Pregenerated sensors for FASL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000817Ensembl transcript IDs: ENSMUST00000000834.4, ENSMUST00000193648.2
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCATACATACAAACACACAGACATCATTGCACTGGAGGTATGCATaGTATGTAGAGAATGATTTGTGCCTCAAACATCCCTCTTACTTC | + |
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Preference number: 1 (lower is better) Translates to: LIHTNTQTSLHWRYA*YVENDLCLKHPSYF Trigger: GAAGTAAGAGGGATGTTTGAGGCACAAATCATTCTCTACATAGCATGCATACCTCCAGTGCAATGATGTCTGTGTGTTTGTATGTATGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| 3UTR-3UTR GCA 90 bp | AGTCAAATGAGCCTCCTTTCTCACCCTTGTATATTCATACCACAACTATGTCTCACAGTTCTTTCTCTGTaGCTCTGCATTGTCACACAG | + |
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Preference number: 2 (lower is better) Translates to: SQMSLLSHPCIFIPQLCLTVLSL*LCIVTQ Trigger: CTGTGTGACAATGCAGAGGCACAGAGAAAGAACTGT...GAGACATAGTTGTGGTATGAATATACAAGGGTGAGAAAGGAGGCTCATTTGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| 3UTR-3UTR CCA 90 bp | CATACATACAAACACACAGACATCATTGCACTGGAGGTATGCATGCTATGTAGATGGTTAAAATTCTCTTaGCCATTTAACATCAGACAG | + |
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Preference number: 2 (lower is better) Translates to: HTYKHTDIIALEVCMLCRWLKFS*PFNIRQ Trigger: CTGTCTGATGTTAAATGGCCAAGAGAATTTTAACCA...TCTACATAGCATGCATACCTCCAGTGCAATGATGTCTGTGTGTTTGTATGTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| 3UTR-3UTR CAA 90 bp | GTAGTAAGTAGACCCACCCTGGAAGTGAGTGTAAAGGTGTCTTCTTCAATGGTTCTCTGTGCCTCTGCATaGTCACACAGCAGCCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: VVSRPTLEVSVKVSSSMVLCASA*SHSSPK Trigger: CTTTGGGCTGCTGTGTGACAATGCAGAGGCACAGAG...AACCATTGAAGAAGACACCTTTACACTCACTTCCAGGGTGGGTCTACTTACTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| 3UTR-3UTR CAA 90 bp | ATGATTTGTGCCTCAAACATCCCTCTTACTTCTCCGTTAGGATCAAAGGTCGGCCCTCCTTTCTCACCCTaGTATATTCATACCACAACT | + |
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Preference number: 3 (lower is better) Translates to: MICASNIPLTSPLGSKVGPPFSP*YIHTTT Trigger: AGTTGTGGTATGAATATACAAGGGTGAGAAAGGAGG...GCCGACCTTTGATCCTAACGGAGAAGTAAGAGGGATGTTTGAGGCACAAATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| 3UTR GCA 72 bp | CACTGGAGGTATGCATGCTATGTAGAGAATGATTTGTaGCTCAAACATCCCTCTTACTTCTCCGTTAGGATC | + |
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Preference number: 3 (lower is better) Translates to: HWRYACYVENDL*LKHPSYFSVRI Trigger: GATCCTAACGGAGAAGTAAGAGGGATGTTTGAGGCACAAATCATTCTCTACATAGCATGCATACCTCCAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| 3UTR TCA 72 bp | ATCATTGCACTGGAGGTATGCATGCTATGTAGAGAATaGTTTGTGCCTCAAACATCCCTCTTACTTCTCCGT | + |
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Preference number: 3 (lower is better) Translates to: IIALEVCMLCRE*FVPQTSLLLLR Trigger: ACGGAGAAGTAAGAGGGATGTTTGAGGCACAAATCATTCTCTACATAGCATGCATACCTCCAGTGCAATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| 3UTR GCA 72 bp | ACAAACACACAGACATCATTGCACTGGAGGTATGCATaGTATGTAGAGAATGATTTGTGCCTCAAACATCCC | + |
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Preference number: 3 (lower is better) Translates to: TNTQTSLHWRYA*YVENDLCLKHP Trigger: GGGATGTTTGAGGCACAAATCATTCTCTACATAGCATGCATACCTCCAGTGCAATGATGTCTGTGTGTTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS-3UTR CCA 90 bp | GTTGGACCTTGCGGTCATGAGGTCTTTGTGGCTCATGTAGTCTTAATTAATCTCGGTGGCGGTCTCCTTTaGTCCGGCCCTCTAGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: VGPCGHEVFVAHVVLINLGGGLL*SGPLGP Trigger: TGGGCCTAGAGGGCCGGACCAAAGGAGACCGCCACC...GAGATTAATTAAGACTACATGAGCCACAAAGACCTCATGACCGCAAGGTCCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS-3UTR TCA 90 bp | TGTGCCTCAAACATCCCTCTTACTTCTCCGTTAGGATCAAAGGTCGGCTCAGAAGAGCCACCAGAACCATaGAAAATACCACCGGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: CASNIPLTSPLGSKVGSEEPPEP*KIPPVA Trigger: GGCTACCGGTGGTATTTTTCATGGTTCTGGTGGCTC...TTCTGAGCCGACCTTTGATCCTAACGGAGAAGTAAGAGGGATGTTTGAGGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS-3UTR GCA 90 bp | CCTTGCGGTCATGAGGTCTTTGTGGCTCATGTAGTCTTAATTAATCTCAATAGGCTGCCCCCAGGTAGCTaGTGTGGGCCCATATCTGTC | + |
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Preference number: 4 (lower is better) Translates to: PCGHEVFVAHVVLINLNRLPPGS*CGPISV Trigger: GACAGATATGGGCCCACAGCAGCTACCTGGGGGCAG...CCTATTGAGATTAATTAAGACTACATGAGCCACAAAGACCTCATGACCGCAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000834.4 ENSMUST00000193648.2 |
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| CDS-3UTR CCA 90 bp | TCCTTTCTCACCCTTGTATATTCATACCACAACTATGTCTCAAAAACGGCCTCTAGGTGGTGGTGGAGGTaGCGGTCTCCTTTGGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: SFLTLVYSYHNYVSKTASRWWWR*RSPLVR Trigger: CCGGACCAAAGGAGACCGCCACCTCCACCACCACCT...AGAGGCCGTTTTTGAGACATAGTTGTGGTATGAATATACAAGGGTGAGAAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS-3UTR CCA 90 bp | GTTGGACCTTGCGGTCATGAGGTCTTTGTGGCTCATGTAGTCTTAATTAATCTCCCCATTCCAGAGGGATaGACCTTGAGTGGGGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: VGPCGHEVFVAHVVLINLPIPEG*TLSGGS Trigger: GGAACCCCCACTCAAGGTCCATCCCTCTGGAATGGG...GAGATTAATTAAGACTACATGAGCCACAAAGACCTCATGACCGCAAGGTCCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS-3UTR TCA 90 bp | CTCACCCTTGTATATTCATACCACAACTATGTCTCAAAAACGGCCTCTGTGAGGTGGACAGGGAAAAACTaGCCCTGGAGGAGCCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: LTLVYSYHNYVSKTASVRWTGKN*PWRSPR Trigger: TCTTGGGCTCCTCCAGGGTCAGTTTTTCCCTGTCCA...CCTCACAGAGGCCGTTTTTGAGACATAGTTGTGGTATGAATATACAAGGGTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS-3UTR GCA 90 bp | GCTCAGAAAACATTAGGTAACAGTAAAGATGGTGCCAATGAGACACTGTCTTTTCTGCCCCCAGGTAGCTaGTGTGGGCCCATATCTGTC | + |
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Preference number: 4 (lower is better) Translates to: AQKTLGNSKDGANETLSFLPPGS*CGPISV Trigger: GACAGATATGGGCCCACAGCAGCTACCTGGGGGCAG...AAAAGACAGTGTCTCATTGGCACCATCTTTACTGTTACCTAATGTTTTCTGAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS-3UTR CCA 90 bp | TTTAACATCAGACAGTTCTTTCTCTGTGCCTCTGCATTGTCACACAGCAGCCCAGAAGATCTGGGGACATaGGTAATTCATGGGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: FNIRQFFLCASALSHSSPEDLGT*VIHGLL Trigger: CAGCAGCCCATGAATTACCCATGTCCCCAGATCTTC...TGGGCTGCTGTGTGACAATGCAGAGGCACAGAGAAAGAACTGTCTGATGTTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS-3UTR TCA 90 bp | CTCACCCTTGTATATTCATACCACAACTATGTCTCAAAAACGGCCTCTGTGAGGACAACCCAGTTTCGTTaGTCACAAGGCCACCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: LTLVYSYHNYVSKTASVRTTQFR*SQGHLS Trigger: AGAAAGGTGGCCTTGTGATCAACGAAACTGGGTTGT...CCTCACAGAGGCCGTTTTTGAGACATAGTTGTGGTATGAATATACAAGGGTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS-3UTR GCA 90 bp | AGTCAAATGAGCCTCCTTTCTCACCCTTGTATATTCATACCACAACTATGTCTCGAACTCACGGAGTTCTaGCAGTTCCTTCTGCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: SQMSLLSHPCIFIPQLCLELTEF*QFLLQV Trigger: CACCTGCAGAAGGAACTGGCAGAACTCCGTGAGTTC...GAGACATAGTTGTGGTATGAATATACAAGGGTGAGAAAGGAGGCTCATTTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS-3UTR GCA 90 bp | ATACATACAAACACACAGACATCATTGCACTGGAGGTATGCATGCTATGTAGAGTTAGGGGCTGGTTGTTaGAAGACTGACCCCGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: IHTNTQTSLHWRYACYVELGAGC*KTDPGS Trigger: ACTTCCGGGGTCAGTCTTGCAACAACCAGCCCCTAA...CTCTACATAGCATGCATACCTCCAGTGCAATGATGTCTGTGTGTTTGTATGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| 3UTR CAA 72 bp | TTTAACATCAGACAGTTCTTTCTCTGTGCCTCTGCATaGTCACACAGCAGCCCAAAGCTTTATGTCCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: FNIRQFFLCASA*SHSSPKLYVPQ Trigger: CTGAGGGACATAAAGCTTTGGGCTGCTGTGTGACAATGCAGAGGCACAGAGAAAGAACTGTCTGATGTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS-3UTR TCA 90 bp | ATAGGTCTTAAGAAGACTCTCATTCAAGACAATATTCCTGGTGCCCATGATAAATGGAGGAGCCCAAGATaGAGTGGCACTGCTGTCTAC | + |
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Preference number: 4 (lower is better) Translates to: IGLKKTLIQDNIPGAHDKWRSPR*SGTAVY Trigger: GTAGACAGCAGTGCCACTTCATCTTGGGCTCCTCCA...TTTATCATGGGCACCAGGAATATTGTCTTGAATGAGAGTCTTCTTAAGACCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| 3UTR CAA 72 bp | TTGCACTGGAGGTATGCATGCTATGTAGAGAATGATTaGTGCCTCAAACATCCCTCTTACTTCTCCGTTAGG | + |
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Preference number: 4 (lower is better) Translates to: LHWRYACYVEND*CLKHPSYFSVR Trigger: CCTAACGGAGAAGTAAGAGGGATGTTTGAGGCACAAATCATTCTCTACATAGCATGCATACCTCCAGTGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS-3UTR CCA 90 bp | ATAGGTCTTAAGAAGACTCTCATTCAAGACAATATTCCTGGTGCCCATGATAAAGAGCCCAAGATGAAGTaGCACTGCTGTCTACCCAGA | + |
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Preference number: 4 (lower is better) Translates to: IGLKKTLIQDNIPGAHDKEPKMK*HCCLPR Trigger: TCTGGGTAGACAGCAGTGCCACTTCATCTTGGGCTC...TTTATCATGGGCACCAGGAATATTGTCTTGAATGAGAGTCTTCTTAAGACCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS-3UTR CCA 90 bp | TCTTGGCCATTTAACATCAGACAGTTCTTTCTCTGTGCCTCTGCATTGTCACACGATACTTTAAGGCTTTaGTTGGTGAACTCACGGAGT | + |
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Preference number: 4 (lower is better) Translates to: SWPFNIRQFFLCASALSHDTLRL*LVNSRS Trigger: ACTCCGTGAGTTCACCAACCAAAGCCTTAAAGTATC...GTGTGACAATGCAGAGGCACAGAGAAAGAACTGTCTGATGTTAAATGGCCAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS-3UTR TCA 90 bp | ATAGGTCTTAAGAAGACTCTCATTCAAGACAATATTCCTGGTGCCCATGATAAATGGTTGTTGCAAGACTaGCCCCGGAAGTATACTTTG | + |
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Preference number: 4 (lower is better) Translates to: IGLKKTLIQDNIPGAHDKWLLQD*PRKYTL Trigger: CAAAGTATACTTCCGGGGTCAGTCTTGCAACAACCA...TTTATCATGGGCACCAGGAATATTGTCTTGAATGAGAGTCTTCTTAAGACCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS-3UTR TCA 90 bp | TCTTGGCCATTTAACATCAGACAGTTCTTTCTCTGTGCCTCTGCATTGTCACACAGAGTTGAGATATGTTaGCATATAAATGGTCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: SWPFNIRQFFLCASALSHRVEIC*HINGQH Trigger: GTGCTGACCATTTATATGTCAACATATCTCAACTCT...GTGTGACAATGCAGAGGCACAGAGAAAGAACTGTCTGATGTTAAATGGCCAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS-3UTR TCA 90 bp | GTTGGACCTTGCGGTCATGAGGTCTTTGTGGCTCATGTAGTCTTAATTAATCTCAGAGTTGAGATATGTTaGCATATAAATGGTCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: VGPCGHEVFVAHVVLINLRVEIC*HINGQH Trigger: GTGCTGACCATTTATATGTCAACATATCTCAACTCT...GAGATTAATTAAGACTACATGAGCCACAAAGACCTCATGACCGCAAGGTCCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000834.4 ENSMUST00000193648.2 |
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| CDS-3UTR CCA 90 bp | GCTCAGAAAACATTAGGTAACAGTAAAGATGGTGCCAATGAGACACTGTCTTTTTTTCAGAGGGTGTACTaGGGTTGGCTATTTGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: AQKTLGNSKDGANETLSFFQRVY*GWLFAF Trigger: AAAAGCAAATAGCCAACCCCAGTACACCCTCTGAAA...AAAAGACAGTGTCTCATTGGCACCATCTTTACTGTTACCTAATGTTTTCTGAGC 40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| 3UTR CAA 72 bp | CTAGCTTATCAGTCAAATGAGCCTCCTTTCTCACCCTaGTATATTCATACCACAACTATGTCTCAAAAACGG | + |
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Preference number: 4 (lower is better) Translates to: LAYQSNEPPFSP*YIHTTTMSQKR Trigger: CCGTTTTTGAGACATAGTTGTGGTATGAATATACAAGGGTGAGAAAGGAGGCTCATTTGACTGATAAGCTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS-3UTR CCA 90 bp | ATAGGTCTTAAGAAGACTCTCATTCAAGACAATATTCCTGGTGCCCATGATAAACCCGGAAGTATACTTTaGAATACACGAAGTACAACC | + |
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Preference number: 4 (lower is better) Translates to: IGLKKTLIQDNIPGAHDKPGSIL*NTRSTT Trigger: GGTTGTACTTCGTGTATTCCAAAGTATACTTCCGGG...TTTATCATGGGCACCAGGAATATTGTCTTGAATGAGAGTCTTCTTAAGACCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS-3UTR CCA 90 bp | CCTTGCGGTCATGAGGTCTTTGTGGCTCATGTAGTCTTAATTAATCTCAATAGGATGTTGACATATAAATaGTCAGCACTGGTAAGATTG | + |
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Preference number: 4 (lower is better) Translates to: PCGHEVFVAHVVLINLNRMLTYK*SALVRL Trigger: CAATCTTACCAGTGCTGACCATTTATATGTCAACAT...CCTATTGAGATTAATTAAGACTACATGAGCCACAAAGACCTCATGACCGCAAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000834.4 ENSMUST00000193648.2 |
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| CDS-3UTR CCA 90 bp | AGTCAAATGAGCCTCCTTTCTCACCCTTGTATATTCATACCACAACTATGTCTCATGTTGACATATAAATaGTCAGCACTGGTAAGATTG | + |
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Preference number: 4 (lower is better) Translates to: SQMSLLSHPCIFIPQLCLMLTYK*SALVRL Trigger: CAATCTTACCAGTGCTGACCATTTATATGTCAACAT...GAGACATAGTTGTGGTATGAATATACAAGGGTGAGAAAGGAGGCTCATTTGACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS CCA 90 bp | CAGAGATCAGAGCGGTTCCATATGTGTCTTCCCATTCCAGAGGGATaGACCTTGAGTGGGGGTTCCCTGTTAAATGGGCCACACTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: QRSERFHMCLPIPEG*TLSGGSLLNGPHSS Trigger: CGAGGAGTGTGGCCCATTTAACAGGGAACCCCCACTCAAGGTCCATCCCTCTGGAATGGGAAGACACATATGGAACCGCTCTGATCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS-3UTR CAA 90 bp | CATACATACAAACACACAGACATCATTGCACTGGAGGTATGCATGCTATGTAGAAGGTGGCGGTCTCCTTaGGTCCGGCCCTCTAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: HTYKHTDIIALEVCMLCRRWRSP*VRPSRP Trigger: GGGCCTAGAGGGCCGGACCAAAGGAGACCGCCACCT...TCTACATAGCATGCATACCTCCAGTGCAATGATGTCTGTGTGTTTGTATGTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS TCA 90 bp | GTGAACTCACGGAGTTCTGCCAGTTCCTTCTGCAGGTGGAAGAGCTaGTACATTCCTAATCCCATTCCAACCAGAGCCACCAGAACCATG | + |
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Preference number: 5 (lower is better) Translates to: VNSRSSASSFCRWKS*YIPNPIPTRATRTM Trigger: CATGGTTCTGGTGGCTCTGGTTGGAATGGGATTAGGAATGTATCAGCTCTTCCACCTGCAGAAGGAACTGGCAGAACTCCGTGAGTTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS-3UTR CAA 90 bp | CAAAGCTTTATGTCCCTCAGTCACAGACCTCCTTCCATCTGGCTCATGATGCAGCCGGTAGCCACAGATTaGTGTTGTGGTCCTTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: QSFMSLSHRPPSIWLMMQPVATD*CCGPSS Trigger: AGAAGAAGGACCACAACACAAATCTGTGGCTACCGG...CTGCATCATGAGCCAGATGGAAGGAGGTCTGTGACTGAGGGACATAAAGCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS-3UTR CAA 90 bp | TCTTGGCCATTTAACATCAGACAGTTCTTTCTCTGTGCCTCTGCATTGTCACACCCAGAGGGATGGACCTaGAGTGGGGGTTCCCTGTTA | + |
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Preference number: 5 (lower is better) Translates to: SWPFNIRQFFLCASALSHPEGWT*SGGSLL Trigger: TAACAGGGAACCCCCACTCAAGGTCCATCCCTCTGG...GTGTGACAATGCAGAGGCACAGAGAAAGAACTGTCTGATGTTAAATGGCCAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS-3UTR CAA 90 bp | AAGCTTTATGTCCCTCAGTCACAGACCTCCTTCCATCTGGCTCATGATGCAGGCAGCCACAGATTTGTGTaGTGGTCCTTCTTCTTTAGA | + |
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Preference number: 5 (lower is better) Translates to: KLYVPQSQTSFHLAHDAGSHRFV*WSFFFR Trigger: TCTAAAGAAGAAGGACCACAACACAAATCTGTGGCT...GCCTGCATCATGAGCCAGATGGAAGGAGGTCTGTGACTGAGGGACATAAAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS TCA 90 bp | GCTGATACATTCCTAATCCCATTCCAACCAGAGCCACCAGAACCATaGAAAATACCACCGGTAGCCACAGATTTGTGTTGTGGTCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: ADTFLIPFQPEPPEP*KIPPVATDLCCGPS Trigger: AGAAGGACCACAACACAAATCTGTGGCTACCGGTGGTATTTTTCATGGTTCTGGTGGCTCTGGTTGGAATGGGATTAGGAATGTATCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS-3UTR CAA 90 bp | GTTGGACCTTGCGGTCATGAGGTCTTTGTGGCTCATGTAGTCTTAATTAATCTCTACAACCCAGTTTCGTaGATCACAAGGCCACCTTTC | + |
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Preference number: 5 (lower is better) Translates to: VGPCGHEVFVAHVVLINLYNPVS*ITRPPF Trigger: GAAAGGTGGCCTTGTGATCAACGAAACTGGGTTGTA...GAGATTAATTAAGACTACATGAGCCACAAAGACCTCATGACCGCAAGGTCCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS-3UTR CAA 90 bp | ATGATTTGTGCCTCAAACATCCCTCTTACTTCTCCGTTAGGATCAAAGGTCGGCCCCCGGAAGTATACTTaGGAATACACGAAGTACAAC | + |
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Preference number: 5 (lower is better) Translates to: MICASNIPLTSPLGSKVGPRKYT*EYTKYN Trigger: GTTGTACTTCGTGTATTCCAAAGTATACTTCCGGGG...GCCGACCTTTGATCCTAACGGAGAAGTAAGAGGGATGTTTGAGGCACAAATCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS TCA 90 bp | CCCGGAAGTATACTTTGGAATACACGAAGTACAACCCAGTTTCGTTaGTCACAAGGCCACCTTTCTTATACTTCACTCCAGAGATCAGAG | + |
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Preference number: 5 (lower is better) Translates to: PGSILWNTRSTTQFR*SQGHLSYTSLQRSE Trigger: CTCTGATCTCTGGAGTGAAGTATAAGAAAGGTGGCCTTGTGATCAACGAAACTGGGTTGTACTTCGTGTATTCCAAAGTATACTTCCGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS-3UTR CAA 90 bp | TCCTTTCTCACCCTTGTATATTCATACCACAACTATGTCTCAAAAACGGCCTCTGAGGGTGTACTGGGGTaGGCTATTTGCTTTTCAAAA | + |
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Preference number: 5 (lower is better) Translates to: SFLTLVYSYHNYVSKTASEGVLG*AICFSK Trigger: TTTTGAAAAGCAAATAGCCAACCCCAGTACACCCTC...AGAGGCCGTTTTTGAGACATAGTTGTGGTATGAATATACAAGGGTGAGAAAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS CCA 72 bp | GGTGACACAGGTGGTGGTGGAGGTGGCGGTCTCCTTTaGTCCGGCCCTCTAGGCCCACAAGATGGACAGGGA | + |
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Preference number: 6 (lower is better) Translates to: GDTGGGGGGGLL*SGPLGPQDGQG Trigger: TCCCTGTCCATCTTGTGGGCCTAGAGGGCCGGACCAAAGGAGACCGCCACCTCCACCACCACCTGTGTCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS CAA 72 bp | TTCCATATGTGTCTTCCCATTCCAGAGGGATGGACCTaGAGTGGGGGTTCCCTGTTAAATGGGCCACACTCC | + |
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Preference number: 6 (lower is better) Translates to: FHMCLPIPEGWT*SGGSLLNGPHS Trigger: GGAGTGTGGCCCATTTAACAGGGAACCCCCACTCAAGGTCCATCCCTCTGGAATGGGAAGACACATATGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS CAA 90 bp | GCCACCAGAACCATGAAAAATACCACCGGTAGCCACAGATTTGTGTaGTGGTCCTTCTTCTTTAGAGGGGTCAGTGGCGGCAGTGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: ATRTMKNTTGSHRFV*WSFFFRGVSGGSGS Trigger: ACTCCCACTGCCGCCACTGACCCCTCTAAAGAAGAAGGACCACAACACAAATCTGTGGCTACCGGTGGTATTTTTCATGGTTCTGGTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS CAA 72 bp | ACCATGAAAAATACCACCGGTAGCCACAGATTTGTGTaGTGGTCCTTCTTCTTTAGAGGGGTCAGTGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: TMKNTTGSHRFV*WSFFFRGVSGG Trigger: GCCGCCACTGACCCCTCTAAAGAAGAAGGACCACAACACAAATCTGTGGCTACCGGTGGTATTTTTCATGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS TCA 72 bp | TTCCTAATCCCATTCCAACCAGAGCCACCAGAACCATaGAAAATACCACCGGTAGCCACAGATTTGTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: FLIPFQPEPPEP*KIPPVATDLCC Trigger: ACAACACAAATCTGTGGCTACCGGTGGTATTTTTCATGGTTCTGGTGGCTCTGGTTGGAATGGGATTAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS GCA 72 bp | TCCTCATATAGACCTTGTGGTTTAGGGGCTGGTTGTTaGAAGACTGACCCCGGAAGTATACTTTGGAATACA | + |
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Preference number: 6 (lower is better) Translates to: SSYRPCGLGAGC*KTDPGSILWNT Trigger: TGTATTCCAAAGTATACTTCCGGGGTCAGTCTTGCAACAACCAGCCCCTAAACCACAAGGTCTATATGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS CAA 90 bp | CCCCGGAAGTATACTTTGGAATACACGAAGTACAACCCAGTTTCGTaGATCACAAGGCCACCTTTCTTATACTTCACTCCAGAGATCAGA | + |
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Preference number: 6 (lower is better) Translates to: PRKYTLEYTKYNPVS*ITRPPFLYFTPEIR Trigger: TCTGATCTCTGGAGTGAAGTATAAGAAAGGTGGCCTTGTGATCAACGAAACTGGGTTGTACTTCGTGTATTCCAAAGTATACTTCCGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS TCA 72 bp | ATACTTTGGAATACACGAAGTACAACCCAGTTTCGTTaGTCACAAGGCCACCTTTCTTATACTTCACTCCAG | + |
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Preference number: 6 (lower is better) Translates to: ILWNTRSTTQFR*SQGHLSYTSLQ Trigger: CTGGAGTGAAGTATAAGAAAGGTGGCCTTGTGATCAACGAAACTGGGTTGTACTTCGTGTATTCCAAAGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS CCA 72 bp | GCTATTTGCTTTTCAAAAGATGATACTTTAAGGCTTTaGTTGGTGAACTCACGGAGTTCTGCCAGTTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: AICFSKDDTLRL*LVNSRSSASSF Trigger: GAAGGAACTGGCAGAACTCCGTGAGTTCACCAACCAAAGCCTTAAAGTATCATCTTTTGAAAAGCAAATAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS CAA 72 bp | ATTTGCTTTTCAAAAGATGATACTTTAAGGCTTTGGTaGGTGAACTCACGGAGTTCTGCCAGTTCCTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: ICFSKDDTLRLW*VNSRSSASSFC Trigger: GCAGAAGGAACTGGCAGAACTCCGTGAGTTCACCAACCAAAGCCTTAAAGTATCATCTTTTGAAAAGCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS CAA 72 bp | TATACTTTGGAATACACGAAGTACAACCCAGTTTCGTaGATCACAAGGCCACCTTTCTTATACTTCACTCCA | + |
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Preference number: 6 (lower is better) Translates to: YTLEYTKYNPVS*ITRPPFLYFTP Trigger: TGGAGTGAAGTATAAGAAAGGTGGCCTTGTGATCAACGAAACTGGGTTGTACTTCGTGTATTCCAAAGTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000834.4 |
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| CDS TCA 72 bp | AAGGTCTTAGATTCCTCAAAATTGATCAGAGAGAGTTaGGATATGTTGACATATAAATGGTCAGCACTGGTA | + |
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Preference number: 6 (lower is better) Translates to: KVLDSSKLIRES*DMLTYKWSALV Trigger: TACCAGTGCTGACCATTTATATGTCAACATATCTCAACTCTCTCTGATCAATTTTGAGGAATCTAAGACCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000834.4 ENSMUST00000193648.2 |
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