Pregenerated sensors for FAR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030303Ensembl transcript IDs: ENSMUST00000032443.14, ENSMUST00000111607.4
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCACAATGGTTGGAAGCTCTTGCCTTGGTACTGAGCATGCTTCCCTaGTTGGTGCTGCCTTTCTCTAGCCTATTTAGACTTCTGCCACGT | + |
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Preference number: 1 (lower is better) Translates to: SQWLEALALVLSMLP*LVLPFSSLFRLLPR Trigger: ACGTGGCAGAAGTCTAAATAGGCTAGAGAAAGGCAGCACCAAGCAGGGAAGCATGCTCAGTACCAAGGCAAGAGCTTCCAACCATTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR TCA 90 bp | CCACTGTACATTATAGAGTTAACTAAGGTGTGTGACTGGGTTAACTaGGGTACAAGGGCCTTGGGTGACCAGGAATGTGCTCCTCCCAAC | + |
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Preference number: 1 (lower is better) Translates to: PLYIIELTKVCDWVN*GTRALGDQECAPPN Trigger: GTTGGGAGGAGCACATTCCTGGTCACCCAAGGCCCTTGTACCTCAGTTAACCCAGTCACACACCTTAGTTAACTCTATAATGTACAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR TCA 90 bp | AGTCTAGGAACGTCACCCTCCCCATCATCCTTTCTGACTGAGGCCTaGGTGAAACACTTAAGTAGAAGGGCTTTGGCAACGTCATTAAGT | + |
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Preference number: 1 (lower is better) Translates to: SLGTSPSPSSFLTEA*VKHLSRRALATSLS Trigger: ACTTAATGACGTTGCCAAAGCCCTTCTACTTAAGTGTTTCACTCAGGCCTCAGTCAGAAAGGATGATGGGGAGGGTGACGTTCCTAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR TCA 90 bp | CACACACACACACAAAGAATAGGGAAGAAGGTGGAATGGCAACTTTaGCTGGAAGCTTGGGAGTGCTTCTTGTTACTTTCTAGCTTAAGA | + |
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Preference number: 1 (lower is better) Translates to: HTHTQRIGKKVEWQL*LEAWECFLLLSSLR Trigger: TCTTAAGCTAGAAAGTAACAAGAAGCACTCCCAAGCTTCCAGTCAAAGTTGCCATTCCACCTTCTTCCCTATTCTTTGTGTGTGTGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR GCA 90 bp | TCTGCCTGGACAGTAGTCACTGACCTTAATCAAATTTGCAGAAACTaGCAGAAAGGGTTTTCCCAACATATTCTTCATGGTTCTGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: SAWTVVTDLNQICRN*QKGFSQHILHGSEE Trigger: CTCCTCAGAACCATGAAGAATATGTTGGGAAAACCCTTTCTGGCAGTTTCTGCAAATTTGATTAAGGTCAGTGACTACTGTCCAGGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR GCA 90 bp | CCTGCAGTCCAGGATGCCCTCATCTCAAATATGAGCAAAACTGAGTaGCATCTTATGGGTATGAGAATTTGTGACTGTTTAAAGGTTTCT | + |
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Preference number: 1 (lower is better) Translates to: PAVQDALISNMSKTE*HLMGMRICDCLKVS Trigger: AGAAACCTTTAAACAGTCACAAATTCTCATACCCATAAGATGGCACTCAGTTTTGCTCATATTTGAGATGAGGGCATCCTGGACTGCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR GCA 90 bp | GTTGAGTTTTCTGCCTGGACAGTAGTCACTGACCTTAATCAAATTTaGAGAAACTGCCAGAAAGGGTTTTCCCAACATATTCTTCATGGT | + |
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Preference number: 1 (lower is better) Translates to: VEFSAWTVVTDLNQI*RNCQKGFSQHILHG Trigger: ACCATGAAGAATATGTTGGGAAAACCCTTTCTGGCAGTTTCTGCAAATTTGATTAAGGTCAGTGACTACTGTCCAGGCAGAAAACTCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR CCA 90 bp | AAAGGAAAAGGAGTGCTTTCATGCTTCCTGTGTGATAGTGTGGAGTaGTGGTGTCAGGATATAATCTGGAAGTTACGTTTCTGTAAATGT | + |
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Preference number: 1 (lower is better) Translates to: KGKGVLSCFLCDSVE*WCQDIIWKLRFCKC Trigger: ACATTTACAGAAACGTAACTTCCAGATTATATCCTGACACCACCACTCCACACTATCACACAGGAAGCATGAAAGCACTCCTTTTCCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR CCA 90 bp | AATTGGAAAATTTATAGTGGAAATAATTTGCTGTCGTTTCAGACTTaGATCCTACAAGCCTGTCCGTTCTGTAAGTGGTACTGCAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: NWKIYSGNNLLSFQT*ILQACPFCKWYCRW Trigger: CCACCTGCAGTACCACTTACAGAACGGACAGGCTTGTAGGATCCAAGTCTGAAACGACAGCAAATTATTTCCACTATAAATTTTCCAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
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| 3UTR GCA 90 bp | GCAGGCATGTTACATGGAATTGGAAAATTTATAGTGGAAATAATTTaGTGTCGTTTCAGACTTGGATCCTACAAGCCTGTCCGTTCTGTA | + |
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Preference number: 1 (lower is better) Translates to: AGMLHGIGKFIVEII*CRFRLGSYKPVRSV Trigger: TACAGAACGGACAGGCTTGTAGGATCCAAGTCTGAAACGACAGCAAATTATTTCCACTATAAATTTTCCAATTCCATGTAACATGCCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
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| 3UTR GCA 90 bp | ATGGCCACACTTCAGCCATCAGAATGTAAGCATACACATGTTAGCTaGTTGTGTGCAATTTTCAGTGATTTGTGTGGACTTTACTTTTAT | + |
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Preference number: 1 (lower is better) Translates to: MATLQPSECKHTHVS*LCAIFSDLCGLYFY Trigger: ATAAAAGTAAAGTCCACACAAATCACTGAAAATTGCACACAAGCAGCTAACATGTGTATGCTTACATTCTGATGGCTGAAGTGTGGCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR-3UTR GCA 90 bp | TTTGCTTCCCTCACTGGTAAAGGTCAGGAGGGTTTTCATGGTTCGAGTCTAGGAGCAATCCTACACGCATaGGCACGCGCGCACGCGCAC | + |
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Preference number: 2 (lower is better) Translates to: FASLTGKGQEGFHGSSLGAILHA*ARAHAH Trigger: GTGCGCGTGCGCGCGTGCGCATGCGTGTAGGATTGC...TCCTAGACTCGAACCATGAAAACCCTCCTGACCTTTACCAGTGAGGGAAGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR-3UTR CCA 90 bp | TCCTGTAGAGTGGAACTAACACTCTCGTCTTGCCTTCCTTCCCCTCTCAGGTCCAAAGGAAACAGGGACTaGCCCTGTGTTACAGCCATA | + |
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Preference number: 2 (lower is better) Translates to: SCRVELTLSSCLPSPLRSKGNRD*PCVTAI Trigger: TATGGCTGTAACACAGGGCCAGTCCCTGTTTCCTTT...GGACCTGAGAGGGGAAGGAAGGCAAGACGAGAGTGTTAGTTCCACTCTACAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
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| 3UTR-3UTR GCA 90 bp | AGGTCAGGAGGGTTTTCATGGTTCGAGTCTAGGAACGTCACCCTCCCCATCATCCACAAGACTCCCTGGTaGATGTATGATTGTGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: RSGGFSWFESRNVTLPIIHKTPW*MYDCVL Trigger: GAGAACACAATCATACATGCACCAGGGAGTCTTGTG...GATGATGGGGAGGGTGACGTTCCTAGACTCGAACCATGAAAACCCTCCTGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR-3UTR CCA 90 bp | CTCTCAGGTCCCCTTTGCGGATGGCCACACAGACAACCACTTACCTCTTTTAGAAATTATGCAGCTAACTaGAGAGTCAGCCCAGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: LSGPLCGWPHRQPLTSFRNYAAN*RVSPAN Trigger: GTTGGCTGGGCTGACTCTCCAGTTAGCTGCATAATT...TCTAAAAGAGGTAAGTGGTTGTCTGTGTGGCCATCCGCAAAGGGGACCTGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
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| 3UTR-3UTR GCA 90 bp | CTGTTAGTCTCTTCCTGCCTGTTGAGTTCCTATTACTGTATCCTTAGCTGGTGTGTGAGGAGGTTGAGCTaGGCAGTTCACAATGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: LLVSSCLLSSYYCILSWCVRRLS*AVHNGW Trigger: CCAACCATTGTGAACTGCGCAGCTCAACCTCCTCAC...ACACCAGCTAAGGATACAGTAATAGGAACTCAACAGGCAGGAAGAGACTAACAG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR-3UTR TCA 90 bp | TCCTGTAGAGTGGAACTAACACTCTCGTCTTGCCTTCCTTCCCCTCTCAGGTCCAATATTAAGCCATATTaGCAAGATGGTGTTGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: SCRVELTLSSCLPSPLRSNIKPY*QDGVVQ Trigger: CTGGACAACACCATCTTGTCAATATGGCTTAATATT...GGACCTGAGAGGGGAAGGAAGGCAAGACGAGAGTGTTAGTTCCACTCTACAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
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| 3UTR-3UTR GCA 90 bp | CTTGTGTTGTATTGTGAGGAGGTTGAGCTGCGCAGTTCACAATGGTTGGAAGCTCTGGAAGCTTGGGAGTaGTTCTTGTTACTTTCTAGC | + |
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Preference number: 2 (lower is better) Translates to: LVLYCEEVELRSSQWLEALEAWE*FLLLSS Trigger: GCTAGAAAGTAACAAGAAGCACTCCCAAGCTTCCAG...AGCTTCCAACCATTGTGAACTGCGCAGCTCAACCTCCTCACAATACAACACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR-3UTR TCA 90 bp | GTCCAGGATGCCCTCATCTCAAATATGAGCAAAACTGAGTGCCATCTTATGGGTTCCCTGGTGCATGTATaGTTGTGTTCTCATTTGGTG | + |
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Preference number: 2 (lower is better) Translates to: VQDALISNMSKTECHLMGSLVHV*LCSHLV Trigger: CACCAAATGAGAACACAATCATACATGCACCAGGGA...ACCCATAAGATGGCACTCAGTTTTGCTCATATTTGAGATGAGGGCATCCTGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR-3UTR TCA 90 bp | GTCCAGGATGCCCTCATCTCAAATATGAGCAAAACTGAGTGCCATCTTATGGGTATCATCCTTTCTGACTaGGGCCTGAGTGAAACACTT | + |
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Preference number: 2 (lower is better) Translates to: VQDALISNMSKTECHLMGIILSD*GLSETL Trigger: AAGTGTTTCACTCAGGCCTCAGTCAGAAAGGATGAT...ACCCATAAGATGGCACTCAGTTTTGCTCATATTTGAGATGAGGGCATCCTGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR-3UTR CCA 90 bp | CTGTTAGTCTCTTCCTGCCTGTTGAGTTCCTATTACTGTATCCTTAGCTGGTGTTCCTGTGTGATAGTGTaGAGTGGTGGTGTCAGGATA | + |
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Preference number: 2 (lower is better) Translates to: LLVSSCLLSSYYCILSWCSCVIV*SGGVRI Trigger: TATCCTGACACCACCACTCCACACTATCACACAGGA...ACACCAGCTAAGGATACAGTAATAGGAACTCAACAGGCAGGAAGAGACTAACAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR-3UTR TCA 90 bp | TTTGCTTCCCTCACTGGTAAAGGTCAGGAGGGTTTTCATGGTTCGAGTCTAGGAAGTAAGAAGAGGACTTaGAGCTTTCAGAACAATGGT | + |
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Preference number: 2 (lower is better) Translates to: FASLTGKGQEGFHGSSLGSKKRT*SFQNNG Trigger: ACCATTGTTCTGAAAGCTTCAAGTCCTCTTCTTACT...TCCTAGACTCGAACCATGAAAACCCTCCTGACCTTTACCAGTGAGGGAAGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR-3UTR GCA 90 bp | CTGTTAGTCTCTTCCTGCCTGTTGAGTTCCTATTACTGTATCCTTAGCTGGTGTTTCCCTGCTTGGTGCTaGCTTTCTCTAGCCTATTTA | + |
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Preference number: 2 (lower is better) Translates to: LLVSSCLLSSYYCILSWCFPAWC*LSLAYL Trigger: TAAATAGGCTAGAGAAAGGCAGCACCAAGCAGGGAA...ACACCAGCTAAGGATACAGTAATAGGAACTCAACAGGCAGGAAGAGACTAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR-3UTR GCA 90 bp | ACGGCTTGGCTTCATTCCTTTTGTGGTCTAACCCTCTACAGTTGGTACAGCTTTTCTGATGAAGGTCACTaGATTCCTTTGAACTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: TAWLHSFCGLTLYSWYSFSDEGH*IPLNSS Trigger: ACTGGAGTTCAAAGGAATGCAGTGACCTTCATCAGA...AAAGCTGTACCAACTGTAGAGGGTTAGACCACAAAAGGAATGAAGCCAAGCCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
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| 3UTR-3UTR GCA 90 bp | GTTTGTAAGTGTATTGTAGAGTTAAACAAGAAAATGCCCAGGAAGCATCACAGACTCTCAGGTCCCCTTTaGGGATGGCCACACAGACAA | + |
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Preference number: 2 (lower is better) Translates to: VCKCIVELNKKMPRKHHRLSGPL*GWPHRQ Trigger: TTGTCTGTGTGGCCATCCGCAAAGGGGACCTGAGAG...TCTGTGATGCTTCCTGGGCATTTTCTTGTTTAACTCTACAATACACTTACAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
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| 3UTR-3UTR GCA 90 bp | GTGCTGCCTTTCTCTAGCCTATTTAGACTTCTGCCACGTGTTCTTCCATCTTTAAAAGGAGTGCTTTCATaGTTCCTGTGTGATAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: VLPFSSLFRLLPRVLPSLKGVLS*FLCDSV Trigger: CACACTATCACACAGGAAGCATGAAAGCACTCCTTT...TAAAGATGGAAGAACACGTGGCAGAAGTCTAAATAGGCTAGAGAAAGGCAGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR-3UTR GCA 90 bp | ACGGCTTGGCTTCATTCCTTTTGTGGTCTAACCCTCTACAGTTGGTACAGCTTTAAGGGCATTGATAAATaGAAATGTGTGCGTCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: TAWLHSFCGLTLYSWYSFKGIDK*KCVRPL Trigger: CAAAGGACGCACACATTTGCATTTATCAATGCCCTT...AAAGCTGTACCAACTGTAGAGGGTTAGACCACAAAAGGAATGAAGCCAAGCCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
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| 3UTR-3UTR TCA 90 bp | GATGGACGTCAACCCGAGTTTAAAGAAAAGGGCATTGATAAATGCAAATGTGTGGTCACTGCATTCCTTTaGACTCCAGTTGCTGACTTT | + |
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Preference number: 2 (lower is better) Translates to: DGRQPEFKEKGIDKCKCVVTAFL*TPVADF Trigger: AAAGTCAGCAACTGGAGTTCAAAGGAATGCAGTGAC...CACACATTTGCATTTATCAATGCCCTTTTCTTTAAACTCGGGTTGACGTCCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
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| 3UTR-3UTR TCA 90 bp | GGTAAGCCACATACATCCTGTGTATTAATTACAGACAGAGCTAGAACAGAATCTTTGGGAGCTTCATCTTaGGCCATTGGTTACTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: GKPHTSCVLITDRARTESLGASS*AIGYSK Trigger: CTTGGAGTAACCAATGGCTCAAGATGAAGCTCCCAA...AGATTCTGTTCTAGCTCTGTCTGTAATTAATACACAGGATGTATGTGGCTTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
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| 3UTR CAA 90 bp | TATTACTGTATCCTTAGCTGGTGTCTTTCATGTAACTCACAAGTCTaGCAGATGTCTCACATAGGGAAACCCACAGGTACTTTATTTCAG | + |
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Preference number: 2 (lower is better) Translates to: YYCILSWCLSCNSQV*QMSHIGKPTGTLFQ Trigger: CTGAAATAAAGTACCTGTGGGTTTCCCTATGTGAGACATCTGCAAGACTTGTGAGTTACATGAAAGACACCAGCTAAGGATACAGTAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR-3UTR TCA 90 bp | GGTAAGCCACATACATCCTGTGTATTAATTACAGACAGAGCTAGAACAGAATCTGACTTTCCTGACTGTTaGAGGTTGAGCCTTAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: GKPHTSCVLITDRARTESDFPDC*RLSLRK Trigger: TTTTCTAAGGCTCAACCTTCAACAGTCAGGAAAGTC...AGATTCTGTTCTAGCTCTGTCTGTAATTAATACACAGGATGTATGTGGCTTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
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| 3UTR-3UTR CCA 90 bp | GATGGACGTCAACCCGAGTTTAAAGAAAAGGGCATTGATAAATGCAAATGTGTGTGTAATCAGCTCACATaGTTAATAAAGGAAACAGGG | + |
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Preference number: 2 (lower is better) Translates to: DGRQPEFKEKGIDKCKCVCNQLT*LIKETG Trigger: CCCTGTTTCCTTTATTAACCATGTGAGCTGATTACA...CACACATTTGCATTTATCAATGCCCTTTTCTTTAAACTCGGGTTGACGTCCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
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| 3UTR-3UTR GCA 90 bp | ACTGACCTTAATCAAATTTGCAGAAACTGCCAGAAAGGGTTTTCCCAACATATTATAAAGGAAAAGGAGTaGTTTCATGCTTCCTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: TDLNQICRNCQKGFSQHIIKEKE*FHASCV Trigger: CACACAGGAAGCATGAAAGCACTCCTTTTCCTTTAT...AATATGTTGGGAAAACCCTTTCTGGCAGTTTCTGCAAATTTGATTAAGGTCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR-3UTR CCA 90 bp | GTTTGTAAGTGTATTGTAGAGTTAAACAAGAAAATGCCCAGGAAGCATCACAGAAGCAAACAGACAATATaGAAAGCAGATCCTAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: VCKCIVELNKKMPRKHHRSKQTI*KADPRG Trigger: TCCTCTAGGATCTGCTTTCCATATTGTCTGTTTGCT...TCTGTGATGCTTCCTGGGCATTTTCTTGTTTAACTCTACAATACACTTACAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
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| 3UTR-3UTR CCA 90 bp | GTTTGTAAGTGTATTGTAGAGTTAAACAAGAAAATGCCCAGGAAGCATCACAGATTAGTACCTTGTGGGTaGAGAAAAACTTTTTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: VCKCIVELNKKMPRKHHRLVPCG*RKTFCL Trigger: CAGGCAAAAAGTTTTTCTCCACCCACAAGGTACTAA...TCTGTGATGCTTCCTGGGCATTTTCTTGTTTAACTCTACAATACACTTACAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
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| 3UTR-3UTR TCA 90 bp | ACTGACCTTAATCAAATTTGCAGAAACTGCCAGAAAGGGTTTTCCCAACATATTGTGTGCAATTTTCAGTaGTTTGTGTGGACTTTACTT | + |
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Preference number: 2 (lower is better) Translates to: TDLNQICRNCQKGFSQHIVCNFQ*FVWTLL Trigger: AAGTAAAGTCCACACAAATCACTGAAAATTGCACAC...AATATGTTGGGAAAACCCTTTCTGGCAGTTTCTGCAAATTTGATTAAGGTCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR-3UTR CAA 90 bp | GAGGAGGTTGAGCTGCGCAGTTCACAATGGTTGGAAGCTCTTGCCTTGGTACTGAGCATGCTTCCCTGCTaGGTGCTGCCTTTCTCTAGC | + |
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Preference number: 3 (lower is better) Translates to: EEVELRSSQWLEALALVLSMLPC*VLPFSS Trigger: GCTAGAGAAAGGCAGCACCAAGCAGGGAAGCATGCT...CAGTACCAAGGCAAGAGCTTCCAACCATTGTGAACTGCGCAGCTCAACCTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR GCA 72 bp | GAGACATCCTGTAGAGTGGAACTAACACTCTCGTCTTaGCTTCCTTCCCCTCTCAGGTCCCCTTTGCGGATG | + |
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Preference number: 3 (lower is better) Translates to: ETSCRVELTLSS*LPSPLRSPLRM Trigger: CATCCGCAAAGGGGACCTGAGAGGGGAAGGAAGGCAAGACGAGAGTGTTAGTTCCACTCTACAGGATGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
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| 3UTR-3UTR CAA 90 bp | GAGGAGGTTGAGCTGCGCAGTTCACAATGGTTGGAAGCTCTTGCCTTGGTACTGGGTGGAATGGCAACTTaGACTGGAAGCTTGGGAGTG | + |
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Preference number: 3 (lower is better) Translates to: EEVELRSSQWLEALALVLGGMAT*TGSLGV Trigger: CACTCCCAAGCTTCCAGTCAAAGTTGCCATTCCACC...CAGTACCAAGGCAAGAGCTTCCAACCATTGTGAACTGCGCAGCTCAACCTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR CCA 72 bp | GAGTACCTTGAGCCTCAGAGGCAGCCACAGACGGCTTaGCTTCATTCCTTTTGTGGTCTAACCCTCTACAGT | + |
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Preference number: 3 (lower is better) Translates to: EYLEPQRQPQTA*LHSFCGLTLYS Trigger: ACTGTAGAGGGTTAGACCACAAAAGGAATGAAGCCAAGCCGTCTGTGGCTGCCTCTGAGGCTCAAGGTACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
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| 3UTR TCA 72 bp | ACGTCACCCTCCCCATCATCCTTTCTGACTGAGGCCTaGGTGAAACACTTAAGTAGAAGGGCTTTGGCAACG | + |
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Preference number: 3 (lower is better) Translates to: TSPSPSSFLTEA*VKHLSRRALAT Trigger: CGTTGCCAAAGCCCTTCTACTTAAGTGTTTCACTCAGGCCTCAGTCAGAAAGGATGATGGGGAGGGTGACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR GCA 72 bp | GAAGGCTACTTGTGTTGTATTGTGAGGAGGTTGAGCTaGGCAGTTCACAATGGTTGGAAGCTCTTGCCTTGG | + |
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Preference number: 3 (lower is better) Translates to: EGYLCCIVRRLS*AVHNGWKLLPW Trigger: CCAAGGCAAGAGCTTCCAACCATTGTGAACTGCGCAGCTCAACCTCCTCACAATACAACACAAGTAGCCTTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR TCA 72 bp | CCAGAAAGGGTTTTCCCAACATATTCTTCATGGTTCTaGGGAGACCTCCGTAATGGCCACACTTCAGCCATC | + |
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Preference number: 3 (lower is better) Translates to: PERVFPTYSSWF*GDLRNGHTSAI Trigger: GATGGCTGAAGTGTGGCCATTACGGAGGTCTCCTCAGAACCATGAAGAATATGTTGGGAAAACCCTTTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR GCA 72 bp | TTGGAAGCTCTTGCCTTGGTACTGAGCATGCTTCCCTaGTTGGTGCTGCCTTTCTCTAGCCTATTTAGACTT | + |
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Preference number: 3 (lower is better) Translates to: LEALALVLSMLP*LVLPFSSLFRL Trigger: AAGTCTAAATAGGCTAGAGAAAGGCAGCACCAAGCAGGGAAGCATGCTCAGTACCAAGGCAAGAGCTTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR-3UTR CAA 90 bp | TTCAGACTTGGATCCTACAAGCCTGTCCGTTCTGTAAGTGGTACTGCAGGTGGTTCCTTTGAACTCCAGTaGCTGACTTTCCTGACTGTT | + |
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Preference number: 3 (lower is better) Translates to: FRLGSYKPVRSVSGTAGGSFELQ*LTFLTV Trigger: AACAGTCAGGAAAGTCAGCAACTGGAGTTCAAAGGA...ACCACCTGCAGTACCACTTACAGAACGGACAGGCTTGTAGGATCCAAGTCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
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| 3UTR-3UTR CAA 90 bp | CTGTTAGTCTCTTCCTGCCTGTTGAGTTCCTATTACTGTATCCTTAGCTGGTGTTGTATTGTGAGGAGGTaGAGCTGCGCAGTTCACAAT | + |
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Preference number: 3 (lower is better) Translates to: LLVSSCLLSSYYCILSWCCIVRR*SCAVHN Trigger: ATTGTGAACTGCGCAGCTCAACCTCCTCACAATACA...ACACCAGCTAAGGATACAGTAATAGGAACTCAACAGGCAGGAAGAGACTAACAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| 3UTR TCA 72 bp | ATTATAGAGTTAACTAAGGTGTGTGACTGGGTTAACTaGGGTACAAGGGCCTTGGGTGACCAGGAATGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: IIELTKVCDWVN*GTRALGDQECA Trigger: AGCACATTCCTGGTCACCCAAGGCCCTTGTACCTCAGTTAACCCAGTCACACACCTTAGTTAACTCTATAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| 3UTR TCA 72 bp | ACACAAAGAATAGGGAAGAAGGTGGAATGGCAACTTTaGCTGGAAGCTTGGGAGTGCTTCTTGTTACTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TQRIGKKVEWQL*LEAWECFLLLS Trigger: AGAAAGTAACAAGAAGCACTCCCAAGCTTCCAGTCAAAGTTGCCATTCCACCTTCTTCCCTATTCTTTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| 3UTR-3UTR CAA 90 bp | ACGGCTTGGCTTCATTCCTTTTGTGGTCTAACCCTCTACAGTTGGTACAGCTTTGTCGTCTTGTATATGTaGTGTCTGTTACAAATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: TAWLHSFCGLTLYSWYSFVVLYM*CLLQMS Trigger: TGACATTTGTAACAGACACAACATATACAAGACGAC...AAAGCTGTACCAACTGTAGAGGGTTAGACCACAAAAGGAATGAAGCCAAGCCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| 3UTR GCA 72 bp | TCTGCCTGGACAGTAGTCACTGACCTTAATCAAATTTaGAGAAACTGCCAGAAAGGGTTTTCCCAACATATT | + |
|
Preference number: 3 (lower is better) Translates to: SAWTVVTDLNQI*RNCQKGFSQHI Trigger: AATATGTTGGGAAAACCCTTTCTGGCAGTTTCTGCAAATTTGATTAAGGTCAGTGACTACTGTCCAGGCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| 3UTR GCA 72 bp | CAGGATGCCCTCATCTCAAATATGAGCAAAACTGAGTaGCATCTTATGGGTATGAGAATTTGTGACTGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: QDALISNMSKTE*HLMGMRICDCL Trigger: TAAACAGTCACAAATTCTCATACCCATAAGATGGCACTCAGTTTTGCTCATATTTGAGATGAGGGCATCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| 3UTR GCA 72 bp | CTTCAGCCATCAGAATGTAAGCATACACATGTTAGCTaGTTGTGTGCAATTTTCAGTGATTTGTGTGGACTT | + |
|
Preference number: 3 (lower is better) Translates to: LQPSECKHTHVS*LCAIFSDLCGL Trigger: AAGTCCACACAAATCACTGAAAATTGCACACAAGCAGCTAACATGTGTATGCTTACATTCTGATGGCTGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| 3UTR CCA 72 bp | CCACAGGTACTTTATTTCAGAGTTGAGTTTTCTGCCTaGACAGTAGTCACTGACCTTAATCAAATTTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: PQVLYFRVEFSA*TVVTDLNQICR Trigger: TCTGCAAATTTGATTAAGGTCAGTGACTACTGTCCAGGCAGAAAACTCAACTCTGAAATAAAGTACCTGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| 3UTR CCA 72 bp | ATTTATAGTGGAAATAATTTGCTGTCGTTTCAGACTTaGATCCTACAAGCCTGTCCGTTCTGTAAGTGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: IYSGNNLLSFQT*ILQACPFCKWY Trigger: GTACCACTTACAGAACGGACAGGCTTGTAGGATCCAAGTCTGAAACGACAGCAAATTATTTCCACTATAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| 3UTR-3UTR CAA 90 bp | ACTGACCTTAATCAAATTTGCAGAAACTGCCAGAAAGGGTTTTCCCAACATATTGCTTGGGAGTGCTTCTaGTTACTTTCTAGCTTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: TDLNQICRNCQKGFSQHIAWECF*LLSSLR Trigger: TCTTAAGCTAGAAAGTAACAAGAAGCACTCCCAAGC...AATATGTTGGGAAAACCCTTTCTGGCAGTTTCTGCAAATTTGATTAAGGTCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| 3UTR GCA 72 bp | ACAGTAGTCACTGACCTTAATCAAATTTGCAGAAACTaGCAGAAAGGGTTTTCCCAACATATTCTTCATGGT | + |
|
Preference number: 3 (lower is better) Translates to: TVVTDLNQICRN*QKGFSQHILHG Trigger: ACCATGAAGAATATGTTGGGAAAACCCTTTCTGGCAGTTTCTGCAAATTTGATTAAGGTCAGTGACTACTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| 3UTR CCA 72 bp | CCAAATCATGTTATAAGTGAAGTACACAAGACTCCCTaGTGCATGTATGATTGTGTTCTCATTTGGTGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: PNHVISEVHKTP*CMYDCVLIWCV Trigger: TACACACCAAATGAGAACACAATCATACATGCACCAGGGAGTCTTGTGTACTTCACTTATAACATGATTTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| 3UTR TCA 72 bp | AACTCAGTCGCTGGAGATCTTGGATTGATGATACAATaGTCAAAAGGTAGTAAATCTTTAGAACTGTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: NSVAGDLGLMIQ*SKGSKSLELSC Trigger: ACAGGACAGTTCTAAAGATTTACTACCTTTTGATCATTGTATCATCAATCCAAGATCTCCAGCGACTGAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| 3UTR TCA 72 bp | TTTTGTGGTCTAACCCTCTACAGTTGGTACAGCTTTTaGTTCTCACATAGCAATTTCAAAGGCAACTTAATG | + |
|
Preference number: 3 (lower is better) Translates to: FCGLTLYSWYSF*FSHSNFKGNLM Trigger: CATTAAGTTGCCTTTGAAATTGCTATGTGAGAATCAAAAGCTGTACCAACTGTAGAGGGTTAGACCACAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR CCA 90 bp | TGCCTTCCTTCCCCTCTCAGGTCCCCTTTGCGGATGGCCACACAGACAACCACTATTAGCAGGAGCTGCTaGGTGGCCGTGACGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLPSPLRSPLRMATQTTTISRSC*VAVTFS Trigger: GCTGAACGTCACGGCCACCCAGCAGCTCCTGCTAAT...AGTGGTTGTCTGTGTGGCCATCCGCAAAGGGGACCTGAGAGGGGAAGGAAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR GCA 90 bp | GAGTCAGCCCAGCCAACAGTGCCAGGTGAAGACAGCACCTCTGATGCCTCCCAGAGGTTTCCGCTCTCTTaGTGCACTACTATCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ESAQPTVPGEDSTSDASQRFPLS*CTTISP Trigger: GGGAGAGATAGTAGTGCAGCAAGAGAGCGGAAACCT...CTGGGAGGCATCAGAGGTGCTGTCTTCACCTGGCACTGTTGGCTGGGCTGACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR GCA 90 bp | GAGTCAGCCCAGCCAACAGTGCCAGGTGAAGACAGCACCTCTGATGCCTCCCAGAGCCTTCTTAGGTGTTaGTTTGCTTTGGGGATACCG | + |
|
Preference number: 4 (lower is better) Translates to: ESAQPTVPGEDSTSDASQSLLRC*FALGIP Trigger: CGGTATCCCCAAAGCAAAGCAACACCTAAGAAGGCT...CTGGGAGGCATCAGAGGTGCTGTCTTCACCTGGCACTGTTGGCTGGGCTGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| 3UTR CAA 72 bp | CTCTCGTCTTGCCTTCCTTCCCCTCTCAGGTCCCCTTaGCGGATGGCCACACAGACAACCACTTACCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSSCLPSPLRSP*RMATQTTTYLF Trigger: AAAGAGGTAAGTGGTTGTCTGTGTGGCCATCCGCAAAGGGGACCTGAGAGGGGAAGGAAGGCAAGACGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR TCA 90 bp | GCCTCAGAGGCAGCCACAGACGGCTTGGCTTCATTCCTTTTGTGGTCTAACCCTGGAATAACTTCTCCATaGGCACCTTGCCCAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASEAATDGLASFLLWSNPGITSP*APCPGS Trigger: GCTTCCTGGGCAAGGTGCTCATGGAGAAGTTATTCC...AGGGTTAGACCACAAAAGGAATGAAGCCAAGCCGTCTGTGGCTGCCTCTGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR GCA 90 bp | TCTTGCCTTCCTTCCCCTCTCAGGTCCCCTTTGCGGATGGCCACACAGACAACCTTTCCGCTCTCTTGCTaGACTACTATCTCTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SCLPSPLRSPLRMATQTTFPLSC*TTISPK Trigger: CTTGGGAGAGATAGTAGTGCAGCAAGAGAGCGGAAA...GGTTGTCTGTGTGGCCATCCGCAAAGGGGACCTGAGAGGGGAAGGAAGGCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR GCA 90 bp | GGGTTTTCATGGTTCGAGTCTAGGAACGTCACCCTCCCCATCATCCTTTCTGACAGGCTCCTGCCAGGTTaGTCCCACTATGGATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GFSWFESRNVTLPIILSDRLLPG*SHYGWP Trigger: AGGCCATCCATAGTGGGAGCAACCTGGCAGGAGCCT...GTCAGAAAGGATGATGGGGAGGGTGACGTTCCTAGACTCGAACCATGAAAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR GCA 90 bp | TGCCTTCCTTCCCCTCTCAGGTCCCCTTTGCGGATGGCCACACAGACAACCACTTCTCCGTGTTGTTTGTaGTCCATTCCCAACTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLPSPLRSPLRMATQTTTSPCCL*SIPNCG Trigger: ACCACAGTTGGGAATGGAGCACAAACAACACGGAGA...AGTGGTTGTCTGTGTGGCCATCCGCAAAGGGGACCTGAGAGGGGAAGGAAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR CCA 90 bp | GGGTTTTCATGGTTCGAGTCTAGGAACGTCACCCTCCCCATCATCCTTTCTGACATTAGCAGGAGCTGCTaGGTGGCCGTGACGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GFSWFESRNVTLPIILSDISRSC*VAVTFS Trigger: GCTGAACGTCACGGCCACCCAGCAGCTCCTGCTAAT...GTCAGAAAGGATGATGGGGAGGGTGACGTTCCTAGACTCGAACCATGAAAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR CCA 90 bp | GAGGAGGTTGAGCTGCGCAGTTCACAATGGTTGGAAGCTCTTGCCTTGGTACTGGCTTTGGCATCTGGCTaGCCATTAGCAGGAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EEVELRSSQWLEALALVLALASG*PLAGAA Trigger: AGCAGCTCCTGCTAATGGCCAGCCAGATGCCAAAGC...CAGTACCAAGGCAAGAGCTTCCAACCATTGTGAACTGCGCAGCTCAACCTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR GCA 90 bp | GAGGAGGTTGAGCTGCGCAGTTCACAATGGTTGGAAGCTCTTGCCTTGGTACTGAACTGGAATCACATCTaGCACTGCCATGGGAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: EEVELRSSQWLEALALVLNWNHI*HCHGSR Trigger: GCGACTCCCATGGCAGTGGCAGATGTGATTCCAGTT...CAGTACCAAGGCAAGAGCTTCCAACCATTGTGAACTGCGCAGCTCAACCTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR GCA 90 bp | GTCCAGGATGCCCTCATCTCAAATATGAGCAAAACTGAGTGCCATCTTATGGGTGCCATTAGCAGGAGCTaGTGGGTGGCCGTGACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VQDALISNMSKTECHLMGAISRS*WVAVTF Trigger: GAACGTCACGGCCACCCAGCAGCTCCTGCTAATGGC...ACCCATAAGATGGCACTCAGTTTTGCTCATATTTGAGATGAGGGCATCCTGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR GCA 90 bp | CAGTGCCAGGTGAAGACAGCACCTCTGATGCCTCCCAGCAAACAGACAATATGGCAATGTGGCTCAGGTTaGAGTTGGAAAAGGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QCQVKTAPLMPPSKQTIWQCGSG*SWKRQW Trigger: CCACTGCCTTTTCCAACTGCAACCTGAGCCACATTG...CCATATTGTCTGTTTGCTGGGAGGCATCAGAGGTGCTGTCTTCACCTGGCACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR CCA 90 bp | GCCTCAGAGGCAGCCACAGACGGCTTGGCTTCATTCCTTTTGTGGTCTAACCCTGTGTCTGTCCAGACTTaGGTCTCACGAGGATGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: ASEAATDGLASFLLWSNPVSVQT*VSRGCK Trigger: TTTACATCCTCGTGAGACCCAAGTCTGGACAGACAC...AGGGTTAGACCACAAAAGGAATGAAGCCAAGCCGTCTGTGGCTGCCTCTGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR CCA 90 bp | AGGTCAGGAGGGTTTTCATGGTTCGAGTCTAGGAACGTCACCCTCCCCATCATCGGCTCAGGTTGCAGTTaGAAAAGGCAGTGGAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: RSGGFSWFESRNVTLPIIGSGCS*KRQWRC Trigger: ACATCTCCACTGCCTTTTCCAACTGCAACCTGAGCC...GATGATGGGGAGGGTGACGTTCCTAGACTCGAACCATGAAAACCCTCCTGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR CCA 90 bp | TCCTGTAGAGTGGAACTAACACTCTCGTCTTGCCTTCCTTCCCCTCTCAGGTCCGGCTCAGGTTGCAGTTaGAAAAGGCAGTGGAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: SCRVELTLSSCLPSPLRSGSGCS*KRQWRC Trigger: ACATCTCCACTGCCTTTTCCAACTGCAACCTGAGCC...GGACCTGAGAGGGGAAGGAAGGCAAGACGAGAGTGTTAGTTCCACTCTACAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR CCA 90 bp | CAGTGCCAGGTGAAGACAGCACCTCTGATGCCTCCCAGCAAACAGACAATATGGTGGCTCCACAGGGCATaGGTAGATGACCTCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QCQVKTAPLMPPSKQTIWWLHRA*VDDLIN Trigger: ATTGATGAGGTCATCTACCCATGCCCTGTGGAGCCA...CCATATTGTCTGTTTGCTGGGAGGCATCAGAGGTGCTGTCTTCACCTGGCACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR CCA 90 bp | TCTTGCCTTCCTTCCCCTCTCAGGTCCCCTTTGCGGATGGCCACACAGACAACCAAGTTGAATACTCTCTaGTCTTCAGGACTGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SCLPSPLRSPLRMATQTTKLNTL*SSGLSS Trigger: AGAGCTCAGTCCTGAAGACCAGAGAGTATTCAACTT...GGTTGTCTGTGTGGCCATCCGCAAAGGGGACCTGAGAGGGGAAGGAAGGCAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR CCA 90 bp | CTCTCAGGTCCCCTTTGCGGATGGCCACACAGACAACCACTTACCTCTTTTAGAGGTGTTGCTTTGCTTTaGGGATACCGGCCAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSGPLCGWPHRQPLTSFRGVALL*GYRPDP Trigger: AGGATCTGGCCGGTATCCCCAAAGCAAAGCAACACC...TCTAAAAGAGGTAAGTGGTTGTCTGTGTGGCCATCCGCAAAGGGGACCTGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR TCA 90 bp | TCTTGCCTTCCTTCCCCTCTCAGGTCCCCTTTGCGGATGGCCACACAGACAACCTTGGACAGACTTCTTTaGCTTTCTCAAACAGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SCLPSPLRSPLRMATQTTLDRLL*LSQTAY Trigger: GTAAGCTGTTTGAGAAAGTCAAAGAAGTCTGTCCAA...GGTTGTCTGTGTGGCCATCCGCAAAGGGGACCTGAGAGGGGAAGGAAGGCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR GCA 90 bp | AGGTCAGGAGGGTTTTCATGGTTCGAGTCTAGGAACGTCACCCTCCCCATCATCTCTCCGTGTTGTTTGTaGTCCATTCCCAACTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSGGFSWFESRNVTLPIISPCCL*SIPNCG Trigger: ACCACAGTTGGGAATGGAGCACAAACAACACGGAGA...GATGATGGGGAGGGTGACGTTCCTAGACTCGAACCATGAAAACCCTCCTGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| 3UTR CAA 72 bp | TATTGTGAGGAGGTTGAGCTGCGCAGTTCACAATGGTaGGAAGCTCTTGCCTTGGTACTGAGCATGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: YCEEVELRSSQW*EALALVLSMLP Trigger: GGGAAGCATGCTCAGTACCAAGGCAAGAGCTTCCAACCATTGTGAACTGCGCAGCTCAACCTCCTCACAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR TCA 90 bp | TTCAGACTTGGATCCTACAAGCCTGTCCGTTCTGTAAGTGGTACTGCAGGTGGTTCACGAGGATGTAAATaGCTTTCAAGTGGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FRLGSYKPVRSVSGTAGGSRGCK*LSSGGW Trigger: CCAGCCCCCACTTGAAAGTCATTTACATCCTCGTGA...ACCACCTGCAGTACCACTTACAGAACGGACAGGCTTGTAGGATCCAAGTCTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR TCA 90 bp | TTCAGACTTGGATCCTACAAGCCTGTCCGTTCTGTAAGTGGTACTGCAGGTGGTTTCAGGACTGAGCTCTaGCAGAAGCATCTCCGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FRLGSYKPVRSVSGTAGGFRTEL*QKHLRV Trigger: AACACGGAGATGCTTCTGTCAGAGCTCAGTCCTGAA...ACCACCTGCAGTACCACTTACAGAACGGACAGGCTTGTAGGATCCAAGTCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR TCA 90 bp | GTCCAGGATGCCCTCATCTCAAATATGAGCAAAACTGAGTGCCATCTTATGGGTACGTTCCGAGCCATCTaGGACCTTGCAATGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VQDALISNMSKTECHLMGTFRAI*DLAMRR Trigger: CCTCCTCATTGCAAGGTCTCAGATGGCTCGGAACGT...ACCCATAAGATGGCACTCAGTTTTGCTCATATTTGAGATGAGGGCATCCTGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR CCA 90 bp | TTTGCTTCCCTCACTGGTAAAGGTCAGGAGGGTTTTCATGGTTCGAGTCTAGGAGGTGTTGCTTTGCTTTaGGGATACCGGCCAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: FASLTGKGQEGFHGSSLGGVALL*GYRPDP Trigger: AGGATCTGGCCGGTATCCCCAAAGCAAAGCAACACC...TCCTAGACTCGAACCATGAAAACCCTCCTGACCTTTACCAGTGAGGGAAGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| 3UTR CAA 72 bp | GAAGCTCTTGCCTTGGTACTGAGCATGCTTCCCTGCTaGGTGCTGCCTTTCTCTAGCCTATTTAGACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EALALVLSMLPC*VLPFSSLFRLL Trigger: CAGAAGTCTAAATAGGCTAGAGAAAGGCAGCACCAAGCAGGGAAGCATGCTCAGTACCAAGGCAAGAGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR TCA 90 bp | GAGGAGGTTGAGCTGCGCAGTTCACAATGGTTGGAAGCTCTTGCCTTGGTACTGCAAACAGCTTACTGTTaGGGATCTGGAAAACCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EEVELRSSQWLEALALVLQTAYC*GSGKPF Trigger: AAAGGGTTTTCCAGATCCTCAACAGTAAGCTGTTTG...CAGTACCAAGGCAAGAGCTTCCAACCATTGTGAACTGCGCAGCTCAACCTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR TCA 90 bp | GTCCAGGATGCCCTCATCTCAAATATGAGCAAAACTGAGTGCCATCTTATGGGTCCACTATGGATGGCCTaGCAATGGCCACATTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VQDALISNMSKTECHLMGPLWMA*QWPHSG Trigger: ACCTGAATGTGGCCATTGTCAGGCCATCCATAGTGG...ACCCATAAGATGGCACTCAGTTTTGCTCATATTTGAGATGAGGGCATCCTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR GCA 90 bp | AGGTCAGGAGGGTTTTCATGGTTCGAGTCTAGGAACGTCACCCTCCCCATCATCAAAGCGCACTGTGGCTaGACAGTGGAAGATAATATT | + |
|
Preference number: 4 (lower is better) Translates to: RSGGFSWFESRNVTLPIIKAHCG*TVEDNI Trigger: AATATTATCTTCCACTGTGCAGCCACAGTGCGCTTT...GATGATGGGGAGGGTGACGTTCCTAGACTCGAACCATGAAAACCCTCCTGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR GCA 90 bp | AGGTCAGGAGGGTTTTCATGGTTCGAGTCTAGGAACGTCACCCTCCCCATCATCTTTAGGCCTATGAACTaGAGTATACCATCCTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSGGFSWFESRNVTLPIIFRPMN*SIPSYC Trigger: GCAGTAGGATGGTATACTGCAGTTCATAGGCCTAAA...GATGATGGGGAGGGTGACGTTCCTAGACTCGAACCATGAAAACCCTCCTGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR GCA 90 bp | CAGTGCCAGGTGAAGACAGCACCTCTGATGCCTCCCAGCAAACAGACAATATGGTTTAGGCCTATGAACTaGAGTATACCATCCTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: QCQVKTAPLMPPSKQTIWFRPMN*SIPSYC Trigger: GCAGTAGGATGGTATACTGCAGTTCATAGGCCTAAA...CCATATTGTCTGTTTGCTGGGAGGCATCAGAGGTGCTGTCTTCACCTGGCACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR CCA 90 bp | AGGTCAGGAGGGTTTTCATGGTTCGAGTCTAGGAACGTCACCCTCCCCATCATCTTACTGTTGAGGATCTaGAAAACCCTTTCCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RSGGFSWFESRNVTLPIILLLRI*KTLSCS Trigger: ACTGCAGGAAAGGGTTTTCCAGATCCTCAACAGTAA...GATGATGGGGAGGGTGACGTTCCTAGACTCGAACCATGAAAACCCTCCTGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR TCA 90 bp | CTGTTAGTCTCTTCCTGCCTGTTGAGTTCCTATTACTGTATCCTTAGCTGGTGTGGAATAACTTCTCCATaGGCACCTTGCCCAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLVSSCLLSSYYCILSWCGITSP*APCPGS Trigger: GCTTCCTGGGCAAGGTGCTCATGGAGAAGTTATTCC...ACACCAGCTAAGGATACAGTAATAGGAACTCAACAGGCAGGAAGAGACTAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR TCA 90 bp | AGGTCAGGAGGGTTTTCATGGTTCGAGTCTAGGAACGTCACCCTCCCCATCATCTTGGACAGACTTCTTTaGCTTTCTCAAACAGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: RSGGFSWFESRNVTLPIILDRLL*LSQTAY Trigger: GTAAGCTGTTTGAGAAAGTCAAAGAAGTCTGTCCAA...GATGATGGGGAGGGTGACGTTCCTAGACTCGAACCATGAAAACCCTCCTGACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR TCA 90 bp | CTTGTGTTGTATTGTGAGGAGGTTGAGCTGCGCAGTTCACAATGGTTGGAAGCTACTCCATGGAGTCAATaGTCTTTCTTGGCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LVLYCEEVELRSSQWLEATPWSQ*SFLAPQ Trigger: CTGTGGAGCCAAGAAAGATCATTGACTCCATGGAGT...AGCTTCCAACCATTGTGAACTGCGCAGCTCAACCTCCTCACAATACAACACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR GCA 90 bp | TTTGCTTCCCTCACTGGTAAAGGTCAGGAGGGTTTTCATGGTTCGAGTCTAGGACAGGACAGAAGTTCTTaGACGTCTTCCTTGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: FASLTGKGQEGFHGSSLGQDRSS*TSSLLM Trigger: CATCAGCAAGGAAGACGTGCAAGAACTTCTGTCCTG...TCCTAGACTCGAACCATGAAAACCCTCCTGACCTTTACCAGTGAGGGAAGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR GCA 90 bp | GGTAAGCCACATACATCCTGTGTATTAATTACAGACAGAGCTAGAACAGAATCTGCCATTAGCAGGAGCTaGTGGGTGGCCGTGACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GKPHTSCVLITDRARTESAISRS*WVAVTF Trigger: GAACGTCACGGCCACCCAGCAGCTCCTGCTAATGGC...AGATTCTGTTCTAGCTCTGTCTGTAATTAATACACAGGATGTATGTGGCTTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR GCA 90 bp | GATGGACGTCAACCCGAGTTTAAAGAAAAGGGCATTGATAAATGCAAATGTGTGAGGCTCCTGCCAGGTTaGTCCCACTATGGATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DGRQPEFKEKGIDKCKCVRLLPG*SHYGWP Trigger: AGGCCATCCATAGTGGGAGCAACCTGGCAGGAGCCT...CACACATTTGCATTTATCAATGCCCTTTTCTTTAAACTCGGGTTGACGTCCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR CCA 90 bp | CTCTCAGGTCCCCTTTGCGGATGGCCACACAGACAACCACTTACCTCTTTTAGATTACTGTTGAGGATCTaGAAAACCCTTTCCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSGPLCGWPHRQPLTSFRLLLRI*KTLSCS Trigger: ACTGCAGGAAAGGGTTTTCCAGATCCTCAACAGTAA...TCTAAAAGAGGTAAGTGGTTGTCTGTGTGGCCATCCGCAAAGGGGACCTGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR CCA 90 bp | GGAAACAGGGACTGGCCCTGTGTTACAGCCATATTAATATTAAGCCATATTGACGCTTTGGCATCTGGCTaGCCATTAGCAGGAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GNRDWPCVTAILILSHIDALASG*PLAGAA Trigger: AGCAGCTCCTGCTAATGGCCAGCCAGATGCCAAAGC...GTCAATATGGCTTAATATTAATATGGCTGTAACACAGGGCCAGTCCCTGTTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR TCA 90 bp | CTGTTAGTCTCTTCCTGCCTGTTGAGTTCCTATTACTGTATCCTTAGCTGGTGTTCACGAGGATGTAAATaGCTTTCAAGTGGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVSSCLLSSYYCILSWCSRGCK*LSSGGW Trigger: CCAGCCCCCACTTGAAAGTCATTTACATCCTCGTGA...ACACCAGCTAAGGATACAGTAATAGGAACTCAACAGGCAGGAAGAGACTAACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR TCA 90 bp | ACGGCTTGGCTTCATTCCTTTTGTGGTCTAACCCTCTACAGTTGGTACAGCTTTACTCCATGGAGTCAATaGTCTTTCTTGGCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TAWLHSFCGLTLYSWYSFTPWSQ*SFLAPQ Trigger: CTGTGGAGCCAAGAAAGATCATTGACTCCATGGAGT...AAAGCTGTACCAACTGTAGAGGGTTAGACCACAAAAGGAATGAAGCCAAGCCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR TCA 90 bp | GTGCTGCCTTTCTCTAGCCTATTTAGACTTCTGCCACGTGTTCTTCCATCTTTATTCAGGACTGAGCTCTaGCAGAAGCATCTCCGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VLPFSSLFRLLPRVLPSLFRTEL*QKHLRV Trigger: AACACGGAGATGCTTCTGTCAGAGCTCAGTCCTGAA...TAAAGATGGAAGAACACGTGGCAGAAGTCTAAATAGGCTAGAGAAAGGCAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR TCA 90 bp | TTTGCTTCCCTCACTGGTAAAGGTCAGGAGGGTTTTCATGGTTCGAGTCTAGGAAACAGAAGCTTACAATaGAGAACCAGACGTTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: FASLTGKGQEGFHGSSLGNRSLQ*RTRRSE Trigger: CTCGGAACGTCTGGTTCTTCATTGTAAGCTTCTGTT...TCCTAGACTCGAACCATGAAAACCCTCCTGACCTTTACCAGTGAGGGAAGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR GCA 90 bp | GTCCAGGATGCCCTCATCTCAAATATGAGCAAAACTGAGTGCCATCTTATGGGTTGGAAAACCCTTTCCTaGAGTGTCTGTCCAGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: VQDALISNMSKTECHLMGWKTLS*SVCPDL Trigger: CAAGTCTGGACAGACACTGCAGGAAAGGGTTTTCCA...ACCCATAAGATGGCACTCAGTTTTGCTCATATTTGAGATGAGGGCATCCTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR GCA 90 bp | CTGTTAGTCTCTTCCTGCCTGTTGAGTTCCTATTACTGTATCCTTAGCTGGTGTCAATGTGGCTCAGGTTaGAGTTGGAAAAGGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVSSCLLSSYYCILSWCQCGSG*SWKRQW Trigger: CCACTGCCTTTTCCAACTGCAACCTGAGCCACATTG...ACACCAGCTAAGGATACAGTAATAGGAACTCAACAGGCAGGAAGAGACTAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR GCA 90 bp | GTGCTGCCTTTCTCTAGCCTATTTAGACTTCTGCCACGTGTTCTTCCATCTTTAAGGTTTCCGCTCTCTTaGTGCACTACTATCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VLPFSSLFRLLPRVLPSLRFPLS*CTTISP Trigger: GGGAGAGATAGTAGTGCAGCAAGAGAGCGGAAACCT...TAAAGATGGAAGAACACGTGGCAGAAGTCTAAATAGGCTAGAGAAAGGCAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR CCA 90 bp | GTCCAGGATGCCCTCATCTCAAATATGAGCAAAACTGAGTGCCATCTTATGGGTGTGTCTGTCCAGACTTaGGTCTCACGAGGATGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VQDALISNMSKTECHLMGVSVQT*VSRGCK Trigger: TTTACATCCTCGTGAGACCCAAGTCTGGACAGACAC...ACCCATAAGATGGCACTCAGTTTTGCTCATATTTGAGATGAGGGCATCCTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR CCA 90 bp | CTGTTAGTCTCTTCCTGCCTGTTGAGTTCCTATTACTGTATCCTTAGCTGGTGTTGGCTCCACAGGGCATaGGTAGATGACCTCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLVSSCLLSSYYCILSWCWLHRA*VDDLIN Trigger: ATTGATGAGGTCATCTACCCATGCCCTGTGGAGCCA...ACACCAGCTAAGGATACAGTAATAGGAACTCAACAGGCAGGAAGAGACTAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR TCA 90 bp | GATGGACGTCAACCCGAGTTTAAAGAAAAGGGCATTGATAAATGCAAATGTGTGCCACTATGGATGGCCTaGCAATGGCCACATTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DGRQPEFKEKGIDKCKCVPLWMA*QWPHSG Trigger: ACCTGAATGTGGCCATTGTCAGGCCATCCATAGTGG...CACACATTTGCATTTATCAATGCCCTTTTCTTTAAACTCGGGTTGACGTCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR CCA 90 bp | CTTGTGTTGTATTGTGAGGAGGTTGAGCTGCGCAGTTCACAATGGTTGGAAGCTACTGTGGCTGCACAGTaGAAGATAATATTGGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: LVLYCEEVELRSSQWLEATVAAQ*KIILVQ Trigger: CTGTACCAATATTATCTTCCACTGTGCAGCCACAGT...AGCTTCCAACCATTGTGAACTGCGCAGCTCAACCTCCTCACAATACAACACAAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR CCA 90 bp | GTGCTGCCTTTCTCTAGCCTATTTAGACTTCTGCCACGTGTTCTTCCATCTTTAGGTGAAGTCAGCATTTaGCCTTCTGAAAGCACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLPFSSLFRLLPRVLPSLGEVSI*PSESTL Trigger: GAGAGTGCTTTCAGAAGGCCAAATGCTGACTTCACC...TAAAGATGGAAGAACACGTGGCAGAAGTCTAAATAGGCTAGAGAAAGGCAGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR CCA 90 bp | CTTGTGTTGTATTGTGAGGAGGTTGAGCTGCGCAGTTCACAATGGTTGGAAGCTAAGTTGAATACTCTCTaGTCTTCAGGACTGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVLYCEEVELRSSQWLEAKLNTL*SSGLSS Trigger: AGAGCTCAGTCCTGAAGACCAGAGAGTATTCAACTT...AGCTTCCAACCATTGTGAACTGCGCAGCTCAACCTCCTCACAATACAACACAAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR TCA 90 bp | GTTTGTAAGTGTATTGTAGAGTTAAACAAGAAAATGCCCAGGAAGCATCACAGAACGTTCCGAGCCATCTaGGACCTTGCAATGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VCKCIVELNKKMPRKHHRTFRAI*DLAMRR Trigger: CCTCCTCATTGCAAGGTCTCAGATGGCTCGGAACGT...TCTGTGATGCTTCCTGGGCATTTTCTTGTTTAACTCTACAATACACTTACAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR GCA 90 bp | GGTAAGCCACATACATCCTGTGTATTAATTACAGACAGAGCTAGAACAGAATCTAACTGGAATCACATCTaGCACTGCCATGGGAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: GKPHTSCVLITDRARTESNWNHI*HCHGSR Trigger: GCGACTCCCATGGCAGTGGCAGATGTGATTCCAGTT...AGATTCTGTTCTAGCTCTGTCTGTAATTAATACACAGGATGTATGTGGCTTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR CCA 90 bp | GGAAACAGGGACTGGCCCTGTGTTACAGCCATATTAATATTAAGCCATATTGACGGTGAAGTCAGCATTTaGCCTTCTGAAAGCACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GNRDWPCVTAILILSHIDGEVSI*PSESTL Trigger: GAGAGTGCTTTCAGAAGGCCAAATGCTGACTTCACC...GTCAATATGGCTTAATATTAATATGGCTGTAACACAGGGCCAGTCCCTGTTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| 3UTR CAA 72 bp | CACACAAAGAATAGGGAAGAAGGTGGAATGGCAACTTaGACTGGAAGCTTGGGAGTGCTTCTTGTTACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HTKNREEGGMAT*TGSLGVLLVTF Trigger: GAAAGTAACAAGAAGCACTCCCAAGCTTCCAGTCAAAGTTGCCATTCCACCTTCTTCCCTATTCTTTGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| 3UTR CAA 72 bp | ATCCTTAGCTGGTGTCTTTCATGTAACTCACAAGTCTaGCAGATGTCTCACATAGGGAAACCCACAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: ILSWCLSCNSQV*QMSHIGKPTGT Trigger: AGTACCTGTGGGTTTCCCTATGTGAGACATCTGCAAGACTTGTGAGTTACATGAAAGACACCAGCTAAGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| CDS-3UTR TCA 90 bp | GTGCTGCCTTTCTCTAGCCTATTTAGACTTCTGCCACGTGTTCTTCCATCTTTACCCGAAAGTAGGAGATaGACTTGTAACAGAAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: VLPFSSLFRLLPRVLPSLPESRR*TCNRSL Trigger: TAAGCTTCTGTTACAAGTTCATCTCCTACTTTCGGG...TAAAGATGGAAGAACACGTGGCAGAAGTCTAAATAGGCTAGAGAAAGGCAGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR GCA 90 bp | GTGCTGCCTTTCTCTAGCCTATTTAGACTTCTGCCACGTGTTCTTCCATCTTTAGGTCTGATCTTCTCATaGACATTTGGACAGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLPFSSLFRLLPRVLPSLGLIFS*TFGQTS Trigger: AGAAGTCTGTCCAAATGTGCATGAGAAGATCAGACC...TAAAGATGGAAGAACACGTGGCAGAAGTCTAAATAGGCTAGAGAAAGGCAGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR GCA 90 bp | ATCTTTAGAACTGTCCTGTTAGTCTCTTCCTGCCTGTTGAGTTCCTATTACTGTTTTCCGCTCTCTTGCTaGACTACTATCTCTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: IFRTVLLVSSCLLSSYYCFPLSC*TTISPK Trigger: CTTGGGAGAGATAGTAGTGCAGCAAGAGAGCGGAAA...ACAGTAATAGGAACTCAACAGGCAGGAAGAGACTAACAGGACAGTTCTAAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR GCA 90 bp | ATCTTTAGAACTGTCCTGTTAGTCTCTTCCTGCCTGTTGAGTTCCTATTACTGTAGCCTTCTTAGGTGTTaGTTTGCTTTGGGGATACCG | + |
|
Preference number: 4 (lower is better) Translates to: IFRTVLLVSSCLLSSYYCSLLRC*FALGIP Trigger: CGGTATCCCCAAAGCAAAGCAACACCTAAGAAGGCT...ACAGTAATAGGAACTCAACAGGCAGGAAGAGACTAACAGGACAGTTCTAAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR CCA 90 bp | TTTGCTTCCCTCACTGGTAAAGGTCAGGAGGGTTTTCATGGTTCGAGTCTAGGACTTCTCATGCACATTTaGACAGACTTCTTTGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: FASLTGKGQEGFHGSSLGLLMHI*TDFFDF Trigger: AAAGTCAAAGAAGTCTGTCCAAATGTGCATGAGAAG...TCCTAGACTCGAACCATGAAAACCCTCCTGACCTTTACCAGTGAGGGAAGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR GCA 90 bp | GGAAACAGGGACTGGCCCTGTGTTACAGCCATATTAATATTAAGCCATATTGACAAAGCGCACTGTGGCTaGACAGTGGAAGATAATATT | + |
|
Preference number: 4 (lower is better) Translates to: GNRDWPCVTAILILSHIDKAHCG*TVEDNI Trigger: AATATTATCTTCCACTGTGCAGCCACAGTGCGCTTT...GTCAATATGGCTTAATATTAATATGGCTGTAACACAGGGCCAGTCCCTGTTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| 3UTR CAA 72 bp | ATCTTTAGAACTGTCCTGTTAGTCTCTTCCTGCCTGTaGAGTTCCTATTACTGTATCCTTAGCTGGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IFRTVLLVSSCL*SSYYCILSWCL Trigger: AAGACACCAGCTAAGGATACAGTAATAGGAACTCAACAGGCAGGAAGAGACTAACAGGACAGTTCTAAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS-3UTR GCA 90 bp | GTTTGTAAGTGTATTGTAGAGTTAAACAAGAAAATGCCCAGGAAGCATCACAGATGGAAAACCCTTTCCTaGAGTGTCTGTCCAGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: VCKCIVELNKKMPRKHHRWKTLS*SVCPDL Trigger: CAAGTCTGGACAGACACTGCAGGAAAGGGTTTTCCA...TCTGTGATGCTTCCTGGGCATTTTCTTGTTTAACTCTACAATACACTTACAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR CCA 90 bp | GGTAAGCCACATACATCCTGTGTATTAATTACAGACAGAGCTAGAACAGAATCTACTGTGGCTGCACAGTaGAAGATAATATTGGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: GKPHTSCVLITDRARTESTVAAQ*KIILVQ Trigger: CTGTACCAATATTATCTTCCACTGTGCAGCCACAGT...AGATTCTGTTCTAGCTCTGTCTGTAATTAATACACAGGATGTATGTGGCTTACC 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR GCA 90 bp | GTTTGTAAGTGTATTGTAGAGTTAAACAAGAAAATGCCCAGGAAGCATCACAGAGGTCTGATCTTCTCATaGACATTTGGACAGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VCKCIVELNKKMPRKHHRGLIFS*TFGQTS Trigger: AGAAGTCTGTCCAAATGTGCATGAGAAGATCAGACC...TCTGTGATGCTTCCTGGGCATTTTCTTGTTTAACTCTACAATACACTTACAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| 3UTR CAA 72 bp | GTAAGAAAGTCTTGGGTAGGTTATATCAGGTGTGTATaGTGTGTGTGGATTATGATCTTGATGAAATGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VRKSWVGYIRCV*CVWIMILMKCL Trigger: CAAACATTTCATCAAGATCATAATCCACACACACAATACACACCTGATATAACCTACCCAAGACTTTCTTAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR CAA 90 bp | TGCCTTCCTTCCCCTCTCAGGTCCCCTTTGCGGATGGCCACACAGACAACCACTAGGTGTTGCTTTGCTTaGGGGATACCGGCCAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: CLPSPLRSPLRMATQTTTRCCFA*GIPARS Trigger: GGATCTGGCCGGTATCCCCAAAGCAAAGCAACACCT...AGTGGTTGTCTGTGTGGCCATCCGCAAAGGGGACCTGAGAGGGGAAGGAAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR CAA 90 bp | GAGTCAGCCCAGCCAACAGTGCCAGGTGAAGACAGCACCTCTGATGCCTCCCAGCATTCCCAACTGTGGTaGATGAAATACTCCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: ESAQPTVPGEDSTSDASQHSQLW*MKYSSM Trigger: CATGCTGGAGTATTTCATCAACCACAGTTGGGAATG...CTGGGAGGCATCAGAGGTGCTGTCTTCACCTGGCACTGTTGGCTGGGCTGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR CAA 90 bp | GAGGAGGTTGAGCTGCGCAGTTCACAATGGTTGGAAGCTCTTGCCTTGGTACTGTGGCTCAGGTTGCAGTaGGAAAAGGCAGTGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: EEVELRSSQWLEALALVLWLRLQ*EKAVEM Trigger: CATCTCCACTGCCTTTTCCAACTGCAACCTGAGCCA...CAGTACCAAGGCAAGAGCTTCCAACCATTGTGAACTGCGCAGCTCAACCTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
||
| CDS GCA 90 bp | TTGCACGTCTTCCTTGCTGATGGCGAAGTCACGCTGGTTGAGGTCTaGGGAGATGGGTCTGATCTTCTCATGCACATTTGGACAGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LHVFLADGEVTLVEV*GDGSDLLMHIWTDF Trigger: GAAGTCTGTCCAAATGTGCATGAGAAGATCAGACCCATCTCCGCAGACCTCAACCAGCGTGACTTCGCCATCAGCAAGGAAGACGTGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032443.14 ENSMUST00000111607.4 |
||
| CDS CCA 90 bp | GACAGAAGTTCTTGCACGTCTTCCTTGCTGATGGCGAAGTCACGCTaGTTGAGGTCTGCGGAGATGGGTCTGATCTTCTCATGCACATTT | + |
|
Preference number: 5 (lower is better) Translates to: DRSSCTSSLLMAKSR*LRSAEMGLIFSCTF Trigger: AAATGTGCATGAGAAGATCAGACCCATCTCCGCAGACCTCAACCAGCGTGACTTCGCCATCAGCAAGGAAGACGTGCAAGAACTTCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032443.14 ENSMUST00000111607.4 |
||
| CDS TCA 90 bp | AGCTTGAACAAGGGACAAATGAAGAACCAGACGTTCCGAGCCATCTaGGACCTTGCAATGAGGAGGCGCCAGATGATAAGAAACAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SLNKGQMKNQTFRAI*DLAMRRRQMIRNRA Trigger: TGCCCTGTTTCTTATCATCTGGCGCCTCCTCATTGCAAGGTCTCAGATGGCTCGGAACGTCTGGTTCTTCATTTGTCCCTTGTTCAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR CAA 90 bp | GCCTCAGAGGCAGCCACAGACGGCTTGGCTTCATTCCTTTTGTGGTCTAACCCTTCAAACAGCTTACTGTaGAGGATCTGGAAAACCCTT | + |
|
Preference number: 5 (lower is better) Translates to: ASEAATDGLASFLLWSNPSNSLL*RIWKTL Trigger: AAGGGTTTTCCAGATCCTCAACAGTAAGCTGTTTGA...AGGGTTAGACCACAAAAGGAATGAAGCCAAGCCGTCTGTGGCTGCCTCTGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS GCA 90 bp | CAGCTGCACAGCTTCTCTCAGATGTGCATCAAAGCGCACTGTGGCTaGACAGTGGAAGATAATATTGGTACAGGACAGAAGTTCTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: QLHSFSQMCIKAHCG*TVEDNIGTGQKFLH Trigger: GTGCAAGAACTTCTGTCCTGTACCAATATTATCTTCCACTGTGCAGCCACAGTGCGCTTTGATGCACATCTGAGAGAAGCTGTGCAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032443.14 ENSMUST00000111607.4 |
||
| CDS GCA 90 bp | CAAGGGACAAATGAAGAACCAGACGTTCCGAGCCATCTGAGACCTTaGAATGAGGAGGCGCCAGATGATAAGAAACAGGGCAGTGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: QGTNEEPDVPSHLRP*NEEAPDDKKQGSVK Trigger: TTTAACACTGCCCTGTTTCTTATCATCTGGCGCCTCCTCATTGCAAGGTCTCAGATGGCTCGGAACGTCTGGTTCTTCATTTGTCCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR CAA 90 bp | ACGGCTTGGCTTCATTCCTTTTGTGGTCTAACCCTCTACAGTTGGTACAGCTTTTGGCTCAGGTTGCAGTaGGAAAAGGCAGTGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: TAWLHSFCGLTLYSWYSFWLRLQ*EKAVEM Trigger: CATCTCCACTGCCTTTTCCAACTGCAACCTGAGCCA...AAAGCTGTACCAACTGTAGAGGGTTAGACCACAAAAGGAATGAAGCCAAGCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
||
| CDS-3UTR CAA 90 bp | GGGTTTTCATGGTTCGAGTCTAGGAACGTCACCCTCCCCATCATCCTTTCTGACCATTCCCAACTGTGGTaGATGAAATACTCCAGCATG | + |
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Preference number: 5 (lower is better) Translates to: GFSWFESRNVTLPIILSDHSQLW*MKYSSM Trigger: CATGCTGGAGTATTTCATCAACCACAGTTGGGAATG...GTCAGAAAGGATGATGGGGAGGGTGACGTTCCTAGACTCGAACCATGAAAACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| CDS GCA 90 bp | GAAGCTTACAATGAAGAACCAGACGTTCCGAGCCATCTGAGACCTTaGAATGAGGAGGCGCCAGATGATAAGAAACAGGGCAGTGTTAAA | + |
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Preference number: 5 (lower is better) Translates to: EAYNEEPDVPSHLRP*NEEAPDDKKQGSVK Trigger: TTTAACACTGCCCTGTTTCTTATCATCTGGCGCCTCCTCATTGCAAGGTCTCAGATGGCTCGGAACGTCTGGTTCTTCATTGTAAGCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| CDS-3UTR CAA 90 bp | TCCTGTAGAGTGGAACTAACACTCTCGTCTTGCCTTCCTTCCCCTCTCAGGTCCCAGTGGAAGATAATATaGGTACAGGACAGAAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: SCRVELTLSSCLPSPLRSQWKII*VQDRSS Trigger: AGAACTTCTGTCCTGTACCAATATTATCTTCCACTG...GGACCTGAGAGGGGAAGGAAGGCAAGACGAGAGTGTTAGTTCCACTCTACAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
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| CDS GCA 90 bp | AAGTCACGCTGGTTGAGGTCTGCGGAGATGGGTCTGATCTTCTCATaGACATTTGGACAGACTTCTTTGACTTTCTCAAACAGCTTACTG | + |
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Preference number: 5 (lower is better) Translates to: KSRWLRSAEMGLIFS*TFGQTSLTFSNSLL Trigger: CAGTAAGCTGTTTGAGAAAGTCAAAGAAGTCTGTCCAAATGTGCATGAGAAGATCAGACCCATCTCCGCAGACCTCAACCAGCGTGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032443.14 ENSMUST00000111607.4 |
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| CDS-3UTR CAA 90 bp | GAGGAGGTTGAGCTGCGCAGTTCACAATGGTTGGAAGCTCTTGCCTTGGTACTGTTTGGACAGACTTCTTaGACTTTCTCAAACAGCTTA | + |
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Preference number: 5 (lower is better) Translates to: EEVELRSSQWLEALALVLFGQTS*TFSNSL Trigger: TAAGCTGTTTGAGAAAGTCAAAGAAGTCTGTCCAAA...CAGTACCAAGGCAAGAGCTTCCAACCATTGTGAACTGCGCAGCTCAACCTCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| CDS-3UTR CAA 90 bp | CTGTTAGTCTCTTCCTGCCTGTTGAGTTCCTATTACTGTATCCTTAGCTGGTGTACAGGACAGAAGTTCTaGCACGTCTTCCTTGCTGAT | + |
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Preference number: 5 (lower is better) Translates to: LLVSSCLLSSYYCILSWCTGQKF*HVFLAD Trigger: ATCAGCAAGGAAGACGTGCAAGAACTTCTGTCCTGT...ACACCAGCTAAGGATACAGTAATAGGAACTCAACAGGCAGGAAGAGACTAACAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| CDS-3UTR CAA 90 bp | TTTGCTTCCCTCACTGGTAAAGGTCAGGAGGGTTTTCATGGTTCGAGTCTAGGATACCAGTTACAGGGATaGAGATTACCAGATGTGGAA | + |
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Preference number: 5 (lower is better) Translates to: FASLTGKGQEGFHGSSLGYQLQG*RLPDVE Trigger: TTCCACATCTGGTAATCTCAATCCCTGTAACTGGTA...TCCTAGACTCGAACCATGAAAACCCTCCTGACCTTTACCAGTGAGGGAAGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| CDS-3UTR CAA 90 bp | ACTGACCTTAATCAAATTTGCAGAAACTGCCAGAAAGGGTTTTCCCAACATATTAGGTGTTGCTTTGCTTaGGGGATACCGGCCAGATCC | + |
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Preference number: 5 (lower is better) Translates to: TDLNQICRNCQKGFSQHIRCCFA*GIPARS Trigger: GGATCTGGCCGGTATCCCCAAAGCAAAGCAACACCT...AATATGTTGGGAAAACCCTTTCTGGCAGTTTCTGCAAATTTGATTAAGGTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| CDS-3UTR CAA 90 bp | CTGTTAGTCTCTTCCTGCCTGTTGAGTTCCTATTACTGTATCCTTAGCTGGTGTTCAAACAGCTTACTGTaGAGGATCTGGAAAACCCTT | + |
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Preference number: 5 (lower is better) Translates to: LLVSSCLLSSYYCILSWCSNSLL*RIWKTL Trigger: AAGGGTTTTCCAGATCCTCAACAGTAAGCTGTTTGA...ACACCAGCTAAGGATACAGTAATAGGAACTCAACAGGCAGGAAGAGACTAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| CDS-3UTR CAA 90 bp | GTCCAGGATGCCCTCATCTCAAATATGAGCAAAACTGAGTGCCATCTTATGGGTCAGTGGAAGATAATATaGGTACAGGACAGAAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: VQDALISNMSKTECHLMGQWKII*VQDRSS Trigger: AGAACTTCTGTCCTGTACCAATATTATCTTCCACTG...ACCCATAAGATGGCACTCAGTTTTGCTCATATTTGAGATGAGGGCATCCTGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032443.14 |
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| CDS-3UTR CAA 90 bp | GATGGACGTCAACCCGAGTTTAAAGAAAAGGGCATTGATAAATGCAAATGTGTGTACCAGTTACAGGGATaGAGATTACCAGATGTGGAA | + |
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Preference number: 5 (lower is better) Translates to: DGRQPEFKEKGIDKCKCVYQLQG*RLPDVE Trigger: TTCCACATCTGGTAATCTCAATCCCTGTAACTGGTA...CACACATTTGCATTTATCAATGCCCTTTTCTTTAAACTCGGGTTGACGTCCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
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| CDS-3UTR CAA 90 bp | GGAAACAGGGACTGGCCCTGTGTTACAGCCATATTAATATTAAGCCATATTGACTTTGGACAGACTTCTTaGACTTTCTCAAACAGCTTA | + |
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Preference number: 5 (lower is better) Translates to: GNRDWPCVTAILILSHIDFGQTS*TFSNSL Trigger: TAAGCTGTTTGAGAAAGTCAAAGAAGTCTGTCCAAA...GTCAATATGGCTTAATATTAATATGGCTGTAACACAGGGCCAGTCCCTGTTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111607.4 |
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| CDS GCA 72 bp | GGCCGTGACGTTCAGCTGCACAGCTTCTCTCAGATGTaGATCAAAGCGCACTGTGGCTGCACAGTGGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: GRDVQLHSFSQM*IKAHCGCTVED Trigger: ATCTTCCACTGTGCAGCCACAGTGCGCTTTGATGCACATCTGAGAGAAGCTGTGCAGCTGAACGTCACGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032443.14 ENSMUST00000111607.4 |
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| CDS GCA 72 bp | ATTAGCAGGAGCTGCTGGGTGGCCGTGACGTTCAGCTaGACAGCTTCTCTCAGATGTGCATCAAAGCGCACT | + |
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Preference number: 6 (lower is better) Translates to: ISRSCWVAVTFS*TASLRCASKRT Trigger: AGTGCGCTTTGATGCACATCTGAGAGAAGCTGTGCAGCTGAACGTCACGGCCACCCAGCAGCTCCTGCTAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032443.14 ENSMUST00000111607.4 |
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| CDS CAA 72 bp | TGCACGTCTTCCTTGCTGATGGCGAAGTCACGCTGGTaGAGGTCTGCGGAGATGGGTCTGATCTTCTCATGC | + |
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Preference number: 6 (lower is better) Translates to: CTSSLLMAKSRW*RSAEMGLIFSC Trigger: GCATGAGAAGATCAGACCCATCTCCGCAGACCTCAACCAGCGTGACTTCGCCATCAGCAAGGAAGACGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032443.14 ENSMUST00000111607.4 |
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| CDS CCA 72 bp | TCTTGCACGTCTTCCTTGCTGATGGCGAAGTCACGCTaGTTGAGGTCTGCGGAGATGGGTCTGATCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: SCTSSLLMAKSR*LRSAEMGLIFS Trigger: TGAGAAGATCAGACCCATCTCCGCAGACCTCAACCAGCGTGACTTCGCCATCAGCAAGGAAGACGTGCAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032443.14 ENSMUST00000111607.4 |
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| CDS GCA 72 bp | TTCCTTGCTGATGGCGAAGTCACGCTGGTTGAGGTCTaGGGAGATGGGTCTGATCTTCTCATGCACATTTGG | + |
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Preference number: 6 (lower is better) Translates to: FLADGEVTLVEV*GDGSDLLMHIW Trigger: CCAAATGTGCATGAGAAGATCAGACCCATCTCCGCAGACCTCAACCAGCGTGACTTCGCCATCAGCAAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032443.14 ENSMUST00000111607.4 |
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| CDS CAA 90 bp | AGAAGTTCTTGCACGTCTTCCTTGCTGATGGCGAAGTCACGCTGGTaGAGGTCTGCGGAGATGGGTCTGATCTTCTCATGCACATTTGGA | + |
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Preference number: 6 (lower is better) Translates to: RSSCTSSLLMAKSRW*RSAEMGLIFSCTFG Trigger: TCCAAATGTGCATGAGAAGATCAGACCCATCTCCGCAGACCTCAACCAGCGTGACTTCGCCATCAGCAAGGAAGACGTGCAAGAACTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032443.14 ENSMUST00000111607.4 |
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| CDS GCA 72 bp | AATGAAGAACCAGACGTTCCGAGCCATCTGAGACCTTaGAATGAGGAGGCGCCAGATGATAAGAAACAGGGC | + |
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Preference number: 6 (lower is better) Translates to: NEEPDVPSHLRP*NEEAPDDKKQG Trigger: GCCCTGTTTCTTATCATCTGGCGCCTCCTCATTGCAAGGTCTCAGATGGCTCGGAACGTCTGGTTCTTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032443.14 ENSMUST00000111607.4 |
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| CDS CAA 72 bp | ATATTGGTACAGGACAGAAGTTCTTGCACGTCTTCCTaGCTGATGGCGAAGTCACGCTGGTTGAGGTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: ILVQDRSSCTSS*LMAKSRWLRSA Trigger: CGCAGACCTCAACCAGCGTGACTTCGCCATCAGCAAGGAAGACGTGCAAGAACTTCTGTCCTGTACCAATAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032443.14 ENSMUST00000111607.4 |
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| CDS GCA 72 bp | AACAGCTTACTGTTGAGGATCTGGAAAACCCTTTCCTaGAGTGTCTGTCCAGACTTGGGTCTCACGAGGATG | + |
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Preference number: 6 (lower is better) Translates to: NSLLLRIWKTLS*SVCPDLGLTRM Trigger: CATCCTCGTGAGACCCAAGTCTGGACAGACACTGCAGGAAAGGGTTTTCCAGATCCTCAACAGTAAGCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032443.14 ENSMUST00000111607.4 |
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| CDS CAA 90 bp | ACTCTCTGGTCTTCAGGACTGAGCTCTGACAGAAGCATCTCCGTGTaGTTTGTGCTCCATTCCCAACTGTGGTTGATGAAATACTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: TLWSSGLSSDRSISV*FVLHSQLWLMKYSS Trigger: GCTGGAGTATTTCATCAACCACAGTTGGGAATGGAGCACAAACAACACGGAGATGCTTCTGTCAGAGCTCAGTCCTGAAGACCAGAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032443.14 ENSMUST00000111607.4 |
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| CDS GCA 72 bp | AGCTTCTCTCAGATGTGCATCAAAGCGCACTGTGGCTaGACAGTGGAAGATAATATTGGTACAGGACAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SFSQMCIKAHCG*TVEDNIGTGQK Trigger: CTTCTGTCCTGTACCAATATTATCTTCCACTGTGCAGCCACAGTGCGCTTTGATGCACATCTGAGAGAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032443.14 ENSMUST00000111607.4 |
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| CDS CCA 72 bp | GAATGTTCCGGAGCCTTCTTAGGTGTTGCTTTGCTTTaGGGATACCGGCCAGATCCTCTTTTAGTAGATACT | + |
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Preference number: 6 (lower is better) Translates to: ECSGAFLGVALL*GYRPDPLLVDT Trigger: AGTATCTACTAAAAGAGGATCTGGCCGGTATCCCCAAAGCAAAGCAACACCTAAGAAGGCTCCGGAACATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032443.14 ENSMUST00000111607.4 |
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| CDS CAA 72 bp | ACAGTGGAAGATAATATTGGTACAGGACAGAAGTTCTaGCACGTCTTCCTTGCTGATGGCGAAGTCACGCTG | + |
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Preference number: 6 (lower is better) Translates to: TVEDNIGTGQKF*HVFLADGEVTL Trigger: CAGCGTGACTTCGCCATCAGCAAGGAAGACGTGCAAGAACTTCTGTCCTGTACCAATATTATCTTCCACTGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032443.14 ENSMUST00000111607.4 |
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| CDS CAA 72 bp | TCTTCAGGACTGAGCTCTGACAGAAGCATCTCCGTGTaGTTTGTGCTCCATTCCCAACTGTGGTTGATGAAA | + |
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Preference number: 6 (lower is better) Translates to: SSGLSSDRSISV*FVLHSQLWLMK Trigger: TTTCATCAACCACAGTTGGGAATGGAGCACAAACAACACGGAGATGCTTCTGTCAGAGCTCAGTCCTGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032443.14 ENSMUST00000111607.4 |
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| CDS TCA 72 bp | AAAGTTGAATACTCTCTGGTCTTCAGGACTGAGCTCTaGCAGAAGCATCTCCGTGTTGTTTGTGCTCCATTC | + |
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Preference number: 6 (lower is better) Translates to: KVEYSLVFRTEL*QKHLRVVCAPF Trigger: GAATGGAGCACAAACAACACGGAGATGCTTCTGTCAGAGCTCAGTCCTGAAGACCAGAGAGTATTCAACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032443.14 ENSMUST00000111607.4 |
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