Pregenerated sensors for FARSB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026245Ensembl transcript IDs: ENSMUST00000068333.14, ENSMUST00000170217.8, ENSMUST00000189529.7, ENSMUST00000190441.2
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCACGACGGGCTGCCAGCTCCTCACAGGTGGAAATGAGGACACGCTaGGACTCCTGCCCTCACCTGCCTCGCCTTCAACACCTTCAGTTG | + |
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Preference number: 1 (lower is better) Translates to: ARRAASSSQVEMRTR*DSCPHLPRLQHLQL Trigger: CAACTGAAGGTGTTGAAGGCGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGTGAGGAGCTGGCAGCCCGTCGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| 3UTR GCA 90 bp | ATAGCACATTTCACTTTATTAAACATTAACGCACAAATGGATATGTaGTGTAAAAGAGGGCTGAAGGACACCACAGGAGCAGAAAGGGAC | + |
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Preference number: 1 (lower is better) Translates to: IAHFTLLNINAQMDM*CKRGLKDTTGAERD Trigger: GTCCCTTTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACAGCACATATCCATTTGTGCGTTAATGTTTAATAAAGTGAAATGTGCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068333.14 ENSMUST00000189529.7 |
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| 3UTR-3UTR TCA 90 bp | GTCAGTGCTTCGGTGAAGCCAGCCGCAGCCATGTCAAGTCTGAGGAGCTCGGTGGCTGTAAAAGAGGGCTaGAGGACACCACAGGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: VSASVKPAAAMSSLRSSVAVKEG*RTPQEQ Trigger: CTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACAGC...CACCGAGCTCCTCAGACTTGACATGGCTGCGGCTGGCTTCACCGAAGCACTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
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| 3UTR-3UTR GCA 90 bp | CCGTCCAGGGAAAAAGGCAGAACCTGCAGACGCTTTGATCATGTAGCCCCCGCTATTCCGGAGAACTGCTaGTACAGCAAAAGGGCGCAC | + |
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Preference number: 2 (lower is better) Translates to: PSREKGRTCRRFDHVAPAIPENC*YSKRAH Trigger: GTGCGCCCTTTTGCTGTAGCAGCAGTTCTCCGGAAT...AGCGGGGGCTACATGATCAAAGCGTCTGCAGGTTCTGCCTTTTTCCCTGGACGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
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| 3UTR-3UTR CCA 90 bp | GTCAGTGCTTCGGTGAAGCCAGCCGCAGCCATGTCAAGTCTGAGGAGCTCGGTGGTGATAACCAGCTTTTaGATGTCTCCCTTGGGCATC | + |
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Preference number: 2 (lower is better) Translates to: VSASVKPAAAMSSLRSSVVITSF*MSPLGI Trigger: GATGCCCAAGGGAGACATCCAAAAGCTGGTTATCAC...CACCGAGCTCCTCAGACTTGACATGGCTGCGGCTGGCTTCACCGAAGCACTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
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| 3UTR-3UTR TCA 90 bp | CGCTTTGATCATGTAGCCCCCGCTTTCCTCACCAGGAGGCACATCGAGCAGCTGAGATTTCAAACAGTTTaGGAGGAAGGGGCATCTTCC | + |
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Preference number: 2 (lower is better) Translates to: RFDHVAPAFLTRRHIEQLRFQTV*EEGASS Trigger: GGAAGATGCCCCTTCCTCTCAAACTGTTTGAAATCT...CAGCTGCTCGATGTGCCTCCTGGTGAGGAAAGCGGGGGCTACATGATCAAAGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
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| 3UTR-3UTR TCA 90 bp | CGCTTTGATCATGTAGCCCCCGCTTTCCTCACCAGGAGGCACATCGAGCAGCTGTTGTTGAGAGGAAATTaGTTAGCTATGGTGTACGTT | + |
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Preference number: 2 (lower is better) Translates to: RFDHVAPAFLTRRHIEQLLLRGN*LAMVYV Trigger: AACGTACACCATAGCTAATCAATTTCCTCTCAACAA...CAGCTGCTCGATGTGCCTCCTGGTGAGGAAAGCGGGGGCTACATGATCAAAGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
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| 3UTR-3UTR GCA 90 bp | AGCCATGTCAAGTCTGAGGAGCTCGGTGAGCTTGTTGAGAGGAAATTGATTAGCGATATTCCGGAGAACTaGTGCTACAGCAAAAGGGCG | + |
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Preference number: 2 (lower is better) Translates to: SHVKSEELGELVERKLISDIPEN*CYSKRA Trigger: CGCCCTTTTGCTGTAGCAGCAGTTCTCCGGAATATC...GCTAATCAATTTCCTCTCAACAAGCTCACCGAGCTCCTCAGACTTGACATGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
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| 3UTR-3UTR GCA 90 bp | AGCCATGTCAAGTCTGAGGAGCTCGGTGAGCTTGTTGAGAGGAAATTGATTAGCTGCATGGATGACATCTaGTCTGGTCGGAGGAATTTC | + |
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Preference number: 2 (lower is better) Translates to: SHVKSEELGELVERKLISCMDDI*SGRRNF Trigger: GAAATTCCTCCGACCAGAGCAGATGTCATCCATGCA...GCTAATCAATTTCCTCTCAACAAGCTCACCGAGCTCCTCAGACTTGACATGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
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| 3UTR-3UTR TCA 90 bp | ACAGGAGCAGAAAGGGACACTCAGAGACCAACCTCACAAAAAGGGCTCAATATTAAAGTGTCCAAGTCGTaGGTTCCAATAGCAACCAAC | + |
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Preference number: 2 (lower is better) Translates to: TGAERDTQRPTSQKGLNIKVSKS*VPIATN Trigger: GTTGGTTGCTATTGGAACTCACGACTTGGACACTTT...AATATTGAGCCCTTTTTGTGAGGTTGGTCTCTGAGTGTCCCTTTCTGCTCCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
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| 3UTR-3UTR TCA 90 bp | TGCATAATTCTGTCCAGCAAGCCATGGATGATCTCAAACCCGGGAGTCTTGTTGCTTGAATTTGATATCTaGAGGACGTTTCGCGGTGTA | + |
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Preference number: 2 (lower is better) Translates to: CIILSSKPWMISNPGVLLLEFDI*RTFRGV Trigger: TACACCGCGAAACGTCCTTCAGATATCAAATTCAAG...CAACAAGACTCCCGGGTTTGAGATCATCCATGGCTTGCTGGACAGAATTATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
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| 3UTR-3UTR TCA 90 bp | TGCATAATTCTGTCCAGCAAGCCATGGATGATCTCAAACCCGGGAGTCTTGTTGATTTCAACCTCAATCTaGTTGCCGTCACCTATGACT | + |
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Preference number: 2 (lower is better) Translates to: CIILSSKPWMISNPGVLLISTSI*LPSPMT Trigger: AGTCATAGGTGACGGCAATCAGATTGAGGTTGAAAT...CAACAAGACTCCCGGGTTTGAGATCATCCATGGCTTGCTGGACAGAATTATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
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| 3UTR-3UTR GCA 90 bp | ACAGGAGCAGAAAGGGACACTCAGAGACCAACCTCACAAAAAGGGCTCAATATTCTCCACAATGTCACATaGATGGATGACATCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: TGAERDTQRPTSQKGLNILHNVT*MDDICS Trigger: AGAGCAGATGTCATCCATGCATGTGACATTGTGGAG...AATATTGAGCCCTTTTTGTGAGGTTGGTCTCTGAGTGTCCCTTTCTGCTCCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
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| 3UTR-3UTR TCA 90 bp | TGCATAATTCTGTCCAGCAAGCCATGGATGATCTCAAACCCGGGAGTCTTGTTGCTCTGGAAAGGTACTTaGTTTTCCATTAGGAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: CIILSSKPWMISNPGVLLLWKGT*FSIRRN Trigger: GTTTCTCCTAATGGAAAATCAAGTACCTTTCCAGAG...CAACAAGACTCCCGGGTTTGAGATCATCCATGGCTTGCTGGACAGAATTATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
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| 3UTR-3UTR GCA 90 bp | ACAGGAGCAGAAAGGGACACTCAGAGACCAACCTCACAAAAAGGGCTCAATATTGTCAAGCACGATTTTTaGTTTAGTGAAGTCAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: TGAERDTQRPTSQKGLNIVKHDF*FSEVSP Trigger: GGGACTGACTTCACTAAAGCAAAAATCGTGCTTGAC...AATATTGAGCCCTTTTTGTGAGGTTGGTCTCTGAGTGTCCCTTTCTGCTCCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
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| 3UTR-3UTR GCA 90 bp | ACAGGAGCAGAAAGGGACACTCAGAGACCAACCTCACAAAAAGGGCTCAATATTGAAAAAGGCAGAACCTaGAGACGCTTTGATCATGTA | + |
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Preference number: 2 (lower is better) Translates to: TGAERDTQRPTSQKGLNIEKGRT*RRFDHV Trigger: TACATGATCAAAGCGTCTGCAGGTTCTGCCTTTTTC...AATATTGAGCCCTTTTTGTGAGGTTGGTCTCTGAGTGTCCCTTTCTGCTCCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
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| 3UTR-3UTR CCA 90 bp | ACAGGAGCAGAAAGGGACACTCAGAGACCAACCTCACAAAAAGGGCTCAATATTTCAGCAATATCTTCTTaGGAGCACAGAGCAAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: TGAERDTQRPTSQKGLNISAISS*EHRAKV Trigger: GACTTTTGCTCTGTGCTCCCAAGAAGATATTGCTGA...AATATTGAGCCCTTTTTGTGAGGTTGGTCTCTGAGTGTCCCTTTCTGCTCCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
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| 3UTR-3UTR TCA 90 bp | GCAAGGAGTCAGATAGCACATTTCACTTTATTAAACATTAACGCACAAATGGATGCTGTAAAAGAGGGCTaGAGGACACCACAGGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: ARSQIAHFTLLNINAQMDAVKEG*RTPQEQ Trigger: CTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACAGC...ATCCATTTGTGCGTTAATGTTTAATAAAGTGAAATGTGCTATCTGACTCCTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
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| 3UTR TCA 72 bp | ACGCACGACGGGCTGCCAGCTCCTCACAGGTGGAAATaGGGACACGCTGCGACTCCTGCCCTCACCTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: THDGLPAPHRWK*GHAATPALTCL Trigger: GAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGTGAGGAGCTGGCAGCCCGTCGTGCGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| 3UTR GCA 72 bp | GCTGCCAGCTCCTCACAGGTGGAAATGAGGACACGCTaGGACTCCTGCCCTCACCTGCCTCGCCTTCAACAC | + |
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Preference number: 3 (lower is better) Translates to: AASSSQVEMRTR*DSCPHLPRLQH Trigger: GTGTTGAAGGCGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGTGAGGAGCTGGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| 3UTR-3UTR CAA 90 bp | CGACGGGCTGCCAGCTCCTCACAGGTGGAAATGAGGACACGCTGCGACTCCTGCCTTCAACACCTTCAGTaGCTTGAGCTTCCACATAAG | + |
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Preference number: 3 (lower is better) Translates to: RRAASSSQVEMRTRCDSCLQHLQ*LELPHK Trigger: CTTATGTGGAAGCTCAAGCAACTGAAGGTGTTGAAG...GCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGTGAGGAGCTGGCAGCCCGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| 3UTR GCA 72 bp | CCCCCGCTTTCCTCACCAGGAGGCACATCGAGCAGCTaGATAATTCTGTCCAGCAAGCCATGGATGATCTCA | + |
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Preference number: 3 (lower is better) Translates to: PPLSSPGGTSSS*IILSSKPWMIS Trigger: TGAGATCATCCATGGCTTGCTGGACAGAATTATGCAGCTGCTCGATGTGCCTCCTGGTGAGGAAAGCGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
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| 3UTR GCA 72 bp | AGCAATATCTTCTTGGGAGCACAGAGCAAAAGTCAGTaGTTCGGTGAAGCCAGCCGCAGCCATGTCAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: SNIFLGAQSKSQ*FGEASRSHVKS Trigger: AGACTTGACATGGCTGCGGCTGGCTTCACCGAAGCACTGACTTTTGCTCTGTGCTCCCAAGAAGATATTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
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| 3UTR-3UTR CAA 90 bp | CCGTCCAGGGAAAAAGGCAGAACCTGCAGACGCTTTGATCATGTAGCCCCCGCTTTCAGAGGCTTGAATTaGATATCTGAAGGACGTTTC | + |
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Preference number: 3 (lower is better) Translates to: PSREKGRTCRRFDHVAPAFRGLN*ISEGRF Trigger: GAAACGTCCTTCAGATATCAAATTCAAGCCTCTGAA...AGCGGGGGCTACATGATCAAAGCGTCTGCAGGTTCTGCCTTTTTCCCTGGACGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
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| 3UTR GCA 72 bp | CAGGAACTATTAGTGAAGCAAGATGCTGATCTGCCTTaGAGACAGTCCACAGCATCCAGTGATTCGGTTTCC | + |
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Preference number: 3 (lower is better) Translates to: QELLVKQDADLP*RQSTASSDSVS Trigger: GGAAACCGAATCACTGGATGCTGTGGACTGTCTGCAAGGCAGATCAGCATCTTGCTTCACTAATAGTTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| 3UTR CCA 72 bp | GAGATATCCAGGCCAAGCTTGTCAGCAATATCTTCTTaGGAGCACAGAGCAAAAGTCAGTGCTTCGGTGAAG | + |
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Preference number: 3 (lower is better) Translates to: EISRPSLSAISS*EHRAKVSASVK Trigger: CTTCACCGAAGCACTGACTTTTGCTCTGTGCTCCCAAGAAGATATTGCTGACAAGCTTGGCCTGGATATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
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| 3UTR TCA 72 bp | TTAACGCACAAATGGATATGTGCTGTAAAAGAGGGCTaGAGGACACCACAGGAGCAGAAAGGGACACTCAGA | + |
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Preference number: 3 (lower is better) Translates to: LTHKWICAVKEG*RTPQEQKGTLR Trigger: TCTGAGTGTCCCTTTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACAGCACATATCCATTTGTGCGTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068333.14 ENSMUST00000189529.7 |
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| 3UTR TCA 72 bp | AGTCTGAGGAGCTCGGTGAGCTTGTTGAGAGGAAATTaGTTAGCTATGGTGTACGTTTTCGGCAGAGTCATC | + |
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Preference number: 3 (lower is better) Translates to: SLRSSVSLLRGN*LAMVYVFGRVI Trigger: GATGACTCTGCCGAAAACGTACACCATAGCTAATCAATTTCCTCTCAACAAGCTCACCGAGCTCCTCAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
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| 3UTR-3UTR CAA 90 bp | TCTCAAACCCGGGAGTCTTGTTGTAATAAACAGCACAGAGATGCCTGTAGTTTTCGGTCTTTAGTGAACTaGATATTCCGGAGAACTGCT | + |
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Preference number: 3 (lower is better) Translates to: SQTRESCCNKQHRDACSFRSLVN*IFRRTA Trigger: AGCAGTTCTCCGGAATATCAAGTTCACTAAAGACCG...AAAACTACAGGCATCTCTGTGCTGTTTATTACAACAAGACTCCCGGGTTTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
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| 3UTR-3UTR CAA 90 bp | GAGGAGCTCGGTGAGCTTGTTGAGAGGAAATTGATTAGCTATGGTGTACGTTTTGTCTTATTCAGAGGCTaGAATTTGATATCTGAAGGA | + |
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Preference number: 3 (lower is better) Translates to: EELGELVERKLISYGVRFVLFRG*NLISEG Trigger: TCCTTCAGATATCAAATTCAAGCCTCTGAATAAGAC...AAAACGTACACCATAGCTAATCAATTTCCTCTCAACAAGCTCACCGAGCTCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
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| CDS-3UTR CCA 90 bp | CGACGGGCTGCCAGCTCCTCACAGGTGGAAATGAGGACACGCTGCGACTCCTGCGTCCGGCCCAGGGCTTaGAAGAGCAGGTCTCGCTTT | + |
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Preference number: 4 (lower is better) Translates to: RRAASSSQVEMRTRCDSCVRPRA*KSRSRF Trigger: AAAGCGAGACCTGCTCTTCCAAGCCCTGGGCCGGAC...GCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGTGAGGAGCTGGCAGCCCGTCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS-3UTR GCA 90 bp | TCCTCACAGGTGGAAATGAGGACACGCTGCGACTCCTGCCCTCACCTGCCTCGCATTCCGGAGAACTGCTaGTACAGCAAAAGGGCGCAC | + |
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Preference number: 4 (lower is better) Translates to: SSQVEMRTRCDSCPHLPRIPENC*YSKRAH Trigger: GTGCGCCCTTTTGCTGTAGCAGCAGTTCTCCGGAAT...GCGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGTGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS-3UTR CCA 90 bp | ACAGGTGGAAATGAGGACACGCTGCGACTCCTGCCCTCACCTGCCTCGCCTTCACTTTCTTTGAAGACCTaGAGGCCCCGAGCCAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: TGGNEDTLRLLPSPASPSLSLKT*RPRASP Trigger: AGGACTGGCTCGGGGCCTCCAGGTCTTCAAAGAAAG...TGAAGGCGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS-3UTR CCA 90 bp | ACAGGTGGAAATGAGGACACGCTGCGACTCCTGCCCTCACCTGCCTCGCCTTCACTGTCCAGCAAGCCATaGATGATCTCAAACCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: TGGNEDTLRLLPSPASPSLSSKP*MISNPG Trigger: TCCCGGGTTTGAGATCATCCATGGCTTGCTGGACAG...TGAAGGCGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS-3UTR TCA 90 bp | CTCCTCACAGGTGGAAATGAGGACACGCTGCGACTCCTGCCCTCACCTGCCTCGGTCACCTATGACTTCTaGCTTCAGACACATCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LLTGGNEDTLRLLPSPASVTYDF*LQTHPG Trigger: ACCAGGATGTGTCTGAAGTCAGAAGTCATAGGTGAC...CGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGTGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS-3UTR GCA 90 bp | GGAAATGAGGACACGCTGCGACTCCTGCCCTCACCTGCCTCGCCTTCAACACCTGATATTCCGGAGAACTaGTGCTACAGCAAAAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: GNEDTLRLLPSPASPSTPDIPEN*CYSKRA Trigger: CGCCCTTTTGCTGTAGCAGCAGTTCTCCGGAATATC...AGGTGTTGAAGGCGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS-3UTR GCA 90 bp | GCTGCCAGCTCCTCACAGGTGGAAATGAGGACACGCTGCGACTCCTGCCCTCACTGCATGGATGACATCTaGTCTGGTCGGAGGAATTTC | + |
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Preference number: 4 (lower is better) Translates to: AASSSQVEMRTRCDSCPHCMDDI*SGRRNF Trigger: GAAATTCCTCCGACCAGAGCAGATGTCATCCATGCA...GTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGTGAGGAGCTGGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS-3UTR CCA 90 bp | ACAGGTGGAAATGAGGACACGCTGCGACTCCTGCCCTCACCTGCCTCGCCTTCAGGAGGTCGTATCTGTTaGCAGGGACGTCAATCTTGT | + |
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Preference number: 4 (lower is better) Translates to: TGGNEDTLRLLPSPASPSGGRIC*QGRQSC Trigger: ACAAGATTGACGTCCCTGCCAACAGATACGACCTCC...TGAAGGCGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS-3UTR GCA 90 bp | ACAGGTGGAAATGAGGACACGCTGCGACTCCTGCCCTCACCTGCCTCGCCTTCAGAGCTTGGCGAGATTTaGAGGAGTTTCTCTGATTCC | + |
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Preference number: 4 (lower is better) Translates to: TGGNEDTLRLLPSPASPSELGEI*RSFSDS Trigger: GGAATCAGAGAAACTCCTGCAAATCTCGCCAAGCTC...TGAAGGCGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS-3UTR GCA 90 bp | CGACGGGCTGCCAGCTCCTCACAGGTGGAAATGAGGACACGCTGCGACTCCTGCGAAAAAGGCAGAACCTaGAGACGCTTTGATCATGTA | + |
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Preference number: 4 (lower is better) Translates to: RRAASSSQVEMRTRCDSCEKGRT*RRFDHV Trigger: TACATGATCAAAGCGTCTGCAGGTTCTGCCTTTTTC...GCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGTGAGGAGCTGGCAGCCCGTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS-3UTR CCA 90 bp | TGCTGTAAAAGAGGGCTGAAGGACACCACAGGAGCAGAAAGGGACACTCAGAGAGTCCGGCCCAGGGCTTaGAAGAGCAGGTCTCGCTTT | + |
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Preference number: 4 (lower is better) Translates to: CCKRGLKDTTGAERDTQRVRPRA*KSRSRF Trigger: AAAGCGAGACCTGCTCTTCCAAGCCCTGGGCCGGAC...TCTCTGAGTGTCCCTTTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068333.14 ENSMUST00000189529.7 |
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| CDS-3UTR CCA 90 bp | TCCTCACAGGTGGAAATGAGGACACGCTGCGACTCCTGCCCTCACCTGCCTCGCACAATGTCACATGCATaGATGACATCTGCTCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: SSQVEMRTRCDSCPHLPRTMSHA*MTSALV Trigger: GACCAGAGCAGATGTCATCCATGCATGTGACATTGT...GCGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGTGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS-3UTR TCA 90 bp | ACAGGTGGAAATGAGGACACGCTGCGACTCCTGCCCTCACCTGCCTCGCCTTCAAAAGTGTCCAAGTCGTaGGTTCCAATAGCAACCAAC | + |
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Preference number: 4 (lower is better) Translates to: TGGNEDTLRLLPSPASPSKVSKS*VPIATN Trigger: GTTGGTTGCTATTGGAACTCACGACTTGGACACTTT...TGAAGGCGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS-3UTR TCA 90 bp | ACAGGTGGAAATGAGGACACGCTGCGACTCCTGCCCTCACCTGCCTCGCCTTCAAGATTTCAAACAGTTTaGGAGGAAGGGGCATCTTCC | + |
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Preference number: 4 (lower is better) Translates to: TGGNEDTLRLLPSPASPSRFQTV*EEGASS Trigger: GGAAGATGCCCCTTCCTCTCAAACTGTTTGAAATCT...TGAAGGCGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS-3UTR TCA 90 bp | AGCAACGCACGACGGGCTGCCAGCTCCTCACAGGTGGAAATGAGGACACGCTGCAAAAGGGCTCAATATTaGTTTCCAGAGAGGAACAGG | + |
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Preference number: 4 (lower is better) Translates to: SNARRAASSSQVEMRTRCKRAQY*FPERNR Trigger: CCTGTTCCTCTCTGGAAATCAATATTGAGCCCTTTT...GCAGCGTGTCCTCATTTCCACCTGTGAGGAGCTGGCAGCCCGTCGTGCGTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS-3UTR TCA 90 bp | ACAGGTGGAAATGAGGACACGCTGCGACTCCTGCCCTCACCTGCCTCGCCTTCACTTGAATTTGATATCTaGAGGACGTTTCGCGGTGTA | + |
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Preference number: 4 (lower is better) Translates to: TGGNEDTLRLLPSPASPSLEFDI*RTFRGV Trigger: TACACCGCGAAACGTCCTTCAGATATCAAATTCAAG...TGAAGGCGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS-3UTR TCA 90 bp | GGAAATGAGGACACGCTGCGACTCCTGCCCTCACCTGCCTCGCCTTCAACACCTATTTCAACCTCAATCTaGTTGCCGTCACCTATGACT | + |
|
Preference number: 4 (lower is better) Translates to: GNEDTLRLLPSPASPSTPISTSI*LPSPMT Trigger: AGTCATAGGTGACGGCAATCAGATTGAGGTTGAAAT...AGGTGTTGAAGGCGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
||
| CDS-3UTR TCA 90 bp | AATGAGGACACGCTGCGACTCCTGCCCTCACCTGCCTCGCCTTCAACACCTTCAAGCTTCCCAATGCTTTaGCCTCCAACAAAGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NEDTLRLLPSPASPSTPSSFPML*PPTKIS Trigger: TGAGATCTTTGTTGGAGGTCAAAGCATTGGGAAGCT...TGAAGGTGTTGAAGGCGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
||
| CDS-3UTR CCA 90 bp | TTCCACACTAGTGTAAGCAACGCACGACGGGCTGCCAGCTCCTCACAGGTGGAAGTGATAACCAGCTTTTaGATGTCTCCCTTGGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: FHTSVSNARRAASSSQVEVITSF*MSPLGI Trigger: GATGCCCAAGGGAGACATCCAAAAGCTGGTTATCAC...TTCCACCTGTGAGGAGCTGGCAGCCCGTCGTGCGTTGCTTACACTAGTGTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
||
| CDS-3UTR TCA 90 bp | GGAAATGAGGACACGCTGCGACTCCTGCCCTCACCTGCCTCGCCTTCAACACCTCTCTGGAAAGGTACTTaGTTTTCCATTAGGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GNEDTLRLLPSPASPSTPLWKGT*FSIRRN Trigger: GTTTCTCCTAATGGAAAATCAAGTACCTTTCCAGAG...AGGTGTTGAAGGCGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCACAGGTGGAAATGAGGACACGCTGCGACTCCTGCCCTCACCTGCCTCGCTTGTTGAGAGGAAATTaGTTAGCTATGGTGTACGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSQVEMRTRCDSCPHLPRLLRGN*LAMVYV Trigger: AACGTACACCATAGCTAATCAATTTCCTCTCAACAA...GCGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGTGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGTAAAAGAGGGCTGAAGGACACCACAGGAGCAGAAAGGGACACTCAGAGAATTCCGGAGAACTGCTaGTACAGCAAAAGGGCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CCKRGLKDTTGAERDTQRIPENC*YSKRAH Trigger: GTGCGCCCTTTTGCTGTAGCAGCAGTTCTCCGGAAT...TCTCTGAGTGTCCCTTTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| CDS-3UTR CCA 90 bp | AAGAAGGGTAGTGCGCGCCACCTGGAACTCAGCGGTTTTAGGATTACTTATGTGCTTTCTTTGAAGACCTaGAGGCCCCGAGCCAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KKGSARHLELSGFRITYVLSLKT*RPRASP Trigger: AGGACTGGCTCGGGGCCTCCAGGTCTTCAAAGAAAG...CACATAAGTAATCCTAAAACCGCTGAGTTCCAGGTGGCGCGCACTACCCTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
||
| CDS-3UTR CCA 90 bp | AATGAGGACACGCTGCGACTCCTGCCCTCACCTGCCTCGCCTTCAACACCTTCATCAGCAATATCTTCTTaGGAGCACAGAGCAAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: NEDTLRLLPSPASPSTPSSAISS*EHRAKV Trigger: GACTTTTGCTCTGTGCTCCCAAGAAGATATTGCTGA...TGAAGGTGTTGAAGGCGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
||
| CDS-3UTR TCA 90 bp | TGTAAAAGAGGGCTGAAGGACACCACAGGAGCAGAAAGGGACACTCAGAGACCAGTCACCTATGACTTCTaGCTTCAGACACATCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CKRGLKDTTGAERDTQRPVTYDF*LQTHPG Trigger: ACCAGGATGTGTCTGAAGTCAGAAGTCATAGGTGAC...TGGTCTCTGAGTGTCCCTTTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| CDS-3UTR GCA 90 bp | TGTAAAAGAGGGCTGAAGGACACCACAGGAGCAGAAAGGGACACTCAGAGACCAGAGCTTGGCGAGATTTaGAGGAGTTTCTCTGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: CKRGLKDTTGAERDTQRPELGEI*RSFSDS Trigger: GGAATCAGAGAAACTCCTGCAAATCTCGCCAAGCTC...TGGTCTCTGAGTGTCCCTTTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| CDS-3UTR GCA 90 bp | TGTAAAAGAGGGCTGAAGGACACCACAGGAGCAGAAAGGGACACTCAGAGACCATGCATGGATGACATCTaGTCTGGTCGGAGGAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: CKRGLKDTTGAERDTQRPCMDDI*SGRRNF Trigger: GAAATTCCTCCGACCAGAGCAGATGTCATCCATGCA...TGGTCTCTGAGTGTCCCTTTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| CDS-3UTR CCA 90 bp | TCTCAAACCCGGGAGTCTTGTTGTAATAAACAGCACAGAGATGCCTGTAGTTTTGTCCGGCCCAGGGCTTaGAAGAGCAGGTCTCGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SQTRESCCNKQHRDACSFVRPRA*KSRSRF Trigger: AAAGCGAGACCTGCTCTTCCAAGCCCTGGGCCGGAC...AAAACTACAGGCATCTCTGTGCTGTTTATTACAACAAGACTCCCGGGTTTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
||
| CDS-3UTR TCA 90 bp | TGCTGTAAAAGAGGGCTGAAGGACACCACAGGAGCAGAAAGGGACACTCAGAGAAAAGTGTCCAAGTCGTaGGTTCCAATAGCAACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CCKRGLKDTTGAERDTQRKVSKS*VPIATN Trigger: GTTGGTTGCTATTGGAACTCACGACTTGGACACTTT...TCTCTGAGTGTCCCTTTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| CDS-3UTR TCA 90 bp | TGTAAAAGAGGGCTGAAGGACACCACAGGAGCAGAAAGGGACACTCAGAGACCAAGATTTCAAACAGTTTaGGAGGAAGGGGCATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CKRGLKDTTGAERDTQRPRFQTV*EEGASS Trigger: GGAAGATGCCCCTTCCTCTCAAACTGTTTGAAATCT...TGGTCTCTGAGTGTCCCTTTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| CDS-3UTR TCA 90 bp | CTATTAGTGAAGCAAGATGCTGATCTGCCTTGCAGACAGTCCACAGCATCCAGTGTGATAACATCAGGATaGAGGACGCCTAGCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLVKQDADLPCRQSTASSVITSG*RTPSFP Trigger: TGGGAAGCTAGGCGTCCTTCATCCTGATGTTATCAC...ACTGGATGCTGTGGACTGTCTGCAAGGCAGATCAGCATCTTGCTTCACTAATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
||
| CDS-3UTR GCA 90 bp | TGTAAAAGAGGGCTGAAGGACACCACAGGAGCAGAAAGGGACACTCAGAGACCACTCCACAATGTCACATaGATGGATGACATCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CKRGLKDTTGAERDTQRPLHNVT*MDDICS Trigger: AGAGCAGATGTCATCCATGCATGTGACATTGTGGAG...TGGTCTCTGAGTGTCCCTTTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| CDS-3UTR GCA 90 bp | GCACAAATGGATATGTGCTGTAAAAGAGGGCTGAAGGACACCACAGGAGCAGAAGTGCACTGCCTTTGTTaGAGAGATATCCAGGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AQMDMCCKRGLKDTTGAEVHCLC*RDIQAK Trigger: CTTGGCCTGGATATCTCTGCAACAAAGGCAGTGCAC...TTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACAGCACATATCCATTTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| CDS-3UTR GCA 90 bp | CTATTAGTGAAGCAAGATGCTGATCTGCCTTGCAGACAGTCCACAGCATCCAGTGTGCACTGCCTTTGTTaGAGAGATATCCAGGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLVKQDADLPCRQSTASSVHCLC*RDIQAK Trigger: CTTGGCCTGGATATCTCTGCAACAAAGGCAGTGCAC...ACTGGATGCTGTGGACTGTCTGCAAGGCAGATCAGCATCTTGCTTCACTAATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
||
| CDS-3UTR GCA 90 bp | CTATTAGTGAAGCAAGATGCTGATCTGCCTTGCAGACAGTCCACAGCATCCAGTGGCACATCGAGCAGCTaGATAATTCTGTCCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLVKQDADLPCRQSTASSGTSSS*IILSSK Trigger: CTTGCTGGACAGAATTATGCAGCTGCTCGATGTGCC...ACTGGATGCTGTGGACTGTCTGCAAGGCAGATCAGCATCTTGCTTCACTAATAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
||
| CDS-3UTR TCA 90 bp | TGTAAAAGAGGGCTGAAGGACACCACAGGAGCAGAAAGGGACACTCAGAGACCACTTGAATTTGATATCTaGAGGACGTTTCGCGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CKRGLKDTTGAERDTQRPLEFDI*RTFRGV Trigger: TACACCGCGAAACGTCCTTCAGATATCAAATTCAAG...TGGTCTCTGAGTGTCCCTTTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| CDS-3UTR GCA 90 bp | TGTAAAAGAGGGCTGAAGGACACCACAGGAGCAGAAAGGGACACTCAGAGACCAGAAAAAGGCAGAACCTaGAGACGCTTTGATCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: CKRGLKDTTGAERDTQRPEKGRT*RRFDHV Trigger: TACATGATCAAAGCGTCTGCAGGTTCTGCCTTTTTC...TGGTCTCTGAGTGTCCCTTTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| CDS-3UTR CCA 90 bp | GCACAAATGGATATGTGCTGTAAAAGAGGGCTGAAGGACACCACAGGAGCAGAAGTGATAACCAGCTTTTaGATGTCTCCCTTGGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: AQMDMCCKRGLKDTTGAEVITSF*MSPLGI Trigger: GATGCCCAAGGGAGACATCCAAAAGCTGGTTATCAC...TTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACAGCACATATCCATTTGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| CDS-3UTR CCA 90 bp | TGTAAAAGAGGGCTGAAGGACACCACAGGAGCAGAAAGGGACACTCAGAGACCATCAGCAATATCTTCTTaGGAGCACAGAGCAAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CKRGLKDTTGAERDTQRPSAISS*EHRAKV Trigger: GACTTTTGCTCTGTGCTCCCAAGAAGATATTGCTGA...TGGTCTCTGAGTGTCCCTTTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| CDS-3UTR TCA 90 bp | TGTAAAAGAGGGCTGAAGGACACCACAGGAGCAGAAAGGGACACTCAGAGACCAGCTTCAACTGTAAACTaGTTTTCACAGTGTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: CKRGLKDTTGAERDTQRPASTVN*FSQCSL Trigger: CAGTGAACACTGTGAAAATCAGTTTACAGTTGAAGC...TGGTCTCTGAGTGTCCCTTTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| CDS-3UTR TCA 90 bp | TGTAAAAGAGGGCTGAAGGACACCACAGGAGCAGAAAGGGACACTCAGAGACCACTCTGGAAAGGTACTTaGTTTTCCATTAGGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CKRGLKDTTGAERDTQRPLWKGT*FSIRRN Trigger: GTTTCTCCTAATGGAAAATCAAGTACCTTTCCAGAG...TGGTCTCTGAGTGTCCCTTTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| CDS-3UTR TCA 90 bp | GCACAAATGGATATGTGCTGTAAAAGAGGGCTGAAGGACACCACAGGAGCAGAAAGCTTCCCAATGCTTTaGCCTCCAACAAAGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AQMDMCCKRGLKDTTGAESFPML*PPTKIS Trigger: TGAGATCTTTGTTGGAGGTCAAAGCATTGGGAAGCT...TTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACAGCACATATCCATTTGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| 3UTR CAA 72 bp | AAGTCTGAGGAGCTCGGTGAGCTTGTTGAGAGGAAATaGATTAGCTATGGTGTACGTTTTCGGCAGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KSEELGELVERK*ISYGVRFRQSH Trigger: ATGACTCTGCCGAAAACGTACACCATAGCTAATCAATTTCCTCTCAACAAGCTCACCGAGCTCCTCAGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
||
| CDS-3UTR GCA 90 bp | CTCCTCCAGGAACTATTAGTGAAGCAAGATGCTGATCTGCCTTGCAGACAGTCCTCGCACCTACATCTTTaGCAGAATCTTTTACTACAA | + |
|
Preference number: 4 (lower is better) Translates to: LLQELLVKQDADLPCRQSSHLHL*QNLLLQ Trigger: TTGTAGTAAAAGATTCTGGCAAAGATGTAGGTGCGA...GGACTGTCTGCAAGGCAGATCAGCATCTTGCTTCACTAATAGTTCCTGGAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
||
| CDS-3UTR TCA 90 bp | TGCAGCTACGCAAGGAGTCAGATAGCACATTTCACTTTATTAAACATTAACGCAGTGATAACATCAGGATaGAGGACGCCTAGCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CSYARSQIAHFTLLNINAVITSG*RTPSFP Trigger: TGGGAAGCTAGGCGTCCTTCATCCTGATGTTATCAC...TGCGTTAATGTTTAATAAAGTGAAATGTGCTATCTGACTCCTTGCGTAGCTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| CDS-3UTR GCA 90 bp | TGCAGCTACGCAAGGAGTCAGATAGCACATTTCACTTTATTAAACATTAACGCAGATATTCCGGAGAACTaGTGCTACAGCAAAAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: CSYARSQIAHFTLLNINADIPEN*CYSKRA Trigger: CGCCCTTTTGCTGTAGCAGCAGTTCTCCGGAATATC...TGCGTTAATGTTTAATAAAGTGAAATGTGCTATCTGACTCCTTGCGTAGCTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| CDS-3UTR GCA 90 bp | GCACAAATGGATATGTGCTGTAAAAGAGGGCTGAAGGACACCACAGGAGCAGAATCGCACCTACATCTTTaGCAGAATCTTTTACTACAA | + |
|
Preference number: 4 (lower is better) Translates to: AQMDMCCKRGLKDTTGAESHLHL*QNLLLQ Trigger: TTGTAGTAAAAGATTCTGGCAAAGATGTAGGTGCGA...TTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACAGCACATATCCATTTGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| CDS-3UTR CCA 90 bp | GCAAGGAGTCAGATAGCACATTTCACTTTATTAAACATTAACGCACAAATGGATCTTTCTTTGAAGACCTaGAGGCCCCGAGCCAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ARSQIAHFTLLNINAQMDLSLKT*RPRASP Trigger: AGGACTGGCTCGGGGCCTCCAGGTCTTCAAAGAAAG...ATCCATTTGTGCGTTAATGTTTAATAAAGTGAAATGTGCTATCTGACTCCTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| CDS-3UTR CCA 90 bp | GCAAGGAGTCAGATAGCACATTTCACTTTATTAAACATTAACGCACAAATGGATCTGTCCAGCAAGCCATaGATGATCTCAAACCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ARSQIAHFTLLNINAQMDLSSKP*MISNPG Trigger: TCCCGGGTTTGAGATCATCCATGGCTTGCTGGACAG...ATCCATTTGTGCGTTAATGTTTAATAAAGTGAAATGTGCTATCTGACTCCTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| CDS-3UTR GCA 90 bp | CTTTATTTACCAACTCATCTCCTCCAGGAACTATTAGTGAAGCAAGATGCTGATCTCCACAATGTCACATaGATGGATGACATCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LYLPTHLLQELLVKQDADLHNVT*MDDICS Trigger: AGAGCAGATGTCATCCATGCATGTGACATTGTGGAG...ATCAGCATCTTGCTTCACTAATAGTTCCTGGAGGAGATGAGTTGGTAAATAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
||
| CDS-3UTR GCA 90 bp | GCAAGGAGTCAGATAGCACATTTCACTTTATTAAACATTAACGCACAAATGGATGGCACATCGAGCAGCTaGATAATTCTGTCCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ARSQIAHFTLLNINAQMDGTSSS*IILSSK Trigger: CTTGCTGGACAGAATTATGCAGCTGCTCGATGTGCC...ATCCATTTGTGCGTTAATGTTTAATAAAGTGAAATGTGCTATCTGACTCCTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| CDS-3UTR CCA 90 bp | GCAAGGAGTCAGATAGCACATTTCACTTTATTAAACATTAACGCACAAATGGATGGAGGTCGTATCTGTTaGCAGGGACGTCAATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ARSQIAHFTLLNINAQMDGGRIC*QGRQSC Trigger: ACAAGATTGACGTCCCTGCCAACAGATACGACCTCC...ATCCATTTGTGCGTTAATGTTTAATAAAGTGAAATGTGCTATCTGACTCCTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| CDS-3UTR CCA 90 bp | TGCAGCTACGCAAGGAGTCAGATAGCACATTTCACTTTATTAAACATTAACGCAACAATGTCACATGCATaGATGACATCTGCTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CSYARSQIAHFTLLNINATMSHA*MTSALV Trigger: GACCAGAGCAGATGTCATCCATGCATGTGACATTGT...TGCGTTAATGTTTAATAAAGTGAAATGTGCTATCTGACTCCTTGCGTAGCTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| CDS-3UTR GCA 90 bp | TGCAGCTACGCAAGGAGTCAGATAGCACATTTCACTTTATTAAACATTAACGCAGTCAAGCACGATTTTTaGTTTAGTGAAGTCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CSYARSQIAHFTLLNINAVKHDF*FSEVSP Trigger: GGGACTGACTTCACTAAAGCAAAAATCGTGCTTGAC...TGCGTTAATGTTTAATAAAGTGAAATGTGCTATCTGACTCCTTGCGTAGCTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| CDS-3UTR TCA 90 bp | GCAAGGAGTCAGATAGCACATTTCACTTTATTAAACATTAACGCACAAATGGATATTTCAACCTCAATCTaGTTGCCGTCACCTATGACT | + |
|
Preference number: 4 (lower is better) Translates to: ARSQIAHFTLLNINAQMDISTSI*LPSPMT Trigger: AGTCATAGGTGACGGCAATCAGATTGAGGTTGAAAT...ATCCATTTGTGCGTTAATGTTTAATAAAGTGAAATGTGCTATCTGACTCCTTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| CDS-3UTR TCA 90 bp | TGCAGCTACGCAAGGAGTCAGATAGCACATTTCACTTTATTAAACATTAACGCATTGTTGAGAGGAAATTaGTTAGCTATGGTGTACGTT | + |
|
Preference number: 4 (lower is better) Translates to: CSYARSQIAHFTLLNINALLRGN*LAMVYV Trigger: AACGTACACCATAGCTAATCAATTTCCTCTCAACAA...TGCGTTAATGTTTAATAAAGTGAAATGTGCTATCTGACTCCTTGCGTAGCTGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| CDS-3UTR TCA 90 bp | GCAAGGAGTCAGATAGCACATTTCACTTTATTAAACATTAACGCACAAATGGATAAAAGGGCTCAATATTaGTTTCCAGAGAGGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: ARSQIAHFTLLNINAQMDKRAQY*FPERNR Trigger: CCTGTTCCTCTCTGGAAATCAATATTGAGCCCTTTT...ATCCATTTGTGCGTTAATGTTTAATAAAGTGAAATGTGCTATCTGACTCCTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
||
| CDS-3UTR CAA 90 bp | AATGAGGACACGCTGCGACTCCTGCCCTCACCTGCCTCGCCTTCAACACCTTCAGGTCCGGCCCAGGGCTaGGAAGAGCAGGTCTCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: NEDTLRLLPSPASPSTPSGPAQG*EEQVSL Trigger: AAGCGAGACCTGCTCTTCCAAGCCCTGGGCCGGACC...TGAAGGTGTTGAAGGCGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
||
| CDS-3UTR CAA 90 bp | TCCTCACAGGTGGAAATGAGGACACGCTGCGACTCCTGCCCTCACCTGCCTCGCGCTTTGATCCTTTCTTaGAAGACCTGGAGGCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SSQVEMRTRCDSCPHLPRALILS*KTWRPR Trigger: TCGGGGCCTCCAGGTCTTCAAAGAAAGGATCAAAGC...GCGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGTGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
||
| CDS CCA 90 bp | GGAGGCCCCGAGCCAGTCCTTCCAGACACAGGAGGTCGTATCTGTTaGCAGGGACGTCAATCTTGTAAAGCACAACATCTGAGGCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GGPEPVLPDTGGRIC*QGRQSCKAQHLRPP Trigger: AGGGGGCCTCAGATGTTGTGCTTTACAAGATTGACGTCCCTGCCAACAGATACGACCTCCTGTGTCTGGAAGGACTGGCTCGGGGCCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068333.14 ENSMUST00000170217.8 ENSMUST00000190441.2 |
||
| CDS-3UTR CAA 90 bp | TGCTGTAAAAGAGGGCTGAAGGACACCACAGGAGCAGAAAGGGACACTCAGAGAGGTCCGGCCCAGGGCTaGGAAGAGCAGGTCTCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CCKRGLKDTTGAERDTQRGPAQG*EEQVSL Trigger: AAGCGAGACCTGCTCTTCCAAGCCCTGGGCCGGACC...TCTCTGAGTGTCCCTTTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068333.14 ENSMUST00000189529.7 |
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| CDS-3UTR CAA 90 bp | ACAGGTGGAAATGAGGACACGCTGCGACTCCTGCCCTCACCTGCCTCGCCTTCATGTGCACTGCCTTTGTaGCAGAGATATCCAGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: TGGNEDTLRLLPSPASPSCALPL*QRYPGQ Trigger: TTGGCCTGGATATCTCTGCAACAAAGGCAGTGCACA...TGAAGGCGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS-3UTR CAA 90 bp | TGCATAATTCTGTCCAGCAAGCCATGGATGATCTCAAACCCGGGAGTCTTGTTGGGTCCGGCCCAGGGCTaGGAAGAGCAGGTCTCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CIILSSKPWMISNPGVLLGPAQG*EEQVSL Trigger: AAGCGAGACCTGCTCTTCCAAGCCCTGGGCCGGACC...CAACAAGACTCCCGGGTTTGAGATCATCCATGGCTTGCTGGACAGAATTATGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
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| CDS-3UTR CAA 90 bp | TTCCACACTAGTGTAAGCAACGCACGACGGGCTGCCAGCTCCTCACAGGTGGAAAGGAGGTCGTATCTGTaGGCAGGGACGTCAATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FHTSVSNARRAASSSQVERRSYL*AGTSIL Trigger: CAAGATTGACGTCCCTGCCAACAGATACGACCTCCT...TTCCACCTGTGAGGAGCTGGCAGCCCGTCGTGCGTTGCTTACACTAGTGTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS-3UTR CAA 90 bp | AGCAACGCACGACGGGCTGCCAGCTCCTCACAGGTGGAAATGAGGACACGCTGCATATCCAGGCCAAGCTaGTCAGCAATATCTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SNARRAASSSQVEMRTRCISRPS*SAISSW Trigger: CCAAGAAGATATTGCTGACAAGCTTGGCCTGGATAT...GCAGCGTGTCCTCATTTCCACCTGTGAGGAGCTGGCAGCCCGTCGTGCGTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS-3UTR CAA 90 bp | CGACGGGCTGCCAGCTCCTCACAGGTGGAAATGAGGACACGCTGCGACTCCTGCTTCAGAGGCTTGAATTaGATATCTGAAGGACGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RRAASSSQVEMRTRCDSCFRGLN*ISEGRF Trigger: GAAACGTCCTTCAGATATCAAATTCAAGCCTCTGAA...GCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGTGAGGAGCTGGCAGCCCGTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS-3UTR CAA 90 bp | GCTGCCAGCTCCTCACAGGTGGAAATGAGGACACGCTGCGACTCCTGCCCTCACTTATATACCGGAGCTTaGATCCTTTCTTTGAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: AASSSQVEMRTRCDSCPHLYTGA*ILSLKT Trigger: GGTCTTCAAAGAAAGGATCAAAGCTCCGGTATATAA...GTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGTGAGGAGCTGGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS-3UTR CAA 90 bp | TTCCACACTAGTGTAAGCAACGCACGACGGGCTGCCAGCTCCTCACAGGTGGAATGTGATAACCAGCTTTaGGATGTCTCCCTTGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: FHTSVSNARRAASSSQVECDNQL*DVSLGH Trigger: ATGCCCAAGGGAGACATCCAAAAGCTGGTTATCACA...TTCCACCTGTGAGGAGCTGGCAGCCCGTCGTGCGTTGCTTACACTAGTGTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS-3UTR CAA 90 bp | AATGAGGACACGCTGCGACTCCTGCCCTCACCTGCCTCGCCTTCAACACCTTCAGTCAGCAATATCTTCTaGGGAGCACAGAGCAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: NEDTLRLLPSPASPSTPSVSNIF*GAQSKS Trigger: ACTTTTGCTCTGTGCTCCCAAGAAGATATTGCTGAC...TGAAGGTGTTGAAGGCGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS-3UTR CAA 90 bp | TCCTCACAGGTGGAAATGAGGACACGCTGCGACTCCTGCCCTCACCTGCCTCGCTTCGCACCTACATCTTaGCCAGAATCTTTTACTACA | + |
|
Preference number: 5 (lower is better) Translates to: SSQVEMRTRCDSCPHLPRFAPTS*PESFTT Trigger: TGTAGTAAAAGATTCTGGCAAAGATGTAGGTGCGAA...GCGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGTGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS-3UTR CAA 90 bp | GCTGCCAGCTCCTCACAGGTGGAAATGAGGACACGCTGCGACTCCTGCCCTCACAAAAAGGGCTCAATATaGATTTCCAGAGAGGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: AASSSQVEMRTRCDSCPHKKGSI*ISREEQ Trigger: CTGTTCCTCTCTGGAAATCAATATTGAGCCCTTTTT...GTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGTGAGGAGCTGGCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS-3UTR CAA 90 bp | TGCTGTAAAAGAGGGCTGAAGGACACCACAGGAGCAGAAAGGGACACTCAGAGAGCTTTGATCCTTTCTTaGAAGACCTGGAGGCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: CCKRGLKDTTGAERDTQRALILS*KTWRPR Trigger: TCGGGGCCTCCAGGTCTTCAAAGAAAGGATCAAAGC...TCTCTGAGTGTCCCTTTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068333.14 ENSMUST00000189529.7 |
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| CDS-3UTR CAA 90 bp | GGCTGCCAGCTCCTCACAGGTGGAAATGAGGACACGCTGCGACTCCTGCCCTCAGTCTTATTCAGAGGCTaGAATTTGATATCTGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GCQLLTGGNEDTLRLLPSVLFRG*NLISEG Trigger: TCCTTCAGATATCAAATTCAAGCCTCTGAATAAGAC...TGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGTGAGGAGCTGGCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS TCA 90 bp | GTCGTATCTGTTGGCAGGGACGTCAATCTTGTAAAGCACAACATCTaGGGCCCCCTGTGCCTTCCCATGACCTTGTTCCTTGCTTATGAT | + |
|
Preference number: 5 (lower is better) Translates to: VVSVGRDVNLVKHNI*GPLCLPMTLFLAYD Trigger: ATCATAAGCAAGGAACAAGGTCATGGGAAGGCACAGGGGGCCTCAGATGTTGTGCTTTACAAGATTGACGTCCCTGCCAACAGATACGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068333.14 ENSMUST00000170217.8 ENSMUST00000190441.2 |
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| CDS-3UTR CAA 90 bp | GCACAAATGGATATGTGCTGTAAAAGAGGGCTGAAGGACACCACAGGAGCAGAAAGGAGGTCGTATCTGTaGGCAGGGACGTCAATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AQMDMCCKRGLKDTTGAERRSYL*AGTSIL Trigger: CAAGATTGACGTCCCTGCCAACAGATACGACCTCCT...TTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACAGCACATATCCATTTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
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| CDS-3UTR CAA 90 bp | TGCTGTAAAAGAGGGCTGAAGGACACCACAGGAGCAGAAAGGGACACTCAGAGATTTTGGATGTCTCCCTaGGGCATCACTCGCTTATAT | + |
|
Preference number: 5 (lower is better) Translates to: CCKRGLKDTTGAERDTQRFWMSP*GITRLY Trigger: ATATAAGCGAGTGATGCCCAAGGGAGACATCCAAAA...TCTCTGAGTGTCCCTTTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
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| CDS-3UTR CAA 90 bp | TGTAAAAGAGGGCTGAAGGACACCACAGGAGCAGAAAGGGACACTCAGAGACCAATATCCAGGCCAAGCTaGTCAGCAATATCTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CKRGLKDTTGAERDTQRPISRPS*SAISSW Trigger: CCAAGAAGATATTGCTGACAAGCTTGGCCTGGATAT...TGGTCTCTGAGTGTCCCTTTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
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| CDS-3UTR CAA 90 bp | GCACAAATGGATATGTGCTGTAAAAGAGGGCTGAAGGACACCACAGGAGCAGAATGTGCACTGCCTTTGTaGCAGAGATATCCAGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: AQMDMCCKRGLKDTTGAECALPL*QRYPGQ Trigger: TTGGCCTGGATATCTCTGCAACAAAGGCAGTGCACA...TTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACAGCACATATCCATTTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
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| CDS-3UTR CAA 90 bp | CTCCTCCAGGAACTATTAGTGAAGCAAGATGCTGATCTGCCTTGCAGACAGTCCCGGTCTTTAGTGAACTaGATATTCCGGAGAACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLQELLVKQDADLPCRQSRSLVN*IFRRTA Trigger: AGCAGTTCTCCGGAATATCAAGTTCACTAAAGACCG...GGACTGTCTGCAAGGCAGATCAGCATCTTGCTTCACTAATAGTTCCTGGAGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS-3UTR CAA 90 bp | CTATTAGTGAAGCAAGATGCTGATCTGCCTTGCAGACAGTCCACAGCATCCAGTTTTTGGATGTCTCCCTaGGGCATCACTCGCTTATAT | + |
|
Preference number: 5 (lower is better) Translates to: LLVKQDADLPCRQSTASSFWMSP*GITRLY Trigger: ATATAAGCGAGTGATGCCCAAGGGAGACATCCAAAA...ACTGGATGCTGTGGACTGTCTGCAAGGCAGATCAGCATCTTGCTTCACTAATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170217.8 |
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| CDS-3UTR CAA 90 bp | TGCAGCTACGCAAGGAGTCAGATAGCACATTTCACTTTATTAAACATTAACGCAGCTTTGATCCTTTCTTaGAAGACCTGGAGGCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: CSYARSQIAHFTLLNINAALILS*KTWRPR Trigger: TCGGGGCCTCCAGGTCTTCAAAGAAAGGATCAAAGC...TGCGTTAATGTTTAATAAAGTGAAATGTGCTATCTGACTCCTTGCGTAGCTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
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| CDS-3UTR CAA 90 bp | TGCATAATTCTGTCCAGCAAGCCATGGATGATCTCAAACCCGGGAGTCTTGTTGTTATATACCGGAGCTTaGATCCTTTCTTTGAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: CIILSSKPWMISNPGVLLLYTGA*ILSLKT Trigger: GGTCTTCAAAGAAAGGATCAAAGCTCCGGTATATAA...CAACAAGACTCCCGGGTTTGAGATCATCCATGGCTTGCTGGACAGAATTATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189529.7 |
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| CDS-3UTR CAA 90 bp | GCACAAATGGATATGTGCTGTAAAAGAGGGCTGAAGGACACCACAGGAGCAGAATTCAGAGGCTTGAATTaGATATCTGAAGGACGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: AQMDMCCKRGLKDTTGAEFRGLN*ISEGRF Trigger: GAAACGTCCTTCAGATATCAAATTCAAGCCTCTGAA...TTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACAGCACATATCCATTTGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
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| CDS-3UTR CAA 90 bp | GCACAAATGGATATGTGCTGTAAAAGAGGGCTGAAGGACACCACAGGAGCAGAAAAAAAGGGCTCAATATaGATTTCCAGAGAGGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: AQMDMCCKRGLKDTTGAEKKGSI*ISREEQ Trigger: CTGTTCCTCTCTGGAAATCAATATTGAGCCCTTTTT...TTCTGCTCCTGTGGTGTCCTTCAGCCCTCTTTTACAGCACATATCCATTTGTGC 44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
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| CDS-3UTR CAA 90 bp | GCAAGGAGTCAGATAGCACATTTCACTTTATTAAACATTAACGCACAAATGGATTGTGATAACCAGCTTTaGGATGTCTCCCTTGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: ARSQIAHFTLLNINAQMDCDNQL*DVSLGH Trigger: ATGCCCAAGGGAGACATCCAAAAGCTGGTTATCACA...ATCCATTTGTGCGTTAATGTTTAATAAAGTGAAATGTGCTATCTGACTCCTTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
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| CDS-3UTR CAA 90 bp | GCAAGGAGTCAGATAGCACATTTCACTTTATTAAACATTAACGCACAAATGGATCGGTCTTTAGTGAACTaGATATTCCGGAGAACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ARSQIAHFTLLNINAQMDRSLVN*IFRRTA Trigger: AGCAGTTCTCCGGAATATCAAGTTCACTAAAGACCG...ATCCATTTGTGCGTTAATGTTTAATAAAGTGAAATGTGCTATCTGACTCCTTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
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| CDS-3UTR CAA 90 bp | GCAAGGAGTCAGATAGCACATTTCACTTTATTAAACATTAACGCACAAATGGATGTCAGCAATATCTTCTaGGGAGCACAGAGCAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: ARSQIAHFTLLNINAQMDVSNIF*GAQSKS Trigger: ACTTTTGCTCTGTGCTCCCAAGAAGATATTGCTGAC...ATCCATTTGTGCGTTAATGTTTAATAAAGTGAAATGTGCTATCTGACTCCTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
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| CDS-3UTR CAA 90 bp | TGCAGCTACGCAAGGAGTCAGATAGCACATTTCACTTTATTAAACATTAACGCATTCGCACCTACATCTTaGCCAGAATCTTTTACTACA | + |
|
Preference number: 5 (lower is better) Translates to: CSYARSQIAHFTLLNINAFAPTS*PESFTT Trigger: TGTAGTAAAAGATTCTGGCAAAGATGTAGGTGCGAA...TGCGTTAATGTTTAATAAAGTGAAATGTGCTATCTGACTCCTTGCGTAGCTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
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| CDS-3UTR CAA 90 bp | TGCAGCTACGCAAGGAGTCAGATAGCACATTTCACTTTATTAAACATTAACGCAGTCTTATTCAGAGGCTaGAATTTGATATCTGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CSYARSQIAHFTLLNINAVLFRG*NLISEG Trigger: TCCTTCAGATATCAAATTCAAGCCTCTGAATAAGAC...TGCGTTAATGTTTAATAAAGTGAAATGTGCTATCTGACTCCTTGCGTAGCTGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
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| CDS-3UTR CAA 90 bp | GCAAGGAGTCAGATAGCACATTTCACTTTATTAAACATTAACGCACAAATGGATTTATATACCGGAGCTTaGATCCTTTCTTTGAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: ARSQIAHFTLLNINAQMDLYTGA*ILSLKT Trigger: GGTCTTCAAAGAAAGGATCAAAGCTCCGGTATATAA...ATCCATTTGTGCGTTAATGTTTAATAAAGTGAAATGTGCTATCTGACTCCTTGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068333.14 |
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| CDS TCA 72 bp | GTTGGCAGGGACGTCAATCTTGTAAAGCACAACATCTaGGGCCCCCTGTGCCTTCCCATGACCTTGTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: VGRDVNLVKHNI*GPLCLPMTLFL Trigger: AAGGAACAAGGTCATGGGAAGGCACAGGGGGCCTCAGATGTTGTGCTTTACAAGATTGACGTCCCTGCCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068333.14 ENSMUST00000170217.8 ENSMUST00000190441.2 |
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| CDS CCA 72 bp | GAGCCAGTCCTTCCAGACACAGGAGGTCGTATCTGTTaGCAGGGACGTCAATCTTGTAAAGCACAACATCTG | + |
|
Preference number: 6 (lower is better) Translates to: EPVLPDTGGRIC*QGRQSCKAQHL Trigger: CAGATGTTGTGCTTTACAAGATTGACGTCCCTGCCAACAGATACGACCTCCTGTGTCTGGAAGGACTGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068333.14 ENSMUST00000170217.8 ENSMUST00000190441.2 |
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| CDS CAA 72 bp | CCAGATGTCTTAGGGTTCCTGATCCAGGGTGAGGAGTaGGCCTCAGTAGAAAGCATGTTTAGTATGTCACCC | + |
|
Preference number: 6 (lower is better) Translates to: PDVLGFLIQGEE*ASVESMFSMSP Trigger: GGGTGACATACTAAACATGCTTTCTACTGAGGCCAACTCCTCACCCTGGATCAGGAACCCTAAGACATCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190441.2 |
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| CDS CAA 72 bp | CTGTGCCTTCCCATGACCTTGTTCCTTGCTTATGATTaGCTTTTCAGAAGTAATTTCATCAAGTTCCAGACC | + |
|
Preference number: 6 (lower is better) Translates to: LCLPMTLFLAYD*LFRSNFIKFQT Trigger: GGTCTGGAACTTGATGAAATTACTTCTGAAAAGCAAATCATAAGCAAGGAACAAGGTCATGGGAAGGCACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068333.14 ENSMUST00000170217.8 ENSMUST00000190441.2 |
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