Pregenerated sensors for FASTKD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027086Ensembl transcript IDs: ENSMUST00000073152.13, ENSMUST00000102706.4
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGATTTATTTATTTATTTATTTATTATGTATACAGTGTTCTGCCTaGATGTATGCCTGCAGGCCAGAAGAGGGTCCCAGATCACATTAT | + |
|
Preference number: 1 (lower is better) Translates to: KIYLFIYLLCIQCSA*MYACRPEEGPRSHY Trigger: ATAATGTGATCTGGGACCCTCTTCTGGCCTGCAGGCATACATGCAGGCAGAACACTGTATACATAATAAATAAATAAATAAATAAATCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| 3UTR-3UTR GCA 90 bp | TACAGTGTTCTGCCTGCATGTATGCCTGCAGGCCAGAAGAGGGTCCCAGATCACTGTTCTTTTCCTCTGTaGCACCTCTCCAGTCCACCA | + |
|
Preference number: 2 (lower is better) Translates to: YSVLPACMPAGQKRVPDHCSFPL*HLSSPP Trigger: TGGTGGACTGGAGAGGTGGCACAGAGGAAAAGAACA...GTGATCTGGGACCCTCTTCTGGCCTGCAGGCATACATGCAGGCAGAACACTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| 3UTR GCA 72 bp | GATCACATTATAGATGGTTATGAGCCGCCATGTGGGTaGTGGGGATTGAACTTAGGATCTCTGCAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DHIIDGYEPPCG*WGLNLGSLQEQ Trigger: CTGCTCTTGCAGAGATCCTAAGTTCAATCCCCAGCACCCACATGGCGGCTCATAACCATCTATAATGTGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| 3UTR GCA 72 bp | TTATTATGTATACAGTGTTCTGCCTGCATGTATGCCTaGAGGCCAGAAGAGGGTCCCAGATCACATTATAGA | + |
|
Preference number: 3 (lower is better) Translates to: LLCIQCSACMYA*RPEEGPRSHYR Trigger: TCTATAATGTGATCTGGGACCCTCTTCTGGCCTGCAGGCATACATGCAGGCAGAACACTGTATACATAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| 3UTR GCA 72 bp | TTATTTATTATGTATACAGTGTTCTGCCTGCATGTATaGCTGCAGGCCAGAAGAGGGTCCCAGATCACATTA | + |
|
Preference number: 3 (lower is better) Translates to: LFIMYTVFCLHV*LQARRGSQITL Trigger: TAATGTGATCTGGGACCCTCTTCTGGCCTGCAGGCATACATGCAGGCAGAACACTGTATACATAATAAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR CCA 90 bp | CAGTGTTCTGCCTGCATGTATGCCTGCAGGCCAGAAGAGGGTCCCAGATCACATACGATCAGCGCTTGCTaGCTGCTCAGCTCCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QCSACMYACRPEEGPRSHTISAC*LLSSSD Trigger: GTCAGAGGAGCTGAGCAGCCAGCAAGCGCTGATCGT...ATGTGATCTGGGACCCTCTTCTGGCCTGCAGGCATACATGCAGGCAGAACACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR GCA 90 bp | GATGGTTATGAGCCGCCATGTGGGTGCTGGGGATTGAACTTAGGATCTCTGCAATCAGCGCTTGCTGGCTaGTCAGCTCCTCTGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DGYEPPCGCWGLNLGSLQSALAG*SAPLTA Trigger: TGCTGTCAGAGGAGCTGAGCAGCCAGCAAGCGCTGA...TTGCAGAGATCCTAAGTTCAATCCCCAGCACCCACATGGCGGCTCATAACCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR CCA 90 bp | CAGTGTTCTGCCTGCATGTATGCCTGCAGGCCAGAAGAGGGTCCCAGATCACATACTGAGGTGCGGATGTaGAAGCATGGACAGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QCSACMYACRPEEGPRSHTEVRM*KHGQSR Trigger: TCTGCTCTGTCCATGCTTCCACATCCGCACCTCAGT...ATGTGATCTGGGACCCTCTTCTGGCCTGCAGGCATACATGCAGGCAGAACACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR CCA 90 bp | GATGGTTATGAGCCGCCATGTGGGTGCTGGGGATTGAACTTAGGATCTCTGCAAGCGGTCATGAAACCATaGAACCTGCAGCTCGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DGYEPPCGCWGLNLGSLQAVMKP*NLQLGA Trigger: TGCCCCGAGCTGCAGGTTCCATGGTTTCATGACCGC...TTGCAGAGATCCTAAGTTCAATCCCCAGCACCCACATGGCGGCTCATAACCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR CCA 90 bp | AGGGTCCCAGATCACATTATAGATGGTTATGAGCCGCCATGTGGGTGCTGGGGAGCGGATGTGGAAGCATaGACAGAGCAGAGACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RVPDHIIDGYEPPCGCWGADVEA*TEQRPE Trigger: TTCTGGTCTCTGCTCTGTCCATGCTTCCACATCCGC...TCCCCAGCACCCACATGGCGGCTCATAACCATCTATAATGTGATCTGGGACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR CCA 90 bp | TACAGTGTTCTGCCTGCATGTATGCCTGCAGGCCAGAAGAGGGTCCCAGATCACACAGAAGATCCAAGTTaGTGCTCTGTTGCAGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: YSVLPACMPAGQKRVPDHTEDPS*CSVAAG Trigger: ACCGGCTGCAACAGAGCACCAACTTGGATCTTCTGT...GTGATCTGGGACCCTCTTCTGGCCTGCAGGCATACATGCAGGCAGAACACTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR CCA 90 bp | TATACAGTGTTCTGCCTGCATGTATGCCTGCAGGCCAGAAGAGGGTCCCAGATCGAAGGCTTCACACATTaGTGTCCTCCCAGGACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YTVFCLHVCLQARRGSQIEGFTH*CPPRTS Trigger: AGAGGTCCTGGGAGGACACCAATGTGTGAAGCCTTC...GATCTGGGACCCTCTTCTGGCCTGCAGGCATACATGCAGGCAGAACACTGTATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR GCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCATCAGCGCTTGCTGGCTaGTCAGCTCCTCTGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPSALAG*SAPLTA Trigger: TGCTGTCAGAGGAGCTGAGCAGCCAGCAAGCGCTGA...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR GCA 90 bp | GTATACAGTGTTCTGCCTGCATGTATGCCTGCAGGCCAGAAGAGGGTCCCAGATTTGAATCCCAGTGCATaGCCAGGGATTTTCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VYSVLPACMPAGQKRVPDLNPSA*PGIFWE Trigger: CTCCCAGAAAATCCCTGGGCATGCACTGGGATTCAA...ATCTGGGACCCTCTTCTGGCCTGCAGGCATACATGCAGGCAGAACACTGTATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR CCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCAACGATCAGCGCTTGCTaGCTGCTCAGCTCCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPTISAC*LLSSSD Trigger: GTCAGAGGAGCTGAGCAGCCAGCAAGCGCTGATCGT...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR CCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCAGCGGTCATGAAACCATaGAACCTGCAGCTCGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPAVMKP*NLQLGA Trigger: TGCCCCGAGCTGCAGGTTCCATGGTTTCATGACCGC...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR TCA 90 bp | AGGGTCCCAGATCACATTATAGATGGTTATGAGCCGCCATGTGGGTGCTGGGGACTCTATTTAACTCCATaGGGCGGAACTGGATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RVPDHIIDGYEPPCGCWGLYLTP*GGTGSL Trigger: CAAGGATCCAGTTCCGCCTCATGGAGTTAAATAGAG...TCCCCAGCACCCACATGGCGGCTCATAACCATCTATAATGTGATCTGGGACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR TCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCACCTTGGCTCAACTCTTaGATCCCAGTGCATGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPPWLNS*IPVHAQ Trigger: CTGGGCATGCACTGGGATTCAAGAGTTGAGCCAAGG...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| 3UTR CAA 72 bp | ATAGATGGTTATGAGCCGCCATGTGGGTGCTGGGGATaGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IDGYEPPCGCWG*NLGSLQEQPVF Trigger: GAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCCCCAGCACCCACATGGCGGCTCATAACCATCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR TCA 90 bp | CCGCCATGTGGGTGCTGGGGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGCAAAGAGTAAGAAACTaGGGATGGTTTCTAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: PPCGCWGLNLGSLQEQPVQRVRN*GWFLTW Trigger: CCATGTTAGAAACCATCCTCAGTTTCTTACTCTTTG...CACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCCCCAGCACCCACATGGCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR TCA 90 bp | GTATACAGTGTTCTGCCTGCATGTATGCCTGCAGGCCAGAAGAGGGTCCCAGATAAAGAAGTTCTGTTCTaGTCACCAGTCGTTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VYSVLPACMPAGQKRVPDKEVLF*SPVVPG Trigger: TCCAGGAACGACTGGTGATCAGAACAGAACTTCTTT...ATCTGGGACCCTCTTCTGGCCTGCAGGCATACATGCAGGCAGAACACTGTATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR GCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCAGCTGTTTCACTGAGGTaGGGATGTGGAAGCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPAVSLR*GCGSMD Trigger: GTCCATGCTTCCACATCCGCACCTCAGTGAAACAGC...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR CCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCAGCGGATGTGGAAGCATaGACAGAGCAGAGACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPADVEA*TEQRPE Trigger: TTCTGGTCTCTGCTCTGTCCATGCTTCCACATCCGC...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR CCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCAACTGAGGTGCGGATGTaGAAGCATGGACAGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPTEVRM*KHGQSR Trigger: TCTGCTCTGTCCATGCTTCCACATCCGCACCTCAGT...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR CCA 90 bp | CCGCCATGTGGGTGCTGGGGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGGTTCAGAATGCTGAATaGGAGAATAATAGCAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PPCGCWGLNLGSLQEQPVVQNAE*ENNSKD Trigger: GTCCTTGCTATTATTCTCCCATTCAGCATTCTGAAC...CACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCCCCAGCACCCACATGGCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR CCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCAGAAGGCTTCACACATTaGTGTCCTCCCAGGACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPEGFTH*CPPRTS Trigger: AGAGGTCCTGGGAGGACACCAATGTGTGAAGCCTTC...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR GCA 90 bp | TATACAGTGTTCTGCCTGCATGTATGCCTGCAGGCCAGAAGAGGGTCCCAGATCTTCCAGTCTTTTCCATaGTTCTGTAACCAGTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YTVFCLHVCLQARRGSQIFQSFP*FCNQCF Trigger: GAAGCACTGGTTACAGAAGCATGGAAAAGACTGGAA...GATCTGGGACCCTCTTCTGGCCTGCAGGCATACATGCAGGCAGAACACTGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR GCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCATTGAATCCCAGTGCATaGCCAGGGATTTTCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPLNPSA*PGIFWE Trigger: CTCCCAGAAAATCCCTGGGCATGCACTGGGATTCAA...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR GCA 90 bp | TACAGTGTTCTGCCTGCATGTATGCCTGCAGGCCAGAAGAGGGTCCCAGATCACCCCAAGATTTCCAAATaGCGCTTTTTCATAGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: YSVLPACMPAGQKRVPDHPKISK*RFFIAD Trigger: ATCTGCTATGAAAAAGCGGCATTTGGAAATCTTGGG...GTGATCTGGGACCCTCTTCTGGCCTGCAGGCATACATGCAGGCAGAACACTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR CCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCAACAGAAGATCCAAGTTaGTGCTCTGTTGCAGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPTEDPS*CSVAAG Trigger: ACCGGCTGCAACAGAGCACCAACTTGGATCTTCTGT...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR TCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCACTCTATTTAACTCCATaGGGCGGAACTGGATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPLYLTP*GGTGSL Trigger: CAAGGATCCAGTTCCGCCTCATGGAGTTAAATAGAG...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR GCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCATTCCATATCTTCCATTaGTCCCAACACGATCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPFHIFH*SQHDQR Trigger: GCGCTGATCGTGTTGGGAGCAATGGAAGATATGGAA...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR CCA 90 bp | AGGGTCCCAGATCACATTATAGATGGTTATGAGCCGCCATGTGGGTGCTGGGGAGACTCCAGATCAAGATaGCTCATGTTCCTTATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RVPDHIIDGYEPPCGCWGDSRSR*LMFLIN Trigger: GTTTATAAGGAACATGAGCCATCTTGATCTGGAGTC...TCCCCAGCACCCACATGGCGGCTCATAACCATCTATAATGTGATCTGGGACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR CCA 90 bp | CAGTGTTCTGCCTGCATGTATGCCTGCAGGCCAGAAGAGGGTCCCAGATCACATTTCATCCTTTTGAGGTaGATCATAGTTCAGAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: QCSACMYACRPEEGPRSHFILLR*IIVQNA Trigger: AGCATTCTGAACTATGATCCACCTCAAAAGGATGAA...ATGTGATCTGGGACCCTCTTCTGGCCTGCAGGCATACATGCAGGCAGAACACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR TCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCAAGTCATTCAGTTCCCTaGAGTCACACTGTGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPSHSVP*SHTVVE Trigger: TTCTACCACAGTGTGACTTCAGGGAACTGAATGACT...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR GCA 90 bp | ACAGTGTTCTGCCTGCATGTATGCCTGCAGGCCAGAAGAGGGTCCCAGATCACAGATTCAACTGCAAACTaGTTTATGCTGTATAACACA | + |
|
Preference number: 4 (lower is better) Translates to: TVFCLHVCLQARRGSQITDSTAN*FMLYNT Trigger: TGTGTTATACAGCATAAAGCAGTTTGCAGTTGAATC...TGTGATCTGGGACCCTCTTCTGGCCTGCAGGCATACATGCAGGCAGAACACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR GCA 90 bp | GATGGTTATGAGCCGCCATGTGGGTGCTGGGGATTGAACTTAGGATCTCTGCAAGTGATGGGATTCAACTaGAAACTGCTTTATGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: DGYEPPCGCWGLNLGSLQVMGFN*KLLYAV Trigger: TACAGCATAAAGCAGTTTGCAGTTGAATCCCATCAC...TTGCAGAGATCCTAAGTTCAATCCCCAGCACCCACATGGCGGCTCATAACCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR CCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCAGATCGGCCAAGCAAGTaGAAAATATGGACAGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPDRPSK*KIWTAH Trigger: ATGTGCTGTCCATATTTTCCACTTGCTTGGCCGATC...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR CCA 90 bp | ATAGATGGTTATGAGCCGCCATGTGGGTGCTGGGGATTGAACTTAGGATCTCTGCCCTTAAGTCCTGGATaGTTTCCAGTCTCCTATTTA | + |
|
Preference number: 4 (lower is better) Translates to: IDGYEPPCGCWGLNLGSLPLSPG*FPVSYL Trigger: TAAATAGGAGACTGGAAACCATCCAGGACTTAAGGG...CAGAGATCCTAAGTTCAATCCCCAGCACCCACATGGCGGCTCATAACCATCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR TCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCAACGGTCTTCTGCTTCTaGAACTGCCAAAGTACATTA | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPTVFCF*NCQSTL Trigger: TAATGTACTTTGGCAGTTTCAGAAGCAGAAGACCGT...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR GCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCATTCCAGTCTTTTCCATaGTTCTGTAACCAGTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPFQSFP*FCNQCF Trigger: GAAGCACTGGTTACAGAAGCATGGAAAAGACTGGAA...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR GCA 90 bp | GTATACAGTGTTCTGCCTGCATGTATGCCTGCAGGCCAGAAGAGGGTCCCAGATTTCGTTTATCCAAAATaGATTCAAAACCCACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VYSVLPACMPAGQKRVPDFVYPK*IQNPLC Trigger: ACACAGTGGGTTTTGAATGCATTTTGGATAAACGAA...ATCTGGGACCCTCTTCTGGCCTGCAGGCATACATGCAGGCAGAACACTGTATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR TCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCACAAAGAGTAAGAAACTaGGGATGGTTTCTAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPQRVRN*GWFLTW Trigger: CCATGTTAGAAACCATCCTCAGTTTCTTACTCTTTG...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR GCA 90 bp | GCATGTATGCCTGCAGGCCAGAAGAGGGTCCCAGATCACATTATAGATGGTTATCTGCAAACTGCTTTATaGTGTATAACACATCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ACMPAGQKRVPDHIIDGYLQTAL*CITHPP Trigger: TGGTGGATGTGTTATACAGCATAAAGCAGTTTGCAG...ATAACCATCTATAATGTGATCTGGGACCCTCTTCTGGCCTGCAGGCATACATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR GCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCACTGCAAACTGCTTTATaGTGTATAACACATCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPLQTAL*CITHPP Trigger: TGGTGGATGTGTTATACAGCATAAAGCAGTTTGCAG...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR GCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCACCCAAGATTTCCAAATaGCGCTTTTTCATAGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPPKISK*RFFIAD Trigger: ATCTGCTATGAAAAAGCGGCATTTGGAAATCTTGGG...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR CCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCAGACTCCAGATCAAGATaGCTCATGTTCCTTATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPDSRSR*LMFLIN Trigger: GTTTATAAGGAACATGAGCCATCTTGATCTGGAGTC...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR CCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCAGTTCAGAATGCTGAATaGGAGAATAATAGCAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPVQNAE*ENNSKD Trigger: GTCCTTGCTATTATTCTCCCATTCAGCATTCTGAAC...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR CCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCAGGTAAAATTTCAAGCTaGGAATCTAATCTGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPGKISS*ESNLAR Trigger: CCTTGCCAGATTAGATTCCCAGCTTGAAATTTTACC...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR TCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCATCCTTCTTGCAATGTTaGCTTTGGAAGAATTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPSFLQC*LWKNLQ Trigger: CTGTAAATTCTTCCAAAGTCAACATTGCAAGAAGGA...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR CCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCAAGCATCACTCATTGCTaGGATGTGATTTGTTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPSITHC*DVICCN Trigger: ATTACAACAAATCACATCCCAGCAATGAGTGATGCT...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR CCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCATTCATCCTTTTGAGGTaGATCATAGTTCAGAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPFILLR*IIVQNA Trigger: AGCATTCTGAACTATGATCCACCTCAAAAGGATGAA...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR GCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCAGATTCAACTGCAAACTaGTTTATGCTGTATAACACA | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPDSTAN*FMLYNT Trigger: TGTGTTATACAGCATAAAGCAGTTTGCAGTTGAATC...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR GCA 90 bp | TTATTTATTTATTATGTATACAGTGTTCTGCCTGCATGTATGCCTGCAGGCCAGTTCCATATCTTCCATTaGTCCCAACACGATCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LFIYYVYSVLPACMPAGQFHIFH*SQHDQR Trigger: GCGCTGATCGTGTTGGGAGCAATGGAAGATATGGAA...CTGGCCTGCAGGCATACATGCAGGCAGAACACTGTATACATAATAAATAAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR GCA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCATTCGTTTATCCAAAATaGATTCAAAACCCACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPFVYPK*IQNPLC Trigger: ACACAGTGGGTTTTGAATGCATTTTGGATAAACGAA...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR CCA 90 bp | TTATTTATTTATTATGTATACAGTGTTCTGCCTGCATGTATGCCTGCAGGCCAGGATCGGCCAAGCAAGTaGAAAATATGGACAGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: LFIYYVYSVLPACMPAGQDRPSK*KIWTAH Trigger: ATGTGCTGTCCATATTTTCCACTTGCTTGGCCGATC...CTGGCCTGCAGGCATACATGCAGGCAGAACACTGTATACATAATAAATAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR TCA 90 bp | TTATTTATTTATTATGTATACAGTGTTCTGCCTGCATGTATGCCTGCAGGCCAGACGGTCTTCTGCTTCTaGAACTGCCAAAGTACATTA | + |
|
Preference number: 4 (lower is better) Translates to: LFIYYVYSVLPACMPAGQTVFCF*NCQSTL Trigger: TAATGTACTTTGGCAGTTTCAGAAGCAGAAGACCGT...CTGGCCTGCAGGCATACATGCAGGCAGAACACTGTATACATAATAAATAAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR TCA 90 bp | TTATTTATTTATTATGTATACAGTGTTCTGCCTGCATGTATGCCTGCAGGCCAGTCCTTCTTGCAATGTTaGCTTTGGAAGAATTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: LFIYYVYSVLPACMPAGQSFLQC*LWKNLQ Trigger: CTGTAAATTCTTCCAAAGTCAACATTGCAAGAAGGA...CTGGCCTGCAGGCATACATGCAGGCAGAACACTGTATACATAATAAATAAATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR CCA 90 bp | TTATTTATTTATTATGTATACAGTGTTCTGCCTGCATGTATGCCTGCAGGCCAGAGCATCACTCATTGCTaGGATGTGATTTGTTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LFIYYVYSVLPACMPAGQSITHC*DVICCN Trigger: ATTACAACAAATCACATCCCAGCAATGAGTGATGCT...CTGGCCTGCAGGCATACATGCAGGCAGAACACTGTATACATAATAAATAAATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR CAA 90 bp | TACAGTGTTCTGCCTGCATGTATGCCTGCAGGCCAGAAGAGGGTCCCAGATCACGGAAGGCTTCACACATaGGTGTCCTCCCAGGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: YSVLPACMPAGQKRVPDHGRLHT*VSSQDL Trigger: GAGGTCCTGGGAGGACACCAATGTGTGAAGCCTTCC...GTGATCTGGGACCCTCTTCTGGCCTGCAGGCATACATGCAGGCAGAACACTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR CAA 90 bp | TACAGTGTTCTGCCTGCATGTATGCCTGCAGGCCAGAAGAGGGTCCCAGATCACGCCTTGGCTCAACTCTaGAATCCCAGTGCATGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: YSVLPACMPAGQKRVPDHALAQL*NPSACP Trigger: TGGGCATGCACTGGGATTCAAGAGTTGAGCCAAGGC...GTGATCTGGGACCCTCTTCTGGCCTGCAGGCATACATGCAGGCAGAACACTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS CCA 90 bp | AACTGCTTCAATCCGGGAGACCGCTGTTTCACTGAGGTGCGGATGTaGAAGCATGGACAGAGCAGAGACCAGAACAGAAATCTCACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: NCFNPGDRCFTEVRM*KHGQSRDQNRNLTG Trigger: CCCAGTGAGATTTCTGTTCTGGTCTCTGCTCTGTCCATGCTTCCACATCCGCACCTCAGTGAAACAGCGGTCTCCCGGATTGAAGCAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS GCA 90 bp | TGTGGTAGAACTGCTTCAATCCGGGAGACCGCTGTTTCACTGAGGTaGGGATGTGGAAGCATGGACAGAGCAGAGACCAGAACAGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: CGRTASIRETAVSLR*GCGSMDRAETRTEI Trigger: GATTTCTGTTCTGGTCTCTGCTCTGTCCATGCTTCCACATCCGCACCTCAGTGAAACAGCGGTCTCCCGGATTGAAGCAGTTCTACCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR CAA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCAGGAAGGCTTCACACATaGGTGTCCTCCCAGGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPGRLHT*VSSQDL Trigger: GAGGTCCTGGGAGGACACCAATGTGTGAAGCCTTCC...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR CAA 90 bp | GATGGTTATGAGCCGCCATGTGGGTGCTGGGGATTGAACTTAGGATCTCTGCAACTTCTGGTGGAAGCCTaGGCTCAACTCTTGAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: DGYEPPCGCWGLNLGSLQLLVEA*AQLLNP Trigger: GGGATTCAAGAGTTGAGCCAAGGCTTCCACCAGAAG...TTGCAGAGATCCTAAGTTCAATCCCCAGCACCCACATGGCGGCTCATAACCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR CAA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCAGCCTTGGCTCAACTCTaGAATCCCAGTGCATGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPALAQL*NPSACP Trigger: TGGGCATGCACTGGGATTCAAGAGTTGAGCCAAGGC...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS TCA 90 bp | TATAGCAATCCTCTCAGCTTCTGGTGGAAGCCTTGGCTCAACTCTTaGATCCCAGTGCATGCCCAGGGATTTTCTGGGAGCTATGCTATG | + |
|
Preference number: 5 (lower is better) Translates to: YSNPLSFWWKPWLNS*IPVHAQGFSGSYAM Trigger: CATAGCATAGCTCCCAGAAAATCCCTGGGCATGCACTGGGATTCAAGAGTTGAGCCAAGGCTTCCACCAGAAGCTGAGAGGATTGCTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR CAA 90 bp | GCATGTATGCCTGCAGGCCAGAAGAGGGTCCCAGATCACATTATAGATGGTTATGGCGGAACTGGATCCTaGCACTCAGACTTGAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: ACMPAGQKRVPDHIIDGYGGTGS*HSDLKV Trigger: TACCTTCAAGTCTGAGTGCAAGGATCCAGTTCCGCC...ATAACCATCTATAATGTGATCTGGGACCCTCTTCTGGCCTGCAGGCATACATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR CAA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCAGGCGGAACTGGATCCTaGCACTCAGACTTGAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPGGTGS*HSDLKV Trigger: TACCTTCAAGTCTGAGTGCAAGGATCCAGTTCCGCC...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR CAA 90 bp | CCGCCATGTGGGTGCTGGGGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGCATTTTATAGATCTGTaGTTGGGCTCCGTTCATAAC | + |
|
Preference number: 5 (lower is better) Translates to: PPCGCWGLNLGSLQEQPVHFIDL*LGSVHN Trigger: GTTATGAACGGAGCCCAACAACAGATCTATAAAATG...CACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCCCCAGCACCCACATGGCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR CAA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCACTTCTGGTGGAAGCCTaGGCTCAACTCTTGAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPLLVEA*AQLLNP Trigger: GGGATTCAAGAGTTGAGCCAAGGCTTCCACCAGAAG...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR CAA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCATCTCCCTTCAAAGACTaGAGCTCCTCCCACAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPSPFKD*SSSHRR Trigger: TCTTCTGTGGGAGGAGCTCAAGTCTTTGAAGGGAGA...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR CAA 90 bp | TACAGTGTTCTGCCTGCATGTATGCCTGCAGGCCAGAAGAGGGTCCCAGATCACTCCTTGCACTCAGACTaGAAGGTAAAATTTCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: YSVLPACMPAGQKRVPDHSLHSD*KVKFQA Trigger: AGCTTGAAATTTTACCTTCAAGTCTGAGTGCAAGGA...GTGATCTGGGACCCTCTTCTGGCCTGCAGGCATACATGCAGGCAGAACACTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR CAA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCATTGAAGGAGGTCCAGTaGCTTTCCAGTAGTACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPLKEVQ*LSSSTS Trigger: GCTAGTACTACTGGAAAGCAACTGGACCTCCTTCAA...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS TCA 90 bp | AGAATAATAGCAAGGACTGAAAAGGGATGGATCTTTTCAACCTGCTaGATGGCCACTGAAGCGATCCTATCCAGCAGCAGAGTGTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RIIARTEKGWIFSTC*MATEAILSSSRVLR Trigger: CCTCAACACTCTGCTGCTGGATAGGATCGCTTCAGTGGCCATTCAGCAGGTTGAAAAGATCCATCCCTTTTCAGTCCTTGCTATTATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR CAA 90 bp | GTATACAGTGTTCTGCCTGCATGTATGCCTGCAGGCCAGAAGAGGGTCCCAGATCTTGCAATGTTGACTTaGGAAGAATTTACAGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VYSVLPACMPAGQKRVPDLAMLT*EEFTVS Trigger: TGACACTGTAAATTCTTCCAAAGTCAACATTGCAAG...ATCTGGGACCCTCTTCTGGCCTGCAGGCATACATGCAGGCAGAACACTGTATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR CAA 90 bp | TTATTTATTATGTATACAGTGTTCTGCCTGCATGTATGCCTGCAGGCCAGAAGATCTCCCTTCAAAGACTaGAGCTCCTCCCACAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LFIMYTVFCLHVCLQARRSPFKD*SSSHRR Trigger: TCTTCTGTGGGAGGAGCTCAAGTCTTTGAAGGGAGA...TCTTCTGGCCTGCAGGCATACATGCAGGCAGAACACTGTATACATAATAAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS-3UTR CAA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCATCCTTGCACTCAGACTaGAAGGTAAAATTTCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPSLHSD*KVKFQA Trigger: AGCTTGAAATTTTACCTTCAAGTCTGAGTGCAAGGA...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR CAA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCACATTTTATAGATCTGTaGTTGGGCTCCGTTCATAAC | + |
|
Preference number: 5 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPHFIDL*LGSVHN Trigger: GTTATGAACGGAGCCCAACAACAGATCTATAAAATG...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS TCA 90 bp | TCACCAGTCGTTCCTGGAAACACGGTGATATTAATGAAGAAATGCTaGCCATTAAGACAGATAAGGCCCTTAAGTCCTGGATGGTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPVVPGNTVILMKKC*PLRQIRPLSPGWFP Trigger: TGGAAACCATCCAGGACTTAAGGGCCTTATCTGTCTTAATGGTCAGCATTTCTTCATTAATATCACCGTGTTTCCAGGAACGACTGGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS-3UTR CAA 90 bp | GGATTGAACTTAGGATCTCTGCAAGAGCAGCCAGTGTTCTTTTCCTCTGTGCCACTTGCAATGTTGACTTaGGAAGAATTTACAGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GLNLGSLQEQPVFFSSVPLAMLT*EEFTVS Trigger: TGACACTGTAAATTCTTCCAAAGTCAACATTGCAAG...TGGCACAGAGGAAAAGAACACTGGCTGCTCTTGCAGAGATCCTAAGTTCAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS TCA 90 bp | TCAATAAGGTCAAACACTTGTTCTTCGTTTGTACACTTCTGCATCTaGGTAATTAATGACTCACAACTGAAGGGGCGGAGCGGAAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: SIRSNTCSSFVHFCI*VINDSQLKGRSGNA Trigger: AGCATTTCCGCTCCGCCCCTTCAGTTGTGAGTCATTAATTACTCAGATGCAGAAGTGTACAAACGAAGAACAAGTGTTTGACCTTATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS TCA 90 bp | CCTCGAGCTGCTTCAACAAATTCAAAGCTGTGGAACTGTAGAAACTaGTACAGGTTAAGGATTTTACTGATGGACTCCAGATCAAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: PRAASTNSKLWNCRN*YRLRILLMDSRSRW Trigger: CCATCTTGATCTGGAGTCCATCAGTAAAATCCTTAACCTGTATCAGTTTCTACAGTTCCACAGCTTTGAATTTGTTGAAGCAGCTCGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS TCA 72 bp | CCTCTCAGCTTCTGGTGGAAGCCTTGGCTCAACTCTTaGATCCCAGTGCATGCCCAGGGATTTTCTGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PLSFWWKPWLNS*IPVHAQGFSGS Trigger: GCTCCCAGAAAATCCCTGGGCATGCACTGGGATTCAAGAGTTGAGCCAAGGCTTCCACCAGAAGCTGAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS GCA 72 bp | ACTGCTTCAATCCGGGAGACCGCTGTTTCACTGAGGTaGGGATGTGGAAGCATGGACAGAGCAGAGACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: TASIRETAVSLR*GCGSMDRAETR Trigger: TCTGGTCTCTGCTCTGTCCATGCTTCCACATCCGCACCTCAGTGAAACAGCGGTCTCCCGGATTGAAGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS CAA 72 bp | TCCTCTCAGCTTCTGGTGGAAGCCTTGGCTCAACTCTaGAATCCCAGTGCATGCCCAGGGATTTTCTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSQLLVEALAQL*NPSACPGIFWE Trigger: CTCCCAGAAAATCCCTGGGCATGCACTGGGATTCAAGAGTTGAGCCAAGGCTTCCACCAGAAGCTGAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS GCA 72 bp | TCTGGTGGAAGCCTTGGCTCAACTCTTGAATCCCAGTaGATGCCCAGGGATTTTCTGGGAGCTATGCTATGG | + |
|
Preference number: 6 (lower is better) Translates to: SGGSLGSTLESQ*MPRDFLGAMLW Trigger: CCATAGCATAGCTCCCAGAAAATCCCTGGGCATGCACTGGGATTCAAGAGTTGAGCCAAGGCTTCCACCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS CCA 72 bp | AATCCGGGAGACCGCTGTTTCACTGAGGTGCGGATGTaGAAGCATGGACAGAGCAGAGACCAGAACAGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: NPGDRCFTEVRM*KHGQSRDQNRN Trigger: ATTTCTGTTCTGGTCTCTGCTCTGTCCATGCTTCCACATCCGCACCTCAGTGAAACAGCGGTCTCCCGGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS GCA 72 bp | GTGGAAGCCTTGGCTCAACTCTTGAATCCCAGTGCATaGCCAGGGATTTTCTGGGAGCTATGCTATGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: VEALAQLLNPSA*PGIFWELCYGF Trigger: AAAGCCATAGCATAGCTCCCAGAAAATCCCTGGGCATGCACTGGGATTCAAGAGTTGAGCCAAGGCTTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS CCA 72 bp | CAACTCTTGAATCCCAGTGCATGCCCAGGGATTTTCTaGGAGCTATGCTATGGCTTTCATAAGGCAGAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: QLLNPSACPGIF*ELCYGFHKAEV Trigger: AACCTCTGCCTTATGAAAGCCATAGCATAGCTCCCAGAAAATCCCTGGGCATGCACTGGGATTCAAGAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS TCA 72 bp | CAAAATGCATTCAAAACCCACTGTGTGGTAATACGGTaGAAGAGCGGAAGGCTTCACACATTGGTGTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: QNAFKTHCVVIR*KSGRLHTLVSS Trigger: GGAGGACACCAATGTGTGAAGCCTTCCGCTCTTTCACCGTATTACCACACAGTGGGTTTTGAATGCATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS TCA 72 bp | AGTAAAGCAGCGATGGATTCTTCAACTAAGGATTCGTaGAGCCATTCTCCCTTCAAAGACTTGAGCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SKAAMDSSTKDS*SHSPFKDLSSS Trigger: GGAGGAGCTCAAGTCTTTGAAGGGAGAATGGCTTCACGAATCCTTAGTTGAAGAATCCATCGCTGCTTTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS CCA 72 bp | AAGCAGACTGCTCTATTTAACTCCATGAGGCGGAACTaGATCCTTGCACTCAGACTTGAAGGTAAAATTTCA | + |
|
Preference number: 6 (lower is better) Translates to: KQTALFNSMRRN*ILALRLEGKIS Trigger: TGAAATTTTACCTTCAAGTCTGAGTGCAAGGATCCAGTTCCGCCTCATGGAGTTAAATAGAGCAGTCTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS TCA 72 bp | GTTCCTGGAAACACGGTGATATTAATGAAGAAATGCTaGCCATTAAGACAGATAAGGCCCTTAAGTCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: VPGNTVILMKKC*PLRQIRPLSPG Trigger: TCCAGGACTTAAGGGCCTTATCTGTCTTAATGGTCAGCATTTCTTCATTAATATCACCGTGTTTCCAGGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS CAA 72 bp | GAGCGTTGCCGTATTCGTCTCAATAAGGTCAAACACTaGTTCTTCGTTTGTACACTTCTGCATCTGAGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: ERCRIRLNKVKH*FFVCTLLHLSN Trigger: ATTACTCAGATGCAGAAGTGTACAAACGAAGAACAAGTGTTTGACCTTATTGAGACGAATACGGCAACGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS TCA 72 bp | CGACCTTGGCAATATTGCTGTAATCTATTTCATCCATaGAACGCAGTAAAGCAGCGATGGATTCTTCAACTA | + |
|
Preference number: 6 (lower is better) Translates to: RPWQYCCNLFHP*NAVKQRWILQL Trigger: TAGTTGAAGAATCCATCGCTGCTTTACTGCGTTTCATGGATGAAATAGATTACAGCAATATTGCCAAGGTCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073152.13 |
||
| CDS CCA 72 bp | TTGGACACACGCTCCAAAGAATTCATCCTTTTGAGGTaGATCATAGTTCAGAATGCTGAATGGGAGAATAAT | + |
|
Preference number: 6 (lower is better) Translates to: LDTRSKEFILLR*IIVQNAEWENN Trigger: ATTATTCTCCCATTCAGCATTCTGAACTATGATCCACCTCAAAAGGATGAATTCTTTGGAGCGTGTGTCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS CCA 72 bp | ATCCTTGCACTCAGACTTGAAGGTAAAATTTCAAGCTaGGAATCTAATCTGGCAAGGAACTCGATGTTAAAC | + |
|
Preference number: 6 (lower is better) Translates to: ILALRLEGKISS*ESNLARNSMLN Trigger: GTTTAACATCGAGTTCCTTGCCAGATTAGATTCCCAGCTTGAAATTTTACCTTCAAGTCTGAGTGCAAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073152.13 ENSMUST00000102706.4 |
||
| CDS TCA 72 bp | GGATCTTGGCAATATTGCTGTAATCTATTTCATCCATaGAACGCAGTAAAGCAGCGATGGATTCTTCAACTA | + |
|
Preference number: 6 (lower is better) Translates to: GSWQYCCNLFHP*NAVKQRWILQL Trigger: TAGTTGAAGAATCCATCGCTGCTTTACTGCGTTTCATGGATGAAATAGATTACAGCAATATTGCCAAGATCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102706.4 |
||