Pregenerated sensors for FASTKD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021532Ensembl transcript IDs: ENSMUST00000051784.10, ENSMUST00000221640.2, ENSMUST00000222631.2, ENSMUST00000222660.2, ENSMUST00000222685.2, ENSMUST00000223187.2, ENSMUST00000223319.2
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGCAAAATCGCTGTGGCCCATCAATACACAGCGCCACCCTTTTGTaGATATCCTCATCCACTGTACACGGCAATACAAATCCATCTTCA | + |
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Preference number: 1 (lower is better) Translates to: KQNRCGPSIHSATLL*ISSSTVHGNTNPSS Trigger: TGAAGATGGATTTGTATTGCCGTGTACAGTGGATGAGGATATCCACAAAAGGGTGGCGCTGTGTATTGATGGGCCACAGCGATTTTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223319.2 |
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| 3UTR TCA 90 bp | TTAAACTGTCTCTCTTACAAATATCATCTTTTTCACCGAGAATCCTaGAGCCAGTTTCCTCTATTACCAGTGGACAGCGGAGCTTTGAGA | + |
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Preference number: 1 (lower is better) Translates to: LNCLSYKYHLFHRES*SQFPLLPVDSGALR Trigger: TCTCAAAGCTCCGCTGTCCACTGGTAATAGAGGAAACTGGCTTCAGGATTCTCGGTGAAAAAGATGATATTTGTAAGAGAGACAGTTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223319.2 |
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| 3UTR CAA 90 bp | TCCAAGCAAAATCGCTGTGGCCCATCAATACACAGCGCCACCCTTTaGTGGATATCCTCATCCACTGTACACGGCAATACAAATCCATCT | + |
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Preference number: 2 (lower is better) Translates to: SKQNRCGPSIHSATL*WISSSTVHGNTNPS Trigger: AGATGGATTTGTATTGCCGTGTACAGTGGATGAGGATATCCACAAAAGGGTGGCGCTGTGTATTGATGGGCCACAGCGATTTTGCTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223319.2 |
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| 3UTR-3UTR GCA 90 bp | CAATACACATATACATGGTATAAGAAAAACCGCAGACCCTTTTCAGATCCCAAGTTCCTGTGTTCCTCGTaGTGGTTCATTTCTTCCACA | + |
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Preference number: 2 (lower is better) Translates to: QYTYTWYKKNRRPFSDPKFLCSS*WFISST Trigger: TGTGGAAGAAATGAACCAGCACGAGGAACACAGGAA...CTTGGGATCTGAAAAGGGTCTGCGGTTTTTCTTATACCATGTATATGTGTATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223319.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTACAAATATCATCTTTTTCACCGAGAATCCTGAAGCCAGTTTCCTCTATCTGTGTTCCTCGTGCTaGTTCATTTCTTCCACAATG | + |
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Preference number: 2 (lower is better) Translates to: SLTNIIFFTENPEASFLYLCSSC*FISSTM Trigger: CATTGTGGAAGAAATGAACCAGCACGAGGAACACAG...ATAGAGGAAACTGGCTTCAGGATTCTCGGTGAAAAAGATGATATTTGTAAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223319.2 |
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| 3UTR-3UTR TCA 90 bp | ACCACCAATACACATATACATGGTATAAGAAAAACCGCAGACCCTTTTCAGATCTTGCTTTATTGCATTTaGATAATCCTGCTCGATGCG | + |
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Preference number: 2 (lower is better) Translates to: TTNTHIHGIRKTADPFQILLYCI*IILLDA Trigger: CGCATCGAGCAGGATTATTCAAATGCAATAAAGCAA...GATCTGAAAAGGGTCTGCGGTTTTTCTTATACCATGTATATGTGTATTGGTGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051784.10 ENSMUST00000221640.2 ENSMUST00000223319.2 |
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| 3UTR CCA 72 bp | CGCTGTGGCCCATCAATACACAGCGCCACCCTTTTGTaGATATCCTCATCCACTGTACACGGCAATACAAAT | + |
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Preference number: 3 (lower is better) Translates to: RCGPSIHSATLL*ISSSTVHGNTN Trigger: ATTTGTATTGCCGTGTACAGTGGATGAGGATATCCACAAAAGGGTGGCGCTGTGTATTGATGGGCCACAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223319.2 |
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| 3UTR TCA 72 bp | CTCTCTTACAAATATCATCTTTTTCACCGAGAATCCTaGAGCCAGTTTCCTCTATTACCAGTGGACAGCGGA | + |
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Preference number: 3 (lower is better) Translates to: LSYKYHLFHRES*SQFPLLPVDSG Trigger: TCCGCTGTCCACTGGTAATAGAGGAAACTGGCTTCAGGATTCTCGGTGAAAAAGATGATATTTGTAAGAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223319.2 |
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| 3UTR CCA 72 bp | TCAGATCCCAAGTCTGTAAACATAATTTCCATAGAGTaGCTAATTCACAGATTAAACTGTCTCTCTTACAAA | + |
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Preference number: 3 (lower is better) Translates to: SDPKSVNIISIE*LIHRLNCLSYK Trigger: TTTGTAAGAGAGACAGTTTAATCTGTGAATTAGCCACTCTATGGAAATTATGTTTACAGACTTGGGATCTGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051784.10 ENSMUST00000221640.2 ENSMUST00000223319.2 |
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| CDS-3UTR TCA 90 bp | CGCCACCCTTTTGTGGATATCCTCATCCACTGTACACGGCAATACAAATCCATCGGCTCGCCCACGGGATaGAAGTCATTTCCCTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: RHPFVDILIHCTRQYKSIGSPTG*KSFPFS Trigger: AGAAAAGGGAAATGACTTTCATCCCGTGGGCGAGCC...GATGGATTTGTATTGCCGTGTACAGTGGATGAGGATATCCACAAAAGGGTGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223319.2 |
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| CDS-3UTR CCA 90 bp | AGAAAGGAAAAATCCCTCAACAACACTATCTTCCTGTGTTCCTCGTGCTGGTTCAGACTCTGTCCTGGCTaGTTCCATTCCTGCGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKEKSLNNTIFLCSSCWFRLCPG*FHSCAW Trigger: CCAGGCGCAGGAATGGAACCAGCCAGGACAGAGTCT...GAACCAGCACGAGGAACACAGGAAGATAGTGTTGTTGAGGGATTTTTCCTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223319.2 |
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| CDS-3UTR GCA 90 bp | TCCACAATGCCTTTATCAGAGGGCCGAGGCTATAGTGTAGTAATAGGGCGTCAAAAGTTGGGTCAGCTGTaGCAGGCTCAATCTGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: STMPLSEGRGYSVVIGRQKLGQL*QAQSVQ Trigger: TTGGACAGATTGAGCCTGGCACAGCTGACCCAACTT...TTGACGCCCTATTACTACACTATAGCCTCGGCCCTCTGATAAAGGCATTGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222685.2 |
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| CDS-3UTR CCA 90 bp | GCCACCCTTTTGTGGATATCCTCATCCACTGTACACGGCAATACAAATCCATCTGAGGTTAGGAAAAGTTaGGTCAGCTGTGCCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: ATLLWISSSTVHGNTNPSEVRKS*VSCARL Trigger: GAGCCTGGCACAGCTGACCCAACTTTTCCTAACCTC...AGATGGATTTGTATTGCCGTGTACAGTGGATGAGGATATCCACAAAAGGGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223319.2 |
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| CDS-3UTR GCA 90 bp | AACTTCAACATCTGGCAAAAGAAAGGAAAAATCCCTCAACAACACTATCTTCCTGGCTGGTTCCATTCCTaGGCCTGGGAGGACCATGGC | + |
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Preference number: 4 (lower is better) Translates to: NFNIWQKKGKIPQQHYLPGWFHS*AWEDHG Trigger: GCCATGGTCCTCCCAGGCGCAGGAATGGAACCAGCC...AGGAAGATAGTGTTGTTGAGGGATTTTTCCTTTCTTTTGCCAGATGTTGAAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223319.2 |
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| CDS-3UTR CCA 90 bp | CACCAATACACATATACATGGTATAAGAAAAACCGCAGACCCTTTTCAGATCCCAGACTCTGTCCTGGCTaGTTCCATTCCTGCGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: HQYTYTWYKKNRRPFSDPRLCPG*FHSCAW Trigger: CCAGGCGCAGGAATGGAACCAGCCAGGACAGAGTCT...GGGATCTGAAAAGGGTCTGCGGTTTTTCTTATACCATGTATATGTGTATTGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR CCA 90 bp | ACCCTTTTGTGGATATCCTCATCCACTGTACACGGCAATACAAATCCATCTTCACTCCAGCACTCCTTCTaGCAGCCTTTGCTCACCATC | + |
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Preference number: 4 (lower is better) Translates to: TLLWISSSTVHGNTNPSSLQHSF*QPLLTI Trigger: GATGGTGAGCAAAGGCTGCCAGAAGGAGTGCTGGAG...TGAAGATGGATTTGTATTGCCGTGTACAGTGGATGAGGATATCCACAAAAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223319.2 |
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| CDS-3UTR TCA 90 bp | CAACACTATCTTCCTGTGTTCCTCGTGCTGGTTCATTTCTTCCACAATGCCTTTCAAAGAATGGACTTATaGCAAAAGGCCCTCCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: QHYLPVFLVLVHFFHNAFQRMDL*QKALRR Trigger: CCTGCGGAGGGCCTTTTGTCATAAGTCCATTCTTTG...AAAGGCATTGTGGAAGAAATGAACCAGCACGAGGAACACAGGAAGATAGTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223319.2 |
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| CDS-3UTR TCA 90 bp | CAACACTATCTTCCTGTGTTCCTCGTGCTGGTTCATTTCTTCCACAATGCCTTTCTATCTCACAGATCCTaGGTAGAGCTGCCATTGCCA | + |
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Preference number: 4 (lower is better) Translates to: QHYLPVFLVLVHFFHNAFLSHRS*VELPLP Trigger: TGGCAATGGCAGCTCTACTCAGGATCTGTGAGATAG...AAAGGCATTGTGGAAGAAATGAACCAGCACGAGGAACACAGGAAGATAGTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223319.2 |
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| CDS-3UTR TCA 90 bp | GAAAGGAAAAATCCCTCAACAACACTATCTTCCTGTGTTCCTCGTGCTGGTTCATTACCTTGCAGCCGCTaGAGGAAAAAGGGGCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: ERKNPSTTLSSCVPRAGSLPCSR*RKKGLN Trigger: ATTCAGCCCCTTTTTCCTTCAGCGGCTGCAAGGTAA...TGAACCAGCACGAGGAACACAGGAAGATAGTGTTGTTGAGGGATTTTTCCTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000223319.2 |
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| CDS-3UTR TCA 90 bp | TCTTCCACAATGCCTTTATCAGAGGGCCGAGGCTATAGTGTAGTAATAGGGCGTCAATCTGTCCAAATATaGCTCTTTACCTTGCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSTMPLSEGRGYSVVIGRQSVQI*LFTLQP Trigger: CGGCTGCAAGGTAAAGAGTCATATTTGGACAGATTG...ACGCCCTATTACTACACTATAGCCTCGGCCCTCTGATAAAGGCATTGTGGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222685.2 |
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| CDS-3UTR GCA 90 bp | CCCAAGTCTGTAAACATAATTTCCATAGAGTGGCTAATTCACAGATTAAACTGTGGCTGGTTCCATTCCTaGGCCTGGGAGGACCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: PKSVNIISIEWLIHRLNCGWFHS*AWEDHG Trigger: GCCATGGTCCTCCCAGGCGCAGGAATGGAACCAGCC...ACAGTTTAATCTGTGAATTAGCCACTCTATGGAAATTATGTTTACAGACTTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR GCA 90 bp | ACACATATACATGGTATAAGAAAAACCGCAGACCCTTTTCAGATCCCAAGTCTGTATAAGCAGTGGGAGTaGGTGAGTCTGGTCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: THIHGIRKTADPFQIPSLYKQWE*VSLVQG Trigger: GCCCTGGACCAGACTCACGCACTCCCACTGCTTATA...CAGACTTGGGATCTGAAAAGGGTCTGCGGTTTTTCTTATACCATGTATATGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR GCA 90 bp | CTTTTGTGGATATCCTCATCCACTGTACACGGCAATACAAATCCATCTTCATCTGAATCCGTTTCCTGCTaGAGTACCCCATCACGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LLWISSSTVHGNTNPSSSESVSC*STPSRS Trigger: GCTCCGTGATGGGGTACTGCAGCAGGAAACGGATTC...AGATGAAGATGGATTTGTATTGCCGTGTACAGTGGATGAGGATATCCACAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223319.2 |
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| CDS-3UTR TCA 90 bp | TTCCAAGTAAGTGTTTACTGTCCAAGCAAAATCGCTGTGGCCCATCAATACACATCTTCATCCTCGTTTTaGAGACTCTGTCCTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: FQVSVYCPSKIAVAHQYTSSSSF*RLCPGW Trigger: CCAGCCAGGACAGAGTCTTCAAAACGAGGATGAAGA...TGTGTATTGATGGGCCACAGCGATTTTGCTTGGACAGTAAACACTTACTTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223319.2 |
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| CDS-3UTR GCA 90 bp | TCTCTCTTACAAATATCATCTTTTTCACCGAGAATCCTGAAGCCAGTTTCCTCTGAATCCGTTTCCTGCTaGAGTACCCCATCACGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SLLQISSFSPRILKPVSSESVSC*STPSRS Trigger: GCTCCGTGATGGGGTACTGCAGCAGGAAACGGATTC...AGAGGAAACTGGCTTCAGGATTCTCGGTGAAAAAGATGATATTTGTAAGAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR CCA 90 bp | ACCACCAATACACATATACATGGTATAAGAAAAACCGCAGACCCTTTTCAGATCCTCCAGCACTCCTTCTaGCAGCCTTTGCTCACCATC | + |
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Preference number: 4 (lower is better) Translates to: TTNTHIHGIRKTADPFQILQHSF*QPLLTI Trigger: GATGGTGAGCAAAGGCTGCCAGAAGGAGTGCTGGAG...GATCTGAAAAGGGTCTGCGGTTTTTCTTATACCATGTATATGTGTATTGGTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR CCA 90 bp | ACCAATACACATATACATGGTATAAGAAAAACCGCAGACCCTTTTCAGATCCCACTTTGGAGACGACGTTaGCATTCTGCCACCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: TNTHIHGIRKTADPFQIPLWRRR*HSATRL Trigger: GAGCCTGGTGGCAGAATGCCAACGTCGTCTCCAAAG...TGGGATCTGAAAAGGGTCTGCGGTTTTTCTTATACCATGTATATGTGTATTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR CCA 90 bp | ACACATATACATGGTATAAGAAAAACCGCAGACCCTTTTCAGATCCCAAGTCTGGAGGTTAGGAAAAGTTaGGTCAGCTGTGCCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: THIHGIRKTADPFQIPSLEVRKS*VSCARL Trigger: GAGCCTGGCACAGCTGACCCAACTTTTCCTAACCTC...CAGACTTGGGATCTGAAAAGGGTCTGCGGTTTTTCTTATACCATGTATATGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR CCA 90 bp | TTCATTTCTTCCACAATGCCTTTATCAGAGGGCCGAGGCTATAGTGTAGTAATAGAGGTTAGGAAAAGTTaGGTCAGCTGTGCCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: FISSTMPLSEGRGYSVVIEVRKS*VSCARL Trigger: GAGCCTGGCACAGCTGACCCAACTTTTCCTAACCTC...TATTACTACACTATAGCCTCGGCCCTCTGATAAAGGCATTGTGGAAGAAATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222685.2 |
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| CDS-3UTR TCA 90 bp | ACCAATACACATATACATGGTATAAGAAAAACCGCAGACCCTTTTCAGATCCCAGGCTCGCCCACGGGATaGAAGTCATTTCCCTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: TNTHIHGIRKTADPFQIPGSPTG*KSFPFS Trigger: AGAAAAGGGAAATGACTTTCATCCCGTGGGCGAGCC...TGGGATCTGAAAAGGGTCTGCGGTTTTTCTTATACCATGTATATGTGTATTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR TCA 90 bp | TACACATATACATGGTATAAGAAAAACCGCAGACCCTTTTCAGATCCCAAGTCTGGCAATCTGACTAGGTaGAAGTCTGTCCCACTGGCA | + |
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Preference number: 4 (lower is better) Translates to: YTYTWYKKNRRPFSDPKSGNLTR*KSVPLA Trigger: TGCCAGTGGGACAGACTTTCACCTAGTCAGATTGCC...AGACTTGGGATCTGAAAAGGGTCTGCGGTTTTTCTTATACCATGTATATGTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR CCA 90 bp | AACTTCAACATCTGGCAAAAGAAAGGAAAAATCCCTCAACAACACTATCTTCCTCTTTGGAGACGACGTTaGCATTCTGCCACCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: NFNIWQKKGKIPQQHYLPLWRRR*HSATRL Trigger: GAGCCTGGTGGCAGAATGCCAACGTCGTCTCCAAAG...AGGAAGATAGTGTTGTTGAGGGATTTTTCCTTTCTTTTGCCAGATGTTGAAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223319.2 |
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| CDS-3UTR CCA 90 bp | TCTCTCTTACAAATATCATCTTTTTCACCGAGAATCCTGAAGCCAGTTTCCTCTTCGCACCTTGAAGCATaGCCAGACTTTCCCCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: SLLQISSFSPRILKPVSSSHLEA*PDFPQG Trigger: TCCTTGGGGAAAGTCTGGCCATGCTTCAAGGTGCGA...AGAGGAAACTGGCTTCAGGATTCTCGGTGAAAAAGATGATATTTGTAAGAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR CCA 90 bp | CAATACACATATACATGGTATAAGAAAAACCGCAGACCCTTTTCAGATCCCAAGCGTCGAAGATGGGCTTaGAGAGAATCCGTTTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: QYTYTWYKKNRRPFSDPKRRRWA*RESVSC Trigger: GCAGGAAACGGATTCTCTCCAAGCCCATCTTCGACG...CTTGGGATCTGAAAAGGGTCTGCGGTTTTTCTTATACCATGTATATGTGTATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR CCA 90 bp | TCTCTCTTACAAATATCATCTTTTTCACCGAGAATCCTGAAGCCAGTTTCCTCTCGTCGAAGATGGGCTTaGAGAGAATCCGTTTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SLLQISSFSPRILKPVSSRRRWA*RESVSC Trigger: GCAGGAAACGGATTCTCTCCAAGCCCATCTTCGACG...AGAGGAAACTGGCTTCAGGATTCTCGGTGAAAAAGATGATATTTGTAAGAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR TCA 90 bp | ACCAATACACATATACATGGTATAAGAAAAACCGCAGACCCTTTTCAGATCCCATCTTCATCCTCGTTTTaGAGACTCTGTCCTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: TNTHIHGIRKTADPFQIPSSSSF*RLCPGW Trigger: CCAGCCAGGACAGAGTCTTCAAAACGAGGATGAAGA...TGGGATCTGAAAAGGGTCTGCGGTTTTTCTTATACCATGTATATGTGTATTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR TCA 90 bp | TACACATATACATGGTATAAGAAAAACCGCAGACCCTTTTCAGATCCCAAGTCTAGCATCAGGCTACTTTaGGGATCTGCAGGCAACAAC | + |
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Preference number: 4 (lower is better) Translates to: YTYTWYKKNRRPFSDPKSSIRLL*GSAGNN Trigger: GTTGTTGCCTGCAGATCCTCAAAGTAGCCTGATGCT...AGACTTGGGATCTGAAAAGGGTCTGCGGTTTTTCTTATACCATGTATATGTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR TCA 90 bp | TCTCTTACAAATATCATCTTTTTCACCGAGAATCCTGAAGCCAGTTTCCTCTATGGCAATCTGACTAGGTaGAAGTCTGTCCCACTGGCA | + |
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Preference number: 4 (lower is better) Translates to: SLTNIIFFTENPEASFLYGNLTR*KSVPLA Trigger: TGCCAGTGGGACAGACTTTCACCTAGTCAGATTGCC...ATAGAGGAAACTGGCTTCAGGATTCTCGGTGAAAAAGATGATATTTGTAAGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223319.2 |
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| CDS-3UTR TCA 90 bp | GAAAAACCGCAGACCCTTTTCAGATCCCAAGTCTGTAAACATAATTTCCATAGATTACCTTGCAGCCGCTaGAGGAAAAAGGGGCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: EKPQTLFRSQVCKHNFHRLPCSR*RKKGLN Trigger: ATTCAGCCCCTTTTTCCTTCAGCGGCTGCAAGGTAA...TCTATGGAAATTATGTTTACAGACTTGGGATCTGAAAAGGGTCTGCGGTTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR TCA 90 bp | GCGTCAACACCTTTGAAGCAAAATACAGTCTTGATCCTAAAAGATCAATCAGTCTTACCTTGCAGCCGCTaGAGGAAAAAGGGGCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: ASTPLKQNTVLILKDQSVLPCSR*RKKGLN Trigger: ATTCAGCCCCTTTTTCCTTCAGCGGCTGCAAGGTAA...GACTGATTGATCTTTTAGGATCAAGACTGTATTTTGCTTCAAAGGTGTTGACGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000222685.2 |
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| CDS-3UTR GCA 90 bp | TCAGATCCCAAGTCTGTAAACATAATTTCCATAGAGTGGCTAATTCACAGATTATATAAGCAGTGGGAGTaGGTGAGTCTGGTCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: SDPKSVNIISIEWLIHRLYKQWE*VSLVQG Trigger: GCCCTGGACCAGACTCACGCACTCCCACTGCTTATA...TAATCTGTGAATTAGCCACTCTATGGAAATTATGTTTACAGACTTGGGATCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR GCA 90 bp | CAATACACATATACATGGTATAAGAAAAACCGCAGACCCTTTTCAGATCCCAAGAAGTTGGGTCAGCTGTaGCAGGCTCAATCTGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: QYTYTWYKKNRRPFSDPKKLGQL*QAQSVQ Trigger: TTGGACAGATTGAGCCTGGCACAGCTGACCCAACTT...CTTGGGATCTGAAAAGGGTCTGCGGTTTTTCTTATACCATGTATATGTGTATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR GCA 90 bp | ACCAATACACATATACATGGTATAAGAAAAACCGCAGACCCTTTTCAGATCCCAAAGTTGGGTCAGCTGTaGCAGGCTCAATCTGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: TNTHIHGIRKTADPFQIPKLGQL*QAQSVQ Trigger: TTGGACAGATTGAGCCTGGCACAGCTGACCCAACTT...TGGGATCTGAAAAGGGTCTGCGGTTTTTCTTATACCATGTATATGTGTATTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR CCA 90 bp | ACTGTCTCTCTTACAAATATCATCTTTTTCACCGAGAATCCTGAAGCCAGTTTCCCAAGGACACAAAGATaGTGGACTTCGAGGTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: TVSLTNIIFFTENPEASFPRTQR*WTSRLP Trigger: AGGCAACCTCGAAGTCCACCATCTTTGTGTCCTTGG...GAAACTGGCTTCAGGATTCTCGGTGAAAAAGATGATATTTGTAAGAGAGACAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR TCA 90 bp | ACACATATACATGGTATAAGAAAAACCGCAGACCCTTTTCAGATCCCAAGTCTGCAATCTGTCCAAATATaGCTCTTTACCTTGCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: THIHGIRKTADPFQIPSLQSVQI*LFTLQP Trigger: CGGCTGCAAGGTAAAGAGTCATATTTGGACAGATTG...CAGACTTGGGATCTGAAAAGGGTCTGCGGTTTTTCTTATACCATGTATATGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS-3UTR TCA 90 bp | TACACATATACATGGTATAAGAAAAACCGCAGACCCTTTTCAGATCCCAAGTCTTGGACAGCGGAGCTTTaGGAAAACAGCTTCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YTYTWYKKNRRPFSDPKSWTAEL*ENSFLC Trigger: ACAAAGGAAGCTGTTTTCTCAAAGCTCCGCTGTCCA...AGACTTGGGATCTGAAAAGGGTCTGCGGTTTTTCTTATACCATGTATATGTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000221640.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTCTTACAAATATCATCTTTTTCACCGAGAATCCTGAAGCCAGTTTCCTCTGCTACTTTGAGGATCTaGAGGCAACAACGTAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLQISSFSPRILKPVSSATLRI*RQQRKQ Trigger: CTGCTTACGTTGTTGCCTGCAGATCCTCAAAGTAGC...AGAGGAAACTGGCTTCAGGATTCTCGGTGAAAAAGATGATATTTGTAAGAGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS-3UTR CCA 90 bp | CCCAAGTCTGTAAACATAATTTCCATAGAGTGGCTAATTCACAGATTAAACTGTTTGAAGACTCTGTCCTaGCTGGTTCCATTCCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PKSVNIISIEWLIHRLNCLKTLS*LVPFLR Trigger: GCGCAGGAATGGAACCAGCCAGGACAGAGTCTTCAA...ACAGTTTAATCTGTGAATTAGCCACTCTATGGAAATTATGTTTACAGACTTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS-3UTR CCA 90 bp | TCAGATCCCAAGTCTGTAAACATAATTTCCATAGAGTGGCTAATTCACAGATTATCGCACCTTGAAGCATaGCCAGACTTTCCCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SDPKSVNIISIEWLIHRLSHLEA*PDFPQG Trigger: TCCTTGGGGAAAGTCTGGCCATGCTTCAAGGTGCGA...TAATCTGTGAATTAGCCACTCTATGGAAATTATGTTTACAGACTTGGGATCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS-3UTR TCA 90 bp | TCAGATCCCAAGTCTGTAAACATAATTTCCATAGAGTGGCTAATTCACAGATTACAAAGAATGGACTTATaGCAAAAGGCCCTCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SDPKSVNIISIEWLIHRLQRMDL*QKALRR Trigger: CCTGCGGAGGGCCTTTTGTCATAAGTCCATTCTTTG...TAATCTGTGAATTAGCCACTCTATGGAAATTATGTTTACAGACTTGGGATCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS-3UTR TCA 90 bp | ACACATATACATGGTATAAGAAAAACCGCAGACCCTTTTCAGATCCCAAGTCTGTTTTTACAGTATGCGTaGTGGAATCTGACCCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: THIHGIRKTADPFQIPSLFLQYA*WNLTLN Trigger: GTTCAGGGTCAGATTCCATCACGCATACTGTAAAAA...CAGACTTGGGATCTGAAAAGGGTCTGCGGTTTTTCTTATACCATGTATATGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGATCCCAAGTCTGTAAACATAATTTCCATAGAGTGGCTAATTCACAGATTCTATCTCACAGATCCTaGGTAGAGCTGCCATTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FRSQVCKHNFHRVANSQILSHRS*VELPLP Trigger: TGGCAATGGCAGCTCTACTCAGGATCTGTGAGATAG...AATCTGTGAATTAGCCACTCTATGGAAATTATGTTTACAGACTTGGGATCTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS-3UTR TCA 90 bp | CCCAAGTCTGTAAACATAATTTCCATAGAGTGGCTAATTCACAGATTAAACTGTAGCATCAGGCTACTTTaGGGATCTGCAGGCAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: PKSVNIISIEWLIHRLNCSIRLL*GSAGNN Trigger: GTTGTTGCCTGCAGATCCTCAAAGTAGCCTGATGCT...ACAGTTTAATCTGTGAATTAGCCACTCTATGGAAATTATGTTTACAGACTTGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS-3UTR TCA 90 bp | ACCACCAATACACATATACATGGTATAAGAAAAACCGCAGACCCTTTTCAGATCCAATCTGTCCAAATATaGCTCTTTACCTTGCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TTNTHIHGIRKTADPFQIQSVQI*LFTLQP Trigger: CGGCTGCAAGGTAAAGAGTCATATTTGGACAGATTG...GATCTGAAAAGGGTCTGCGGTTTTTCTTATACCATGTATATGTGTATTGGTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS-3UTR GCA 90 bp | AACTTCAACATCTGGCAAAAGAAAGGAAAAATCCCTCAACAACACTATCTTCCTGCTACTTTGAGGATCTaGAGGCAACAACGTAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NFNIWQKKGKIPQQHYLPATLRI*RQQRKQ Trigger: CTGCTTACGTTGTTGCCTGCAGATCCTCAAAGTAGC...AGGAAGATAGTGTTGTTGAGGGATTTTTCCTTTCTTTTGCCAGATGTTGAAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223319.2 |
||
| CDS-3UTR CCA 90 bp | GTCTGTAAACATAATTTCCATAGAGTGGCTAATTCACAGATTAAACTGTCTCTCCCAAGGACACAAAGATaGTGGACTTCGAGGTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VCKHNFHRVANSQIKLSLPRTQR*WTSRLP Trigger: AGGCAACCTCGAAGTCCACCATCTTTGTGTCCTTGG...GAGAGACAGTTTAATCTGTGAATTAGCCACTCTATGGAAATTATGTTTACAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS-3UTR TCA 90 bp | AACTTCAACATCTGGCAAAAGAAAGGAAAAATCCCTCAACAACACTATCTTCCTTTGGTGGCACGTAATTaGGCTTTCCAAATGGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: NFNIWQKKGKIPQQHYLPLVARN*AFQMAQ Trigger: TTGAGCCATTTGGAAAGCTCAATTACGTGCCACCAA...AGGAAGATAGTGTTGTTGAGGGATTTTTCCTTTCTTTTGCCAGATGTTGAAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223319.2 |
||
| CDS-3UTR TCA 90 bp | CCCAAGTCTGTAAACATAATTTCCATAGAGTGGCTAATTCACAGATTAAACTGTTGGACAGCGGAGCTTTaGGAAAACAGCTTCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PKSVNIISIEWLIHRLNCWTAEL*ENSFLC Trigger: ACAAAGGAAGCTGTTTTCTCAAAGCTCCGCTGTCCA...ACAGTTTAATCTGTGAATTAGCCACTCTATGGAAATTATGTTTACAGACTTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000221640.2 |
||
| CDS-3UTR TCA 90 bp | TCAGATCCCAAGTCTGTAAACATAATTTCCATAGAGTGGCTAATTCACAGATTATTGGTGGCACGTAATTaGGCTTTCCAAATGGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SDPKSVNIISIEWLIHRLLVARN*AFQMAQ Trigger: TTGAGCCATTTGGAAAGCTCAATTACGTGCCACCAA...TAATCTGTGAATTAGCCACTCTATGGAAATTATGTTTACAGACTTGGGATCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS-3UTR GCA 90 bp | GAAAAACCGCAGACCCTTTTCAGATCCCAAGTCTGTAAACATAATTTCCATAGAGAAGTTTTTACAGTATaGGTGATGGAATCTGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: EKPQTLFRSQVCKHNFHREVFTV*VMESDP Trigger: AGGGTCAGATTCCATCACGCATACTGTAAAAACTTC...TCTATGGAAATTATGTTTACAGACTTGGGATCTGAAAAGGGTCTGCGGTTTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS-3UTR CCA 90 bp | ACCCTTTTGTGGATATCCTCATCCACTGTACACGGCAATACAAATCCATCTTCAAGGGAACTACTGAAATaGAGAAGTTGTTTAATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TLLWISSSTVHGNTNPSSRELLK*RSCLMC Trigger: ACACATTAAACAACTTCTCCATTTCAGTAGTTCCCT...TGAAGATGGATTTGTATTGCCGTGTACAGTGGATGAGGATATCCACAAAAGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223319.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGATCCCAAGTCTGTAAACATAATTTCCATAGAGTGGCTAATTCACAGATTTTTTTACAGTATGCGTaGTGGAATCTGACCCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FRSQVCKHNFHRVANSQIFLQYA*WNLTLN Trigger: GTTCAGGGTCAGATTCCATCACGCATACTGTAAAAA...AATCTGTGAATTAGCCACTCTATGGAAATTATGTTTACAGACTTGGGATCTGAA 38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS-3UTR TCA 90 bp | CAATACACATATACATGGTATAAGAAAAACCGCAGACCCTTTTCAGATCCCAAGGTCATTTCCCTTTTCTaGGTGGAAGTTTTTACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QYTYTWYKKNRRPFSDPKVISLF*VEVFTV Trigger: TACTGTAAAAACTTCCACTCAGAAAAGGGAAATGAC...CTTGGGATCTGAAAAGGGTCTGCGGTTTTTCTTATACCATGTATATGTGTATTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGATCCCAAGTCTGTAAACATAATTTCCATAGAGTGGCTAATTCACAGATTAACGTAAGCAGAGATTaGAAAGCTGTCACCAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: FRSQVCKHNFHRVANSQINVSRD*KAVTKP Trigger: TGGTTTGGTGACAGCTTTGCAATCTCTGCTTACGTT...AATCTGTGAATTAGCCACTCTATGGAAATTATGTTTACAGACTTGGGATCTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS-3UTR CCA 90 bp | ACATGGTATAAGAAAAACCGCAGACCCTTTTCAGATCCCAAGTCTGTAAACATATTTCCCTTTTCTGAGTaGAAGTTTTTACAGTATGCG | + |
|
Preference number: 4 (lower is better) Translates to: TWYKKNRRPFSDPKSVNIFPFSE*KFLQYA Trigger: CGCATACTGTAAAAACTTCCACTCAGAAAAGGGAAA...TATGTTTACAGACTTGGGATCTGAAAAGGGTCTGCGGTTTTTCTTATACCATGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS-3UTR GCA 90 bp | CCCAAGTCTGTAAACATAATTTCCATAGAGTGGCTAATTCACAGATTAAACTGTGAAGTTTTTACAGTATaGGTGATGGAATCTGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PKSVNIISIEWLIHRLNCEVFTV*VMESDP Trigger: AGGGTCAGATTCCATCACGCATACTGTAAAAACTTC...ACAGTTTAATCTGTGAATTAGCCACTCTATGGAAATTATGTTTACAGACTTGGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTCTTACAAATATCATCTTTTTCACCGAGAATCCTGAAGCCAGTTTCCTCTGTGTTTAAGAACATCTaGTGTTTGTCTACTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLLQISSFSPRILKPVSSVFKNI*CLSTSS Trigger: TGAAGAAGTAGACAAACACCAGATGTTCTTAAACAC...AGAGGAAACTGGCTTCAGGATTCTCGGTGAAAAAGATGATATTTGTAAGAGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS-3UTR CCA 90 bp | TCAGATCCCAAGTCTGTAAACATAATTTCCATAGAGTGGCTAATTCACAGATTATTTCCCTTTTCTGAGTaGAAGTTTTTACAGTATGCG | + |
|
Preference number: 4 (lower is better) Translates to: SDPKSVNIISIEWLIHRLFPFSE*KFLQYA Trigger: CGCATACTGTAAAAACTTCCACTCAGAAAAGGGAAA...TAATCTGTGAATTAGCCACTCTATGGAAATTATGTTTACAGACTTGGGATCTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS-3UTR CCA 90 bp | CAGATTAAACTGTCTCTCTTACAAATATCATCTTTTTCACCGAGAATCCTGAAGGTGTTTAAGAACATCTaGTGTTTGTCTACTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QIKLSLLQISSFSPRILKVFKNI*CLSTSS Trigger: TGAAGAAGTAGACAAACACCAGATGTTCTTAAACAC...CTTCAGGATTCTCGGTGAAAAAGATGATATTTGTAAGAGAGACAGTTTAATCTG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS-3UTR CCA 90 bp | CCCAAGTCTGTAAACATAATTTCCATAGAGTGGCTAATTCACAGATTAAACTGTAGGGAACTACTGAAATaGAGAAGTTGTTTAATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PKSVNIISIEWLIHRLNCRELLK*RSCLMC Trigger: ACACATTAAACAACTTCTCCATTTCAGTAGTTCCCT...ACAGTTTAATCTGTGAATTAGCCACTCTATGGAAATTATGTTTACAGACTTGGG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS CCA 90 bp | GCTTGGAGAGAATCCGTTTCCTGCTGCAGTACCCCATCACGGAGCTaGCCACAGCGGGGTCCAGGGAGAAGCACAGGGCGGACACATGTT | + |
|
Preference number: 5 (lower is better) Translates to: AWRESVSCCSTPSRS*PQRGPGRSTGRTHV Trigger: AACATGTGTCCGCCCTGTGCTTCTCCCTGGACCCCGCTGTGGCCAGCTCCGTGATGGGGTACTGCAGCAGGAAACGGATTCTCTCCAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS GCA 90 bp | CTGAGACTACGTCGAAGATGGGCTTGGAGAGAATCCGTTTCCTGCTaGAGTACCCCATCACGGAGCTGGCCACAGCGGGGTCCAGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LRLRRRWAWRESVSC*STPSRSWPQRGPGR Trigger: TCTCCCTGGACCCCGCTGTGGCCAGCTCCGTGATGGGGTACTGCAGCAGGAAACGGATTCTCTCCAAGCCCATCTTCGACGTAGTCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS CCA 90 bp | TTGGTCAGGTGTGAGGGGTCTCGCTCACACCGGAGGCAAAGAGCCTaGAAGGCACGGTTCTCCAGCACTCCTTCTGGCAGCCTTTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LVRCEGSRSHRRQRA*KARFSSTPSGSLCS Trigger: TGAGCAAAGGCTGCCAGAAGGAGTGCTGGAGAACCGTGCCTTCCAGGCTCTTTGCCTCCGGTGTGAGCGAGACCCCTCACACCTGACCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS GCA 90 bp | AGAGCCTGGAAGGCACGGTTCTCCAGCACTCCTTCTGGCAGCCTTTaGTCACCATCCCTCCTCCCTATCTCACAGATCCTGAGTAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RAWKARFSSTPSGSL*SPSLLPISQILSRA Trigger: AGCTCTACTCAGGATCTGTGAGATAGGGAGGAGGGATGGTGAGCAAAGGCTGCCAGAAGGAGTGCTGGAGAACCGTGCCTTCCAGGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS GCA 90 bp | TGGCCAGACTTTCCCCAAGGACACAAAGATGGTGGACTTCGAGGTTaGCTCTTTGGAGACGACGTTGGCATTCTGCCACCAGGCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: WPDFPQGHKDGGLRG*LFGDDVGILPPGSA Trigger: TGCTGAGCCTGGTGGCAGAATGCCAACGTCGTCTCCAAAGAGGCAACCTCGAAGTCCACCATCTTTGTGTCCTTGGGGAAAGTCTGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS CCA 90 bp | CCCACTGGCAAACAACGATCTCTGAGACTACGTCGAAGATGGGCTTaGAGAGAATCCGTTTCCTGCTGCAGTACCCCATCACGGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PTGKQRSLRLRRRWA*RESVSCCSTPSRSW Trigger: CCAGCTCCGTGATGGGGTACTGCAGCAGGAAACGGATTCTCTCCAAGCCCATCTTCGACGTAGTCTCAGAGATCGTTGTTTGCCAGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS GCA 90 bp | ATGGTGGACTTCGAGGTTGCCTCTTTGGAGACGACGTTGGCATTCTaGCACCAGGCTCAGCATCAGGCTACTTTGAGGATCTGCAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: MVDFEVASLETTLAF*HQAQHQATLRICRQ Trigger: TTGCCTGCAGATCCTCAAAGTAGCCTGATGCTGAGCCTGGTGGCAGAATGCCAACGTCGTCTCCAAAGAGGCAACCTCGAAGTCCACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS CCA 90 bp | CTTTCCCCAAGGACACAAAGATGGTGGACTTCGAGGTTGCCTCTTTaGAGACGACGTTGGCATTCTGCCACCAGGCTCAGCATCAGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LSPRTQRWWTSRLPL*RRRWHSATRLSIRL Trigger: TAGCCTGATGCTGAGCCTGGTGGCAGAATGCCAACGTCGTCTCCAAAGAGGCAACCTCGAAGTCCACCATCTTTGTGTCCTTGGGGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS CCA 90 bp | GACGGACAACCAGCTTCAGGGTCTCACAACTCGCACCTTGAAGCATaGCCAGACTTTCCCCAAGGACACAAAGATGGTGGACTTCGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: DGQPASGSHNSHLEA*PDFPQGHKDGGLRG Trigger: ACCTCGAAGTCCACCATCTTTGTGTCCTTGGGGAAAGTCTGGCCATGCTTCAAGGTGCGAGTTGTGAGACCCTGAAGCTGGTTGTCCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS TCA 90 bp | ACAGCTCAGGTTGTAGGGAGCAGAAGCACACACTCAGGCGATCTGTaGCTGCCTTTGGGGCATGACTGGCAGGGTGAATTTTCAGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TAQVVGSRSTHSGDL*LPLGHDWQGEFSEQ Trigger: TTGCTCTGAAAATTCACCCTGCCAGTCATGCCCCAAAGGCAGTCACAGATCGCCTGAGTGTGTGCTTCTGCTCCCTACAACCTGAGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000051784.10 ENSMUST00000222631.2 ENSMUST00000222660.2 ENSMUST00000223187.2 ENSMUST00000223319.2 |
||
| CDS TCA 90 bp | CCAGGGAGAAGCACAGGGCGGACACATGTTGCTCTAAGGCCTCTGTaGAGAACCTGTCACTGTGTCCGAAATAGACAAACGCCTCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PGRSTGRTHVALRPL*RTCHCVRNRQTPPR Trigger: TCTTGGAGGCGTTTGTCTATTTCGGACACAGTGACAGGTTCTTCACAGAGGCCTTAGAGCAACATGTGTCCGCCCTGTGCTTCTCCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS-3UTR CAA 90 bp | GCTGTGGCCCATCAATACACAGCGCCACCCTTTTGTGGATATCCTCATCCACTGCTCACAACTCGCACCTaGAAGCATGGCCAGACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: AVAHQYTAPPFCGYPHPLLTTRT*KHGQTF Trigger: GAAAGTCTGGCCATGCTTCAAGGTGCGAGTTGTGAG...CAGTGGATGAGGATATCCACAAAAGGGTGGCGCTGTGTATTGATGGGCCACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223319.2 |
||
| CDS TCA 90 bp | TGGTTCCATTCCTGCGCCTGGGAGGACCATGGCTCGCCCACGGGATaGAAGTCATTTCCCTTTTCTGAGTGGAAGTTTTTACAGTATGCG | + |
|
Preference number: 5 (lower is better) Translates to: WFHSCAWEDHGSPTG*KSFPFSEWKFLQYA Trigger: CGCATACTGTAAAAACTTCCACTCAGAAAAGGGAAATGACTTTCATCCCGTGGGCGAGCCATGGTCCTCCCAGGCGCAGGAATGGAACCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051784.10 ENSMUST00000223187.2 ENSMUST00000223319.2 |
||
| CDS TCA 90 bp | AGACGACGTTGGCATTCTGCCACCAGGCTCAGCATCAGGCTACTTTaGGGATCTGCAGGCAACAACGTAAGCAGAGATTGCAAAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RRRWHSATRLSIRLL*GSAGNNVSRDCKAV Trigger: GACAGCTTTGCAATCTCTGCTTACGTTGTTGCCTGCAGATCCTCAAAGTAGCCTGATGCTGAGCCTGGTGGCAGAATGCCAACGTCGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS GCA 90 bp | TTGGCATTCTGCCACCAGGCTCAGCATCAGGCTACTTTGAGGATCTaGAGGCAACAACGTAAGCAGAGATTGCAAAGCTGTCACCAAACC | + |
|
Preference number: 5 (lower is better) Translates to: LAFCHQAQHQATLRI*RQQRKQRLQSCHQT Trigger: GGTTTGGTGACAGCTTTGCAATCTCTGCTTACGTTGTTGCCTGCAGATCCTCAAAGTAGCCTGATGCTGAGCCTGGTGGCAGAATGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS TCA 90 bp | GGAGGACCATGGCTCGCCCACGGGATGAAAGTCATTTCCCTTTTCTaGGTGGAAGTTTTTACAGTATGCGTGATGGAATCTGACCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GGPWLAHGMKVISLF*VEVFTVCVMESDPE Trigger: TTCAGGGTCAGATTCCATCACGCATACTGTAAAAACTTCCACTCAGAAAAGGGAAATGACTTTCATCCCGTGGGCGAGCCATGGTCCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000051784.10 ENSMUST00000222660.2 ENSMUST00000223187.2 ENSMUST00000223319.2 |
||
| CDS-3UTR CAA 90 bp | CACCAATACACATATACATGGTATAAGAAAAACCGCAGACCCTTTTCAGATCCCTCCTTCTGGCAGCCTTaGCTCACCATCCCTCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HQYTYTWYKKNRRPFSDPSFWQP*LTIPPP Trigger: GGGAGGAGGGATGGTGAGCAAAGGCTGCCAGAAGGA...GGGATCTGAAAAGGGTCTGCGGTTTTTCTTATACCATGTATATGTGTATTGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR CAA 90 bp | ACACATATACATGGTATAAGAAAAACCGCAGACCCTTTTCAGATCCCAAGTCTGTCCTTCTGGCAGCCTTaGCTCACCATCCCTCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: THIHGIRKTADPFQIPSLSFWQP*LTIPPP Trigger: GGGAGGAGGGATGGTGAGCAAAGGCTGCCAGAAGGA...CAGACTTGGGATCTGAAAAGGGTCTGCGGTTTTTCTTATACCATGTATATGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR CAA 90 bp | TCTCTCTTACAAATATCATCTTTTTCACCGAGAATCCTGAAGCCAGTTTCCTCTTCTTTGGAGACGACGTaGGCATTCTGCCACCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLLQISSFSPRILKPVSSSLETT*AFCHQA Trigger: AGCCTGGTGGCAGAATGCCAACGTCGTCTCCAAAGA...AGAGGAAACTGGCTTCAGGATTCTCGGTGAAAAAGATGATATTTGTAAGAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR CAA 90 bp | GAAAAACCGCAGACCCTTTTCAGATCCCAAGTCTGTAAACATAATTTCCATAGATCTTTGGAGACGACGTaGGCATTCTGCCACCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: EKPQTLFRSQVCKHNFHRSLETT*AFCHQA Trigger: AGCCTGGTGGCAGAATGCCAACGTCGTCTCCAAAGA...TCTATGGAAATTATGTTTACAGACTTGGGATCTGAAAAGGGTCTGCGGTTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR CAA 90 bp | CTTTTGTGGATATCCTCATCCACTGTACACGGCAATACAAATCCATCTTCATCTACGTCGAAGATGGGCTaGGAGAGAATCCGTTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLWISSSTVHGNTNPSSSTSKMG*ERIRFL Trigger: CAGGAAACGGATTCTCTCCAAGCCCATCTTCGACGT...AGATGAAGATGGATTTGTATTGCCGTGTACAGTGGATGAGGATATCCACAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223319.2 |
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| CDS CCA 90 bp | TTCAGGACACACCTGCAGAATCCTATAAACGGACGTGATCTCCTCTaGAGCAAATGTTTCCACACTTTTACTTTGAAGTTGACGGACAAC | + |
|
Preference number: 5 (lower is better) Translates to: FRTHLQNPINGRDLL*SKCFHTFTLKLTDN Trigger: GTTGTCCGTCAACTTCAAAGTAAAAGTGTGGAAACATTTGCTCCAGAGGAGATCACGTCCGTTTATAGGATTCTGCAGGTGTGTCCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR CAA 90 bp | ACACATATACATGGTATAAGAAAAACCGCAGACCCTTTTCAGATCCCAAGTCTGCAGCATCAGGCTACTTaGAGGATCTGCAGGCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: THIHGIRKTADPFQIPSLQHQAT*RICRQQ Trigger: TTGTTGCCTGCAGATCCTCAAAGTAGCCTGATGCTG...CAGACTTGGGATCTGAAAAGGGTCTGCGGTTTTTCTTATACCATGTATATGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR CAA 90 bp | ACTGTCTCTCTTACAAATATCATCTTTTTCACCGAGAATCCTGAAGCCAGTTTCCTCACAACTCGCACCTaGAAGCATGGCCAGACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TVSLTNIIFFTENPEASFLTTRT*KHGQTF Trigger: GAAAGTCTGGCCATGCTTCAAGGTGCGAGTTGTGAG...GAAACTGGCTTCAGGATTCTCGGTGAAAAAGATGATATTTGTAAGAGAGACAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR CAA 90 bp | AAAAACCGCAGACCCTTTTCAGATCCCAAGTCTGTAAACATAATTTCCATAGAGCAGCATCAGGCTACTTaGAGGATCTGCAGGCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: KNRRPFSDPKSVNIISIEQHQAT*RICRQQ Trigger: TTGTTGCCTGCAGATCCTCAAAGTAGCCTGATGCTG...CTCTATGGAAATTATGTTTACAGACTTGGGATCTGAAAAGGGTCTGCGGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS TCA 90 bp | TGTCTACTTCTTCAGGACACACCTGCAGAATCCTATAAACGGACGTaGTCTCCTCTGGAGCAAATGTTTCCACACTTTTACTTTGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: CLLLQDTPAESYKRT*SPLEQMFPHFYFEV Trigger: AACTTCAAAGTAAAAGTGTGGAAACATTTGCTCCAGAGGAGATCACGTCCGTTTATAGGATTCTGCAGGTGTGTCCTGAAGAAGTAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR CAA 90 bp | TCTCTTACAAATATCATCTTTTTCACCGAGAATCCTGAAGCCAGTTTCCTCTATCTCTTCATCCTCGTTTaGAAGACTCTGTCCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLTNIIFFTENPEASFLYLFILV*KTLSWL Trigger: CAGCCAGGACAGAGTCTTCAAAACGAGGATGAAGAG...ATAGAGGAAACTGGCTTCAGGATTCTCGGTGAAAAAGATGATATTTGTAAGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223319.2 |
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| CDS-3UTR CAA 90 bp | TTCAGATCCCAAGTCTGTAAACATAATTTCCATAGAGTGGCTAATTCACAGATTACGTCGAAGATGGGCTaGGAGAGAATCCGTTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FRSQVCKHNFHRVANSQITSKMG*ERIRFL Trigger: CAGGAAACGGATTCTCTCCAAGCCCATCTTCGACGT...AATCTGTGAATTAGCCACTCTATGGAAATTATGTTTACAGACTTGGGATCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
||
| CDS-3UTR CAA 90 bp | CCCAAGTCTGTAAACATAATTTCCATAGAGTGGCTAATTCACAGATTAAACTGTCTCTTCATCCTCGTTTaGAAGACTCTGTCCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PKSVNIISIEWLIHRLNCLFILV*KTLSWL Trigger: CAGCCAGGACAGAGTCTTCAAAACGAGGATGAAGAG...ACAGTTTAATCTGTGAATTAGCCACTCTATGGAAATTATGTTTACAGACTTGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS-3UTR CAA 90 bp | TCAGATCCCAAGTCTGTAAACATAATTTCCATAGAGTGGCTAATTCACAGATTACAACGTAAGCAGAGATaGCAAAGCTGTCACCAAACC | + |
|
Preference number: 5 (lower is better) Translates to: SDPKSVNIISIEWLIHRLQRKQR*QSCHQT Trigger: GGTTTGGTGACAGCTTTGCAATCTCTGCTTACGTTG...TAATCTGTGAATTAGCCACTCTATGGAAATTATGTTTACAGACTTGGGATCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS CCA 72 bp | GAATCCGTTTCCTGCTGCAGTACCCCATCACGGAGCTaGCCACAGCGGGGTCCAGGGAGAAGCACAGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: ESVSCCSTPSRS*PQRGPGRSTGR Trigger: CCGCCCTGTGCTTCTCCCTGGACCCCGCTGTGGCCAGCTCCGTGATGGGGTACTGCAGCAGGAAACGGATTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS CCA 72 bp | TGTGAGGGGTCTCGCTCACACCGGAGGCAAAGAGCCTaGAAGGCACGGTTCTCCAGCACTCCTTCTGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CEGSRSHRRQRA*KARFSSTPSGS Trigger: GCTGCCAGAAGGAGTGCTGGAGAACCGTGCCTTCCAGGCTCTTTGCCTCCGGTGTGAGCGAGACCCCTCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS GCA 72 bp | CGTCGAAGATGGGCTTGGAGAGAATCCGTTTCCTGCTaGAGTACCCCATCACGGAGCTGGCCACAGCGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: RRRWAWRESVSC*STPSRSWPQRG Trigger: ACCCCGCTGTGGCCAGCTCCGTGATGGGGTACTGCAGCAGGAAACGGATTCTCTCCAAGCCCATCTTCGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS CCA 72 bp | TCCTGGCTGGTTCCATTCCTGCGCCTGGGAGGACCATaGCTCGCCCACGGGATGAAAGTCATTTCCCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SWLVPFLRLGGP*LAHGMKVISLF Trigger: GAAAAGGGAAATGACTTTCATCCCGTGGGCGAGCCATGGTCCTCCCAGGCGCAGGAATGGAACCAGCCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051784.10 ENSMUST00000223187.2 ENSMUST00000223319.2 |
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| CDS TCA 72 bp | TTGCAAAGCTGTCACCAAACCAGCATTGGTCAGGTGTaGGGGGTCTCGCTCACACCGGAGGCAAAGAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LQSCHQTSIGQV*GVSLTPEAKSL Trigger: CAGGCTCTTTGCCTCCGGTGTGAGCGAGACCCCTCACACCTGACCAATGCTGGTTTGGTGACAGCTTTGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS TCA 72 bp | ACGTACTTGCCCAGCTTTATAAGCAGTGGGAGTGCGTaGGTCTGGTCCAGGGCCACTAAGGCGGTGAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: TYLPSFISSGSA*VWSRATKAVRT Trigger: TGTCCTCACCGCCTTAGTGGCCCTGGACCAGACTCACGCACTCCCACTGCTTATAAAGCTGGGCAAGTACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS CAA 90 bp | ATGGCCAGACTTTCCCCAAGGACACAAAGATGGTGGACTTCGAGGTaGCCTCTTTGGAGACGACGTTGGCATTCTGCCACCAGGCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: MARLSPRTQRWWTSR*PLWRRRWHSATRLS Trigger: GCTGAGCCTGGTGGCAGAATGCCAACGTCGTCTCCAAAGAGGCAACCTCGAAGTCCACCATCTTTGTGTCCTTGGGGAAAGTCTGGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS CCA 72 bp | TGGTGGACTTCGAGGTTGCCTCTTTGGAGACGACGTTaGCATTCTGCCACCAGGCTCAGCATCAGGCTACTT | + |
|
Preference number: 6 (lower is better) Translates to: WWTSRLPLWRRR*HSATRLSIRLL Trigger: AAGTAGCCTGATGCTGAGCCTGGTGGCAGAATGCCAACGTCGTCTCCAAAGAGGCAACCTCGAAGTCCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS CCA 72 bp | AGGACACAAAGATGGTGGACTTCGAGGTTGCCTCTTTaGAGACGACGTTGGCATTCTGCCACCAGGCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RTQRWWTSRLPL*RRRWHSATRLS Trigger: GCTGAGCCTGGTGGCAGAATGCCAACGTCGTCTCCAAAGAGGCAACCTCGAAGTCCACCATCTTTGTGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS CAA 72 bp | ATGGTGGACTTCGAGGTTGCCTCTTTGGAGACGACGTaGGCATTCTGCCACCAGGCTCAGCATCAGGCTACT | + |
|
Preference number: 6 (lower is better) Translates to: MVDFEVASLETT*AFCHQAQHQAT Trigger: AGTAGCCTGATGCTGAGCCTGGTGGCAGAATGCCAACGTCGTCTCCAAAGAGGCAACCTCGAAGTCCACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS CAA 90 bp | ACTTTCCCCAAGGACACAAAGATGGTGGACTTCGAGGTTGCCTCTTaGGAGACGACGTTGGCATTCTGCCACCAGGCTCAGCATCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TFPKDTKMVDFEVAS*ETTLAFCHQAQHQA Trigger: AGCCTGATGCTGAGCCTGGTGGCAGAATGCCAACGTCGTCTCCAAAGAGGCAACCTCGAAGTCCACCATCTTTGTGTCCTTGGGGAAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS CAA 90 bp | TCCCACTGGCAAACAACGATCTCTGAGACTACGTCGAAGATGGGCTaGGAGAGAATCCGTTTCCTGCTGCAGTACCCCATCACGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SHWQTTISETTSKMG*ERIRFLLQYPITEL Trigger: CAGCTCCGTGATGGGGTACTGCAGCAGGAAACGGATTCTCTCCAAGCCCATCTTCGACGTAGTCTCAGAGATCGTTGTTTGCCAGTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS TCA 72 bp | GTTGTAGGGAGCAGAAGCACACACTCAGGCGATCTGTaGCTGCCTTTGGGGCATGACTGGCAGGGTGAATTT | + |
|
Preference number: 6 (lower is better) Translates to: VVGSRSTHSGDL*LPLGHDWQGEF Trigger: AAATTCACCCTGCCAGTCATGCCCCAAAGGCAGTCACAGATCGCCTGAGTGTGTGCTTCTGCTCCCTACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051784.10 ENSMUST00000222631.2 ENSMUST00000222660.2 ENSMUST00000223187.2 ENSMUST00000223319.2 |
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| CDS TCA 72 bp | CGGACAACCAGCTTCAGGGTCTCACAACTCGCACCTTaGAGCATGGCCAGACTTTCCCCAAGGACACAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RTTSFRVSQLAP*SMARLSPRTQR Trigger: TCTTTGTGTCCTTGGGGAAAGTCTGGCCATGCTTCAAGGTGCGAGTTGTGAGACCCTGAAGCTGGTTGTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS GCA 72 bp | TTCGAGGTTGCCTCTTTGGAGACGACGTTGGCATTCTaGCACCAGGCTCAGCATCAGGCTACTTTGAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: FEVASLETTLAF*HQAQHQATLRI Trigger: GATCCTCAAAGTAGCCTGATGCTGAGCCTGGTGGCAGAATGCCAACGTCGTCTCCAAAGAGGCAACCTCGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS CCA 72 bp | GCAGAAGCACACACTCAGGCGATCTGTGACTGCCTTTaGGGCATGACTGGCAGGGTGAATTTTCAGAGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: AEAHTQAICDCL*GMTGRVNFQSN Trigger: GTTGCTCTGAAAATTCACCCTGCCAGTCATGCCCCAAAGGCAGTCACAGATCGCCTGAGTGTGTGCTTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051784.10 ENSMUST00000222631.2 ENSMUST00000222660.2 ENSMUST00000223187.2 ENSMUST00000223319.2 |
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| CDS CCA 72 bp | AAGCATCTCTTCATCCTCGTTTTGAAGACTCTGTCCTaGCTGGTTCCATTCCTGCGCCTGGGAGGACCATGG | + |
|
Preference number: 6 (lower is better) Translates to: KHLFILVLKTLS*LVPFLRLGGPW Trigger: CCATGGTCCTCCCAGGCGCAGGAATGGAACCAGCCAGGACAGAGTCTTCAAAACGAGGATGAAGAGATGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051784.10 ENSMUST00000223187.2 ENSMUST00000223319.2 |
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| CDS CCA 72 bp | AGCATGGCCAGACTTTCCCCAAGGACACAAAGATGGTaGACTTCGAGGTTGCCTCTTTGGAGACGACGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SMARLSPRTQRW*TSRLPLWRRRW Trigger: CCAACGTCGTCTCCAAAGAGGCAACCTCGAAGTCCACCATCTTTGTGTCCTTGGGGAAAGTCTGGCCATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS CCA 72 bp | CCAGCTTCAGGGTCTCACAACTCGCACCTTGAAGCATaGCCAGACTTTCCCCAAGGACACAAAGATGGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PASGSHNSHLEA*PDFPQGHKDGG Trigger: TCCACCATCTTTGTGTCCTTGGGGAAAGTCTGGCCATGCTTCAAGGTGCGAGTTGTGAGACCCTGAAGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS CAA 72 bp | AAGGACACAAAGATGGTGGACTTCGAGGTTGCCTCTTaGGAGACGACGTTGGCATTCTGCCACCAGGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: KDTKMVDFEVAS*ETTLAFCHQAQ Trigger: CTGAGCCTGGTGGCAGAATGCCAACGTCGTCTCCAAAGAGGCAACCTCGAAGTCCACCATCTTTGTGTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS CAA 72 bp | CTTTCCCCAAGGACACAAAGATGGTGGACTTCGAGGTaGCCTCTTTGGAGACGACGTTGGCATTCTGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: LSPRTQRWWTSR*PLWRRRWHSAT Trigger: GGTGGCAGAATGCCAACGTCGTCTCCAAAGAGGCAACCTCGAAGTCCACCATCTTTGTGTCCTTGGGGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS CAA 72 bp | ACGGACAACCAGCTTCAGGGTCTCACAACTCGCACCTaGAAGCATGGCCAGACTTTCCCCAAGGACACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: TDNQLQGLTTRT*KHGQTFPKDTK Trigger: CTTTGTGTCCTTGGGGAAAGTCTGGCCATGCTTCAAGGTGCGAGTTGTGAGACCCTGAAGCTGGTTGTCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS CAA 90 bp | GACACAAAGATGGTGGACTTCGAGGTTGCCTCTTTGGAGACGACGTaGGCATTCTGCCACCAGGCTCAGCATCAGGCTACTTTGAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: DTKMVDFEVASLETT*AFCHQAQHQATLRI Trigger: GATCCTCAAAGTAGCCTGATGCTGAGCCTGGTGGCAGAATGCCAACGTCGTCTCCAAAGAGGCAACCTCGAAGTCCACCATCTTTGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS TCA 72 bp | TCCTGCGCCTGGGAGGACCATGGCTCGCCCACGGGATaGAAGTCATTTCCCTTTTCTGAGTGGAAGTTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SCAWEDHGSPTG*KSFPFSEWKFL Trigger: TAAAAACTTCCACTCAGAAAAGGGAAATGACTTTCATCCCGTGGGCGAGCCATGGTCCTCCCAGGCGCAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051784.10 ENSMUST00000223187.2 ENSMUST00000223319.2 |
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| CDS TCA 72 bp | TGGCATTCTGCCACCAGGCTCAGCATCAGGCTACTTTaGGGATCTGCAGGCAACAACGTAAGCAGAGATTGC | + |
|
Preference number: 6 (lower is better) Translates to: WHSATRLSIRLL*GSAGNNVSRDC Trigger: GCAATCTCTGCTTACGTTGTTGCCTGCAGATCCTCAAAGTAGCCTGATGCTGAGCCTGGTGGCAGAATGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS GCA 72 bp | TTTCCCCAAGGACACAAAGATGGTGGACTTCGAGGTTaGCTCTTTGGAGACGACGTTGGCATTCTGCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: FPQGHKDGGLRG*LFGDDVGILPP Trigger: TGGTGGCAGAATGCCAACGTCGTCTCCAAAGAGGCAACCTCGAAGTCCACCATCTTTGTGTCCTTGGGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS CAA 90 bp | GAGACGACGTTGGCATTCTGCCACCAGGCTCAGCATCAGGCTACTTaGAGGATCTGCAGGCAACAACGTAAGCAGAGATTGCAAAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ETTLAFCHQAQHQAT*RICRQQRKQRLQSC Trigger: ACAGCTTTGCAATCTCTGCTTACGTTGTTGCCTGCAGATCCTCAAAGTAGCCTGATGCTGAGCCTGGTGGCAGAATGCCAACGTCGTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS CAA 90 bp | TTGAAGTTGACGGACAACCAGCTTCAGGGTCTCACAACTCGCACCTaGAAGCATGGCCAGACTTTCCCCAAGGACACAAAGATGGTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LKLTDNQLQGLTTRT*KHGQTFPKDTKMVD Trigger: GTCCACCATCTTTGTGTCCTTGGGGAAAGTCTGGCCATGCTTCAAGGTGCGAGTTGTGAGACCCTGAAGCTGGTTGTCCGTCAACTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS GCA 72 bp | TGCCACCAGGCTCAGCATCAGGCTACTTTGAGGATCTaGAGGCAACAACGTAAGCAGAGATTGCAAAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CHQAQHQATLRI*RQQRKQRLQSC Trigger: ACAGCTTTGCAATCTCTGCTTACGTTGTTGCCTGCAGATCCTCAAAGTAGCCTGATGCTGAGCCTGGTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS CCA 72 bp | ACTGGCAAACAACGATCTCTGAGACTACGTCGAAGATaGGCTTGGAGAGAATCCGTTTCCTGCTGCAGTACC | + |
|
Preference number: 6 (lower is better) Translates to: TGKQRSLRLRRR*AWRESVSCCST Trigger: GGTACTGCAGCAGGAAACGGATTCTCTCCAAGCCCATCTTCGACGTAGTCTCAGAGATCGTTGTTTGCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS TCA 72 bp | CTTAGTCTCCTGAAAAGCATCTCTTCATCCTCGTTTTaGAGACTCTGTCCTGGCTGGTTCCATTCCTGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: LSLLKSISSSSF*RLCPGWFHSCA Trigger: GGCGCAGGAATGGAACCAGCCAGGACAGAGTCTTCAAAACGAGGATGAAGAGATGCTTTTCAGGAGACTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051784.10 ENSMUST00000223187.2 ENSMUST00000223319.2 |
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| CDS CCA 72 bp | AAACAACGATCTCTGAGACTACGTCGAAGATGGGCTTaGAGAGAATCCGTTTCCTGCTGCAGTACCCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: KQRSLRLRRRWA*RESVSCCSTPS Trigger: TGATGGGGTACTGCAGCAGGAAACGGATTCTCTCCAAGCCCATCTTCGACGTAGTCTCAGAGATCGTTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS CAA 72 bp | TCAGCGCACATGAATGAAGGAGCCTCAGTAGCATCTTaGGTGGGAAGTGATGTAAACGGGCACAGAGCACAT | + |
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Preference number: 6 (lower is better) Translates to: SAHMNEGASVAS*VGSDVNGHRAH Trigger: ATGTGCTCTGTGCCCGTTTACATCACTTCCCACCAAAGATGCTACTGAGGCTCCTTCATTCATGTGCGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051784.10 ENSMUST00000222685.2 ENSMUST00000223319.2 |
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| CDS CCA 72 bp | AGATCAATCAGTCCAATCACCACAGACTTATACAGATaGAGATCCAGGGGCGTCTCTAAGGAGCAGCATGGA | + |
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Preference number: 6 (lower is better) Translates to: RSISPITTDLYR*RSRGVSKEQHG Trigger: TCCATGCTGCTCCTTAGAGACGCCCCTGGATCTCCATCTGTATAAGTCTGTGGTGATTGGACTGATTGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS CAA 90 bp | CGTGATCTCCTCTGGAGCAAATGTTTCCACACTTTTACTTTGAAGTaGACGGACAACCAGCTTCAGGGTCTCACAACTCGCACCTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: RDLLWSKCFHTFTLK*TDNQLQGLTTRTLK Trigger: CTTCAAGGTGCGAGTTGTGAGACCCTGAAGCTGGTTGTCCGTCAACTTCAAAGTAAAAGTGTGGAAACATTTGCTCCAGAGGAGATCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS TCA 72 bp | TGGCTCGCCCACGGGATGAAAGTCATTTCCCTTTTCTaGGTGGAAGTTTTTACAGTATGCGTGATGGAATCT | + |
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Preference number: 6 (lower is better) Translates to: WLAHGMKVISLF*VEVFTVCVMES Trigger: AGATTCCATCACGCATACTGTAAAAACTTCCACTCAGAAAAGGGAAATGACTTTCATCCCGTGGGCGAGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000051784.10 ENSMUST00000222660.2 ENSMUST00000223187.2 ENSMUST00000223319.2 |
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| CDS TCA 72 bp | CTTCAGGACACACCTGCAGAATCCTATAAACGGACGTaGTCTCCTCTGGAGCAAATGTTTCCACACTTTTAC | + |
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Preference number: 6 (lower is better) Translates to: LQDTPAESYKRT*SPLEQMFPHFY Trigger: GTAAAAGTGTGGAAACATTTGCTCCAGAGGAGATCACGTCCGTTTATAGGATTCTGCAGGTGTGTCCTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS CCA 72 bp | CACCTGCAGAATCCTATAAACGGACGTGATCTCCTCTaGAGCAAATGTTTCCACACTTTTACTTTGAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: HLQNPINGRDLL*SKCFHTFTLKL Trigger: CAACTTCAAAGTAAAAGTGTGGAAACATTTGCTCCAGAGGAGATCACGTCCGTTTATAGGATTCTGCAGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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| CDS CAA 72 bp | AATAGGGCGTCAACACCTTTGAAGCAAAATACAGTCTaGATCCTAAAAGATCAATCAGTCCAATCACCACAG | + |
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Preference number: 6 (lower is better) Translates to: NRASTPLKQNTV*ILKDQSVQSPQ Trigger: CTGTGGTGATTGGACTGATTGATCTTTTAGGATCAAGACTGTATTTTGCTTCAAAGGTGTTGACGCCCTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051784.10 ENSMUST00000223319.2 |
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