Pregenerated sensors for FAS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024778Ensembl transcript IDs: ENSMUST00000025691.13, ENSMUST00000112472.4, ENSMUST00000235232.2, ENSMUST00000235709.2
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATTTCTGGGACTTTGTTTCCTGCAGTTTGTATTGCTGGTTGCTGTaGACGGCTCAAGGGTTCCATGTTCACACGAGGCGCAGCGAACAC | + |
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Preference number: 1 (lower is better) Translates to: DFWDFVSCSLYCWLL*TAQGFHVHTRRSEH Trigger: GTGTTCGCTGCGCCTCGTGTGAACATGGAACCCTTGAGCCGTGCACAGCAACCAGCAATACAAACTGCAGGAAACAAAGTCCCAGAAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR CCA 90 bp | GCAGCGAACACAGTGTTCACAGCCAGGAGAATCGCAGTAGAAGTCTaGTTTGCACTTGCACTTGGTATTCTGGGTCAGGGTGCAGTTTGT | + |
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Preference number: 1 (lower is better) Translates to: AANTVFTARRIAVEV*FALALGILGQGAVC Trigger: ACAAACTGCACCCTGACCCAGAATACCAAGTGCAAGTGCAAACCAGACTTCTACTGCGATTCTCCTGGCTGTGAACACTGTGTTCGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR CCA 90 bp | TGGTACCAGCACAGGAGCAGCTGGACTTTCTGCTCAGCTGTGTCTTaGATGCTGTCATGCATGATCTCATCTATCTTGCCCTCCTTGATG | + |
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Preference number: 1 (lower is better) Translates to: WYQHRSSWTFCSAVS*MLSCMISSILPSLM Trigger: CATCAAGGAGGGCAAGATAGATGAGATCATGCATGACAGCATCCAAGACACAGCTGAGCAGAAAGTCCAGCTGCTCCTGTGCTGGTACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR GCA 90 bp | GAACACAGTGTTCACAGCCAGGAGAATCGCAGTAGAAGTCTGGTTTaGACTTGCACTTGGTATTCTGGGTCAGGGTGCAGTTTGTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: EHSVHSQENRSRSLV*TCTWYSGSGCSLFP Trigger: TGGAAACAAACTGCACCCTGACCCAGAATACCAAGTGCAAGTGCAAACCAGACTTCTACTGCGATTCTCCTGGCTGTGAACACTGTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR GCA 90 bp | CAAGGATGGTCAACAACCATAGGCGATTTCTGGGACTTTGTTTCCTaGAGTTTGTATTGCTGGTTGCTGTGCACGGCTCAAGGGTTCCAT | + |
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Preference number: 1 (lower is better) Translates to: QGWSTTIGDFWDFVS*SLYCWLLCTAQGFH Trigger: ATGGAACCCTTGAGCCGTGCACAGCAACCAGCAATACAAACTGCAGGAAACAAAGTCCCAGAAATCGCCTATGGTTGTTGACCATCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR CCA 90 bp | CACAGCCAGGAGAATCGCAGTAGAAGTCTGGTTTGCACTTGCACTTaGTATTCTGGGTCAGGGTGCAGTTTGTTTCCACCTCTAAACCAT | + |
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Preference number: 1 (lower is better) Translates to: HSQENRSRSLVCTCT*YSGSGCSLFPPLNH Trigger: ATGGTTTAGAGGTGGAAACAAACTGCACCCTGACCCAGAATACCAAGTGCAAGTGCAAACCAGACTTCTACTGCGATTCTCCTGGCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR GCA 90 bp | AGTAGAAGTCTGGTTTGCACTTGCACTTGGTATTCTGGGTCAGGGTaGAGTTTGTTTCCACCTCTAAACCATGCTCTTCATCGCAGAGTG | + |
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Preference number: 1 (lower is better) Translates to: SRSLVCTCTWYSGSG*SLFPPLNHALHRRV Trigger: CACTCTGCGATGAAGAGCATGGTTTAGAGGTGGAAACAAACTGCACCCTGACCCAGAATACCAAGTGCAAGTGCAAACCAGACTTCTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR CCA 90 bp | TGCTGGCAAAGAGAACACACCAGGAGTTGCCAATGTCAATACAGTTaGCATTCATTTTGTTTCCATCATGGGTGGCAGGCTCTCTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: CWQREHTRSCQCQYS*HSFCFHHGWQALSS Trigger: AGAGGAGAGAGCCTGCCACCCATGATGGAAACAAAATGAATGCCAACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCCAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 ENSMUST00000235709.2 |
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| 3UTR CCA 90 bp | GTGGAATTAACAAAACAAGGATGGTCAACAACCATAGGCGATTTCTaGGACTTTGTTTCCTGCAGTTTGTATTGCTGGTTGCTGTGCACG | + |
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Preference number: 1 (lower is better) Translates to: VELTKQGWSTTIGDF*DFVSCSLYCWLLCT Trigger: CGTGCACAGCAACCAGCAATACAAACTGCAGGAAACAAAGTCCCAGAAATCGCCTATGGTTGTTGACCATCCTTGTTTTGTTAATTCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR GCA 90 bp | TTTCCACCTCTAAACCATGCTCTTCATCGCAGAGTGTGCATCTTCTaGATTTATCAGCATAATGGTTCTTGTCCATGTACTCCTTCCCTT | + |
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Preference number: 1 (lower is better) Translates to: FPPLNHALHRRVCIF*IYQHNGSCPCTPSL Trigger: AAGGGAAGGAGTACATGGACAAGAACCATTATGCTGATAAATGCAGAAGATGCACACTCTGCGATGAAGAGCATGGTTTAGAGGTGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR GCA 90 bp | TGCAGTTTGTTTCCACCTCTAAACCATGCTCTTCATCGCAGAGTGTaGATCTTCTGCATTTATCAGCATAATGGTTCTTGTCCATGTACT | + |
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Preference number: 1 (lower is better) Translates to: CSLFPPLNHALHRRV*IFCIYQHNGSCPCT Trigger: AGTACATGGACAAGAACCATTATGCTGATAAATGCAGAAGATGCACACTCTGCGATGAAGAGCATGGTTTAGAGGTGGAAACAAACTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR CCA 90 bp | ATTTCATGGACATTTGAATGTAAAAATTGCAGTAGACAGAGAAAATaGTTCATCTCAGCAACTGCAGAGAATAACAGAAGCAGTCCCTGG | + |
|
Preference number: 1 (lower is better) Translates to: ISWTFECKNCSRQRK*FISATAENNRSSPW Trigger: CCAGGGACTGCTTCTGTTATTCTCTGCAGTTGCTGAGATGAACCATTTTCTCTGTCTACTGCAATTTTTACATTCAAATGTCCATGAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 ENSMUST00000235709.2 |
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| 3UTR CAA 90 bp | TTGGTACCAGCACAGGAGCAGCTGGACTTTCTGCTCAGCTGTGTCTaGGATGCTGTCATGCATGATCTCATCTATCTTGCCCTCCTTGAT | + |
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Preference number: 2 (lower is better) Translates to: LVPAQEQLDFLLSCV*DAVMHDLIYLALLD Trigger: ATCAAGGAGGGCAAGATAGATGAGATCATGCATGACAGCATCCAAGACACAGCTGAGCAGAAAGTCCAGCTGCTCCTGTGCTGGTACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTTTCCATCATGGGTGGCAGGCTCTCTCCTCTCTTCATGGCTGGAACTGAGGTCAACTACCATTTGCTaGCAAAGAGAACACACCAGG | + |
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Preference number: 2 (lower is better) Translates to: LFPSWVAGSLLSSWLELRSTTIC*QREHTR Trigger: CCTGGTGTGTTCTCTTTGCCAGCAAATGGTAGTTGA...CCTCAGTTCCAGCCATGAAGAGAGGAGAGAGCCTGCCACCCATGATGGAAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 ENSMUST00000235709.2 |
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| 3UTR CAA 90 bp | AGTCTGGTTTGCACTTGCACTTGGTATTCTGGGTCAGGGTGCAGTTaGTTTCCACCTCTAAACCATGCTCTTCATCGCAGAGTGTGCATC | + |
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Preference number: 2 (lower is better) Translates to: SLVCTCTWYSGSGCS*FPPLNHALHRRVCI Trigger: GATGCACACTCTGCGATGAAGAGCATGGTTTAGAGGTGGAAACAAACTGCACCCTGACCCAGAATACCAAGTGCAAGTGCAAACCAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR CAA 90 bp | AACAACCATAGGCGATTTCTGGGACTTTGTTTCCTGCAGTTTGTATaGCTGGTTGCTGTGCACGGCTCAAGGGTTCCATGTTCACACGAG | + |
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Preference number: 2 (lower is better) Translates to: NNHRRFLGLCFLQFV*LVAVHGSRVPCSHE Trigger: CTCGTGTGAACATGGAACCCTTGAGCCGTGCACAGCAACCAGCAATACAAACTGCAGGAAACAAAGTCCCAGAAATCGCCTATGGTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR CAA 90 bp | TGGTCAACAACCATAGGCGATTTCTGGGACTTTGTTTCCTGCAGTTaGTATTGCTGGTTGCTGTGCACGGCTCAAGGGTTCCATGTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: WSTTIGDFWDFVSCS*YCWLLCTAQGFHVH Trigger: GTGAACATGGAACCCTTGAGCCGTGCACAGCAACCAGCAATACAAACTGCAGGAAACAAAGTCCCAGAAATCGCCTATGGTTGTTGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR-3UTR GCA 90 bp | TTGTTTCCATCATGGGTGGCAGGCTCTCTCCTCTCTTCATGGCTGGAACTGAGGGTATCAACTACCATTTaGTGGCAAAGAGAACACACC | + |
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Preference number: 2 (lower is better) Translates to: LFPSWVAGSLLSSWLELRVSTTI*WQREHT Trigger: GGTGTGTTCTCTTTGCCAGCAAATGGTAGTTGATAC...CCTCAGTTCCAGCCATGAAGAGAGGAGAGAGCCTGCCACCCATGATGGAAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 ENSMUST00000235709.2 |
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| 3UTR CAA 90 bp | TTGCTGGCAAAGAGAACACACCAGGAGTTGCCAATGTCAATACAGTaGGCATTCATTTTGTTTCCATCATGGGTGGCAGGCTCTCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: LLAKRTHQELPMSIQ*AFILFPSWVAGSLL Trigger: GAGGAGAGAGCCTGCCACCCATGATGGAAACAAAATGAATGCCAACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCCAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 ENSMUST00000235709.2 |
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| 3UTR-3UTR GCA 90 bp | GGGACTTTGTTTCCTGCAGTTTGTATTGCTGGTTGCTGTGCACGGCTCAAGGGTGTATCAACTACCATTTaGTGGCAAAGAGAACACACC | + |
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Preference number: 2 (lower is better) Translates to: GTLFPAVCIAGCCARLKGVSTTI*WQREHT Trigger: GGTGTGTTCTCTTTGCCAGCAAATGGTAGTTGATAC...ACCCTTGAGCCGTGCACAGCAACCAGCAATACAAACTGCAGGAAACAAAGTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGAGGTAGTTTTCACTCCAGACATTGTCCTTCATTTTCATTTCCAGTGTCTGACTCCTTCCCTTCTGTaGATGGGGCGCAGGTTGGTG | + |
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Preference number: 2 (lower is better) Translates to: TEVVFTPDIVLHFHFQCLTPSLL*MGRRLV Trigger: CACCAACCTGCGCCCCATGCACAGAAGGGAAGGAGT...CAGACACTGGAAATGAAAATGAAGGACAATGTCTGGAGTGAAAACTACCTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGGCAAAGAGAACACACCAGGAGTTGCCAATGTCAATACAGTTGGCATTCATTCCACCTCTAAACCATaGTCTTCATCGCAGAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: AGKENTPGVANVNTVGIHSTSKP*SSSQSV Trigger: CACACTCTGCGATGAAGAGCATGGTTTAGAGGTGGA...ATGAATGCCAACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR-3UTR TCA 90 bp | TTCATTAAAGTTGCATCCACCCAAATCACCCCCTGCAATTTCCGTTTGGCTTCTAACGGGCTGAATTTCTaGTGGTCTCCAAAATGCTCA | + |
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Preference number: 2 (lower is better) Translates to: FIKVASTQITPCNFRLASNGLNF*WSPKCS Trigger: TGAGCATTTTGGAGACCATCAGAAATTCAGCCCGTT...AGAAGCCAAACGGAAATTGCAGGGGGTGATTTGGGTGGATGCAACTTTAATGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112472.4 |
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| 3UTR-3UTR GCA 90 bp | CTACCATTTGCTGGCAAAGAGAACACACCAGGAGTTGCCAATGTCAATACAGTTGAACACACCAGGAGTTaGCAATGTCAATACAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: LPFAGKENTPGVANVNTVEHTRS*QCQYSW Trigger: CCAACTGTATTGACATTGGCAACTCCTGGTGTGTTC...AACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCCAGCAAATGGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 ENSMUST00000235709.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGGCAAAGAGAACACACCAGGAGTTGCCAATGTCAATACAGTTGGCATTCATAGTAGAAGTCTGGTTTaGACTTGCACTTGGTATTCT | + |
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Preference number: 2 (lower is better) Translates to: AGKENTPGVANVNTVGIHSRSLV*TCTWYS Trigger: AGAATACCAAGTGCAAGTGCAAACCAGACTTCTACT...ATGAATGCCAACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR CAA 90 bp | CTGAGTATCAACTACCATTTGCTGGCAAAGAGAACACACCAGGAGTaGCCAATGTCAATACAGTTGGCATTCATTTTGTTTCCATCATGG | + |
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Preference number: 2 (lower is better) Translates to: LSINYHLLAKRTHQE*PMSIQLAFILFPSW Trigger: CCATGATGGAAACAAAATGAATGCCAACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCCAGCAAATGGTAGTTGATACTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 ENSMUST00000235709.2 |
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| 3UTR-3UTR CCA 90 bp | CTACCATTTGCTGGCAAAGAGAACACACCAGGAGTTGCCAATGTCAATACAGTTAGTAGACAGAGAAAATaGTTCATCTCAGCAACTGCA | + |
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Preference number: 2 (lower is better) Translates to: LPFAGKENTPGVANVNTVSRQRK*FISATA Trigger: TGCAGTTGCTGAGATGAACCATTTTCTCTGTCTACT...AACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCCAGCAAATGGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 ENSMUST00000235709.2 |
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| 3UTR-3UTR GCA 90 bp | CTACCATTTGCTGGCAAAGAGAACACACCAGGAGTTGCCAATGTCAATACAGTTAGAGTGTGCATCTTCTaGATTTATCAGCATAATGGT | + |
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Preference number: 2 (lower is better) Translates to: LPFAGKENTPGVANVNTVRVCIF*IYQHNG Trigger: ACCATTATGCTGATAAATGCAGAAGATGCACACTCT...AACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCCAGCAAATGGTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR-3UTR CCA 90 bp | GTAAGCATACAGTGTATTTTAATCAATCAAAAGCACCAGTTCACAGATGGAATCCCTGCAATTTCCGTTTaGCTTCTTTACCCACCCCAC | + |
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Preference number: 2 (lower is better) Translates to: VSIQCILINQKHQFTDGIPAISV*LLYPPH Trigger: GTGGGGTGGGTAAAGAAGCCAAACGGAAATTGCAGG...GATTCCATCTGTGAACTGGTGCTTTTGATTGATTAAAATACACTGTATGCTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112472.4 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGTCTTCAATTAACTGCGAGTATTTGTTTCAGTTTATAATTCTCCTCAGTTCAACTACCATTTGCTaGCAAAGAGAACACACCAGG | + |
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Preference number: 2 (lower is better) Translates to: GRSSINCEYLFQFIILLSSTTIC*QREHTR Trigger: CCTGGTGTGTTCTCTTTGCCAGCAAATGGTAGTTGA...ACTGAGGAGAATTATAAACTGAAACAAATACTCGCAGTTAATTGAAGACCTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 ENSMUST00000235709.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGTCTTCAATTAACTGCGAGTATTTGTTTCAGTTTATAATTCTCCTCAGTAGTAGACAGAGAAAATaGTTCATCTCAGCAACTGCA | + |
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Preference number: 2 (lower is better) Translates to: GRSSINCEYLFQFIILLSSRQRK*FISATA Trigger: TGCAGTTGCTGAGATGAACCATTTTCTCTGTCTACT...ACTGAGGAGAATTATAAACTGAAACAAATACTCGCAGTTAATTGAAGACCTTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 ENSMUST00000235709.2 |
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| 3UTR GCA 72 bp | GACTTTGTTTCCTGCAGTTTGTATTGCTGGTTGCTGTaGACGGCTCAAGGGTTCCATGTTCACACGAGGCGC | + |
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Preference number: 3 (lower is better) Translates to: DFVSCSLYCWLL*TAQGFHVHTRR Trigger: GCGCCTCGTGTGAACATGGAACCCTTGAGCCGTGCACAGCAACCAGCAATACAAACTGCAGGAAACAAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR-3UTR CAA 90 bp | TTGTTTCCATCATGGGTGGCAGGCTCTCTCCTCTCTTCATGGCTGGAACTGAGGTTTGTTTCCTGCAGTTaGTATTGCTGGTTGCTGTGC | + |
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Preference number: 3 (lower is better) Translates to: LFPSWVAGSLLSSWLELRFVSCS*YCWLLC Trigger: GCACAGCAACCAGCAATACAAACTGCAGGAAACAAA...CCTCAGTTCCAGCCATGAAGAGAGGAGAGAGCCTGCCACCCATGATGGAAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR-3UTR CAA 90 bp | TGCATCCACCCAAATCACCCCCTGCAATTTCCGTTTGGCTTCTTTACCCACCCCTTGATGAAAAGAAAGTaGAATCACTCCAACGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: CIHPNHPLQFPFGFFTHPLMKRK*NHSNGL Trigger: CAGCCCGTTGGAGTGATTCAACTTTCTTTTCATCAA...GGGGTGGGTAAAGAAGCCAAACGGAAATTGCAGGGGGTGATTTGGGTGGATGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112472.4 |
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| 3UTR GCA 72 bp | AGCCAGGAGAATCGCAGTAGAAGTCTGGTTTGCACTTaGACTTGGTATTCTGGGTCAGGGTGCAGTTTGTTT | + |
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Preference number: 3 (lower is better) Translates to: SQENRSRSLVCT*TWYSGSGCSLF Trigger: AAACAAACTGCACCCTGACCCAGAATACCAAGTGCAAGTGCAAACCAGACTTCTACTGCGATTCTCCTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR CCA 72 bp | GAGAATCGCAGTAGAAGTCTGGTTTGCACTTGCACTTaGTATTCTGGGTCAGGGTGCAGTTTGTTTCCACCT | + |
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Preference number: 3 (lower is better) Translates to: ENRSRSLVCTCT*YSGSGCSLFPP Trigger: AGGTGGAAACAAACTGCACCCTGACCCAGAATACCAAGTGCAAGTGCAAACCAGACTTCTACTGCGATTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR CCA 72 bp | GATTTCTGGGACTTTGTTTCCTGCAGTTTGTATTGCTaGTTGCTGTGCACGGCTCAAGGGTTCCATGTTCAC | + |
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Preference number: 3 (lower is better) Translates to: DFWDFVSCSLYC*LLCTAQGFHVH Trigger: GTGAACATGGAACCCTTGAGCCGTGCACAGCAACCAGCAATACAAACTGCAGGAAACAAAGTCCCAGAAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR GCA 72 bp | TCAACAACCATAGGCGATTTCTGGGACTTTGTTTCCTaGAGTTTGTATTGCTGGTTGCTGTGCACGGCTCAA | + |
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Preference number: 3 (lower is better) Translates to: STTIGDFWDFVS*SLYCWLLCTAQ Trigger: TTGAGCCGTGCACAGCAACCAGCAATACAAACTGCAGGAAACAAAGTCCCAGAAATCGCCTATGGTTGTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR TCA 72 bp | AATAACAGAAGCAGTCCCTGGAACCTGCTAGTCATTTaGCCCTCACTGAGTATCAACTACCATTTGCTGGCA | + |
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Preference number: 3 (lower is better) Translates to: NNRSSPWNLLVI*PSLSINYHLLA Trigger: TGCCAGCAAATGGTAGTTGATACTCAGTGAGGGTCAAATGACTAGCAGGTTCCAGGGACTGCTTCTGTTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 ENSMUST00000235709.2 |
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| 3UTR-3UTR CAA 90 bp | CTACCATTTGCTGGCAAAGAGAACACACCAGGAGTTGCCAATGTCAATACAGTTCAGTTGGCATTCATTTaGTTTCCATCATGGGTGGCA | + |
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Preference number: 3 (lower is better) Translates to: LPFAGKENTPGVANVNTVQLAFI*FPSWVA Trigger: TGCCACCCATGATGGAAACAAAATGAATGCCAACTG...AACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCCAGCAAATGGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 ENSMUST00000235709.2 |
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| 3UTR-3UTR CAA 90 bp | GACAGAGAAAATGGTTCATCTCAGCAACTGCAGAGAATAACAGAAGCAGTCCCTAGTATCAACTACCATTaGCTGGCAAAGAGAACACAC | + |
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Preference number: 3 (lower is better) Translates to: DRENGSSQQLQRITEAVPSINYH*LAKRTH Trigger: GTGTGTTCTCTTTGCCAGCAAATGGTAGTTGATACT...AGGGACTGCTTCTGTTATTCTCTGCAGTTGCTGAGATGAACCATTTTCTCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 ENSMUST00000235709.2 |
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| 3UTR CCA 72 bp | ACAAAACAAGGATGGTCAACAACCATAGGCGATTTCTaGGACTTTGTTTCCTGCAGTTTGTATTGCTGGTTG | + |
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Preference number: 3 (lower is better) Translates to: TKQGWSTTIGDF*DFVSCSLYCWL Trigger: CAACCAGCAATACAAACTGCAGGAAACAAAGTCCCAGAAATCGCCTATGGTTGTTGACCATCCTTGTTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR-3UTR CAA 90 bp | GGGTCATCCTGTCTCCTTTTCCAGCACTTTCTTTTCCGGTACTTTCGATATATAGCGATTTCTGGGACTTaGTTTCCTGCAGTTTGTATT | + |
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Preference number: 3 (lower is better) Translates to: GSSCLLFQHFLFRYFRYIAISGT*FPAVCI Trigger: AATACAAACTGCAGGAAACAAAGTCCCAGAAATCGC...TATATATCGAAAGTACCGGAAAAGAAAGTGCTGGAAAAGGAGACAGGATGACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| 3UTR GCA 72 bp | ACTACCATTTGCTGGCAAAGAGAACACACCAGGAGTTaGCAATGTCAATACAGTTGGCATTCATTTTGTTTC | + |
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Preference number: 3 (lower is better) Translates to: TTICWQREHTRS*QCQYSWHSFCF Trigger: GAAACAAAATGAATGCCAACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCCAGCAAATGGTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 ENSMUST00000235709.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGGAAAAGAACTGTCCATCAATGGAAGGTCTTCAATTAACTGCGAGTATTTGAGTATCAACTACCATTaGCTGGCAAAGAGAACACAC | + |
|
Preference number: 3 (lower is better) Translates to: RGKELSINGRSSINCEYLSINYH*LAKRTH Trigger: GTGTGTTCTCTTTGCCAGCAAATGGTAGTTGATACT...CAAATACTCGCAGTTAATTGAAGACCTTCCATTGATGGACAGTTCTTTTCCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 ENSMUST00000235709.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGGTCTTCAATTAACTGCGAGTATTTGTTTCAGTTTATAATTCTCCTCAGTCAGTTGGCATTCATTTaGTTTCCATCATGGGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GRSSINCEYLFQFIILLSQLAFI*FPSWVA Trigger: TGCCACCCATGATGGAAACAAAATGAATGCCAACTG...ACTGAGGAGAATTATAAACTGAAACAAATACTCGCAGTTAATTGAAGACCTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 ENSMUST00000235709.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGCATACAGTGTATTTTAATCAATCAAAAGCACCAGTTCACAGATGGAATCACGTCTCTTCATTAAAGTaGCATCCACCCAAATCACCC | + |
|
Preference number: 3 (lower is better) Translates to: KHTVYFNQSKAPVHRWNHVSSLK*HPPKSP Trigger: GGGTGATTTGGGTGGATGCAACTTTAATGAAGAGAC...GTGATTCCATCTGTGAACTGGTGCTTTTGATTGATTAAAATACACTGTATGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112472.4 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGGTCTTCAATTAACTGCGAGTATTTGTTTCAGTTTATAATTCTCCTCAGTAGTATCAACTACCATTaGCTGGCAAAGAGAACACAC | + |
|
Preference number: 3 (lower is better) Translates to: GRSSINCEYLFQFIILLSSINYH*LAKRTH Trigger: GTGTGTTCTCTTTGCCAGCAAATGGTAGTTGATACT...ACTGAGGAGAATTATAAACTGAAACAAATACTCGCAGTTAATTGAAGACCTTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 ENSMUST00000235709.2 |
||
| CDS-3UTR GCA 90 bp | TTGTTTCCATCATGGGTGGCAGGCTCTCTCCTCTCTTCATGGCTGGAACTGAGGGTTTGTATTGCTGGTTaGTGTGCACGGCTCAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFPSWVAGSLLSSWLELRVCIAG*CARLKG Trigger: ACCCTTGAGCCGTGCACAGCAACCAGCAATACAAAC...CCTCAGTTCCAGCCATGAAGAGAGGAGAGAGCCTGCCACCCATGATGGAAACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
||
| CDS-3UTR CCA 90 bp | TCCATCATGGGTGGCAGGCTCTCTCCTCTCTTCATGGCTGGAACTGAGGTAGTTGTTTGCACTTGCACTTaGTATTCTGGGTCAGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SIMGGRLSPLFMAGTEVVVCTCT*YSGSGC Trigger: GCACCCTGACCCAGAATACCAAGTGCAAGTGCAAAC...AACTACCTCAGTTCCAGCCATGAAGAGAGGAGAGAGCCTGCCACCCATGATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
||
| CDS-3UTR GCA 90 bp | TTGACCCTCACTGAGTATCAACTACCATTTGCTGGCAAAGAGAACACACCAGGAACTCCTTCCCTTCTGTaGATGGGGCGCAGGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LTLTEYQLPFAGKENTPGTPSLL*MGRRLV Trigger: CACCAACCTGCGCCCCATGCACAGAAGGGAAGGAGT...TCCTGGTGTGTTCTCTTTGCCAGCAAATGGTAGTTGATACTCAGTGAGGGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGCAAAGAGAACACACCAGGAGTTGCCAATGTCAATACAGTTGGCATTCATACTCCTTCCCTTCTGTaGATGGGGCGCAGGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGKENTPGVANVNTVGIHTPSLL*MGRRLV Trigger: CACCAACCTGCGCCCCATGCACAGAAGGGAAGGAGT...ATGAATGCCAACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAGCAGTCCCTGGAACCTGCTAGTCATTTGACCCTCACTGAGTATCAACTACAGCACAGGAGCAGCTaGACTTTCTGCTCAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QKQSLEPASHLTLTEYQLQHRSS*TFCSAV Trigger: CACAGCTGAGCAGAAAGTCCAGCTGCTCCTGTGCTG...TAGTTGATACTCAGTGAGGGTCAAATGACTAGCAGGTTCCAGGGACTGCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTGGCATTCATTTTGTTTCCATCATGGGTGGCAGGCTCTCTCCTCTCTTCACAGCACAGGAGCAGCTaGACTTTCTGCTCAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QLAFILFPSWVAGSLLSSQHRSS*TFCSAV Trigger: CACAGCTGAGCAGAAAGTCCAGCTGCTCCTGTGCTG...TGAAGAGAGGAGAGAGCCTGCCACCCATGATGGAAACAAAATGAATGCCAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
||
| 3UTR CAA 72 bp | GCACAGGAGCAGCTGGACTTTCTGCTCAGCTGTGTCTaGGATGCTGTCATGCATGATCTCATCTATCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AQEQLDFLLSCV*DAVMHDLIYLA Trigger: GGCAAGATAGATGAGATCATGCATGACAGCATCCAAGACACAGCTGAGCAGAAAGTCCAGCTGCTCCTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
||
| CDS-3UTR GCA 90 bp | AGGCGATTTCTGGGACTTTGTTTCCTGCAGTTTGTATTGCTGGTTGCTGTGCACATGAGAGGGAGCCCATaGTTTACACTGCCTACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRFLGLCFLQFVLLVAVHMRGSP*FTLPTW Trigger: CCACGTAGGCAGTGTAAAGCATGGGCTCCCTCTCAT...GTGCACAGCAACCAGCAATACAAACTGCAGGAAACAAAGTCCCAGAAATCGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
||
| 3UTR CAA 72 bp | TTCTGGGACTTTGTTTCCTGCAGTTTGTATTGCTGGTaGCTGTGCACGGCTCAAGGGTTCCATGTTCACACG | + |
|
Preference number: 4 (lower is better) Translates to: FWDFVSCSLYCW*LCTAQGFHVHT Trigger: CGTGTGAACATGGAACCCTTGAGCCGTGCACAGCAACCAGCAATACAAACTGCAGGAAACAAAGTCCCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
||
| 3UTR CAA 72 bp | AGGCGATTTCTGGGACTTTGTTTCCTGCAGTTTGTATaGCTGGTTGCTGTGCACGGCTCAAGGGTTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: RRFLGLCFLQFV*LVAVHGSRVPC Trigger: ACATGGAACCCTTGAGCCGTGCACAGCAACCAGCAATACAAACTGCAGGAAACAAAGTCCCAGAAATCGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
||
| CDS-3UTR GCA 90 bp | GGGTCATCCTGTCTCCTTTTCCAGCACTTTCTTTTCCGGTACTTTCGATATATACCTGCCTGCAAGATGTaGTGGGGCAATGGTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: GSSCLLFQHFLFRYFRYIPACKM*WGNGGT Trigger: TGTGCCACCATTGCCCCAGCACATCTTGCAGGCAGG...TATATATCGAAAGTACCGGAAAAGAAAGTGCTGGAAAAGGAGACAGGATGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
||
| CDS-3UTR CCA 90 bp | ACTACCATTTGCTGGCAAAGAGAACACACCAGGAGTTGCCAATGTCAATACAGTGATGTGCTGGGGCAATaGTGGCACAGAACTTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TTICWQREHTRSCQCQYSDVLGQ*WHRTCG Trigger: CCCACAAGTTCTGTGCCACCATTGCCCCAGCACATC...ACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCCAGCAAATGGTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
||
| 3UTR CAA 72 bp | TGCACTTGCACTTGGTATTCTGGGTCAGGGTGCAGTTaGTTTCCACCTCTAAACCATGCTCTTCATCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CTCTWYSGSGCS*FPPLNHALHRR Trigger: TCTGCGATGAAGAGCATGGTTTAGAGGTGGAAACAAACTGCACCCTGACCCAGAATACCAAGTGCAAGTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGCAAAGAGAACACACCAGGAGTTGCCAATGTCAATACAGTTGGCATTCATTCCAGTGTCTGGGGTTaGTTTTCCAAGGTCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGKENTPGVANVNTVGIHSSVWG*FSKVLL Trigger: CAGAAGGACCTTGGAAAATCAACCCCAGACACTGGA...ATGAATGCCAACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
||
| CDS-3UTR GCA 90 bp | CCCTCACTGAGTATCAACTACCATTTGCTGGCAAAGAGAACACACCAGGAGTTGTCCACCTCTAAACCATaGTCTTCATCGCAGAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSLSINYHLLAKRTHQELSTSKP*SSSQSV Trigger: CACACTCTGCGATGAAGAGCATGGTTTAGAGGTGGA...CAACTCCTGGTGTGTTCTCTTTGCCAGCAAATGGTAGTTGATACTCAGTGAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
||
| CDS-3UTR GCA 90 bp | TTGTTTCCATCATGGGTGGCAGGCTCTCTCCTCTCTTCATGGCTGGAACTGAGGAGTAGAAGTCTGGTTTaGACTTGCACTTGGTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFPSWVAGSLLSSWLELRSRSLV*TCTWYS Trigger: AGAATACCAAGTGCAAGTGCAAACCAGACTTCTACT...CCTCAGTTCCAGCCATGAAGAGAGGAGAGAGCCTGCCACCCATGATGGAAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
||
| CDS-3UTR GCA 90 bp | TCCATCATGGGTGGCAGGCTCTCTCCTCTCTTCATGGCTGGAACTGAGGTAGTTAGTAGAAGTCTGGTTTaGACTTGCACTTGGTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SIMGGRLSPLFMAGTEVVSRSLV*TCTWYS Trigger: AGAATACCAAGTGCAAGTGCAAACCAGACTTCTACT...AACTACCTCAGTTCCAGCCATGAAGAGAGGAGAGAGCCTGCCACCCATGATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGCAAAGAGAACACACCAGGAGTTGCCAATGTCAATACAGTTGGCATTCATGTTTGTATTGCTGGTTaGTGTGCACGGCTCAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGKENTPGVANVNTVGIHVCIAG*CARLKG Trigger: ACCCTTGAGCCGTGCACAGCAACCAGCAATACAAAC...ATGAATGCCAACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
||
| CDS-3UTR TCA 90 bp | GAACCTGCTAGTCATTTGACCCTCACTGAGTATCAACTACCATTTGCTGGCAAATCCAGTGTCTGGGGTTaGTTTTCCAAGGTCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EPASHLTLTEYQLPFAGKSSVWG*FSKVLL Trigger: CAGAAGGACCTTGGAAAATCAACCCCAGACACTGGA...TTTGCCAGCAAATGGTAGTTGATACTCAGTGAGGGTCAAATGACTAGCAGGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
||
| CDS-3UTR TCA 90 bp | GGGTCATCCTGTCTCCTTTTCCAGCACTTTCTTTTCCGGTACTTTCGATATATAATCAGACTGGATAGCTaGGAGACCAGGTTGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GSSCLLFQHFLFRYFRYIIRLDS*ETRLAW Trigger: CCATGCCAACCTGGTCTCTCAGCTATCCAGTCTGAT...TATATATCGAAAGTACCGGAAAAGAAAGTGCTGGAAAAGGAGACAGGATGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
||
| CDS-3UTR CCA 90 bp | TTGACCCTCACTGAGTATCAACTACCATTTGCTGGCAAAGAGAACACACCAGGATGCTCAGCTGTGTCTTaGATGCTGTCATGCATGATC | + |
|
Preference number: 4 (lower is better) Translates to: LTLTEYQLPFAGKENTPGCSAVS*MLSCMI Trigger: GATCATGCATGACAGCATCCAAGACACAGCTGAGCA...TCCTGGTGTGTTCTCTTTGCCAGCAAATGGTAGTTGATACTCAGTGAGGGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
||
| CDS-3UTR CCA 90 bp | GGGTCATCCTGTCTCCTTTTCCAGCACTTTCTTTTCCGGTACTTTCGATATATAGGCCAGGAATCAGACTaGATAGCTGAGAGACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSSCLLFQHFLFRYFRYIGQESD*IAERPG Trigger: ACCTGGTCTCTCAGCTATCCAGTCTGATTCCTGGCC...TATATATCGAAAGTACCGGAAAAGAAAGTGCTGGAAAAGGAGACAGGATGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
||
| CDS-3UTR CCA 90 bp | GTGGAATTAACAAAACAAGGATGGTCAACAACCATAGGCGATTTCTGGGACTTTGTGGCACAGAACTTGTaGGAGTGGCCAGCCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: VELTKQGWSTTIGDFWDFVAQNL*EWPANV Trigger: GACATTGGCTGGCCACTCCCACAAGTTCTGTGCCAC...AAAGTCCCAGAAATCGCCTATGGTTGTTGACCATCCTTGTTTTGTTAATTCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
||
| CDS-3UTR CCA 90 bp | GTGGAATTAACAAAACAAGGATGGTCAACAACCATAGGCGATTTCTGGGACTTTGCCTGCAAGATGTGCTaGGGCAATGGTGGCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VELTKQGWSTTIGDFWDFACKMC*GNGGTE Trigger: TTCTGTGCCACCATTGCCCCAGCACATCTTGCAGGC...AAAGTCCCAGAAATCGCCTATGGTTGTTGACCATCCTTGTTTTGTTAATTCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
||
| CDS-3UTR TCA 90 bp | AGTTGGCATTCATTTTGTTTCCATCATGGGTGGCAGGCTCTCTCCTCTCTTCATCAAAATGGGCCTCCTTaGTATAATCCTTCTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SWHSFCFHHGWQALSSLHQNGPP*YNPSEQ Trigger: CTGCTCAGAAGGATTATATCAAGGAGGCCCATTTTG...ATGAAGAGAGGAGAGAGCCTGCCACCCATGATGGAAACAAAATGAATGCCAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 ENSMUST00000235709.2 |
||
| CDS-3UTR GCA 90 bp | TTGACCCTCACTGAGTATCAACTACCATTTGCTGGCAAAGAGAACACACCAGGAAGTCTGGTTTGCACTTaGACTTGGTATTCTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTLTEYQLPFAGKENTPGSLVCT*TWYSGS Trigger: TGACCCAGAATACCAAGTGCAAGTGCAAACCAGACT...TCCTGGTGTGTTCTCTTTGCCAGCAAATGGTAGTTGATACTCAGTGAGGGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGCAAAGAGAACACACCAGGAGTTGCCAATGTCAATACAGTTGGCATTCATTTGCACTTGGTATTCTaGGTCAGGGTGCAGTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AGKENTPGVANVNTVGIHLHLVF*VRVQFV Trigger: AACAAACTGCACCCTGACCCAGAATACCAAGTGCAA...ATGAATGCCAACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGCAAAGAGAACACACCAGGAGTTGCCAATGTCAATACAGTTGGCATTCATACCATAGGCGATTTCTaGGACTTTGTTTCCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AGKENTPGVANVNTVGIHTIGDF*DFVSCS Trigger: ACTGCAGGAAACAAAGTCCCAGAAATCGCCTATGGT...ATGAATGCCAACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025691.13 |
||
| CDS-3UTR CCA 90 bp | CTACCATTTGCTGGCAAAGAGAACACACCAGGAGTTGCCAATGTCAATACAGTTTGCTCAGCTGTGTCTTaGATGCTGTCATGCATGATC | + |
|
Preference number: 4 (lower is better) Translates to: LPFAGKENTPGVANVNTVCSAVS*MLSCMI Trigger: GATCATGCATGACAGCATCCAAGACACAGCTGAGCA...AACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCCAGCAAATGGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
||
| CDS-3UTR TCA 90 bp | CCCTCACTGAGTATCAACTACCATTTGCTGGCAAAGAGAACACACCAGGAGTTGCCCTTGATTAAATCTTaGTATGCATCACTCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSLSINYHLLAKRTHQELPLIKS*YASLFP Trigger: TGGGAAGAGTGATGCATATCAAGATTTAATCAAGGG...CAACTCCTGGTGTGTTCTCTTTGCCAGCAAATGGTAGTTGATACTCAGTGAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
||
| CDS-3UTR TCA 90 bp | CAGTTGGCATTCATTTTGTTTCCATCATGGGTGGCAGGCTCTCTCCTCTCTTCATTCTGGACCATGTCCTaGAATTTATCTAAGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QLAFILFPSWVAGSLLSSFWTMS*NLSKVL Trigger: CAGAACCTTAGATAAATTTCAGGACATGGTCCAGAA...TGAAGAGAGGAGAGAGCCTGCCACCCATGATGGAAACAAAATGAATGCCAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
||
| CDS-3UTR GCA 90 bp | ACTACCATTTGCTGGCAAAGAGAACACACCAGGAGTTGCCAATGTCAATACAGTAGTCTGGTTTGCACTTaGACTTGGTATTCTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TTICWQREHTRSCQCQYSSLVCT*TWYSGS Trigger: TGACCCAGAATACCAAGTGCAAGTGCAAACCAGACT...ACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCCAGCAAATGGTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
||
| CDS-3UTR GCA 90 bp | AGTTGGCATTCATTTTGTTTCCATCATGGGTGGCAGGCTCTCTCCTCTCTTCATTGGGACTTTGTTTCCTaGAGTTTGTATTGCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SWHSFCFHHGWQALSSLHWDFVS*SLYCWL Trigger: CAACCAGCAATACAAACTGCAGGAAACAAAGTCCCA...ATGAAGAGAGGAGAGAGCCTGCCACCCATGATGGAAACAAAATGAATGCCAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025691.13 |
||
| CDS-3UTR GCA 90 bp | CAGTTGGCATTCATTTTGTTTCCATCATGGGTGGCAGGCTCTCTCCTCTCTTCATCTTGGATGCTGTCATaGATGATCTCATCTATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QLAFILFPSWVAGSLLSSSWMLS*MISSIL Trigger: CAAGATAGATGAGATCATGCATGACAGCATCCAAGA...TGAAGAGAGGAGAGAGCCTGCCACCCATGATGGAAACAAAATGAATGCCAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
||
| CDS-3UTR TCA 90 bp | ACTACCATTTGCTGGCAAAGAGAACACACCAGGAGTTGCCAATGTCAATACAGTCTATCTTGCCCTCCTTaGTGTTATTTTCTCGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TTICWQREHTRSCQCQYSLSCPP*CYFLEQ Trigger: TTGCTCGAGAAAATAACATCAAGGAGGGCAAGATAG...ACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCCAGCAAATGGTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
||
| CDS-3UTR TCA 90 bp | TTGACCCTCACTGAGTATCAACTACCATTTGCTGGCAAAGAGAACACACCAGGATTCTGGACCATGTCCTaGAATTTATCTAAGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTLTEYQLPFAGKENTPGFWTMS*NLSKVL Trigger: CAGAACCTTAGATAAATTTCAGGACATGGTCCAGAA...TCCTGGTGTGTTCTCTTTGCCAGCAAATGGTAGTTGATACTCAGTGAGGGTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
||
| CDS-3UTR TCA 90 bp | CTACCATTTGCTGGCAAAGAGAACACACCAGGAGTTGCCAATGTCAATACAGTTCCCTTGATTAAATCTTaGTATGCATCACTCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPFAGKENTPGVANVNTVPLIKS*YASLFP Trigger: TGGGAAGAGTGATGCATATCAAGATTTAATCAAGGG...AACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCCAGCAAATGGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
||
| CDS-3UTR GCA 90 bp | TTGACCCTCACTGAGTATCAACTACCATTTGCTGGCAAAGAGAACACACCAGGAAGAGTGTGCATCTTCTaGATTTATCAGCATAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTLTEYQLPFAGKENTPGRVCIF*IYQHNG Trigger: ACCATTATGCTGATAAATGCAGAAGATGCACACTCT...TCCTGGTGTGTTCTCTTTGCCAGCAAATGGTAGTTGATACTCAGTGAGGGTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
||
| CDS-3UTR GCA 90 bp | AAAAATTGCAGTAGACAGAGAAAATGGTTCATCTCAGCAACTGCAGAGAATAACTCCTGCAGTTTGTATTaGTGGTTGCTGTGCACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KNCSRQRKWFISATAENNSCSLY*WLLCTA Trigger: AGCCGTGCACAGCAACCAGCAATACAAACTGCAGGA...GTTATTCTCTGCAGTTGCTGAGATGAACCATTTTCTCTGTCTACTGCAATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGAAAAGAACTGTCCATCAATGGAAGGTCTTCAATTAACTGCGAGTATTTGCAGAACTTGTGGGAGTaGCCAGCCAATGTCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RGKELSINGRSSINCEYLQNLWE*PANVLF Trigger: AAACAAGACATTGGCTGGCCACTCCCACAAGTTCTG...CAAATACTCGCAGTTAATTGAAGACCTTCCATTGATGGACAGTTCTTTTCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
||
| CDS-3UTR GCA 90 bp | GAACCTGCTAGTCATTTGACCCTCACTGAGTATCAACTACCATTTGCTGGCAAAAGAGTGTGCATCTTCTaGATTTATCAGCATAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: EPASHLTLTEYQLPFAGKRVCIF*IYQHNG Trigger: ACCATTATGCTGATAAATGCAGAAGATGCACACTCT...TTTGCCAGCAAATGGTAGTTGATACTCAGTGAGGGTCAAATGACTAGCAGGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
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| CDS-3UTR GCA 90 bp | GGAAGGTCTTCAATTAACTGCGAGTATTTGTTTCAGTTTATAATTCTCCTCAGTTCCTGCAGTTTGTATTaGTGGTTGCTGTGCACGGCT | + |
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Preference number: 4 (lower is better) Translates to: GRSSINCEYLFQFIILLSSCSLY*WLLCTA Trigger: AGCCGTGCACAGCAACCAGCAATACAAACTGCAGGA...ACTGAGGAGAATTATAAACTGAAACAAATACTCGCAGTTAATTGAAGACCTTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
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| CDS-3UTR CCA 90 bp | GGAAGGTCTTCAATTAACTGCGAGTATTTGTTTCAGTTTATAATTCTCCTCAGTGTTTGCACTTGCACTTaGTATTCTGGGTCAGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: GRSSINCEYLFQFIILLSVCTCT*YSGSGC Trigger: GCACCCTGACCCAGAATACCAAGTGCAAGTGCAAAC...ACTGAGGAGAATTATAAACTGAAACAAATACTCGCAGTTAATTGAAGACCTTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
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| CDS-3UTR TCA 90 bp | TCTCTTCTTTTTGATGAAAAGAAAGTTGAATCACTCCAACGGGCTGAATTTCTGCAAAATGGGCCTCCTTaGTATAATCCTTCTGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SLLFDEKKVESLQRAEFLQNGPP*YNPSEQ Trigger: CTGCTCAGAAGGATTATATCAAGGAGGCCCATTTTG...CAGAAATTCAGCCCGTTGGAGTGATTCAACTTTCTTTTCATCAAAAAGAAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112472.4 |
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| 3UTR CAA 72 bp | AACTACCATTTGCTGGCAAAGAGAACACACCAGGAGTaGCCAATGTCAATACAGTTGGCATTCATTTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: NYHLLAKRTHQE*PMSIQLAFILF Trigger: AAACAAAATGAATGCCAACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCCAGCAAATGGTAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 ENSMUST00000235709.2 |
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| 3UTR CAA 72 bp | GTGTCTTGGATGCTGTCATGCATGATCTCATCTATCTaGCCCTCCTTGATGTTATTTTCTCGAGCAAATTTT | + |
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Preference number: 4 (lower is better) Translates to: VSWMLSCMISSI*PSLMLFSRANF Trigger: AAAATTTGCTCGAGAAAATAACATCAAGGAGGGCAAGATAGATGAGATCATGCATGACAGCATCCAAGACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| CDS-3UTR TCA 90 bp | TTCTATTATACATTTCCACATAGAGAGGAAAAGAACTGTCCATCAATGGAAGGTCAAAATGGGCCTCCTTaGTATAATCCTTCTGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: FYYTFPHREEKNCPSMEGQNGPP*YNPSEQ Trigger: CTGCTCAGAAGGATTATATCAAGGAGGCCCATTTTG...ACCTTCCATTGATGGACAGTTCTTTTCCTCTCTATGTGGAAATGTATAATAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 ENSMUST00000235709.2 |
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| CDS-3UTR GCA 90 bp | AGAGGAAAAGAACTGTCCATCAATGGAAGGTCTTCAATTAACTGCGAGTATTTGTCTTGGATGCTGTCATaGATGATCTCATCTATCTTG | + |
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Preference number: 4 (lower is better) Translates to: RGKELSINGRSSINCEYLSWMLS*MISSIL Trigger: CAAGATAGATGAGATCATGCATGACAGCATCCAAGA...CAAATACTCGCAGTTAATTGAAGACCTTCCATTGATGGACAGTTCTTTTCCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
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| CDS-3UTR CCA 90 bp | GGAAGGTCTTCAATTAACTGCGAGTATTTGTTTCAGTTTATAATTCTCCTCAGTTTGCACTTGGTATTCTaGGTCAGGGTGCAGTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: GRSSINCEYLFQFIILLSLHLVF*VRVQFV Trigger: AACAAACTGCACCCTGACCCAGAATACCAAGTGCAA...ACTGAGGAGAATTATAAACTGAAACAAATACTCGCAGTTAATTGAAGACCTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
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| CDS-3UTR TCA 90 bp | GGAAGGTCTTCAATTAACTGCGAGTATTTGTTTCAGTTTATAATTCTCCTCAGTCTATCTTGCCCTCCTTaGTGTTATTTTCTCGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: GRSSINCEYLFQFIILLSLSCPP*CYFLEQ Trigger: TTGCTCGAGAAAATAACATCAAGGAGGGCAAGATAG...ACTGAGGAGAATTATAAACTGAAACAAATACTCGCAGTTAATTGAAGACCTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
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| CDS CCA 90 bp | ATCCTGCCTGCAAGATGTGCTGGGGCAATGGTGGCACAGAACTTGTaGGAGTGGCCAGCCAATGTCTTGTTTAACTTGAAGCTCACTCCA | + |
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Preference number: 5 (lower is better) Translates to: ILPARCAGAMVAQNL*EWPANVLFNLKLTP Trigger: TGGAGTGAGCTTCAAGTTAAACAAGACATTGGCTGGCCACTCCCACAAGTTCTGTGCCACCATTGCCCCAGCACATCTTGCAGGCAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| CDS CCA 90 bp | ATCAGCATAATGGTTCTTGTCCATGTACTCCTTCCCTTCTGTGCATaGGGCGCAGGTTGGTGTACCCCCATTCATTTTGCAGTCCTCAAC | + |
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Preference number: 5 (lower is better) Translates to: ISIMVLVHVLLPFCA*GAGWCTPIHFAVLN Trigger: GTTGAGGACTGCAAAATGAATGGGGGTACACCAACCTGCGCCCCATGCACAGAAGGGAAGGAGTACATGGACAAGAACCATTATGCTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
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| CDS-3UTR CAA 90 bp | ACCCTCACTGAGTATCAACTACCATTTGCTGGCAAAGAGAACACACCAGGAGTTACCAGGTTGGCATGGTaGACAGCAAAATGGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: TLTEYQLPFAGKENTPGVTRLAW*TAKWAS Trigger: GGAGGCCCATTTTGCTGTCAACCATGCCAACCTGGT...AACTCCTGGTGTGTTCTCTTTGCCAGCAAATGGTAGTTGATACTCAGTGAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 ENSMUST00000235709.2 |
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| CDS-3UTR CAA 90 bp | AGTTGGCATTCATTTTGTTTCCATCATGGGTGGCAGGCTCTCTCCTCTCTTCATTGCATGGGGCGCAGGTaGGTGTACCCCCATTCATTT | + |
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Preference number: 5 (lower is better) Translates to: SWHSFCFHHGWQALSSLHCMGRR*VYPHSF Trigger: AAATGAATGGGGGTACACCAACCTGCGCCCCATGCA...ATGAAGAGAGGAGAGAGCCTGCCACCCATGATGGAAACAAAATGAATGCCAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
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| CDS-3UTR CAA 90 bp | CAGAAGCAGTCCCTGGAACCTGCTAGTCATTTGACCCTCACTGAGTATCAACTAGGTTTGCACTTGCACTaGGTATTCTGGGTCAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: QKQSLEPASHLTLTEYQLGLHLH*VFWVRV Trigger: CACCCTGACCCAGAATACCAAGTGCAAGTGCAAACC...TAGTTGATACTCAGTGAGGGTCAAATGACTAGCAGGTTCCAGGGACTGCTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
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| CDS-3UTR CAA 90 bp | CAGTTGGCATTCATTTTGTTTCCATCATGGGTGGCAGGCTCTCTCCTCTCTTCAAGTTTGTATTGCTGGTaGCTGTGCACGGCTCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: QLAFILFPSWVAGSLLSSSLYCW*LCTAQG Trigger: CCCTTGAGCCGTGCACAGCAACCAGCAATACAAACT...TGAAGAGAGGAGAGAGCCTGCCACCCATGATGGAAACAAAATGAATGCCAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
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| CDS-3UTR CAA 90 bp | ACTACCATTTGCTGGCAAAGAGAACACACCAGGAGTTGCCAATGTCAATACAGTACCAGGTTGGCATGGTaGACAGCAAAATGGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: TTICWQREHTRSCQCQYSTRLAW*TAKWAS Trigger: GGAGGCCCATTTTGCTGTCAACCATGCCAACCTGGT...ACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCCAGCAAATGGTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 ENSMUST00000235709.2 |
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| CDS-3UTR CAA 90 bp | ACTACCATTTGCTGGCAAAGAGAACACACCAGGAGTTGCCAATGTCAATACAGTTGCATGGGGCGCAGGTaGGTGTACCCCCATTCATTT | + |
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Preference number: 5 (lower is better) Translates to: TTICWQREHTRSCQCQYSCMGRR*VYPHSF Trigger: AAATGAATGGGGGTACACCAACCTGCGCCCCATGCA...ACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCCAGCAAATGGTAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
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| CDS-3UTR CAA 90 bp | TCCATCATGGGTGGCAGGCTCTCTCCTCTCTTCATGGCTGGAACTGAGGTAGTTGCGATTTCTGGGACTTaGTTTCCTGCAGTTTGTATT | + |
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Preference number: 5 (lower is better) Translates to: SIMGGRLSPLFMAGTEVVAISGT*FPAVCI Trigger: AATACAAACTGCAGGAAACAAAGTCCCAGAAATCGC...AACTACCTCAGTTCCAGCCATGAAGAGAGGAGAGAGCCTGCCACCCATGATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025691.13 |
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| CDS-3UTR CAA 90 bp | CAGAAGCAGTCCCTGGAACCTGCTAGTCATTTGACCCTCACTGAGTATCAACTATTCCAGTGTCTGGGGTaGATTTTCCAAGGTCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: QKQSLEPASHLTLTEYQLFQCLG*IFQGPS Trigger: AGAAGGACCTTGGAAAATCAACCCCAGACACTGGAA...TAGTTGATACTCAGTGAGGGTCAAATGACTAGCAGGTTCCAGGGACTGCTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
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| CDS-3UTR CAA 90 bp | ATGCTGTCATGCATGATCTCATCTATCTTGCCCTCCTTGATGTTATTTTCTCGAACCAGGTTGGCATGGTaGACAGCAAAATGGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: MLSCMISSILPSLMLFSRTRLAW*TAKWAS Trigger: GGAGGCCCATTTTGCTGTCAACCATGCCAACCTGGT...TCGAGAAAATAACATCAAGGAGGGCAAGATAGATGAGATCATGCATGACAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| CDS-3UTR CAA 90 bp | GGCAAAGAGAACACACCAGGAGTTGCCAATGTCAATACAGTTGGCATTCATTTTAGTTTGTATTGCTGGTaGCTGTGCACGGCTCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: GKENTPGVANVNTVGIHFSLYCW*LCTAQG Trigger: CCCTTGAGCCGTGCACAGCAACCAGCAATACAAACT...AAAATGAATGCCAACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
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| CDS-3UTR CAA 90 bp | TTGACCCTCACTGAGTATCAACTACCATTTGCTGGCAAAGAGAACACACCAGGATTCCAGTGTCTGGGGTaGATTTTCCAAGGTCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: LTLTEYQLPFAGKENTPGFQCLG*IFQGPS Trigger: AGAAGGACCTTGGAAAATCAACCCCAGACACTGGAA...TCCTGGTGTGTTCTCTTTGCCAGCAAATGGTAGTTGATACTCAGTGAGGGTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
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| CDS-3UTR CAA 90 bp | CAGTTGGCATTCATTTTGTTTCCATCATGGGTGGCAGGCTCTCTCCTCTCTTCATCTATCTTGCCCTCCTaGATGTTATTTTCTCGAGCA | + |
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Preference number: 5 (lower is better) Translates to: QLAFILFPSWVAGSLLSSSILPS*MLFSRA Trigger: TGCTCGAGAAAATAACATCAAGGAGGGCAAGATAGA...TGAAGAGAGGAGAGAGCCTGCCACCCATGATGGAAACAAAATGAATGCCAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
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| CDS-3UTR CAA 90 bp | CTACCATTTGCTGGCAAAGAGAACACACCAGGAGTTGCCAATGTCAATACAGTTTTTGTTTCCTGCAGTTaGTATTGCTGGTTGCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: LPFAGKENTPGVANVNTVFVSCS*YCWLLC Trigger: GCACAGCAACCAGCAATACAAACTGCAGGAAACAAA...AACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCCAGCAAATGGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
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| CDS-3UTR CAA 90 bp | GCTGGCAAAGAGAACACACCAGGAGTTGCCAATGTCAATACAGTTGGCATTCATTCTATCTTGCCCTCCTaGATGTTATTTTCTCGAGCA | + |
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Preference number: 5 (lower is better) Translates to: AGKENTPGVANVNTVGIHSILPS*MLFSRA Trigger: TGCTCGAGAAAATAACATCAAGGAGGGCAAGATAGA...ATGAATGCCAACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
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| CDS-3UTR CAA 90 bp | AGAGGAAAAGAACTGTCCATCAATGGAAGGTCTTCAATTAACTGCGAGTATTTGACTCTTCCCATGAGATaGGTACCAGCACAGGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: RGKELSINGRSSINCEYLTLPMR*VPAQEQ Trigger: CTGCTCCTGTGCTGGTACCAATCTCATGGGAAGAGT...CAAATACTCGCAGTTAATTGAAGACCTTCCATTGATGGACAGTTCTTTTCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
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| CDS-3UTR CAA 90 bp | GGAAGGTCTTCAATTAACTGCGAGTATTTGTTTCAGTTTATAATTCTCCTCAGTACTCTTCCCATGAGATaGGTACCAGCACAGGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: GRSSINCEYLFQFIILLSTLPMR*VPAQEQ Trigger: CTGCTCCTGTGCTGGTACCAATCTCATGGGAAGAGT...ACTGAGGAGAATTATAAACTGAAACAAATACTCGCAGTTAATTGAAGACCTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025691.13 ENSMUST00000235232.2 |
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| CDS-3UTR CAA 90 bp | AAGCATACAGTGTATTTTAATCAATCAAAAGCACCAGTTCACAGATGGAATCACTTCAGGTTGGCATGGTaGACAGCAAAATGGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: KHTVYFNQSKAPVHRWNHFRLAW*TAKWAS Trigger: GGAGGCCCATTTTGCTGTCAACCATGCCAACCTGAA...GTGATTCCATCTGTGAACTGGTGCTTTTGATTGATTAAAATACACTGTATGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112472.4 |
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| CDS CCA 72 bp | TTACTTGTATCCTGCCTGCAAGATGTGCTGGGGCAATaGTGGCACAGAACTTGTGGGAGTGGCCAGCCAATG | + |
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Preference number: 6 (lower is better) Translates to: LLVSCLQDVLGQ*WHRTCGSGQPM Trigger: CATTGGCTGGCCACTCCCACAAGTTCTGTGCCACCATTGCCCCAGCACATCTTGCAGGCAGGATACAAGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| CDS CAA 72 bp | CCTGCAAGATGTGCTGGGGCAATGGTGGCACAGAACTaGTGGGAGTGGCCAGCCAATGTCTTGTTTAACTTG | + |
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Preference number: 6 (lower is better) Translates to: PARCAGAMVAQN*WEWPANVLFNL Trigger: CAAGTTAAACAAGACATTGGCTGGCCACTCCCACAAGTTCTGTGCCACCATTGCCCCAGCACATCTTGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| CDS CCA 72 bp | GCAAGATGTGCTGGGGCAATGGTGGCACAGAACTTGTaGGAGTGGCCAGCCAATGTCTTGTTTAACTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: ARCAGAMVAQNL*EWPANVLFNLK Trigger: CTTCAAGTTAAACAAGACATTGGCTGGCCACTCCCACAAGTTCTGTGCCACCATTGCCCCAGCACATCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| CDS TCA 72 bp | ACTTGTGGGAGTGGCCAGCCAATGTCTTGTTTAACTTaGAGCTCACTCCATGAGAGGGAGCCCATGCTTTAC | + |
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Preference number: 6 (lower is better) Translates to: TCGSGQPMSCLT*SSLHEREPMLY Trigger: GTAAAGCATGGGCTCCCTCTCATGGAGTGAGCTTCAAGTTAAACAAGACATTGGCTGGCCACTCCCACAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235709.2 |
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| CDS GCA 72 bp | ATATTTGTTTCCTGCAGTTTGTATTGCTGGTTGCTGTaGACGGCTCAAGGGTTCCATGTTCACACGAGGCGC | + |
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Preference number: 6 (lower is better) Translates to: IFVSCSLYCWLL*TAQGFHVHTRR Trigger: GCGCCTCGTGTGAACATGGAACCCTTGAGCCGTGCACAGCAACCAGCAATACAAACTGCAGGAAACAAATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235232.2 |
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| CDS CAA 90 bp | CCTTTTCCAGCACTTTCTTTTCCGGTACTTTCGATATATAAATATTaGTTTCCTGCAGTTTGTATTGCTGGTTGCTGTGCACGGCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: PFPALSFPVLSIYKY*FPAVCIAGCCARLK Trigger: CTTGAGCCGTGCACAGCAACCAGCAATACAAACTGCAGGAAACAAATATTTATATATCGAAAGTACCGGAAAAGAAAGTGCTGGAAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235232.2 |
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| CDS CAA 72 bp | GCACTTTCTTTTCCGGTACTTTCGATATATAAATATTaGTTTCCTGCAGTTTGTATTGCTGGTTGCTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: ALSFPVLSIYKY*FPAVCIAGCCA Trigger: TGCACAGCAACCAGCAATACAAACTGCAGGAAACAAATATTTATATATCGAAAGTACCGGAAAAGAAAGTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235232.2 |
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