTACTCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| 3UTR-3UTR TCA 90 bp | ACCCACCTACACTGTGGCTTTTATAATTACTTGGAGGACAGGTTGAGAATCCCGCCACTTGAATATCCTTaGTCTGACATCTGTCAGTAC | + |
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Preference number: 2 (lower is better) Translates to: THLHCGFYNYLEDRLRIPPLEYP*SDICQY Trigger: GTACTGACAGATGTCAGATCAAGGATATTCAAGTGG...CGGGATTCTCAACCTGTCCTCCAAGTAATTATAAAAGCCACAGTGTAGGTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| 3UTR-3UTR TCA 90 bp | AACCAGGGTTACACAAAACCTGTCGTAATATATAATTGCTACAGGCACTGCACCGAGACTAGAGGTGTTTaGGATTTGAAGTCCAGGGTA | + |
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Preference number: 2 (lower is better) Translates to: NQGYTKPVVIYNCYRHCTETRGV*DLKSRV Trigger: TACCCTGGACTTCAAATCTCAAACACCTCTAGTCTC...GGTGCAGTGCCTGTAGCAATTATATATTACGACAGGTTTTGTGTAACCCTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| 3UTR-3UTR CCA 90 bp | ATTTATTCTGAGCAAAACATACAACTAGAGTACAACCAGGGTTACACAAAACCTCAGGCACTGCACCCATaGCTACTCAACAGACGGTTA | + |
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Preference number: 2 (lower is better) Translates to: IYSEQNIQLEYNQGYTKPQALHP*LLNRRL Trigger: TAACCGTCTGTTGAGTAGCCATGGGTGCAGTGCCTG...AGGTTTTGTGTAACCCTGGTTGTACTCTAGTTGTATGTTTTGCTCAGAATAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| 3UTR GCA 72 bp | AACCAGGGTTACACAAAACCTGTCGTAATATATAATTaGTACAGGCACTGCACCCATGGCTACTCAACAGAC | + |
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Preference number: 3 (lower is better) Translates to: NQGYTKPVVIYN*YRHCTHGYSTD Trigger: GTCTGTTGAGTAGCCATGGGTGCAGTGCCTGTAGCAATTATATATTACGACAGGTTTTGTGTAACCCTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| 3UTR GCA 72 bp | ACAAAACCTGTCGTAATATATAATTGCTACAGGCACTaGACCCATGGCTACTCAACAGACGGTTATTACCCA | + |
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Preference number: 3 (lower is better) Translates to: TKPVVIYNCYRH*THGYSTDGYYP Trigger: TGGGTAATAACCGTCTGTTGAGTAGCCATGGGTGCAGTGCCTGTAGCAATTATATATTACGACAGGTTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| 3UTR TCA 72 bp | GGTATCTACATAGACTACCTACCACTTGAATATCCTTaGTCTGACATCTGTCAGTACTCAGTTCCAGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: GIYIDYLPLEYP*SDICQYSVPGF Trigger: AAAACCTGGAACTGAGTACTGACAGATGTCAGATCAAGGATATTCAAGTGGTAGGTAGTCTATGTAGATACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| 3UTR TCA 72 bp | GGTATCAAATACTTGAGACTAGAGGTGTTTGAGATTTaGAGTCCAGGGTATCTACATAGACTACCTACCACT | + |
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Preference number: 3 (lower is better) Translates to: GIKYLRLEVFEI*SPGYLHRLPTT Trigger: AGTGGTAGGTAGTCTATGTAGATACCCTGGACTTCAAATCTCAAACACCTCTAGTCTCAAGTATTTGATACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| 3UTR TCA 72 bp | TACACTGTGGCTTTTATAATTACTTGGAGGACAGGTTaGGAATCCCGGTATCAAATACTTGAGACTAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: YTVAFIITWRTG*ESRYQILETRG Trigger: ACCTCTAGTCTCAAGTATTTGATACCGGGATTCTCAACCTGTCCTCCAAGTAATTATAAAAGCCACAGTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| 3UTR-3UTR CAA 90 bp | AAGATGCTTATTTATTCTGAGCAAAACATACAACTAGAGTACAACCAGGGTTACGGCTTTTATAATTACTaGGAGGACAGGTTGAGAATC | + |
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Preference number: 3 (lower is better) Translates to: KMLIYSEQNIQLEYNQGYGFYNY*EDRLRI Trigger: GATTCTCAACCTGTCCTCCAAGTAATTATAAAAGCC...GTAACCCTGGTTGTACTCTAGTTGTATGTTTTGCTCAGAATAAATAAGCATCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR GCA 90 bp | TTACTTGGAGGACAGGTTGAGAATCCCGGTATCAAATACTTGAGACTAGAGGTGTTCACTAATGGGGGCTaGATGTGGGCTAGAGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LLGGQVENPGIKYLRLEVFTNGG*MWARGH Trigger: GTGCCCTCTAGCCCACATGCAGCCCCCATTAGTGAA...CACCTCTAGTCTCAAGTATTTGATACCGGGATTCTCAACCTGTCCTCCAAGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR TCA 90 bp | TTACTTGGAGGACAGGTTGAGAATCCCGGTATCAAATACTTGAGACTAGAGGTGACACGGTACCCAATTTaGACTAGCTGCCTCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LLGGQVENPGIKYLRLEVTRYPI*TSCLLF Trigger: GAAGAGGAGGCAGCTAGTTCAAATTGGGTACCGTGT...CACCTCTAGTCTCAAGTATTTGATACCGGGATTCTCAACCTGTCCTCCAAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR TCA 90 bp | AACCAGGGTTACACAAAACCTGTCGTAATATATAATTGCTACAGGCACTGCACCAGGTGCATAACACCCTaGACCCCCAAGGAAGGAATT | + |
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Preference number: 4 (lower is better) Translates to: NQGYTKPVVIYNCYRHCTRCITP*TPKEGI Trigger: AATTCCTTCCTTGGGGGTTCAGGGTGTTATGCACCT...GGTGCAGTGCCTGTAGCAATTATATATTACGACAGGTTTTGTGTAACCCTGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR TCA 90 bp | TTACTTGGAGGACAGGTTGAGAATCCCGGTATCAAATACTTGAGACTAGAGGTGTCTCTTGAGCTAACTTaGCAAATCCTGGGCTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: LLGGQVENPGIKYLRLEVSLELT*QILGSE Trigger: CTCTGAGCCCAGGATTTGTCAAGTTAGCTCAAGAGA...CACCTCTAGTCTCAAGTATTTGATACCGGGATTCTCAACCTGTCCTCCAAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR GCA 90 bp | CCCATGGCTACTCAACAGACGGTTATTACCCACCTACACTGTGGCTTTTATAATGTGTGGCTACTCAGATaGTGCATGTTAGCACAAGCT | + |
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Preference number: 4 (lower is better) Translates to: PMATQQTVITHLHCGFYNVWLLR*CMLAQA Trigger: AGCTTGTGCTAACATGCAGCATCTGAGTAGCCACAC...ATTATAAAAGCCACAGTGTAGGTGGGTAATAACCGTCTGTTGAGTAGCCATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR CCA 90 bp | CTACTCAACAGACGGTTATTACCCACCTACACTGTGGCTTTTATAATTACTTGGGGAAGCCATTCCCAGTaGGGTAATTCTACCACACGG | + |
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Preference number: 4 (lower is better) Translates to: LLNRRLLPTYTVAFIITWGSHSQ*GNSTTR Trigger: CCGTGTGGTAGAATTACCCCACTGGGAATGGCTTCC...CCAAGTAATTATAAAAGCCACAGTGTAGGTGGGTAATAACCGTCTGTTGAGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR TCA 90 bp | AACCAGGGTTACACAAAACCTGTCGTAATATATAATTGCTACAGGCACTGCACCTCAGAAGAGCGGGTATaGGGCAAAATCATATGGTGC | + |
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Preference number: 4 (lower is better) Translates to: NQGYTKPVVIYNCYRHCTSEERV*GKIIWC Trigger: GCACCATATGATTTTGCCTCATACCCGCTCTTCTGA...GGTGCAGTGCCTGTAGCAATTATATATTACGACAGGTTTTGTGTAACCCTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR GCA 90 bp | GAGCAAAACATACAACTAGAGTACAACCAGGGTTACACAAAACCTGTCGTAATAGTGATGTTTCCCATGTaGCAATGGGCCACGCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: EQNIQLEYNQGYTKPVVIVMFPM*QWATLW Trigger: CCAAAGCGTGGCCCATTGGCACATGGGAAACATCAC...TATTACGACAGGTTTTGTGTAACCCTGGTTGTACTCTAGTTGTATGTTTTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR GCA 90 bp | CACTGTGGCTTTTATAATTACTTGGAGGACAGGTTGAGAATCCCGGTATCAAATCTCTTTCATCCAGGATaGGTAAGGCTGAGCAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: HCGFYNYLEDRLRIPVSNLFHPG*VRLSRQ Trigger: TTGCCTGCTCAGCCTTACGCATCCTGGATGAAAGAG...ATTTGATACCGGGATTCTCAACCTGTCCTCCAAGTAATTATAAAAGCCACAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR GCA 90 bp | AACCAGGGTTACACAAAACCTGTCGTAATATATAATTGCTACAGGCACTGCACCTTTACTTCGACAGTGTaGTACCCTCGGAGGCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: NQGYTKPVVIYNCYRHCTFTSTV*YPRRQR Trigger: TCTTTGCCTCCGAGGGTAGCACACTGTCGAAGTAAA...GGTGCAGTGCCTGTAGCAATTATATATTACGACAGGTTTTGTGTAACCCTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR CCA 90 bp | CCCATGGCTACTCAACAGACGGTTATTACCCACCTACACTGTGGCTTTTATAATTTTTTCACACTCAGCTaGCAGAGCAAAGCAAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: PMATQQTVITHLHCGFYNFFTLS*QSKAKL Trigger: CAGCTTTGCTTTGCTCTGCCAGCTGAGTGTGAAAAA...ATTATAAAAGCCACAGTGTAGGTGGGTAATAACCGTCTGTTGAGTAGCCATGGG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR CCA 90 bp | TTACTTGGAGGACAGGTTGAGAATCCCGGTATCAAATACTTGAGACTAGAGGTGCCTGGAAATACCTCTTaGCTTTTCCCTTCAGCAACT | + |
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Preference number: 4 (lower is better) Translates to: LLGGQVENPGIKYLRLEVPGNTS*LFPSAT Trigger: AGTTGCTGAAGGGAAAAGCCAAGAGGTATTTCCAGG...CACCTCTAGTCTCAAGTATTTGATACCGGGATTCTCAACCTGTCCTCCAAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR CCA 90 bp | AAGATGCTTATTTATTCTGAGCAAAACATACAACTAGAGTACAACCAGGGTTACAATGGGGGCTGCATGTaGGCTAGAGGGCACAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: KMLIYSEQNIQLEYNQGYNGGCM*ARGHKP Trigger: TGGCTTGTGCCCTCTAGCCCACATGCAGCCCCCATT...GTAACCCTGGTTGTACTCTAGTTGTATGTTTTGCTCAGAATAAATAAGCATCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR CCA 90 bp | TTACTTGGAGGACAGGTTGAGAATCCCGGTATCAAATACTTGAGACTAGAGGTGGTTGCCCTTGTAATCTaGACATTCAATGGCAACTGT | + |
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Preference number: 4 (lower is better) Translates to: LLGGQVENPGIKYLRLEVVALVI*TFNGNC Trigger: ACAGTTGCCATTGAATGTCCAGATTACAAGGGCAAC...CACCTCTAGTCTCAAGTATTTGATACCGGGATTCTCAACCTGTCCTCCAAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR TCA 90 bp | TTACTTGGAGGACAGGTTGAGAATCCCGGTATCAAATACTTGAGACTAGAGGTGAGGTCCTGTGGTACTTaGCGATTTTCACCTATAATA | + |
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Preference number: 4 (lower is better) Translates to: LLGGQVENPGIKYLRLEVRSCGT*RFSPII Trigger: TATTATAGGTGAAAATCGTCAAGTACCACAGGACCT...CACCTCTAGTCTCAAGTATTTGATACCGGGATTCTCAACCTGTCCTCCAAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR TCA 90 bp | GAGCAAAACATACAACTAGAGTACAACCAGGGTTACACAAAACCTGTCGTAATAGCTCTGGGTACTGGTTaGATTCAGGCATCTTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: EQNIQLEYNQGYTKPVVIALGTG*IQASFC Trigger: ACAGAAAGATGCCTGAATTCAACCAGTACCCAGAGC...TATTACGACAGGTTTTGTGTAACCCTGGTTGTACTCTAGTTGTATGTTTTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR GCA 90 bp | AACCAGGGTTACACAAAACCTGTCGTAATATATAATTGCTACAGGCACTGCACCAACAGAATTCTGTTCTaGTGGCAAAGAGCTGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: NQGYTKPVVIYNCYRHCTNRILF*WQRAEL Trigger: AAGCTCAGCTCTTTGCCAGCAGAACAGAATTCTGTT...GGTGCAGTGCCTGTAGCAATTATATATTACGACAGGTTTTGTGTAACCCTGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR GCA 90 bp | TTACTTGGAGGACAGGTTGAGAATCCCGGTATCAAATACTTGAGACTAGAGGTGAAAGTATTCAGAAAATaGCAAGCCAATCAGGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LLGGQVENPGIKYLRLEVKVFRK*QANQAG Trigger: ACCTGCCTGATTGGCTTGGCATTTTCTGAATACTTT...CACCTCTAGTCTCAAGTATTTGATACCGGGATTCTCAACCTGTCCTCCAAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR GCA 90 bp | CACTGTGGCTTTTATAATTACTTGGAGGACAGGTTGAGAATCCCGGTATCAAATGGCAAAATCATATGGTaGTTAATGTACTGGGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: HCGFYNYLEDRLRIPVSNGKIIW*LMYWGP Trigger: TGGCCCCCAGTACATTAAGCACCATATGATTTTGCC...ATTTGATACCGGGATTCTCAACCTGTCCTCCAAGTAATTATAAAAGCCACAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR CCA 90 bp | CCCATGGCTACTCAACAGACGGTTATTACCCACCTACACTGTGGCTTTTATAATAGAATTCTGTTCTGCTaGCAAAGAGCTGAGCTTATA | + |
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Preference number: 4 (lower is better) Translates to: PMATQQTVITHLHCGFYNRILFC*QRAELI Trigger: TATAAGCTCAGCTCTTTGCCAGCAGAACAGAATTCT...ATTATAAAAGCCACAGTGTAGGTGGGTAATAACCGTCTGTTGAGTAGCCATGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR CCA 90 bp | CTACTCAACAGACGGTTATTACCCACCTACACTGTGGCTTTTATAATTACTTGGTTGCATCAGGTCCTGTaGTACTTGACGATTTTCACC | + |
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Preference number: 4 (lower is better) Translates to: LLNRRLLPTYTVAFIITWLHQVL*YLTIFT Trigger: GGTGAAAATCGTCAAGTACCACAGGACCTGATGCAA...CCAAGTAATTATAAAAGCCACAGTGTAGGTGGGTAATAACCGTCTGTTGAGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR CCA 90 bp | CCCATGGCTACTCAACAGACGGTTATTACCCACCTACACTGTGGCTTTTATAATTTCTTCTGTGTTGGGTaGCTTATAATTCAGAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: PMATQQTVITHLHCGFYNFFCVG*LIIQSS Trigger: GGAACTCTGAATTATAAGCCACCCAACACAGAAGAA...ATTATAAAAGCCACAGTGTAGGTGGGTAATAACCGTCTGTTGAGTAGCCATGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR TCA 90 bp | CTACTCAACAGACGGTTATTACCCACCTACACTGTGGCTTTTATAATTACTTGGCTCCAATTTTCCGCATaGCAAATTCAGAGAGACTAC | + |
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Preference number: 4 (lower is better) Translates to: LLNRRLLPTYTVAFIITWLQFSA*QIQRDY Trigger: GTAGTCTCTCTGAATTTGTCATGCGGAAAATTGGAG...CCAAGTAATTATAAAAGCCACAGTGTAGGTGGGTAATAACCGTCTGTTGAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR TCA 90 bp | CACTGTGGCTTTTATAATTACTTGGAGGACAGGTTGAGAATCCCGGTATCAAATAAGGAAGGAATTCTCTaGGGAGCAATTTCTCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: HCGFYNYLEDRLRIPVSNKEGIL*GAISPN Trigger: GTTTGGAGAAATTGCTCCTCAGAGAATTCCTTCCTT...ATTTGATACCGGGATTCTCAACCTGTCCTCCAAGTAATTATAAAAGCCACAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR GCA 90 bp | GAGCAAAACATACAACTAGAGTACAACCAGGGTTACACAAAACCTGTCGTAATATGGCTACTCAGATGCTaGATGTTAGCACAAGCTAGA | + |
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Preference number: 4 (lower is better) Translates to: EQNIQLEYNQGYTKPVVIWLLRC*MLAQAR Trigger: TCTAGCTTGTGCTAACATGCAGCATCTGAGTAGCCA...TATTACGACAGGTTTTGTGTAACCCTGGTTGTACTCTAGTTGTATGTTTTGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR CCA 90 bp | GAGCAAAACATACAACTAGAGTACAACCAGGGTTACACAAAACCTGTCGTAATACGTTCTTCACTTTTCTaGCAAGATGGCAGGAGCTAT | + |
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Preference number: 4 (lower is better) Translates to: EQNIQLEYNQGYTKPVVIRSSLF*QDGRSY Trigger: ATAGCTCCTGCCATCTTGCCAGAAAAGTGAAGAACG...TATTACGACAGGTTTTGTGTAACCCTGGTTGTACTCTAGTTGTATGTTTTGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR CCA 90 bp | AACCAGGGTTACACAAAACCTGTCGTAATATATAATTGCTACAGGCACTGCACCCCTGATGGCAAAATCTaGTTTCATACACATCTAGCA | + |
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Preference number: 4 (lower is better) Translates to: NQGYTKPVVIYNCYRHCTPDGKI*FHTHLA Trigger: TGCTAGATGTGTATGAAACCAGATTTTGCCATCAGG...GGTGCAGTGCCTGTAGCAATTATATATTACGACAGGTTTTGTGTAACCCTGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR CCA 90 bp | AACCAGGGTTACACAAAACCTGTCGTAATATATAATTGCTACAGGCACTGCACCAATCTGGACATTCAATaGCAACTGTACCATCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: NQGYTKPVVIYNCYRHCTNLDIQ*QLYHQE Trigger: CTCTTGATGGTACAGTTGCCATTGAATGTCCAGATT...GGTGCAGTGCCTGTAGCAATTATATATTACGACAGGTTTTGTGTAACCCTGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR TCA 90 bp | AACCAGGGTTACACAAAACCTGTCGTAATATATAATTGCTACAGGCACTGCACCAACTTACTTCTCTCTTaGGCTAACTTGACAAATCCT | + |
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Preference number: 4 (lower is better) Translates to: NQGYTKPVVIYNCYRHCTNLLLS*ANLTNP Trigger: AGGATTTGTCAAGTTAGCTCAAGAGAGAAGTAAGTT...GGTGCAGTGCCTGTAGCAATTATATATTACGACAGGTTTTGTGTAACCCTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR GCA 90 bp | GAGCAAAACATACAACTAGAGTACAACCAGGGTTACACAAAACCTGTCGTAATAGTCTCTAACTCAATTTaGCCCTGGAAATACCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: EQNIQLEYNQGYTKPVVIVSNSI*PWKYLL Trigger: CAAGAGGTATTTCCAGGGGCAAATTGAGTTAGAGAC...TATTACGACAGGTTTTGTGTAACCCTGGTTGTACTCTAGTTGTATGTTTTGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR CCA 90 bp | CTACTCAACAGACGGTTATTACCCACCTACACTGTGGCTTTTATAATTACTTGGACTTTTCTGGCAAGATaGCAGGAGCTATTACATTCA | + |
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Preference number: 4 (lower is better) Translates to: LLNRRLLPTYTVAFIITWTFLAR*QELLHS Trigger: TGAATGTAATAGCTCCTGCCATCTTGCCAGAAAAGT...CCAAGTAATTATAAAAGCCACAGTGTAGGTGGGTAATAACCGTCTGTTGAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR GCA 90 bp | AAGATGCTTATTTATTCTGAGCAAAACATACAACTAGAGTACAACCAGGGTTACCTCCTCTTCATATTGTaGAATCCAAGTAGAGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: KMLIYSEQNIQLEYNQGYLLFIL*NPSRAL Trigger: CAGGGCTCTACTTGGATTGCACAATATGAAGAGGAG...GTAACCCTGGTTGTACTCTAGTTGTATGTTTTGCTCAGAATAAATAAGCATCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR CCA 90 bp | ATTTATTCTGAGCAAAACATACAACTAGAGTACAACCAGGGTTACACAAAACCTAGGTGCTCTGGGTACTaGTTGAATTCAGGCATCTTT | + |
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Preference number: 4 (lower is better) Translates to: IYSEQNIQLEYNQGYTKPRCSGY*LNSGIF Trigger: AAAGATGCCTGAATTCAACCAGTACCCAGAGCACCT...AGGTTTTGTGTAACCCTGGTTGTACTCTAGTTGTATGTTTTGCTCAGAATAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR CCA 90 bp | GAGCAAAACATACAACTAGAGTACAACCAGGGTTACACAAAACCTGTCGTAATAAACTCAATTTGCCCCTaGAAATACCTCTTGGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: EQNIQLEYNQGYTKPVVINSICP*KYLLAF Trigger: AAAAGCCAAGAGGTATTTCCAGGGGCAAATTGAGTT...TATTACGACAGGTTTTGTGTAACCCTGGTTGTACTCTAGTTGTATGTTTTGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR TCA 90 bp | ATTTATTCTGAGCAAAACATACAACTAGAGTACAACCAGGGTTACACAAAACCTATGTTAGCATCAAGCTaGACCTCTAAGTCAGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: IYSEQNIQLEYNQGYTKPMLASS*TSKSEE Trigger: CTCTTCTGACTTAGAGGTTCAGCTTGATGCTAACAT...AGGTTTTGTGTAACCCTGGTTGTACTCTAGTTGTATGTTTTGCTCAGAATAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR TCA 90 bp | GAGCAAAACATACAACTAGAGTACAACCAGGGTTACACAAAACCTGTCGTAATATTTCCCTTCAGCAACTaGTTCATCAAATCATCTGTA | + |
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Preference number: 4 (lower is better) Translates to: EQNIQLEYNQGYTKPVVIFPFSN*FIKSSV Trigger: TACAGATGATTTGATGAATCAGTTGCTGAAGGGAAA...TATTACGACAGGTTTTGTGTAACCCTGGTTGTACTCTAGTTGTATGTTTTGCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR GCA 90 bp | ATTTATTCTGAGCAAAACATACAACTAGAGTACAACCAGGGTTACACAAAACCTAGTGATTCTAGTCTTTaGATCAGGTCCTGTGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: IYSEQNIQLEYNQGYTKPSDSSL*IRSCGT Trigger: AGTACCACAGGACCTGATGCAAAGACTAGAATCACT...AGGTTTTGTGTAACCCTGGTTGTACTCTAGTTGTATGTTTTGCTCAGAATAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
||
| CDS-3UTR CCA 90 bp | CTACTCAACAGACGGTTATTACCCACCTACACTGTGGCTTTTATAATTACTTGGAAAATTCTTCTGTGTTaGGTGGCTTATAATTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLNRRLLPTYTVAFIITWKILLC*VAYNSE Trigger: CTCTGAATTATAAGCCACCCAACACAGAAGAATTTT...CCAAGTAATTATAAAAGCCACAGTGTAGGTGGGTAATAACCGTCTGTTGAGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR CCA 90 bp | CACTGTGGCTTTTATAATTACTTGGAGGACAGGTTGAGAATCCCGGTATCAAATACTATTAAAGGGCATTaGTTTCATGTTAGCATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HCGFYNYLEDRLRIPVSNTIKGH*FHVSIK Trigger: CTTGATGCTAACATGAAACCAATGCCCTTTAATAGT...ATTTGATACCGGGATTCTCAACCTGTCCTCCAAGTAATTATAAAAGCCACAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS-3UTR CCA 90 bp | AAGATGCTTATTTATTCTGAGCAAAACATACAACTAGAGTACAACCAGGGTTACAGGACCACAGAATTTTaGCAACATCTTTACTTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: KMLIYSEQNIQLEYNQGYRTTEF*QHLYFD Trigger: GTCGAAGTAAAGATGTTGCCAAAATTCTGTGGTCCT...GTAACCCTGGTTGTACTCTAGTTGTATGTTTTGCTCAGAATAAATAAGCATCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
||
| CDS-3UTR CCA 90 bp | ATTTATTCTGAGCAAAACATACAACTAGAGTACAACCAGGGTTACACAAAACCTAAGCAAAGCTGTTACTaGATAGCAAAACAGAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: IYSEQNIQLEYNQGYTKPKQSCY*IAKQNS Trigger: AGAATTCTGTTTTGCTATCCAGTAACAGCTTTGCTT...AGGTTTTGTGTAACCCTGGTTGTACTCTAGTTGTATGTTTTGCTCAGAATAAAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
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| CDS CCA 90 bp | TTGTTTGTGAACTGGATAGCTAGCTTCACTAATGGGGGCTGCATGTaGGCTAGAGGGCACAAGCCAACCATCCCATCCCCCAATCTATCT | + |
|
Preference number: 5 (lower is better) Translates to: LFVNWIASFTNGGCM*ARGHKPTIPSPNLS Trigger: AGATAGATTGGGGGATGGGATGGTTGGCTTGTGCCCTCTAGCCCACATGCAGCCCCCATTAGTGAAGCTAGCTATCCAGTTCACAAACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
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| CDS TCA 90 bp | GGAATCAAAGACCTCTACATCCTCTTCACCTCCTCCAGCACTGGATaGGTCTGGATGCAGTGTGCTGGCATTAAGGGTAGAAGCTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GIKDLYILFTSSSTG*VWMQCAGIKGRSFV Trigger: AACAAAGCTTCTACCCTTAATGCCAGCACACTGCATCCAGACTCATCCAGTGCTGGAGGAGGTGAAGAGGATGTAGAGGTCTTTGATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
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| CDS TCA 90 bp | GGAAGCCATTCCCAGTGGGGTAATTCTACCACACGGTACCCAATTTaGACTAGCTGCCTCCTCTTCATATTGTGCAATCCAAGTAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GSHSQWGNSTTRYPI*TSCLLFILCNPSRA Trigger: GGCTCTACTTGGATTGCACAATATGAAGAGGAGGCAGCTAGTTCAAATTGGGTACCGTGTGGTAGAATTACCCCACTGGGAATGGCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
||
| CDS CCA 90 bp | TTCACCAAGGGTACAGTTGTCTTCTTTCTTAACTCCATGGGTGGCTaGCCAGTCTCTAACTCAATTTGCCCCTGGAAATACCTCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FTKGTVVFFLNSMGG*PVSNSICPWKYLLA Trigger: AGCCAAGAGGTATTTCCAGGGGCAAATTGAGTTAGAGACTGGCCAGCCACCCATGGAGTTAAGAAAGAAGACAACTGTACCCTTGGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
||
| CDS CCA 90 bp | AACCAGAGTTCACCAAGGGTACAGTTGTCTTCTTTCTTAACTCCATaGGTGGCTGGCCAGTCTCTAACTCAATTTGCCCCTGGAAATACC | + |
|
Preference number: 5 (lower is better) Translates to: NQSSPRVQLSSFLTP*VAGQSLTQFAPGNT Trigger: GGTATTTCCAGGGGCAAATTGAGTTAGAGACTGGCCAGCCACCCATGGAGTTAAGAAAGAAGACAACTGTACCCTTGGTGAACTCTGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
||
| CDS-3UTR CAA 90 bp | ACCCACCTACACTGTGGCTTTTATAATTACTTGGAGGACAGGTTGAGAATCCCGCCCTGGAAATACCTCTaGGCTTTTCCCTTCAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: THLHCGFYNYLEDRLRIPPWKYL*AFPFSN Trigger: GTTGCTGAAGGGAAAAGCCAAGAGGTATTTCCAGGG...CGGGATTCTCAACCTGTCCTCCAAGTAATTATAAAAGCCACAGTGTAGGTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
||
| CDS CCA 90 bp | TGTTGGGTGGCTTATAATTCAGAGTTCCAAAGGACCACAGAATTTTaGCAACATCTTTACTTCGACAGTGTGCTACCCTCGGAGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: CWVAYNSEFQRTTEF*QHLYFDSVLPSEAK Trigger: CTTTGCCTCCGAGGGTAGCACACTGTCGAAGTAAAGATGTTGCCAAAATTCTGTGGTCCTTTGGAACTCTGAATTATAAGCCACCCAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
||
| CDS-3UTR CAA 90 bp | ACCCACCTACACTGTGGCTTTTATAATTACTTGGAGGACAGGTTGAGAATCCCGAATCTATCTGTCCCATaGCAACCAGAGTTCACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: THLHCGFYNYLEDRLRIPNLSVP*QPEFTK Trigger: CTTGGTGAACTCTGGTTGCAATGGGACAGATAGATT...CGGGATTCTCAACCTGTCCTCCAAGTAATTATAAAAGCCACAGTGTAGGTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
||
| CDS-3UTR CAA 90 bp | CCCATGGCTACTCAACAGACGGTTATTACCCACCTACACTGTGGCTTTTATAATTGCCTCCTCTTCATATaGTGCAATCCAAGTAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PMATQQTVITHLHCGFYNCLLFI*CNPSRA Trigger: GGCTCTACTTGGATTGCACAATATGAAGAGGAGGCA...ATTATAAAAGCCACAGTGTAGGTGGGTAATAACCGTCTGTTGAGTAGCCATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
||
| CDS TCA 90 bp | TCAATTTGCCCCTGGAAATACCTCTTGGCTTTTCCCTTCAGCAACTaGTTCATCAAATCATCTGTAAGGCTGACTCCCACTTGCTTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SICPWKYLLAFPFSN*FIKSSVRLTPTCLN Trigger: GTTTAAGCAAGTGGGAGTCAGCCTTACAGATGATTTGATGAATCAGTTGCTGAAGGGAAAAGCCAAGAGGTATTTCCAGGGGCAAATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
||
| CDS TCA 90 bp | ATCAAATCATCTGTAAGGCTGACTCCCACTTGCTTAAACCGTAATTaGGCTCCATCTTCAGTTGGTGTCGCTTCACTATTAAAGGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: IKSSVRLTPTCLNRN*APSSVGVASLLKGI Trigger: AATGCCCTTTAATAGTGAAGCGACACCAACTGAAGATGGAGCTCAATTACGGTTTAAGCAAGTGGGAGTCAGCCTTACAGATGATTTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
||
| CDS CCA 90 bp | ATCAGATCGGAGGTGTTAAAGAGCTGTATGTTTTTCACACTCAGCTaGCAGAGCAAAGCAAAGCTGTTACTGGATAGCAAAACAGAATTC | + |
|
Preference number: 5 (lower is better) Translates to: IRSEVLKSCMFFTLS*QSKAKLLLDSKTEF Trigger: GAATTCTGTTTTGCTATCCAGTAACAGCTTTGCTTTGCTCTGCCAGCTGAGTGTGAAAAACATACAGCTCTTTAACACCTCCGATCTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
||
| CDS-3UTR CAA 90 bp | CCCATGGCTACTCAACAGACGGTTATTACCCACCTACACTGTGGCTTTTATAATCTAGGAATTCAGGCTTaGATCTCATATCCTTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: PMATQQTVITHLHCGFYNLGIQA*ISYPYL Trigger: CAAGTAAGGATATGAGATCAAAGCCTGAATTCCTAG...ATTATAAAAGCCACAGTGTAGGTGGGTAATAACCGTCTGTTGAGTAGCCATGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
||
| CDS-3UTR CAA 90 bp | GAGCAAAACATACAACTAGAGTACAACCAGGGTTACACAAAACCTGTCGTAATAGGAACCATAGCAGTATaGGTTCTTGTTTGTGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: EQNIQLEYNQGYTKPVVIGTIAV*VLVCEL Trigger: CAGTTCACAAACAAGAACCAATACTGCTATGGTTCC...TATTACGACAGGTTTTGTGTAACCCTGGTTGTACTCTAGTTGTATGTTTTGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
||
| CDS-3UTR CAA 90 bp | CACTGTGGCTTTTATAATTACTTGGAGGACAGGTTGAGAATCCCGGTATCAAATATCTCATATCCTTACTaGCTAGATTCCACAGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: HCGFYNYLEDRLRIPVSNISYPY*LDSTDL Trigger: CAAATCTGTGGAATCTAGCAAGTAAGGATATGAGAT...ATTTGATACCGGGATTCTCAACCTGTCCTCCAAGTAATTATAAAAGCCACAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110262.3 |
||
| CDS CCA 72 bp | GGAGCTATTACATTCAGGGAGCGTCTGTCCCCCGTGTaGCGTGATGTTTCCCATGTGCCAATGGGCCACGCT | + |
|
Preference number: 6 (lower is better) Translates to: GAITFRERLSPV*RDVSHVPMGHA Trigger: AGCGTGGCCCATTGGCACATGGGAAACATCACGCCACACGGGGGACAGACGCTCCCTGAATGTAATAGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
||
| CDS TCA 72 bp | GACCTCTACATCCTCTTCACCTCCTCCAGCACTGGATaGGTCTGGATGCAGTGTGCTGGCATTAAGGGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: DLYILFTSSSTG*VWMQCAGIKGR Trigger: TCTACCCTTAATGCCAGCACACTGCATCCAGACTCATCCAGTGCTGGAGGAGGTGAAGAGGATGTAGAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
||
| CDS GCA 72 bp | AACTCCATGGGTGGCTGGCCAGTCTCTAACTCAATTTaGCCCTGGAAATACCTCTTGGCTTTTCCCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: NSMGGWPVSNSI*PWKYLLAFPFS Trigger: GCTGAAGGGAAAAGCCAAGAGGTATTTCCAGGGGCAAATTGAGTTAGAGACTGGCCAGCCACCCATGGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
||
| CDS CAA 72 bp | CTGTCCCATTGCAACCAGAGTTCACCAAGGGTACAGTaGTCTTCTTTCTTAACTCCATGGGTGGCTGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LSHCNQSSPRVQ*SSFLTPWVAGQ Trigger: CTGGCCAGCCACCCATGGAGTTAAGAAAGAAGACAACTGTACCCTTGGTGAACTCTGGTTGCAATGGGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
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| CDS GCA 72 bp | AGCCAACCATCCCATCCCCCAATCTATCTGTCCCATTaGAACCAGAGTTCACCAAGGGTACAGTTGTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SQPSHPPIYLSH*NQSSPRVQLSS Trigger: AGAAGACAACTGTACCCTTGGTGAACTCTGGTTGCAATGGGACAGATAGATTGGGGGATGGGATGGTTGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
||
| CDS CCA 72 bp | GATCTAGAGTCATCTCCCATACCTGATGGCAAAATCTaGTTTCATACACATCTAGCATGGACAGGGAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: DLESSPIPDGKI*FHTHLAWTGRG Trigger: CCCCCTCCCTGTCCATGCTAGATGTGTATGAAACCAGATTTTGCCATCAGGTATGGGAGATGACTCTAGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
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| CDS CCA 72 bp | AAATGCCAAGCCAATCAGGCAGGTGAGAAGGTGCTCTaGGTACTGGTTGAATTCAGGCATCTTTCTGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: KCQANQAGEKVL*VLVEFRHLSVD Trigger: ATCCACAGAAAGATGCCTGAATTCAACCAGTACCCAGAGCACCTTCTCACCTGCCTGATTGGCTTGGCATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
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| CDS CCA 72 bp | TCACCAAGGGTACAGTTGTCTTCTTTCTTAACTCCATaGGTGGCTGGCCAGTCTCTAACTCAATTTGCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SPRVQLSSFLTP*VAGQSLTQFAP Trigger: AGGGGCAAATTGAGTTAGAGACTGGCCAGCCACCCATGGAGTTAAGAAAGAAGACAACTGTACCCTTGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
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| CDS CAA 90 bp | CCAATCTATCTGTCCCATTGCAACCAGAGTTCACCAAGGGTACAGTaGTCTTCTTTCTTAACTCCATGGGTGGCTGGCCAGTCTCTAACT | + |
|
Preference number: 6 (lower is better) Translates to: PIYLSHCNQSSPRVQ*SSFLTPWVAGQSLT Trigger: AGTTAGAGACTGGCCAGCCACCCATGGAGTTAAGAAAGAAGACAACTGTACCCTTGGTGAACTCTGGTTGCAATGGGACAGATAGATTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
||
| CDS TCA 72 bp | TCCCAGTGGGGTAATTCTACCACACGGTACCCAATTTaGACTAGCTGCCTCCTCTTCATATTGTGCAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: SQWGNSTTRYPI*TSCLLFILCNP Trigger: TGGATTGCACAATATGAAGAGGAGGCAGCTAGTTCAAATTGGGTACCGTGTGGTAGAATTACCCCACTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
||
| CDS TCA 72 bp | CCCTGGAAATACCTCTTGGCTTTTCCCTTCAGCAACTaGTTCATCAAATCATCTGTAAGGCTGACTCCCACT | + |
|
Preference number: 6 (lower is better) Translates to: PWKYLLAFPFSN*FIKSSVRLTPT Trigger: AGTGGGAGTCAGCCTTACAGATGATTTGATGAATCAGTTGCTGAAGGGAAAAGCCAAGAGGTATTTCCAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
||
| CDS TCA 72 bp | TTCTTGGCAGTCAGAGCAAAATCACATGTTCTTGTTTaGCGGGGCTTCATTAGAGGTGGACAGGGAAATGTT | + |
|
Preference number: 6 (lower is better) Translates to: FLAVRAKSHVLV*RGFIRGGQGNV Trigger: AACATTTCCCTGTCCACCTCTAATGAAGCCCCGTCAAACAAGAACATGTGATTTTGCTCTGACTGCCAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179273.2 |
||
| CDS CAA 72 bp | TTACAAGGTGCTTTGTACTTTAAAGGTTCTAATAGCTaGAGAGCGGCTGACATTCTGGAGTCTGTGCTGATC | + |
|
Preference number: 6 (lower is better) Translates to: LQGALYFKGSNS*RAADILESVLI Trigger: GATCAGCACAGACTCCAGAATGTCAGCCGCTCTCAAGCTATTAGAACCTTTAAAGTACAAAGCACCTTGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179273.2 |
||
| CDS TCA 72 bp | AACAGTTCCTTAGTGAGTTCAAACTTACTTCTCTCTTaGGCTAACTTGACAAATCCTGGGCTCAGAGCAACA | + |
|
Preference number: 6 (lower is better) Translates to: NSSLVSSNLLLS*ANLTNPGLRAT Trigger: TGTTGCTCTGAGCCCAGGATTTGTCAAGTTAGCTCAAGAGAGAAGTAAGTTTGAACTCACTAAGGAACTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
||
| CDS CCA 72 bp | AAATCCTGGGCTCAGAGCAACATTTATGAACTCAACTaGAAAGTATTCAGAAAATGCCAAGCCAATCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: KSWAQSNIYELN*KVFRKCQANQA Trigger: TGCCTGATTGGCTTGGCATTTTCTGAATACTTTCCAGTTGAGTTCATAAATGTTGCTCTGAGCCCAGGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
||
| CDS CCA 72 bp | CTTTGTGCAAAATTAGTTCAACTTCTGAAGCAGCTATaGGTTGGTGAGTGTCACTTCTGTTATAGCTGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LCAKLVQLLKQL*VGECHFCYSCE Trigger: TTCACAGCTATAACAGAAGTGACACTCACCAACCCATAGCTGCTTCAGAAGTTGAACTAATTTTGCACAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
||
| CDS CCA 72 bp | TTGAAGGTGAGAATTAAGACGGTTGCCCTTGTAATCTaGACATTCAATGGCAACTGTACCATCAAGAGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: LKVRIKTVALVI*TFNGNCTIKSK Trigger: TTTACTCTTGATGGTACAGTTGCCATTGAATGTCCAGATTACAAGGGCAACCGTCTTAATTCTCACCTTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
||
| CDS CAA 90 bp | CCAACATGGTCTCAAGTAAATAGAGAGTTTCTAGGAATTCAGGCTTaGATCTCATATCCTTACTTGCTAGATTCCACAGATTTGCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: PTWSQVNREFLGIQA*ISYPYLLDSTDLQM Trigger: CATCTGCAAATCTGTGGAATCTAGCAAGTAAGGATATGAGATCAAAGCCTGAATTCCTAGAAACTCTCTATTTACTTGAGACCATGTTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
||
| CDS CAA 90 bp | AATAGAGAGTTTCTAGGAATTCAGGCTTTGATCTCATATCCTTACTaGCTAGATTCCACAGATTTGCAGATGTTTCTTGTTGAAGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: NREFLGIQALISYPY*LDSTDLQMFLVEGE Trigger: CTCACCTTCAACAAGAAACATCTGCAAATCTGTGGAATCTAGCAAGTAAGGATATGAGATCAAAGCCTGAATTCCTAGAAACTCTCTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
||
| CDS CCA 72 bp | ATTTATGAGACTGGAATAAAATTCTTCTGTGTTGGGTaGCTTATAATTCAGAGTTCCAAAGGACCACAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: IYETGIKFFCVG*LIIQSSKGPQN Trigger: ATTCTGTGGTCCTTTGGAACTCTGAATTATAAGCCACCCAACACAGAAGAATTTTATTCCAGTCTCATAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
||
| CDS CAA 72 bp | TTTCTAGGAATTCAGGCTTTGATCTCATATCCTTACTaGCTAGATTCCACAGATTTGCAGATGTTTCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: FLGIQALISYPY*LDSTDLQMFLV Trigger: AACAAGAAACATCTGCAAATCTGTGGAATCTAGCAAGTAAGGATATGAGATCAAAGCCTGAATTCCTAGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
||
| CDS CAA 72 bp | TCTCAAGTAAATAGAGAGTTTCTAGGAATTCAGGCTTaGATCTCATATCCTTACTTGCTAGATTCCACAGAT | + |
|
Preference number: 6 (lower is better) Translates to: SQVNREFLGIQA*ISYPYLLDSTD Trigger: ATCTGTGGAATCTAGCAAGTAAGGATATGAGATCAAAGCCTGAATTCCTAGAAACTCTCTATTTACTTGAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110262.3 ENSMUST00000179273.2 |
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