Pregenerated sensors for FASTKD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025962Ensembl transcript IDs: ENSMUST00000027103.7
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAGGTGTGTGCATGTGGAAGCCAGAGGTTACGGTCAGCAGGTCTTaGCCAATATATCTGGCCAGTGGGCTCCTAGGGTCTGCCAAGATT | + |
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Preference number: 1 (lower is better) Translates to: RGVCMWKPEVTVSRS*PIYLASGLLGSAKI Trigger: AATCTTGGCAGACCCTAGGAGCCCACTGGCCAGATATATTGGCCAAGACCTGCTGACCGTAACCTCTGGCTTCCACATGCACACACCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR GCA 90 bp | GCTTCTCCTTTTACCTCCTGTTGCAGCCCAGGACACACCTCCACTTaGAGTGCTTGCTACATATGTGCACGGCATCCTCATCTGCTGTGT | + |
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Preference number: 1 (lower is better) Translates to: ASPFTSCCSPGHTST*SACYICARHPHLLC Trigger: ACACAGCAGATGAGGATGCCGTGCACATATGTAGCAAGCACTGCAAGTGGAGGTGTGTCCTGGGCTGCAACAGGAGGTAAAAGGAGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR CCA 90 bp | ACAAAGCCAGAAAGTGTCCAATATGGAACCAGAGGCCAGACCTCCTaGGACACCAACTGCAGAGCATCAGAGGATGAGAGGGTGTGGAGA | + |
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Preference number: 1 (lower is better) Translates to: TKPESVQYGTRGQTS*DTNCRASEDERVWR Trigger: TCTCCACACCCTCTCATCCTCTGATGCTCTGCAGTTGGTGTCCCAGGAGGTCTGGCCTCTGGTTCCATATTGGACACTTTCTGGCTTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR TCA 90 bp | CCAGCCCTGACCTTTCTACATGCATCTGGACACACTGATAAAATCTaGCAGCTGTTGTCATGCCACTGTGGTTTGTTAATTGGCCAGCTA | + |
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Preference number: 1 (lower is better) Translates to: PALTFLHASGHTDKI*QLLSCHCGLLIGQL Trigger: TAGCTGGCCAATTAACAAACCACAGTGGCATGACAACAGCTGTCAGATTTTATCAGTGTGTCCAGATGCATGTAGAAAGGTCAGGGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR GCA 90 bp | ATTTTAACAAACACGGATGACTTCGCTTCTCCTTTTACCTCCTGTTaGAGCCCAGGACACACCTCCACTTGCAGTGCTTGCTACATATGT | + |
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Preference number: 1 (lower is better) Translates to: ILTNTDDFASPFTSC*SPGHTSTCSACYIC Trigger: ACATATGTAGCAAGCACTGCAAGTGGAGGTGTGTCCTGGGCTGCAACAGGAGGTAAAAGGAGAAGCGAAGTCATCCGTGTTTGTTAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR GCA 90 bp | GAGCTGACCATGAGGAACACTAGTGAAAGAGGAATGTCCTGCACATaGACCTCAGTCAGCCAAACAAATAAAATGACGACTCCATGCAGT | + |
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Preference number: 1 (lower is better) Translates to: ELTMRNTSERGMSCT*TSVSQTNKMTTPCS Trigger: ACTGCATGGAGTCGTCATTTTATTTGTTTGGCTGACTGAGGTGCATGTGCAGGACATTCCTCTTTCACTAGTGTTCCTCATGGTCAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR GCA 90 bp | ACAGCTCTTGGACATATTAAGCATCTGCACAGTCAGAGGAGCAGATaGTGTTGGAAAAATGGCTCTTCTGAAGTGTTTCCAGTGTGTTCC | + |
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Preference number: 1 (lower is better) Translates to: TALGHIKHLHSQRSR*CWKNGSSEVFPVCS Trigger: GGAACACACTGGAAACACTTCAGAAGAGCCATTTTTCCAACAGCATCTGCTCCTCTGACTGTGCAGATGCTTAATATGTCCAAGAGCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR CCA 90 bp | CTTCCAAGGTTATTGGTGGATAACCATCCACATCTGGCTTTAACATaGGTAATATCTGCACACCAGACACCATCATCACTGAACCATCCC | + |
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Preference number: 1 (lower is better) Translates to: LPRLLVDNHPHLALT*VISAHQTPSSLNHP Trigger: GGGATGGTTCAGTGATGATGGTGTCTGGTGTGCAGATATTACCCATGTTAAAGCCAGATGTGGATGGTTATCCACCAATAACCTTGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR CCA 90 bp | CTTGGACATATTAAGCATCTGCACAGTCAGAGGAGCAGATGCTGTTaGAAAAATGGCTCTTCTGAAGTGTTTCCAGTGTGTTCCAAAATA | + |
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Preference number: 1 (lower is better) Translates to: LGHIKHLHSQRSRCC*KNGSSEVFPVCSKI Trigger: TATTTTGGAACACACTGGAAACACTTCAGAAGAGCCATTTTTCCAACAGCATCTGCTCCTCTGACTGTGCAGATGCTTAATATGTCCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR CCA 90 bp | TGCACATGTTGGGTGCTTAGGGATAGACTAATACTTCTTTGTGCATaGATGACTATACACATTCACCAGTGTATCCCATGGTTAGTGAAT | + |
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Preference number: 1 (lower is better) Translates to: CTCWVLRDRLILLCA*MTIHIHQCIPWLVN Trigger: ATTCACTAACCATGGGATACACTGGTGAATGTGTATAGTCATCCATGCACAAAGAAGTATTAGTCTATCCCTAAGCACCCAACATGTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR GCA 90 bp | AACAATCCTTATAAGTGTTTGTCAGCTCACATTCAAACCCTAGCCTaGCTTGCTGTCTGTAGAGATGACAAAACATTTCTCCACATACTA | + |
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Preference number: 1 (lower is better) Translates to: NNPYKCLSAHIQTLA*LAVCRDDKTFLHIL Trigger: TAGTATGTGGAGAAATGTTTTGTCATCTCTACAGACAGCAAGGCAGGCTAGGGTTTGAATGTGAGCTGACAAACACTTATAAGGATTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR TCA 90 bp | AATGACAACACATCTTCCATTCTTAAAGTCATCTTTAACCCAACCTaGAAATACCATTGTTGCAGTGATCAGCCAGCTGATCCACGAATA | + |
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Preference number: 1 (lower is better) Translates to: NDNTSSILKVIFNPT*KYHCCSDQPADPRI Trigger: TATTCGTGGATCAGCTGGCTGATCACTGCAACAATGGTATTTTCAGGTTGGGTTAAAGATGACTTTAAGAATGGAAGATGTGTTGTCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR CAA 90 bp | GAGAGGTGTGTGCATGTGGAAGCCAGAGGTTACGGTCAGCAGGTCTaGGCCAATATATCTGGCCAGTGGGCTCCTAGGGTCTGCCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: ERCVHVEARGYGQQV*ANISGQWAPRVCQD Trigger: ATCTTGGCAGACCCTAGGAGCCCACTGGCCAGATATATTGGCCAAGACCTGCTGACCGTAACCTCTGGCTTCCACATGCACACACCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR-3UTR TCA 90 bp | ACTGAGCTGACCATGAGGAACACTAGTGAAAGAGGAATGTCCTGCACATGCACCCAGAGCATCAGAGGATaGGAGGGTGTGGAGAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: TELTMRNTSERGMSCTCTQSIRG*EGVESN Trigger: GTTGCTCTCCACACCCTCTCATCCTCTGATGCTCTG...GGTGCATGTGCAGGACATTCCTCTTTCACTAGTGTTCCTCATGGTCAGCTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR-3UTR GCA 90 bp | ACTAATCTTTTCTACAGTCCAGCTGTTATCCCCCTCCTGGTCTGCCCTCTGACTTACCTCACCAACTCTTaGATGACCTACGGCTTGAGA | + |
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Preference number: 2 (lower is better) Translates to: TNLFYSPAVIPLLVCPLTYLTNS*MTYGLR Trigger: TCTCAAGCCGTAGGTCATGCAAGAGTTGGTGAGGTA...AGTCAGAGGGCAGACCAGGAGGGGGATAACAGCTGGACTGTAGAAAAGATTAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR-3UTR CCA 90 bp | ACAAATACTGGGCAAACAGGAAGACACTCCAACAACTGCACATGTTGGGTGCTTAGAGGTGTGTGCATGTaGAAGCCAGAGGTTACGGTC | + |
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Preference number: 2 (lower is better) Translates to: TNTGQTGRHSNNCTCWVLRGVCM*KPEVTV Trigger: GACCGTAACCTCTGGCTTCCACATGCACACACCTCT...AAGCACCCAACATGTGCAGTTGTTGGAGTGTCTTCCTGTTTGCCCAGTATTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR-3UTR GCA 90 bp | ATTCAAACCCTAGCCTGCCTTGCTGTCTGTAGAGATGACAAAACATTTCTCCACCACGGCATCCTCATCTaGTGTGTGCATGTGTGGATG | + |
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Preference number: 2 (lower is better) Translates to: IQTLACLAVCRDDKTFLHHGILI*CVHVWM Trigger: CATCCACACATGCACACAGCAGATGAGGATGCCGTG...GTGGAGAAATGTTTTGTCATCTCTACAGACAGCAAGGCAGGCTAGGGTTTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR-3UTR CCA 90 bp | ACTGAGCTGACCATGAGGAACACTAGTGAAAGAGGAATGTCCTGCACATGCACCGTTGTCATGCCACTGTaGTTTGTTAATTGGCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: TELTMRNTSERGMSCTCTVVMPL*FVNWPA Trigger: AGCTGGCCAATTAACAAACCACAGTGGCATGACAAC...GGTGCATGTGCAGGACATTCCTCTTTCACTAGTGTTCCTCATGGTCAGCTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR-3UTR CCA 90 bp | ACTGAGCTGACCATGAGGAACACTAGTGAAAGAGGAATGTCCTGCACATGCACCAGGAGCAGATGCTGTTaGAAAAATGGCTCTTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: TELTMRNTSERGMSCTCTRSRCC*KNGSSE Trigger: TTCAGAAGAGCCATTTTTCCAACAGCATCTGCTCCT...GGTGCATGTGCAGGACATTCCTCTTTCACTAGTGTTCCTCATGGTCAGCTCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR-3UTR CCA 90 bp | AAAGAACGAACCTTGGTTTCCTTAGTAACAGTATTTCCATCACACTCTGAACCTAGAGGCCAGACCTCCTaGGACACCAACTGCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: KERTLVSLVTVFPSHSEPRGQTS*DTNCRA Trigger: TGCTCTGCAGTTGGTGTCCCAGGAGGTCTGGCCTCT...AGGTTCAGAGTGTGATGGAAATACTGTTACTAAGGAAACCAAGGTTCGTTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR-3UTR GCA 90 bp | ACAAATACTGGGCAAACAGGAAGACACTCCAACAACTGCACATGTTGGGTGCTTATTTTGGAAGTCTCATaGAATGGTGGGAGAGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: TNTGQTGRHSNNCTCWVLILEVS*NGGRGK Trigger: CTTGCCTCTCCCACCATTGCATGAGACTTCCAAAAT...AAGCACCCAACATGTGCAGTTGTTGGAGTGTCTTCCTGTTTGCCCAGTATTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR-3UTR TCA 90 bp | ACTAATCTTTTCTACAGTCCAGCTGTTATCCCCCTCCTGGTCTGCCCTCTGACTGTTCCAAAATACCAATaGCAACACATCTTCCATTCT | + |
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Preference number: 2 (lower is better) Translates to: TNLFYSPAVIPLLVCPLTVPKYQ*QHIFHS Trigger: AGAATGGAAGATGTGTTGTCATTGGTATTTTGGAAC...AGTCAGAGGGCAGACCAGGAGGGGGATAACAGCTGGACTGTAGAAAAGATTAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR-3UTR TCA 90 bp | TACAAATACTGGGCAAACAGGAAGACACTCCAACAACTGCACATGTTGGGTGCTGAAAAATGGCTCTTCTaGAGTGTTTCCAGTGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: YKYWANRKTLQQLHMLGAEKWLF*SVSSVF Trigger: GAACACACTGGAAACACTTCAGAAGAGCCATTTTTC...AGCACCCAACATGTGCAGTTGTTGGAGTGTCTTCCTGTTTGCCCAGTATTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR-3UTR GCA 90 bp | TACAAATACTGGGCAAACAGGAAGACACTCCAACAACTGCACATGTTGGGTGCTAACATGGGTAATATCTaGACACCAGACACCATCATC | + |
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Preference number: 2 (lower is better) Translates to: YKYWANRKTLQQLHMLGANMGNI*TPDTII Trigger: GATGATGGTGTCTGGTGTGCAGATATTACCCATGTT...AGCACCCAACATGTGCAGTTGTTGGAGTGTCTTCCTGTTTGCCCAGTATTTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR-3UTR CCA 90 bp | ACAAATACTGGGCAAACAGGAAGACACTCCAACAACTGCACATGTTGGGTGCTTCATCTGGCTTTAACATaGGTAATATCTGCACACCAG | + |
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Preference number: 2 (lower is better) Translates to: TNTGQTGRHSNNCTCWVLHLALT*VISAHQ Trigger: CTGGTGTGCAGATATTACCCATGTTAAAGCCAGATG...AAGCACCCAACATGTGCAGTTGTTGGAGTGTCTTCCTGTTTGCCCAGTATTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR-3UTR TCA 90 bp | AAAGAACGAACCTTGGTTTCCTTAGTAACAGTATTTCCATCACACTCTGAACCTACTTCCTTCCAGCCCTaGCCTTTCTACATGCATCTG | + |
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Preference number: 2 (lower is better) Translates to: KERTLVSLVTVFPSHSEPTSFQP*PFYMHL Trigger: CAGATGCATGTAGAAAGGTCAGGGCTGGAAGGAAGT...AGGTTCAGAGTGTGATGGAAATACTGTTACTAAGGAAACCAAGGTTCGTTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR-3UTR CCA 90 bp | ACAAATACTGGGCAAACAGGAAGACACTCCAACAACTGCACATGTTGGGTGCTTTTCCAAGGATACTGGTaGATAACCATTCACATCTTC | + |
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Preference number: 2 (lower is better) Translates to: TNTGQTGRHSNNCTCWVLFQGYW*ITIHIF Trigger: GAAGATGTGAATGGTTATCCACCAGTATCCTTGGAA...AAGCACCCAACATGTGCAGTTGTTGGAGTGTCTTCCTGTTTGCCCAGTATTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR-3UTR TCA 90 bp | AAAGAACGAACCTTGGTTTCCTTAGTAACAGTATTTCCATCACACTCTGAACCTCACACTGATAAAATCTaGCAGCTGTTGTCATGCCAC | + |
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Preference number: 2 (lower is better) Translates to: KERTLVSLVTVFPSHSEPHTDKI*QLLSCH Trigger: GTGGCATGACAACAGCTGTCAGATTTTATCAGTGTG...AGGTTCAGAGTGTGATGGAAATACTGTTACTAAGGAAACCAAGGTTCGTTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR-3UTR CCA 90 bp | TACAAATACTGGGCAAACAGGAAGACACTCCAACAACTGCACATGTTGGGTGCTATACTTCTTTGTGCATaGATGACTATACACATTCAC | + |
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Preference number: 2 (lower is better) Translates to: YKYWANRKTLQQLHMLGAILLCA*MTIHIH Trigger: GTGAATGTGTATAGTCATCCATGCACAAAGAAGTAT...AGCACCCAACATGTGCAGTTGTTGGAGTGTCTTCCTGTTTGCCCAGTATTTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR GCA 72 bp | TATGGAACCAGAGGCCAGACCTCCTGGGACACCAACTaGAGAGCATCAGAGGATGAGAGGGTGTGGAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: YGTRGQTSWDTN*RASEDERVWRA Trigger: TGCTCTCCACACCCTCTCATCCTCTGATGCTCTGCAGTTGGTGTCCCAGGAGGTCTGGCCTCTGGTTCCATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR GCA 72 bp | CTTTTCTACAGTCCAGCTGTTATCCCCCTCCTGGTCTaGCCTCTGACTGTTCCTCATCCCGTAGCTCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: LFYSPAVIPLLV*PLTVPHPVAPP Trigger: GGGAGGAGCTACGGGATGAGGAACAGTCAGAGGGCAGACCAGGAGGGGGATAACAGCTGGACTGTAGAAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR-3UTR CAA 90 bp | CAGCCCAGGACACACCTCCACTTGCAGTGCTTGCTACATATGTGCACGGCATCCCTACCTCACCAACTCTaGCATGACCTACGGCTTGAG | + |
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Preference number: 3 (lower is better) Translates to: QPRTHLHLQCLLHMCTASLPHQL*HDLRLE Trigger: CTCAAGCCGTAGGTCATGCAAGAGTTGGTGAGGTAG...GGATGCCGTGCACATATGTAGCAAGCACTGCAAGTGGAGGTGTGTCCTGGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR GCA 72 bp | CTGAACCATCCCCAGGCCCCGCACTCACATTTCACATaGTACCTCACCAACTCTTGCATGACCTACGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: LNHPQAPHSHFT*YLTNSCMTYGL Trigger: CAAGCCGTAGGTCATGCAAGAGTTGGTGAGGTAGCATGTGAAATGTGAGTGCGGGGCCTGGGGATGGTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR GCA 72 bp | CTCCTGTTGCAGCCCAGGACACACCTCCACTTGCAGTaGTTGCTACATATGTGCACGGCATCCTCATCTGCT | + |
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Preference number: 3 (lower is better) Translates to: LLLQPRTHLHLQ*LLHMCTASSSA Trigger: AGCAGATGAGGATGCCGTGCACATATGTAGCAAGCACTGCAAGTGGAGGTGTGTCCTGGGCTGCAACAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR CCA 72 bp | TGCATGTGGAAGCCAGAGGTTACGGTCAGCAGGTCTTaGCCAATATATCTGGCCAGTGGGCTCCTAGGGTCT | + |
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Preference number: 3 (lower is better) Translates to: CMWKPEVTVSRS*PIYLASGLLGS Trigger: AGACCCTAGGAGCCCACTGGCCAGATATATTGGCCAAGACCTGCTGACCGTAACCTCTGGCTTCCACATGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR CCA 72 bp | GAAAGTGTCCAATATGGAACCAGAGGCCAGACCTCCTaGGACACCAACTGCAGAGCATCAGAGGATGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: ESVQYGTRGQTS*DTNCRASEDER Trigger: CCTCTCATCCTCTGATGCTCTGCAGTTGGTGTCCCAGGAGGTCTGGCCTCTGGTTCCATATTGGACACTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR CCA 72 bp | GGGCTAAGCACACACAAAGCCAGAAAGTGTCCAATATaGAACCAGAGGCCAGACCTCCTGGGACACCAACTG | + |
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Preference number: 3 (lower is better) Translates to: GLSTHKARKCPI*NQRPDLLGHQL Trigger: CAGTTGGTGTCCCAGGAGGTCTGGCCTCTGGTTCCATATTGGACACTTTCTGGCTTTGTGTGTGCTTAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR-3UTR CAA 90 bp | ACTAATCTTTTCTACAGTCCAGCTGTTATCCCCCTCCTGGTCTGCCCTCTGACTCTCCACTTGCAGTGCTaGCTACATATGTGCACGGCA | + |
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Preference number: 3 (lower is better) Translates to: TNLFYSPAVIPLLVCPLTLHLQC*LHMCTA Trigger: TGCCGTGCACATATGTAGCAAGCACTGCAAGTGGAG...AGTCAGAGGGCAGACCAGGAGGGGGATAACAGCTGGACTGTAGAAAAGATTAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR GCA 72 bp | CCGCACTCACATTTCACATGCTACCTCACCAACTCTTaGATGACCTACGGCTTGAGAACTTGGTCGAAATGC | + |
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Preference number: 3 (lower is better) Translates to: PHSHFTCYLTNS*MTYGLRTWSKC Trigger: GCATTTCGACCAAGTTCTCAAGCCGTAGGTCATGCAAGAGTTGGTGAGGTAGCATGTGAAATGTGAGTGCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR-3UTR CAA 90 bp | ACAAATACTGGGCAAACAGGAAGACACTCCAACAACTGCACATGTTGGGTGCTTAGGACACACCTCCACTaGCAGTGCTTGCTACATATG | + |
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Preference number: 3 (lower is better) Translates to: TNTGQTGRHSNNCTCWVLRTHLH*QCLLHM Trigger: CATATGTAGCAAGCACTGCAAGTGGAGGTGTGTCCT...AAGCACCCAACATGTGCAGTTGTTGGAGTGTCTTCCTGTTTGCCCAGTATTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR-3UTR CAA 90 bp | AACAATCCTTATAAGTGTTTGTCAGCTCACATTCAAACCCTAGCCTGCCTTGCTTCCTTTTACCTCCTGTaGCAGCCCAGGACACACCTC | + |
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Preference number: 3 (lower is better) Translates to: NNPYKCLSAHIQTLACLASFYLL*QPRTHL Trigger: GAGGTGTGTCCTGGGCTGCAACAGGAGGTAAAAGGA...AGCAAGGCAGGCTAGGGTTTGAATGTGAGCTGACAAACACTTATAAGGATTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR TCA 72 bp | GTCAATGGACAGCCTATCCATTTTAACAAACACGGATaGCTTCGCTTCTCCTTTTACCTCCTGTTGCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: VNGQPIHFNKHG*LRFSFYLLLQP Trigger: GGGCTGCAACAGGAGGTAAAAGGAGAAGCGAAGTCATCCGTGTTTGTTAAAATGGATAGGCTGTCCATTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR CCA 72 bp | GGGCAAACAGGAAGACACTCCAACAACTGCACATGTTaGGTGCTTAGGGATAGACTAATACTTCTTTGTGCA | + |
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Preference number: 3 (lower is better) Translates to: GQTGRHSNNCTC*VLRDRLILLCA Trigger: TGCACAAAGAAGTATTAGTCTATCCCTAAGCACCCAACATGTGCAGTTGTTGGAGTGTCTTCCTGTTTGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR CCA 72 bp | CTGACAGCTGTTGTCATGCCACTGTGGTTTGTTAATTaGCCAGCTAGGGGAATCCTCAACAATCCTTATAAG | + |
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Preference number: 3 (lower is better) Translates to: LTAVVMPLWFVN*PARGILNNPYK Trigger: CTTATAAGGATTGTTGAGGATTCCCCTAGCTGGCCAATTAACAAACCACAGTGGCATGACAACAGCTGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR CCA 72 bp | ATTAAGCATCTGCACAGTCAGAGGAGCAGATGCTGTTaGAAAAATGGCTCTTCTGAAGTGTTTCCAGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: IKHLHSQRSRCC*KNGSSEVFPVC Trigger: ACACACTGGAAACACTTCAGAAGAGCCATTTTTCCAACAGCATCTGCTCCTCTGACTGTGCAGATGCTTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR GCA 72 bp | ATGAGGAACACTAGTGAAAGAGGAATGTCCTGCACATaGACCTCAGTCAGCCAAACAAATAAAATGACGACT | + |
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Preference number: 3 (lower is better) Translates to: MRNTSERGMSCT*TSVSQTNKMTT Trigger: AGTCGTCATTTTATTTGTTTGGCTGACTGAGGTGCATGTGCAGGACATTCCTCTTTCACTAGTGTTCCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR CCA 72 bp | TTATTGGTGGATAACCATCCACATCTGGCTTTAACATaGGTAATATCTGCACACCAGACACCATCATCACTG | + |
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Preference number: 3 (lower is better) Translates to: LLVDNHPHLALT*VISAHQTPSSL Trigger: CAGTGATGATGGTGTCTGGTGTGCAGATATTACCCATGTTAAAGCCAGATGTGGATGGTTATCCACCAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR CCA 72 bp | TGGGTGCTTAGGGATAGACTAATACTTCTTTGTGCATaGATGACTATACACATTCACCAGTGTATCCCATGG | + |
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Preference number: 3 (lower is better) Translates to: WVLRDRLILLCA*MTIHIHQCIPW Trigger: CCATGGGATACACTGGTGAATGTGTATAGTCATCCATGCACAAAGAAGTATTAGTCTATCCCTAAGCACCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| 3UTR GCA 72 bp | TATAAGTGTTTGTCAGCTCACATTCAAACCCTAGCCTaGCTTGCTGTCTGTAGAGATGACAAAACATTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: YKCLSAHIQTLA*LAVCRDDKTFL Trigger: GAGAAATGTTTTGTCATCTCTACAGACAGCAAGGCAGGCTAGGGTTTGAATGTGAGCTGACAAACACTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| 3UTR CCA 72 bp | TACTGGTGGATAACCATCCATATCTTCCAAGGATACTaGTGGATAACCATTCACATCTTCCAAGGTTATTGG | + |
|
Preference number: 3 (lower is better) Translates to: YWWITIHIFQGY*WITIHIFQGYW Trigger: CCAATAACCTTGGAAGATGTGAATGGTTATCCACCAGTATCCTTGGAAGATATGGATGGTTATCCACCAGTA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| 3UTR TCA 72 bp | ACATCTTCCATTCTTAAAGTCATCTTTAACCCAACCTaGAAATACCATTGTTGCAGTGATCAGCCAGCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: TSSILKVIFNPT*KYHCCSDQPAD Trigger: ATCAGCTGGCTGATCACTGCAACAATGGTATTTTCAGGTTGGGTTAAAGATGACTTTAAGAATGGAAGATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| 3UTR TCA 72 bp | TATTCAGACTTCAAACTCCCAACACAAACTTACATGTaGCCTATCATAACACAACTAAGAAAGCAGCTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: YSDFKLPTQTYM*PIITQLRKQLL Trigger: TAAAAGCTGCTTTCTTAGTTGTGTTATGATAGGTCACATGTAAGTTTGTGTTGGGAGTTTGAAGTCTGAATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR TCA 90 bp | CTGTTGCAGCCCAGGACACACCTCCACTTGCAGTGCTTGCTACATATGTGCACGTGGTTAAAGGCAGGGTaGCTGAACATCAGCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLQPRTHLHLQCLLHMCTWLKAG*LNISCL Trigger: GAGACAGCTGATGTTCAGTCACCCTGCCTTTAACCA...CGTGCACATATGTAGCAAGCACTGCAAGTGGAGGTGTGTCCTGGGCTGCAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| 3UTR CAA 72 bp | TTTTACCTCCTGTTGCAGCCCAGGACACACCTCCACTaGCAGTGCTTGCTACATATGTGCACGGCATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FYLLLQPRTHLH*QCLLHMCTASS Trigger: TGAGGATGCCGTGCACATATGTAGCAAGCACTGCAAGTGGAGGTGTGTCCTGGGCTGCAACAGGAGGTAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR TCA 90 bp | CAGCCCAGGACACACCTCCACTTGCAGTGCTTGCTACATATGTGCACGGCATCCTCTTCCTCACAAATGTaGCCGCATCCTCCATCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: QPRTHLHLQCLLHMCTASSSSQM*PHPPSL Trigger: TAAAGATGGAGGATGCGGTCACATTTGTGAGGAAGA...GGATGCCGTGCACATATGTAGCAAGCACTGCAAGTGGAGGTGTGTCCTGGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR TCA 90 bp | CAGCCCAGGACACACCTCCACTTGCAGTGCTTGCTACATATGTGCACGGCATCCGGGTTCCATTTTGAATaGATAACCTCTGGTCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QPRTHLHLQCLLHMCTASGFHFE*ITSGLQ Trigger: TTGCAGACCAGAGGTTATTCATTCAAAATGGAACCC...GGATGCCGTGCACATATGTAGCAAGCACTGCAAGTGGAGGTGTGTCCTGGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR CCA 90 bp | CAGCCCAGGACACACCTCCACTTGCAGTGCTTGCTACATATGTGCACGGCATCCTTCAGCTCCCAGTTATaGATCAAGATCACATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QPRTHLHLQCLLHMCTASFSSQL*IKITWK Trigger: CTTCCATGTGATCTTGATCCATAACTGGGAGCTGAA...GGATGCCGTGCACATATGTAGCAAGCACTGCAAGTGGAGGTGTGTCCTGGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR TCA 90 bp | CTGTTGCAGCCCAGGACACACCTCCACTTGCAGTGCTTGCTACATATGTGCACGAAATGTAGGTGCTTTTaGAAATGTGTCCAGCACATC | + |
|
Preference number: 4 (lower is better) Translates to: LLQPRTHLHLQCLLHMCTKCRCF*KCVQHI Trigger: GATGTGCTGGACACATTTTCAAAAGCACCTACATTT...CGTGCACATATGTAGCAAGCACTGCAAGTGGAGGTGTGTCCTGGGCTGCAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR CCA 90 bp | CTGTTGCAGCCCAGGACACACCTCCACTTGCAGTGCTTGCTACATATGTGCACGATAATTCACAGGGGTTaGTCTTACTTTCTTGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLQPRTHLHLQCLLHMCTIIHRG*SYFLGE Trigger: TTCACCAAGAAAGTAAGACCAACCCCTGTGAATTAT...CGTGCACATATGTAGCAAGCACTGCAAGTGGAGGTGTGTCCTGGGCTGCAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR CCA 90 bp | CAGCCCAGGACACACCTCCACTTGCAGTGCTTGCTACATATGTGCACGGCATCCAATGTGATAATTATGTaGCAATGGCACATTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: QPRTHLHLQCLLHMCTASNVIIM*QWHISR Trigger: TCGAGAAATGTGCCATTGCCACATAATTATCACATT...GGATGCCGTGCACATATGTAGCAAGCACTGCAAGTGGAGGTGTGTCCTGGGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR CCA 90 bp | CTGTTGCAGCCCAGGACACACCTCCACTTGCAGTGCTTGCTACATATGTGCACGTGGATCAAGATCACATaGAAGCCCATTACATTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLQPRTHLHLQCLLHMCTWIKIT*KPITFK Trigger: TTTGAATGTAATGGGCTTCCATGTGATCTTGATCCA...CGTGCACATATGTAGCAAGCACTGCAAGTGGAGGTGTGTCCTGGGCTGCAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR GCA 90 bp | ACTAATCTTTTCTACAGTCCAGCTGTTATCCCCCTCCTGGTCTGCCCTCTGACTCTATCCTCAAAGCTCTaGTTCTTGGAAGTAACGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TNLFYSPAVIPLLVCPLTLSSKL*FLEVTY Trigger: GTACGTTACTTCCAAGAAGCAGAGCTTTGAGGATAG...AGTCAGAGGGCAGACCAGGAGGGGGATAACAGCTGGACTGTAGAAAAGATTAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| 3UTR CAA 72 bp | CCAGCTAGGGGAATCCTCAACAATCCTTATAAGTGTTaGTCAGCTCACATTCAAACCCTAGCCTGCCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PARGILNNPYKC*SAHIQTLACLA Trigger: AGCAAGGCAGGCTAGGGTTTGAATGTGAGCTGACAAACACTTATAAGGATTGTTGAGGATTCCCCTAGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR TCA 90 bp | ACTGAGCTGACCATGAGGAACACTAGTGAAAGAGGAATGTCCTGCACATGCACCAGGTTTAAAAACGGCTaGATGGCTTATGCCTTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: TELTMRNTSERGMSCTCTRFKNG*MAYAFS Trigger: ACTAAAGGCATAAGCCATTCAGCCGTTTTTAAACCT...GGTGCATGTGCAGGACATTCCTCTTTCACTAGTGTTCCTCATGGTCAGCTCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR GCA 90 bp | TACAAATACTGGGCAAACAGGAAGACACTCCAACAACTGCACATGTTGGGTGCTGCTTCTCTCATCATCTaGTCACACAGCTGGTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YKYWANRKTLQQLHMLGAASLII*SHSWLK Trigger: CTTTAACCAGCTGTGTGAGCAGATGATGAGAGAAGC...AGCACCCAACATGTGCAGTTGTTGGAGTGTCTTCCTGTTTGCCCAGTATTTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR CCA 90 bp | ACAAATACTGGGCAAACAGGAAGACACTCCAACAACTGCACATGTTGGGTGCTTAATGTCGGATTTTCATaGCCATCAATCCTCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TNTGQTGRHSNNCTCWVLNVGFS*PSILWG Trigger: ACCCCAGAGGATTGATGGCCATGAAAATCCGACATT...AAGCACCCAACATGTGCAGTTGTTGGAGTGTCTTCCTGTTTGCCCAGTATTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR TCA 90 bp | TACAAATACTGGGCAAACAGGAAGACACTCCAACAACTGCACATGTTGGGTGCTATGTTCCAAACTTGCTaGTCAACTAGGATTCGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: YKYWANRKTLQQLHMLGAMFQTC*STRIRN Trigger: GTTGCGAATCCTAGTTGATCAGCAAGTTTGGAACAT...AGCACCCAACATGTGCAGTTGTTGGAGTGTCTTCCTGTTTGCCCAGTATTTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR GCA 90 bp | ACTAATCTTTTCTACAGTCCAGCTGTTATCCCCCTCCTGGTCTGCCCTCTGACTTGTAGCCACATATTCTaGTATGCTTTTGAAGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: TNLFYSPAVIPLLVCPLTCSHIF*YAFEEI Trigger: GATCTCTTCAAAAGCATAGCAGAATATGTGGCTACA...AGTCAGAGGGCAGACCAGGAGGGGGATAACAGCTGGACTGTAGAAAAGATTAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR GCA 90 bp | ATTCAAACCCTAGCCTGCCTTGCTGTCTGTAGAGATGACAAAACATTTCTCCACAGCACTGCTACTCTCTaGATGTTTGTGGCAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: IQTLACLAVCRDDKTFLHSTATL*MFVAEL Trigger: AAGTTCTGCCACAAACATGCAGAGAGTAGCAGTGCT...GTGGAGAAATGTTTTGTCATCTCTACAGACAGCAAGGCAGGCTAGGGTTTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR GCA 90 bp | AACAATCCTTATAAGTGTTTGTCAGCTCACATTCAAACCCTAGCCTGCCTTGCTGCGCATTCACATTCATaGATGGCTCCATTGACACTA | + |
|
Preference number: 4 (lower is better) Translates to: NNPYKCLSAHIQTLACLAAHSHS*MAPLTL Trigger: TAGTGTCAATGGAGCCATGCATGAATGTGAATGCGC...AGCAAGGCAGGCTAGGGTTTGAATGTGAGCTGACAAACACTTATAAGGATTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR CCA 90 bp | TACAAATACTGGGCAAACAGGAAGACACTCCAACAACTGCACATGTTGGGTGCTGAGGTATCTAACAGATaGTTGCAATCCCTCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: YKYWANRKTLQQLHMLGAEVSNR*LQSLIK Trigger: TTTGATGAGGGATTGCAACCATCTGTTAGATACCTC...AGCACCCAACATGTGCAGTTGTTGGAGTGTCTTCCTGTTTGCCCAGTATTTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR CCA 90 bp | ATTCAAACCCTAGCCTGCCTTGCTGTCTGTAGAGATGACAAAACATTTCTCCACCTCTCTGCATGTTTGTaGCAGAACTTGCATCTACAT | + |
|
Preference number: 4 (lower is better) Translates to: IQTLACLAVCRDDKTFLHLSACL*QNLHLH Trigger: ATGTAGATGCAAGTTCTGCCACAAACATGCAGAGAG...GTGGAGAAATGTTTTGTCATCTCTACAGACAGCAAGGCAGGCTAGGGTTTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR TCA 90 bp | AAAGAACGAACCTTGGTTTCCTTAGTAACAGTATTTCCATCACACTCTGAACCTACCATAAGAGTGTTCTaGGGGATTCCCAGCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: KERTLVSLVTVFPSHSEPTIRVF*GIPSFT Trigger: AGTGAAGCTGGGAATCCCTCAGAACACTCTTATGGT...AGGTTCAGAGTGTGATGGAAATACTGTTACTAAGGAAACCAAGGTTCGTTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR TCA 90 bp | ACAAATACTGGGCAAACAGGAAGACACTCCAACAACTGCACATGTTGGGTGCTTTCACTGTTTGTAAGGTaGAGACATGTTTTATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TNTGQTGRHSNNCTCWVLSLFVR*RHVLCS Trigger: GGAACATAAAACATGTCTTCACCTTACAAACAGTGA...AAGCACCCAACATGTGCAGTTGTTGGAGTGTCTTCCTGTTTGCCCAGTATTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR TCA 90 bp | AAAGAACGAACCTTGGTTTCCTTAGTAACAGTATTTCCATCACACTCTGAACCTTCAGAAGAAATGTGGTaGAGACAGCCAGTCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KERTLVSLVTVFPSHSEPSEEMW*RQPVRA Trigger: TGCTCTGACTGGCTGTCTTCACCACATTTCTTCTGA...AGGTTCAGAGTGTGATGGAAATACTGTTACTAAGGAAACCAAGGTTCGTTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR GCA 90 bp | AACAATCCTTATAAGTGTTTGTCAGCTCACATTCAAACCCTAGCCTGCCTTGCTCAATTTCTTCTTAAGTaGAGATGGTGCGTCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NNPYKCLSAHIQTLACLAQFLLK*RWCVFP Trigger: GGGAAAGACGCACCATCTGCACTTAAGAAGAAATTG...AGCAAGGCAGGCTAGGGTTTGAATGTGAGCTGACAAACACTTATAAGGATTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR GCA 90 bp | TACAAATACTGGGCAAACAGGAAGACACTCCAACAACTGCACATGTTGGGTGCTAAGACTTCAAACATGTaGTGGCTATTCAAGATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YKYWANRKTLQQLHMLGAKTSNM*WLFKME Trigger: TTCCATCTTGAATAGCCAGCACATGTTTGAAGTCTT...AGCACCCAACATGTGCAGTTGTTGGAGTGTCTTCCTGTTTGCCCAGTATTTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR CCA 90 bp | ATTCAAACCCTAGCCTGCCTTGCTGTCTGTAGAGATGACAAAACATTTCTCCACATAATTATGTGGCAATaGCACATTTCTCGAGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: IQTLACLAVCRDDKTFLHIIMWQ*HISREA Trigger: CGCTTCTCGAGAAATGTGCCATTGCCACATAATTAT...GTGGAGAAATGTTTTGTCATCTCTACAGACAGCAAGGCAGGCTAGGGTTTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| 3UTR CAA 72 bp | ATACTGGTGGATAACCATTCACATCTTCCAAGGTTATaGGTGGATAACCATCCACATCTGGCTTTAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: ILVDNHSHLPRL*VDNHPHLALTW Trigger: CCATGTTAAAGCCAGATGTGGATGGTTATCCACCAATAACCTTGGAAGATGTGAATGGTTATCCACCAGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR TCA 90 bp | ATTCAAACCCTAGCCTGCCTTGCTGTCTGTAGAGATGACAAAACATTTCTCCACCATGGACATTATCTATaGCAACCTTACTGCATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IQTLACLAVCRDDKTFLHHGHYL*QPYCIH Trigger: ATGAATGCAGTAAGGTTGTCATAGATAATGTCCATG...GTGGAGAAATGTTTTGTCATCTCTACAGACAGCAAGGCAGGCTAGGGTTTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR GCA 90 bp | TACAAATACTGGGCAAACAGGAAGACACTCCAACAACTGCACATGTTGGGTGCTGACAAAAGAATGTTTTaGATCAAAGGACAGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YKYWANRKTLQQLHMLGADKRMF*IKGQSS Trigger: AGAAGACTGTCCTTTGATGCAAAACATTCTTTTGTC...AGCACCCAACATGTGCAGTTGTTGGAGTGTCTTCCTGTTTGCCCAGTATTTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR GCA 90 bp | ATTCAAACCCTAGCCTGCCTTGCTGTCTGTAGAGATGACAAAACATTTCTCCACTATCTAACAGATGGTTaGAATCCCTCATCAAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: IQTLACLAVCRDDKTFLHYLTDG*NPSSKT Trigger: TGTTTTTGATGAGGGATTGCAACCATCTGTTAGATA...GTGGAGAAATGTTTTGTCATCTCTACAGACAGCAAGGCAGGCTAGGGTTTGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR CCA 90 bp | AACAATCCTTATAAGTGTTTGTCAGCTCACATTCAAACCCTAGCCTGCCTTGCTCTTCAGATATCCTTTTaGCAATTATCCACATTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: NNPYKCLSAHIQTLACLALQISF*QLSTLL Trigger: TAGCAATGTGGATAATTGCCAAAAGGATATCTGAAG...AGCAAGGCAGGCTAGGGTTTGAATGTGAGCTGACAAACACTTATAAGGATTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR CCA 90 bp | AAAGAACGAACCTTGGTTTCCTTAGTAACAGTATTTCCATCACACTCTGAACCTTTAAAAGGACACCCATaGACATTATCTATGACAACC | + |
|
Preference number: 4 (lower is better) Translates to: KERTLVSLVTVFPSHSEPLKGHP*TLSMTT Trigger: GGTTGTCATAGATAATGTCCATGGGTGTCCTTTTAA...AGGTTCAGAGTGTGATGGAAATACTGTTACTAAGGAAACCAAGGTTCGTTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR GCA 90 bp | AAAGAACGAACCTTGGTTTCCTTAGTAACAGTATTTCCATCACACTCTGAACCTGGAAATAATTCATCATaGAAAACGAATGCACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KERTLVSLVTVFPSHSEPGNNSS*KTNAQH Trigger: ATGCTGTGCATTCGTTTTGCATGATGAATTATTTCC...AGGTTCAGAGTGTGATGGAAATACTGTTACTAAGGAAACCAAGGTTCGTTCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR CCA 90 bp | AAAGAACGAACCTTGGTTTCCTTAGTAACAGTATTTCCATCACACTCTGAACCTACTTCAAACATGTGCTaGCTATTCAAGATGGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KERTLVSLVTVFPSHSEPTSNMC*LFKMEN Trigger: ATTTTCCATCTTGAATAGCCAGCACATGTTTGAAGT...AGGTTCAGAGTGTGATGGAAATACTGTTACTAAGGAAACCAAGGTTCGTTCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS TCA 90 bp | TTGGCTTCTCTCATCATCTGCTCACACAGCTGGTTAAAGGCAGGGTaGCTGAACATCAGCTGTCTCTCAAAGCGCCTCTTGTCTTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LASLIICSHSWLKAG*LNISCLSKRLLSSD Trigger: ATCTGAAGACAAGAGGCGCTTTGAGAGACAGCTGATGTTCAGTCACCCTGCCTTTAACCAGCTGTGTGAGCAGATGATGAGAGAAGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR CAA 90 bp | CAGCCCAGGACACACCTCCACTTGCAGTGCTTGCTACATATGTGCACGGCATCCTCTTCAGATATCCTTTaGGCAATTATCCACATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QPRTHLHLQCLLHMCTASSSDIL*AIIHIA Trigger: AGCAATGTGGATAATTGCCAAAAGGATATCTGAAGA...GGATGCCGTGCACATATGTAGCAAGCACTGCAAGTGGAGGTGTGTCCTGGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR CAA 90 bp | ACTGAGCTGACCATGAGGAACACTAGTGAAAGAGGAATGTCCTGCACATGCACCCTACTCTCTGCATGTTaGTGGCAGAACTTGCATCTA | + |
|
Preference number: 5 (lower is better) Translates to: TELTMRNTSERGMSCTCTLLSAC*WQNLHL Trigger: TAGATGCAAGTTCTGCCACAAACATGCAGAGAGTAG...GGTGCATGTGCAGGACATTCCTCTTTCACTAGTGTTCCTCATGGTCAGCTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS GCA 90 bp | AGGACAACAGAGCGGAGATCCATAGCTGCTAAGACTTCAAACATGTaGTGGCTATTCAAGATGGAAAATCTGCCTAACTCCTTCAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RTTERRSIAAKTSNM*WLFKMENLPNSFKA Trigger: AGCCTTGAAGGAGTTAGGCAGATTTTCCATCTTGAATAGCCAGCACATGTTTGAAGTCTTAGCAGCTATGGATCTCCGCTCTGTTGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR CAA 90 bp | ACAAATACTGGGCAAACAGGAAGACACTCCAACAACTGCACATGTTGGGTGCTTCTCTCAAAGCGCCTCTaGTCTTCAGATATCCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TNTGQTGRHSNNCTCWVLLSKRL*SSDILL Trigger: CAAAAGGATATCTGAAGACAAGAGGCGCTTTGAGAG...AAGCACCCAACATGTGCAGTTGTTGGAGTGTCTTCCTGTTTGCCCAGTATTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS TCA 90 bp | CCAATGGATCTATCCTCAAAGCTCTGCTTCTTGGAAGTAACGTACTaGATCGTCGGATGGTCCATAACAAGGAACGTGCTTTGCTATTCA | + |
|
Preference number: 5 (lower is better) Translates to: PMDLSSKLCFLEVTY*IVGWSITRNVLCYS Trigger: TGAATAGCAAAGCACGTTCCTTGTTATGGACCATCCGACGATTCAGTACGTTACTTCCAAGAAGCAGAGCTTTGAGGATAGATCCATTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS CCA 90 bp | ACAACAGAGCGGAGATCCATAGCTGCTAAGACTTCAAACATGTGCTaGCTATTCAAGATGGAAAATCTGCCTAACTCCTTCAAGGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TTERRSIAAKTSNMC*LFKMENLPNSFKAF Trigger: GAAAGCCTTGAAGGAGTTAGGCAGATTTTCCATCTTGAATAGCCAGCACATGTTTGAAGTCTTAGCAGCTATGGATCTCCGCTCTGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR CAA 90 bp | TACAAATACTGGGCAAACAGGAAGACACTCCAACAACTGCACATGTTGGGTGCTGTTGGTCTTACTTTCTaGGTGAACACATCTTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: YKYWANRKTLQQLHMLGAVGLTF*VNTSSL Trigger: CAGTGAAGATGTGTTCACCAAGAAAGTAAGACCAAC...AGCACCCAACATGTGCAGTTGTTGGAGTGTCTTCCTGTTTGCCCAGTATTTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
||
| CDS-3UTR CAA 90 bp | ATTCAAACCCTAGCCTGCCTTGCTGTCTGTAGAGATGACAAAACATTTCTCCACACTTTCTCCATAAGCTaGTCCATCAAACCAGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: IQTLACLAVCRDDKTFLHTFSIS*SIKPGG Trigger: ACCTCCTGGTTTGATGGACAAGCTTATGGAGAAAGT...GTGGAGAAATGTTTTGTCATCTCTACAGACAGCAAGGCAGGCTAGGGTTTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| CDS-3UTR CAA 90 bp | TACAAATACTGGGCAAACAGGAAGACACTCCAACAACTGCACATGTTGGGTGCTTTAGCCGATGGTTTCTaGGGTTCCATTTTGAATGAA | + |
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Preference number: 5 (lower is better) Translates to: YKYWANRKTLQQLHMLGALADGF*GSILNE Trigger: TTCATTCAAAATGGAACCCAAGAAACCATCGGCTAA...AGCACCCAACATGTGCAGTTGTTGGAGTGTCTTCCTGTTTGCCCAGTATTTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| CDS TCA 90 bp | ATCACTGTTTGTAAGGTGAAGACATGTTTTATGTTCCAAACTTGCTaGTCAACTAGGATTCGCAACCCTGCTCGAAGCGCATTCACATTC | + |
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Preference number: 5 (lower is better) Translates to: ITVCKVKTCFMFQTC*STRIRNPARSAFTF Trigger: GAATGTGAATGCGCTTCGAGCAGGGTTGCGAATCCTAGTTGATCAGCAAGTTTGGAACATAAAACATGTCTTCACCTTACAAACAGTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| CDS-3UTR CAA 90 bp | ACAAATACTGGGCAAACAGGAAGACACTCCAACAACTGCACATGTTGGGTGCTTGAAGTCAGCAGTTCGTaGATGATATTCTCTTTGATA | + |
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Preference number: 5 (lower is better) Translates to: TNTGQTGRHSNNCTCWVLEVSSS*MIFSLI Trigger: TATCAAAGAGAATATCATCAACGAACTGCTGACTTC...AAGCACCCAACATGTGCAGTTGTTGGAGTGTCTTCCTGTTTGCCCAGTATTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| CDS CCA 90 bp | GTTGTAGCCACATATTCTGCTATGCTTTTGAAGAGATCTTCATTTTaGTATCGGAGGTCTCTACAGGACTGCAGTATGCTGATCAATACT | + |
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Preference number: 5 (lower is better) Translates to: VVATYSAMLLKRSSF*YRRSLQDCSMLINT Trigger: AGTATTGATCAGCATACTGCAGTCCTGTAGAGACCTCCGATACCAAAATGAAGATCTCTTCAAAAGCATAGCAGAATATGTGGCTACAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| CDS TCA 90 bp | TCATCAAAAACATTTAGCCGATGGTTTCTTGGGTTCCATTTTGAATaGATAACCTCTGGTCTGCAAGTTCCCAATGGATCTATCCTCAAA | + |
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Preference number: 5 (lower is better) Translates to: SSKTFSRWFLGFHFE*ITSGLQVPNGSILK Trigger: TTTGAGGATAGATCCATTGGGAACTTGCAGACCAGAGGTTATTCATTCAAAATGGAACCCAAGAAACCATCGGCTAAATGTTTTTGATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| CDS TCA 90 bp | CAGATGGTGCGTCTTTCCCAATACATTTCATCACTGTTTGTAAGGTaGAGACATGTTTTATGTTCCAAACTTGCTGATCAACTAGGATTC | + |
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Preference number: 5 (lower is better) Translates to: QMVRLSQYISSLFVR*RHVLCSKLADQLGF Trigger: GAATCCTAGTTGATCAGCAAGTTTGGAACATAAAACATGTCTTCACCTTACAAACAGTGATGAAATGTATTGGGAAAGACGCACCATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| CDS-3UTR CAA 90 bp | AAAGAACGAACCTTGGTTTCCTTAGTAACAGTATTTCCATCACACTCTGAACCTAAGCGGTTGACAAAATaGAAAGACATCTCTCATCAC | + |
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Preference number: 5 (lower is better) Translates to: KERTLVSLVTVFPSHSEPKRLTK*KDISHH Trigger: GTGATGAGAGATGTCTTTCAATTTTGTCAACCGCTT...AGGTTCAGAGTGTGATGGAAATACTGTTACTAAGGAAACCAAGGTTCGTTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| CDS-3UTR CAA 90 bp | AAAGAACGAACCTTGGTTTCCTTAGTAACAGTATTTCCATCACACTCTGAACCTTGTTTGTGGCAGAACTaGCATCTACATCAGAAAATG | + |
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Preference number: 5 (lower is better) Translates to: KERTLVSLVTVFPSHSEPCLWQN*HLHQKM Trigger: CATTTTCTGATGTAGATGCAAGTTCTGCCACAAACA...AGGTTCAGAGTGTGATGGAAATACTGTTACTAAGGAAACCAAGGTTCGTTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| CDS-3UTR CAA 90 bp | AAAGAACGAACCTTGGTTTCCTTAGTAACAGTATTTCCATCACACTCTGAACCTGAGGAAAAAGATAACTaGTTTCAACTTCCAGATGTC | + |
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Preference number: 5 (lower is better) Translates to: KERTLVSLVTVFPSHSEPEEKDN*FQLPDV Trigger: GACATCTGGAAGTTGAAACAAGTTATCTTTTTCCTC...AGGTTCAGAGTGTGATGGAAATACTGTTACTAAGGAAACCAAGGTTCGTTCTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| CDS TCA 72 bp | CTCATCATCTGCTCACACAGCTGGTTAAAGGCAGGGTaGCTGAACATCAGCTGTCTCTCAAAGCGCCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: LIICSHSWLKAG*LNISCLSKRLL Trigger: CAAGAGGCGCTTTGAGAGACAGCTGATGTTCAGTCACCCTGCCTTTAACCAGCTGTGTGAGCAGATGATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| CDS TCA 72 bp | CTATCCTCAAAGCTCTGCTTCTTGGAAGTAACGTACTaGATCGTCGGATGGTCCATAACAAGGAACGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: LSSKLCFLEVTY*IVGWSITRNVL Trigger: AAGCACGTTCCTTGTTATGGACCATCCGACGATTCAGTACGTTACTTCCAAGAAGCAGAGCTTTGAGGATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| CDS TCA 72 bp | ATCGTCCTCAGCAAAGTCTGTACCATAAGAGTGTTCTaGGGGATTCCCAGCTTCACTATAGCATTAAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: IVLSKVCTIRVF*GIPSFTIALRL Trigger: CAGCCTTAATGCTATAGTGAAGCTGGGAATCCCTCAGAACACTCTTATGGTACAGACTTTGCTGAGGACGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| CDS TCA 72 bp | TTACACGGTTGTGTCAGCAGTGGGAAGCACTTCATCTaGATAGATCTTCTTCCTCACAAATGTGACCGCATC | + |
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Preference number: 6 (lower is better) Translates to: LHGCVSSGKHFI*IDLLPHKCDRI Trigger: GATGCGGTCACATTTGTGAGGAAGAAGATCTATTCAGATGAAGTGCTTCCCACTGCTGACACAACCGTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| CDS GCA 72 bp | GAGCGGAGATCCATAGCTGCTAAGACTTCAAACATGTaGTGGCTATTCAAGATGGAAAATCTGCCTAACTCC | + |
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Preference number: 6 (lower is better) Translates to: ERRSIAAKTSNM*WLFKMENLPNS Trigger: GGAGTTAGGCAGATTTTCCATCTTGAATAGCCAGCACATGTTTGAAGTCTTAGCAGCTATGGATCTCCGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| CDS TCA 72 bp | TGTAAGGTGAAGACATGTTTTATGTTCCAAACTTGCTaGTCAACTAGGATTCGCAACCCTGCTCGAAGCGCA | + |
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Preference number: 6 (lower is better) Translates to: CKVKTCFMFQTC*STRIRNPARSA Trigger: TGCGCTTCGAGCAGGGTTGCGAATCCTAGTTGATCAGCAAGTTTGGAACATAAAACATGTCTTCACCTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| CDS CCA 72 bp | CGGAGATCCATAGCTGCTAAGACTTCAAACATGTGCTaGCTATTCAAGATGGAAAATCTGCCTAACTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: RRSIAAKTSNMC*LFKMENLPNSF Trigger: GAAGGAGTTAGGCAGATTTTCCATCTTGAATAGCCAGCACATGTTTGAAGTCTTAGCAGCTATGGATCTCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| CDS CAA 72 bp | ACAGCACTGCTACTCTCTGCATGTTTGTGGCAGAACTaGCATCTACATCAGAAAATGAAAATACTTGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: TALLLSACLWQN*HLHQKMKILGS Trigger: GGACCCAAGTATTTTCATTTTCTGATGTAGATGCAAGTTCTGCCACAAACATGCAGAGAGTAGCAGTGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| CDS CAA 90 bp | GGTTGTAGCCACATATTCTGCTATGCTTTTGAAGAGATCTTCATTTaGGTATCGGAGGTCTCTACAGGACTGCAGTATGCTGATCAATAC | + |
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Preference number: 6 (lower is better) Translates to: GCSHIFCYAFEEIFI*VSEVSTGLQYADQY Trigger: GTATTGATCAGCATACTGCAGTCCTGTAGAGACCTCCGATACCAAAATGAAGATCTCTTCAAAAGCATAGCAGAATATGTGGCTACAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| CDS CAA 90 bp | AACTTCCAGATGTCAAAGGTTGTAGCCACATATTCTGCTATGCTTTaGAAGAGATCTTCATTTTGGTATCGGAGGTCTCTACAGGACTGC | + |
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Preference number: 6 (lower is better) Translates to: NFQMSKVVATYSAML*KRSSFWYRRSLQDC Trigger: GCAGTCCTGTAGAGACCTCCGATACCAAAATGAAGATCTCTTCAAAAGCATAGCAGAATATGTGGCTACAACCTTTGACATCTGGAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| CDS CAA 90 bp | TTCACGTTTAGAGAGCCAGGCTCCTGTACTACTTTCTCCATAAGCTaGTCCATCAAACCAGGAGGTCGAAAACCAAGAGTTTCAAATAAT | + |
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Preference number: 6 (lower is better) Translates to: FTFREPGSCTTFSIS*SIKPGGRKPRVSNN Trigger: ATTATTTGAAACTCTTGGTTTTCGACCTCCTGGTTTGATGGACAAGCTTATGGAGAAAGTAGTACAGGAGCCTGGCTCTCTAAACGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| CDS CCA 72 bp | ACATATTCTGCTATGCTTTTGAAGAGATCTTCATTTTaGTATCGGAGGTCTCTACAGGACTGCAGTATGCTG | + |
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Preference number: 6 (lower is better) Translates to: TYSAMLLKRSSF*YRRSLQDCSML Trigger: CAGCATACTGCAGTCCTGTAGAGACCTCCGATACCAAAATGAAGATCTCTTCAAAAGCATAGCAGAATATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| CDS CAA 72 bp | CACATATTCTGCTATGCTTTTGAAGAGATCTTCATTTaGGTATCGGAGGTCTCTACAGGACTGCAGTATGCT | + |
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Preference number: 6 (lower is better) Translates to: HIFCYAFEEIFI*VSEVSTGLQYA Trigger: AGCATACTGCAGTCCTGTAGAGACCTCCGATACCAAAATGAAGATCTCTTCAAAAGCATAGCAGAATATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| CDS CCA 72 bp | CAAGGCTTTCATCTCCAATTTCTTCTTAAGTGCAGATaGTGCGTCTTTCCCAATACATTTCATCACTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: QGFHLQFLLKCR*CVFPNTFHHCL Trigger: CAAACAGTGATGAAATGTATTGGGAAAGACGCACCATCTGCACTTAAGAAGAAATTGGAGATGAAAGCCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| CDS CAA 72 bp | TCACATTCATGCATGGCTCCATTGACACTAAAGCGGTaGACAAAATTGAAAGACATCTCTCATCACACTCAT | + |
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Preference number: 6 (lower is better) Translates to: SHSCMAPLTLKR*TKLKDISHHTH Trigger: ATGAGTGTGATGAGAGATGTCTTTCAATTTTGTCAACCGCTTTAGTGTCAATGGAGCCATGCATGAATGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| CDS CAA 72 bp | ATATTCTTCTCTGTGTCACCCGAAGTCAGCAGTTCGTaGATGATATTCTCTTTGATAAGCTGGTTAATAGGG | + |
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Preference number: 6 (lower is better) Translates to: IFFSVSPEVSSS*MIFSLISWLIG Trigger: CCCTATTAACCAGCTTATCAAAGAGAATATCATCAACGAACTGCTGACTTCGGGTGACACAGAGAAGAATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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| CDS CAA 72 bp | ATGTCAAAGGTTGTAGCCACATATTCTGCTATGCTTTaGAAGAGATCTTCATTTTGGTATCGGAGGTCTCTA | + |
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Preference number: 6 (lower is better) Translates to: MSKVVATYSAML*KRSSFWYRRSL Trigger: TAGAGACCTCCGATACCAAAATGAAGATCTCTTCAAAAGCATAGCAGAATATGTGGCTACAACCTTTGACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027103.7 |
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