Pregenerated sensors for FAR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030759Ensembl transcript IDs: ENSMUST00000033018.15, ENSMUST00000067929.15, ENSMUST00000122890.2, ENSMUST00000129087.8, ENSMUST00000136158.8, ENSMUST00000164745.8
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTAGAAAGGAATGCTTACAAAGCCATTTACACTCTAACCCCATCCTaGCACACTCTCAGCACCCCCGCCAAGTACTTCACTCAATCTCTA | + |
|
Preference number: 1 (lower is better) Translates to: LERNAYKAIYTLTPS*HTLSTPAKYFTQSL Trigger: TAGAGATTGAGTGAAGTACTTGGCGGGGGTGCTGAGAGTGTGTCAGGATGGGGTTAGAGTGTAAATGGCTTTGTAAGCATTCCTTTCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| 3UTR TCA 90 bp | GTGTTACGATACATTAGCATTGCCAAGGCAATTAAACAGTTACAATaGCATTACAGTGTACAAATATGTATGCCAGAGTTCAGAGAAGGA | + |
|
Preference number: 1 (lower is better) Translates to: VLRYISIAKAIKQLQ*HYSVQICMPEFREG Trigger: TCCTTCTCTGAACTCTGGCATACATATTTGTACACTGTAATGTCATTGTAACTGTTTAATTGCCTTGGCAATGCTAATGTATCGTAACAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| 3UTR-3UTR CCA 90 bp | CACACCATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTACTGCAGTTCTGAGCTaGCATACCACAGTGTGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: HTIMVSHTLYRHGPRPETTAVLS*HTTVCS Trigger: TGAACACACTGTGGTATGCCAGCTCAGAACTGCAGT...AGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGATGGTGTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR-3UTR GCA 90 bp | CACACCATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTAGTTATACTGGTCAATaGTCCCATAGCCCCACTTCT | + |
|
Preference number: 2 (lower is better) Translates to: HTIMVSHTLYRHGPRPETSYTGQ*SHSPTS Trigger: AGAAGTGGGGCTATGGGAGCATTGACCAGTATAACT...AGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGATGGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR-3UTR GCA 90 bp | CACACCATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTCTAGGCCTTCTGTCTaGACATTTTCCATTGCACTG | + |
|
Preference number: 2 (lower is better) Translates to: HTIMVSHTLYRHGPRPETSRPSV*TFSIAL Trigger: CAGTGCAATGGAAAATGTGCAGACAGAAGGCCTAGA...AGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGATGGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCTTACAAAGCCATTTACACTCTAACCCCATCCTGACACACTCTCAGCACCCCAATTTGAGTGACTACTaGAGTTCTGAGCTGGCATAC | + |
|
Preference number: 2 (lower is better) Translates to: CLQSHLHSNPILTHSQHPNLSDY*SSELAY Trigger: GTATGCCAGCTCAGAACTGCAGTAGTCACTCAAATT...GGGGTGCTGAGAGTGTGTCAGGATGGGGTTAGAGTGTAAATGGCTTTGTAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| 3UTR-3UTR GCA 90 bp | CACACCATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTAATTTGAGTGACTACTaGAGTTCTGAGCTGGCATAC | + |
|
Preference number: 2 (lower is better) Translates to: HTIMVSHTLYRHGPRPETNLSDY*SSELAY Trigger: GTATGCCAGCTCAGAACTGCAGTAGTCACTCAAATT...AGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGATGGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTCAGAAACTGCAGTTCTGAGCTaGCATACCACAGTGTGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: IMVSHTLYRHGPRPETSETAVLS*HTTVCS Trigger: TGAACACACTGTGGTATGCCAGCTCAGAACTGCAGT...TTCTGAAGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR-3UTR TCA 90 bp | CACACCATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTCACCAGAGTTCCATTTaGACAAAATGCAGACTAGAA | + |
|
Preference number: 2 (lower is better) Translates to: HTIMVSHTLYRHGPRPETHQSSI*TKCRLE Trigger: TTCTAGTCTGCATTTTGTTCAAATGGAACTCTGGTG...AGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGATGGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTCAGAATCTAGGCCTTCTGTCTaGACATTTTCCATTGCACTG | + |
|
Preference number: 2 (lower is better) Translates to: IMVSHTLYRHGPRPETSESRPSV*TFSIAL Trigger: CAGTGCAATGGAAAATGTGCAGACAGAAGGCCTAGA...TTCTGAAGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR-3UTR GCA 90 bp | TATCTGGTTCAGTTTACAGGCCTGCCCACATTGCACCTGATTCTTTTCAGAGACTCTAGGCCTTCTGTCTaGACATTTTCCATTGCACTG | + |
|
Preference number: 2 (lower is better) Translates to: YLVQFTGLPTLHLILFRDSRPSV*TFSIAL Trigger: CAGTGCAATGGAAAATGTGCAGACAGAAGGCCTAGA...GTCTCTGAAAAGAATCAGGTGCAATGTGGGCAGGCCTGTAAACTGAACCAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCCCTCCCACTACCAAGCTTTGTCTGGCAGACTGGAGAAACACTTATTCTATGCACCAGAGTTCCATTTaGACAAAATGCAGACTAGAA | + |
|
Preference number: 2 (lower is better) Translates to: SPPTTKLCLADWRNTYSMHQSSI*TKCRLE Trigger: TTCTAGTCTGCATTTTGTTCAAATGGAACTCTGGTG...CATAGAATAAGTGTTTCTCCAGTCTGCCAGACAAAGCTTGGTAGTGGGAGGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| 3UTR-3UTR TCA 90 bp | CACACCATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTGTGTTGGCAAACACATaGGGACATTTTCTTAATGTT | + |
|
Preference number: 2 (lower is better) Translates to: HTIMVSHTLYRHGPRPETVLANT*GHFLNV Trigger: AACATTAAGAAAATGTCCTCATGTGTTTGCCAACAC...AGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGATGGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCTTACAAAGCCATTTACACTCTAACCCCATCCTGACACACTCTCAGCACCCCCAGATCTACTACTGGTaGAGAACCTATAAACTAACA | + |
|
Preference number: 2 (lower is better) Translates to: CLQSHLHSNPILTHSQHPQIYYW*RTYKLT Trigger: TGTTAGTTTATAGGTTCTTCACCAGTAGTAGATCTG...GGGGTGCTGAGAGTGTGTCAGGATGGGGTTAGAGTGTAAATGGCTTTGTAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| 3UTR-3UTR GCA 90 bp | TATCTGGTTCAGTTTACAGGCCTGCCCACATTGCACCTGATTCTTTTCAGAGACCCCCTTCCTACCCTTTaGATTCCAAGGATTAAAATG | + |
|
Preference number: 2 (lower is better) Translates to: YLVQFTGLPTLHLILFRDPLPTL*IPRIKM Trigger: CATTTTAATCCTTGGAATGCAAAGGGTAGGAAGGGG...GTCTCTGAAAAGAATCAGGTGCAATGTGGGCAGGCCTGTAAACTGAACCAGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCCCTCCCACTACCAAGCTTTGTCTGGCAGACTGGAGAAACACTTATTCTATGCATATGACCCGGTCATaGTTTTCTCAACTAAGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: SPPTTKLCLADWRNTYSMHMTRS*FSQLSV Trigger: AACACTTAGTTGAGAAAAGCATGACCGGGTCATATG...CATAGAATAAGTGTTTCTCCAGTCTGCCAGACAAAGCTTGGTAGTGGGAGGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| 3UTR-3UTR CCA 90 bp | CACACCATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTCAAATTAGTGTGTGTTaGCAAACACATGAGGACATT | + |
|
Preference number: 2 (lower is better) Translates to: HTIMVSHTLYRHGPRPETQISVC*QTHEDI Trigger: AATGTCCTCATGTGTTTGCCAACACACACTAATTTG...AGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGATGGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR-3UTR TCA 90 bp | TATCTGGTTCAGTTTACAGGCCTGCCCACATTGCACCTGATTCTTTTCAGAGACCACCAGAGTTCCATTTaGACAAAATGCAGACTAGAA | + |
|
Preference number: 2 (lower is better) Translates to: YLVQFTGLPTLHLILFRDHQSSI*TKCRLE Trigger: TTCTAGTCTGCATTTTGTTCAAATGGAACTCTGGTG...GTCTCTGAAAAGAATCAGGTGCAATGTGGGCAGGCCTGTAAACTGAACCAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCCCTCCCACTACCAAGCTTTGTCTGGCAGACTGGAGAAACACTTATTCTATGGTGTTGGCAAACACATaGGGACATTTTCTTAATGTT | + |
|
Preference number: 2 (lower is better) Translates to: SPPTTKLCLADWRNTYSMVLANT*GHFLNV Trigger: AACATTAAGAAAATGTCCTCATGTGTTTGCCAACAC...CATAGAATAAGTGTTTCTCCAGTCTGCCAGACAAAGCTTGGTAGTGGGAGGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| 3UTR-3UTR GCA 90 bp | TCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTCAGAATCATTCCAACCCCTTCCTACCCTTTaGATTCCAAGGATTAAAATG | + |
|
Preference number: 2 (lower is better) Translates to: SHTLYRHGPRPETSESFQPLPTL*IPRIKM Trigger: CATTTTAATCCTTGGAATGCAAAGGGTAGGAAGGGG...TTGGAATGATTCTGAAGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCTTACAAAGCCATTTACACTCTAACCCCATCCTGACACACTCTCAGCACCCCAATATGTTCCAGAACTaGACAGTTATACTGGTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: CLQSHLHSNPILTHSQHPNMFQN*TVILVN Trigger: ATTGACCAGTATAACTGTGCAGTTCTGGAACATATT...GGGGTGCTGAGAGTGTGTCAGGATGGGGTTAGAGTGTAAATGGCTTTGTAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| 3UTR-3UTR CCA 90 bp | TCCCCTCCCACTACCAAGCTTTGTCTGGCAGACTGGAGAAACACTTATTCTATGGGGAAAAACCCTAAATaGTTCAGAATACAGTTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: SPPTTKLCLADWRNTYSMGKNPK*FRIQFC Trigger: GCAAAACTGTATTCTGAACCATTTAGGGTTTTTCCC...CATAGAATAAGTGTTTCTCCAGTCTGCCAGACAAAGCTTGGTAGTGGGAGGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| 3UTR-3UTR GCA 90 bp | TCCCCTCCCACTACCAAGCTTTGTCTGGCAGACTGGAGAAACACTTATTCTATGTGCATGTTTTCACTTTaGTTCAAATGCAGAGTATAC | + |
|
Preference number: 2 (lower is better) Translates to: SPPTTKLCLADWRNTYSMCMFSL*FKCRVY Trigger: GTATACTCTGCATTTGAAGCAAAGTGAAAACATGCA...CATAGAATAAGTGTTTCTCCAGTCTGCCAGACAAAGCTTGGTAGTGGGAGGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| 3UTR-3UTR CCA 90 bp | CATAATAATGCATGTTCATATGGGGCAAGTCCTGTGGGAAAATTTATAAGGAGGACTGCAGTTCTGAGCTaGCATACCACAGTGTGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: HNNACSYGASPVGKFIRRTAVLS*HTTVCS Trigger: TGAACACACTGTGGTATGCCAGCTCAGAACTGCAGT...CCTCCTTATAAATTTTCCCACAGGACTTGCCCCATATGAACATGCATTATTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTCAGAATCATTCCAAGTGTTGGCAAACACATaGGGACATTTTCTTAATGTT | + |
|
Preference number: 2 (lower is better) Translates to: SHTLYRHGPRPETSESFQVLANT*GHFLNV Trigger: AACATTAAGAAAATGTCCTCATGTGTTTGCCAACAC...TTGGAATGATTCTGAAGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTCAGAAAATATGTTCCAGAACTaGACAGTTATACTGGTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: IMVSHTLYRHGPRPETSENMFQN*TVILVN Trigger: ATTGACCAGTATAACTGTGCAGTTCTGGAACATATT...TTCTGAAGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTCAGAATGCATGTTTTCACTTTaGTTCAAATGCAGAGTATAC | + |
|
Preference number: 2 (lower is better) Translates to: IMVSHTLYRHGPRPETSECMFSL*FKCRVY Trigger: GTATACTCTGCATTTGAAGCAAAGTGAAAACATGCA...TTCTGAAGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR-3UTR GCA 90 bp | CATAATAATGCATGTTCATATGGGGCAAGTCCTGTGGGAAAATTTATAAGGAGGCCCCTTCCTACCCTTTaGATTCCAAGGATTAAAATG | + |
|
Preference number: 2 (lower is better) Translates to: HNNACSYGASPVGKFIRRPLPTL*IPRIKM Trigger: CATTTTAATCCTTGGAATGCAAAGGGTAGGAAGGGG...CCTCCTTATAAATTTTCCCACAGGACTTGCCCCATATGAACATGCATTATTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCAAACTCTTACAATATGACTTGAATGCAAGTGTAGCTGATAAAGCTCAACGCAAATCCTCTTCAAAATaGAAACACATCTCACCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: SKLLQYDLNASVADKAQRKSSSK*KHISPE Trigger: CTCTGGTGAGATGTGTTTTCATTTTGAAGAGGATTT...GCGTTGAGCTTTATCAGCTACACTTGCATTCAAGTCATATTGTAAGAGTTTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR-3UTR TCA 90 bp | CATAATAATGCATGTTCATATGGGGCAAGTCCTGTGGGAAAATTTATAAGGAGGAAATCCTCTTCAAAATaGAAACACATCTCACCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: HNNACSYGASPVGKFIRRKSSSK*KHISPE Trigger: CTCTGGTGAGATGTGTTTTCATTTTGAAGAGGATTT...CCTCCTTATAAATTTTCCCACAGGACTTGCCCCATATGAACATGCATTATTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCAAACTCTTACAATATGACTTGAATGCAAGTGTAGCTGATAAAGCTCAACGCTTACTACACAAAGTCTaGCTTCAACAGAGAAGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: SKLLQYDLNASVADKAQRLLHKV*LQQRSF Trigger: AAAGCTTCTCTGTTGAAGCCAGACTTTGTGTAGTAA...GCGTTGAGCTTTATCAGCTACACTTGCATTCAAGTCATATTGTAAGAGTTTGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCAAACTCTTACAATATGACTTGAATGCAAGTGTAGCTGATAAAGCTCAACGCAATATGTTCCAGAACTaGACAGTTATACTGGTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: SKLLQYDLNASVADKAQRNMFQN*TVILVN Trigger: ATTGACCAGTATAACTGTGCAGTTCTGGAACATATT...GCGTTGAGCTTTATCAGCTACACTTGCATTCAAGTCATATTGTAAGAGTTTGGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR-3UTR GCA 90 bp | CATAATAATGCATGTTCATATGGGGCAAGTCCTGTGGGAAAATTTATAAGGAGGTGCATGTTTTCACTTTaGTTCAAATGCAGAGTATAC | + |
|
Preference number: 2 (lower is better) Translates to: HNNACSYGASPVGKFIRRCMFSL*FKCRVY Trigger: GTATACTCTGCATTTGAAGCAAAGTGAAAACATGCA...CCTCCTTATAAATTTTCCCACAGGACTTGCCCCATATGAACATGCATTATTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR CAA 90 bp | AGCAAATTACAAAGAGCATACATCTCCAAACTCTTACAATATGACTaGAATGCAAGTGTAGCTGATAAAGCTCAACGCTCTCACATTTTA | + |
|
Preference number: 2 (lower is better) Translates to: SKLQRAYISKLLQYD*NASVADKAQRSHIL Trigger: TAAAATGTGAGAGCGTTGAGCTTTATCAGCTACACTTGCATTCAAGTCATATTGTAAGAGTTTGGAGATGTATGCTCTTTGTAATTTGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR TCA 72 bp | AATGCTTACAAAGCCATTTACACTCTAACCCCATCCTaGCACACTCTCAGCACCCCCGCCAAGTACTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: NAYKAIYTLTPS*HTLSTPAKYFT Trigger: AGTGAAGTACTTGGCGGGGGTGCTGAGAGTGTGTCAGGATGGGGTTAGAGTGTAAATGGCTTTGTAAGCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| 3UTR CCA 72 bp | AGAGGTCAGAGTCCCCTCCCACTACCAAGCTTTGTCTaGCAGACTGGAGAAACACTTATTCTATGTTACCCT | + |
|
Preference number: 3 (lower is better) Translates to: RGQSPLPLPSFV*QTGETLILCYP Trigger: AGGGTAACATAGAATAAGTGTTTCTCCAGTCTGCCAGACAAAGCTTGGTAGTGGGAGGGGACTCTGACCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| 3UTR-3UTR CAA 90 bp | CACACCATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTAATCAGAACGAGTCTTaGCGTTTGACACCACCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: HTIMVSHTLYRHGPRPETNQNES*RLTPPV Trigger: TACAGGTGGTGTCAAACGCAAAGACTCGTTCTGATT...AGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGATGGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR CCA 72 bp | GAGTCCCCTCCCACTACCAAGCTTTGTCTGGCAGACTaGAGAAACACTTATTCTATGTTACCCTTAAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: ESPPTTKLCLAD*RNTYSMLPLSQ Trigger: TTGACTTAAGGGTAACATAGAATAAGTGTTTCTCCAGTCTGCCAGACAAAGCTTGGTAGTGGGAGGGGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTACAAAGCCATTTACACTCTAACCCCATCCTGACACACTCTCAGCACCCCGTGCATGTTTTCACTTaGCTTCAAATGCAGAGTATA | + |
|
Preference number: 3 (lower is better) Translates to: CLQSHLHSNPILTHSQHPVHVFT*LQMQSI Trigger: TATACTCTGCATTTGAAGCAAAGTGAAAACATGCAC...GGGGTGCTGAGAGTGTGTCAGGATGGGGTTAGAGTGTAAATGGCTTTGTAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| 3UTR-3UTR CAA 90 bp | TATCTGGTTCAGTTTACAGGCCTGCCCACATTGCACCTGATTCTTTTCAGAGACGTGCATGTTTTCACTTaGCTTCAAATGCAGAGTATA | + |
|
Preference number: 3 (lower is better) Translates to: YLVQFTGLPTLHLILFRDVHVFT*LQMQSI Trigger: TATACTCTGCATTTGAAGCAAAGTGAAAACATGCAC...GTCTCTGAAAAGAATCAGGTGCAATGTGGGCAGGCCTGTAAACTGAACCAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCAAACTCTTACAATATGACTTGAATGCAAGTGTAGCTGATAAAGCTCAACGCAATCAGAACGAGTCTTaGCGTTTGACACCACCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: SKLLQYDLNASVADKAQRNQNES*RLTPPV Trigger: TACAGGTGGTGTCAAACGCAAAGACTCGTTCTGATT...GCGTTGAGCTTTATCAGCTACACTTGCATTCAAGTCATATTGTAAGAGTTTGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTCAGAATCATTCCAAGTGCATGTTTTCACTTaGCTTCAAATGCAGAGTATA | + |
|
Preference number: 3 (lower is better) Translates to: SHTLYRHGPRPETSESFQVHVFT*LQMQSI Trigger: TATACTCTGCATTTGAAGCAAAGTGAAAACATGCAC...TTGGAATGATTCTGAAGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCAAACTCTTACAATATGACTTGAATGCAAGTGTAGCTGATAAAGCTCAACGCCAAATAAAAATTAATTaGACCTCCTCAGCACAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SKLLQYDLNASVADKAQRQIKIN*TSSAQP Trigger: AGGCTGTGCTGAGGAGGTCAAATTAATTTTTATTTG...GCGTTGAGCTTTATCAGCTACACTTGCATTCAAGTCATATTGTAAGAGTTTGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR TCA 72 bp | TATCTAGGCCTTCTGTCTGCACATTTTCCATTGCACTaGATATTAGGACTTCATGTTAAGGCATGTTTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: YLGLLSAHFPLH*ILGLHVKACFN Trigger: ATTAAAACATGCCTTAACATGAAGTCCTAATATTCAGTGCAATGGAAAATGTGCAGACAGAAGGCCTAGATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR GCA 72 bp | GAAAAGTGGTTTCCTTTACCGTGCATGTTTTCACTTTaGTTCAAATGCAGAGTATACATTGATACAGAATCT | + |
|
Preference number: 3 (lower is better) Translates to: EKWFPLPCMFSL*FKCRVYIDTES Trigger: AGATTCTGTATCAATGTATACTCTGCATTTGAAGCAAAGTGAAAACATGCACGGTAAAGGAAACCACTTTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR TCA 72 bp | TACATTAGCATTGCCAAGGCAATTAAACAGTTACAATaGCATTACAGTGTACAAATATGTATGCCAGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: YISIAKAIKQLQ*HYSVQICMPEF Trigger: GAACTCTGGCATACATATTTGTACACTGTAATGTCATTGTAACTGTTTAATTGCCTTGGCAATGCTAATGTA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| 3UTR GCA 72 bp | ATCAAATCCTTAACTAATTTATCTAGGCCTTCTGTCTaGACATTTTCCATTGCACTGAATATTAGGACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: IKSLTNLSRPSV*TFSIALNIRTS Trigger: TGAAGTCCTAATATTCAGTGCAATGGAAAATGTGCAGACAGAAGGCCTAGATAAATTAGTTAAGGATTTGAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR GCA 90 bp | AATGCTCCCATAGCCCCACTTCTGCCCCCTTCCTACCCTTTGCATTCCAAGGATTCCAGAATACCAGGCTaGAGCAAGGCTCGTGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: NAPIAPLLPPSYPLHSKDSRIPG*SKARVD Trigger: GTCAACACGAGCCTTGCTGCAGCCTGGTATTCTGGA...ATCCTTGGAATGCAAAGGGTAGGAAGGGGGCAGAAGTGGGGCTATGGGAGCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR GCA 90 bp | AATGCTCCCATAGCCCCACTTCTGCCCCCTTCCTACCCTTTGCATTCCAAGGATTACAGGAACGAGATCTaGAAGGGCATTGTTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NAPIAPLLPPSYPLHSKDYRNEI*KGIVGG Trigger: GCCTCCAACAATGCCCTTGCAGATCTCGTTCCTGTA...ATCCTTGGAATGCAAAGGGTAGGAAGGGGGCAGAAGTGGGGCTATGGGAGCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTACAAAGCCATTTACACTCTAACCCCATCCTGACACACTCTCAGCACCCCAACCAGTGGCTCCTGTaGGAAGGATATTCTTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CLQSHLHSNPILTHSQHPNQWLL*EGYSSP Trigger: AGGGGAAGAATATCCTTCTCACAGGAGCCACTGGTT...GGGGTGCTGAGAGTGTGTCAGGATGGGGTTAGAGTGTAAATGGCTTTGTAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| CDS-3UTR TCA 90 bp | TGCTTACAAAGCCATTTACACTCTAACCCCATCCTGACACACTCTCAGCACCCCGTAGGCATACGCTGTTaGGACATGCATGAACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLQSHLHSNPILTHSQHPVGIRC*DMHEHF Trigger: GAAGTGTTCATGCATGTCTCAACAGCGTATGCCTAC...GGGGTGCTGAGAGTGTGTCAGGATGGGGTTAGAGTGTAAATGGCTTTGTAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| CDS-3UTR TCA 90 bp | TCCCCTCCCACTACCAAGCTTTGTCTGGCAGACTGGAGAAACACTTATTCTATGCAGCAAGGCTCGTGTTaGCCACTACATCTACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPPTTKLCLADWRNTYSMQQGSC*PLHLQE Trigger: TTCCTGTAGATGTAGTGGTCAACACGAGCCTTGCTG...CATAGAATAAGTGTTTCTCCAGTCTGCCAGACAAAGCTTGGTAGTGGGAGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| CDS-3UTR GCA 90 bp | CACACCATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTTTCCAGAAGCACCTTaGCTAAGAAACCAGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HTIMVSHTLYRHGPRPETFPEAP*LRNQWL Trigger: GAGCCACTGGTTTCTTAGGCAAGGTGCTTCTGGAAA...AGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGATGGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CCA 90 bp | AATGCTCCCATAGCCCCACTTCTGCCCCCTTCCTACCCTTTGCATTCCAAGGATTGTTTTCATCATCCTTaGGCTTCTTCCAGTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: NAPIAPLLPPSYPLHSKDCFHHP*ASSSHP Trigger: AGGATGACTGGAAGAAGCCCAAGGATGATGAAAACA...ATCCTTGGAATGCAAAGGGTAGGAAGGGGGCAGAAGTGGGGCTATGGGAGCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000164745.8 |
||
| 3UTR CAA 72 bp | AAGGGAGAGGTCAGAGTCCCCTCCCACTACCAAGCTTaGTCTGGCAGACTGGAGAAACACTTATTCTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: KGEVRVPSHYQA*SGRLEKHLFYV Trigger: AACATAGAATAAGTGTTTCTCCAGTCTGCCAGACAAAGCTTGGTAGTGGGAGGGGACTCTGACCTCTCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| CDS-3UTR TCA 90 bp | ATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTCAGAAAACCAGTGGCTCCTGTaGGAAGGATATTCTTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IMVSHTLYRHGPRPETSENQWLL*EGYSSP Trigger: AGGGGAAGAATATCCTTCTCACAGGAGCCACTGGTT...TTCTGAAGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR GCA 90 bp | AATGCTCCCATAGCCCCACTTCTGCCCCCTTCCTACCCTTTGCATTCCAAGGATAACATACTCTGCCAATaGCTTGGTGTATATGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: NAPIAPLLPPSYPLHSKDNILCQ*LGVYVR Trigger: ACGTACATATACACCAAGGCATTGGCAGAGTATGTT...ATCCTTGGAATGCAAAGGGTAGGAAGGGGGCAGAAGTGGGGCTATGGGAGCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR GCA 90 bp | CACACCATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTAAGAATTCCTTTCCCTaGCGCAATGAAGAGACCACT | + |
|
Preference number: 4 (lower is better) Translates to: HTIMVSHTLYRHGPRPETKNSFP*RNEETT Trigger: AGTGGTCTCTTCATTGCGGCAGGGAAAGGAATTCTT...AGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGATGGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTACAAAGCCATTTACACTCTAACCCCATCCTGACACACTCTCAGCACCCCAAGAATTCCTTTCCCTaGCGCAATGAAGAGACCACT | + |
|
Preference number: 4 (lower is better) Translates to: CLQSHLHSNPILTHSQHPKNSFP*RNEETT Trigger: AGTGGTCTCTTCATTGCGGCAGGGAAAGGAATTCTT...GGGGTGCTGAGAGTGTGTCAGGATGGGGTTAGAGTGTAAATGGCTTTGTAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| CDS-3UTR CCA 90 bp | ATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTCAGAACTGCAAGGGCATTGTTaGAGGCACGCATTGTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: IMVSHTLYRHGPRPETSELQGHC*RHALFE Trigger: TTCGAACAATGCGTGCCTCCAACAATGCCCTTGCAG...TTCTGAAGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR TCA 90 bp | CACACCATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTCTGTTGAGACATGCATaGACACTTCCAGATTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HTIMVSHTLYRHGPRPETLLRHA*TLPDSS Trigger: TGAAGAATCTGGAAGTGTTCATGCATGTCTCAACAG...AGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGATGGTGTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTACAAAGCCATTTACACTCTAACCCCATCCTGACACACTCTCAGCACCCCCTGTTGAGACATGCATaGACACTTCCAGATTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CLQSHLHSNPILTHSQHPLLRHA*TLPDSS Trigger: TGAAGAATCTGGAAGTGTTCATGCATGTCTCAACAG...GGGGTGCTGAGAGTGTGTCAGGATGGGGTTAGAGTGTAAATGGCTTTGTAAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| CDS-3UTR TCA 90 bp | TATCTGGTTCAGTTTACAGGCCTGCCCACATTGCACCTGATTCTTTTCAGAGACGTAGGCATACGCTGTTaGGACATGCATGAACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: YLVQFTGLPTLHLILFRDVGIRC*DMHEHF Trigger: GAAGTGTTCATGCATGTCTCAACAGCGTATGCCTAC...GTCTCTGAAAAGAATCAGGTGCAATGTGGGCAGGCCTGTAAACTGAACCAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR TCA 90 bp | TCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTCAGAATCATTCCAACAGCAAGGCTCGTGTTaGCCACTACATCTACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SHTLYRHGPRPETSESFQQQGSC*PLHLQE Trigger: TTCCTGTAGATGTAGTGGTCAACACGAGCCTTGCTG...TTGGAATGATTCTGAAGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR GCA 90 bp | CACACCATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTACGCTGTTGAGACATaGATGAACACTTCCAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: HTIMVSHTLYRHGPRPETYAVET*MNTSRF Trigger: GAATCTGGAAGTGTTCATGCATGTCTCAACAGCGTA...AGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGATGGTGTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CCA 90 bp | CACACCATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTGGGATCTACAGGGGGTaGATAAACTACTTCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: HTIMVSHTLYRHGPRPETGIYRG*INYFIN Trigger: ATTGATGAAGTAGTTTATCCACCCCCTGTAGATCCC...AGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGATGGTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CCA 90 bp | TCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTCAGAATCATTCCAACTGCAAGGGCATTGTTaGAGGCACGCATTGTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SHTLYRHGPRPETSESFQLQGHC*RHALFE Trigger: TTCGAACAATGCGTGCCTCCAACAATGCCCTTGCAG...TTGGAATGATTCTGAAGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR GCA 90 bp | TCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTCAGAATCATTCCAATTTCCAGAAGCACCTTaGCTAAGAAACCAGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SHTLYRHGPRPETSESFQFPEAP*LRNQWL Trigger: GAGCCACTGGTTTCTTAGGCAAGGTGCTTCTGGAAA...TTGGAATGATTCTGAAGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTACAAAGCCATTTACACTCTAACCCCATCCTGACACACTCTCAGCACCCCATTCTTCATTTGCTGTaGAAGGAGAATAAGCTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: CLQSHLHSNPILTHSQHPILHLL*KENKLS Trigger: CGACAGCTTATTCTCCTTGCACAGCAAATGAAGAAT...GGGGTGCTGAGAGTGTGTCAGGATGGGGTTAGAGTGTAAATGGCTTTGTAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| CDS-3UTR GCA 90 bp | TCCCCTCCCACTACCAAGCTTTGTCTGGCAGACTGGAGAAACACTTATTCTATGTACGCTGTTGAGACATaGATGAACACTTCCAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: SPPTTKLCLADWRNTYSMYAVET*MNTSRF Trigger: GAATCTGGAAGTGTTCATGCATGTCTCAACAGCGTA...CATAGAATAAGTGTTTCTCCAGTCTGCCAGACAAAGCTTGGTAGTGGGAGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| CDS-3UTR GCA 90 bp | ATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTCAGAAAAGAATTCCTTTCCCTaGCGCAATGAAGAGACCACT | + |
|
Preference number: 4 (lower is better) Translates to: IMVSHTLYRHGPRPETSEKNSFP*RNEETT Trigger: AGTGGTCTCTTCATTGCGGCAGGGAAAGGAATTCTT...TTCTGAAGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CCA 90 bp | CACACCATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTGGGTGCCTGAATACTTaGTTTAAAGGATTCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HTIMVSHTLYRHGPRPETGCLNT*FKGFIL Trigger: CAAGATGAATCCTTTAAACCAAGTATTCAGGCACCC...AGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGATGGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067929.15 |
||
| CDS-3UTR GCA 90 bp | CATAATAATGCATGTTCATATGGGGCAAGTCCTGTGGGAAAATTTATAAGGAGGTCCAGAATACCAGGCTaGAGCAAGGCTCGTGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HNNACSYGASPVGKFIRRSRIPG*SKARVD Trigger: GTCAACACGAGCCTTGCTGCAGCCTGGTATTCTGGA...CCTCCTTATAAATTTTCCCACAGGACTTGCCCCATATGAACATGCATTATTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CCA 90 bp | TATCTGGTTCAGTTTACAGGCCTGCCCACATTGCACCTGATTCTTTTCAGAGACAGAGCCAGTTTAGGTTaGGTAAGTTCACTGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: YLVQFTGLPTLHLILFRDRASLG*VSSLLI Trigger: GATCAACAGTGAACTTACCCAACCTAAACTGGCTCT...GTCTCTGAAAAGAATCAGGTGCAATGTGGGCAGGCCTGTAAACTGAACCAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CCA 90 bp | ATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTCAGAAAGAGCCAGTTTAGGTTaGGTAAGTTCACTGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: IMVSHTLYRHGPRPETSERASLG*VSSLLI Trigger: GATCAACAGTGAACTTACCCAACCTAAACTGGCTCT...TTCTGAAGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CCA 90 bp | TATCTGGTTCAGTTTACAGGCCTGCCCACATTGCACCTGATTCTTTTCAGAGACTGTTTTCATCATCCTTaGGCTTCTTCCAGTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: YLVQFTGLPTLHLILFRDCFHHP*ASSSHP Trigger: AGGATGACTGGAAGAAGCCCAAGGATGATGAAAACA...GTCTCTGAAAAGAATCAGGTGCAATGTGGGCAGGCCTGTAAACTGAACCAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000164745.8 |
||
| CDS-3UTR TCA 90 bp | TCCAAACTCTTACAATATGACTTGAATGCAAGTGTAGCTGATAAAGCTCAACGCCAGCAAGGCTCGTGTTaGCCACTACATCTACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SKLLQYDLNASVADKAQRQQGSC*PLHLQE Trigger: TTCCTGTAGATGTAGTGGTCAACACGAGCCTTGCTG...GCGTTGAGCTTTATCAGCTACACTTGCATTCAAGTCATATTGTAAGAGTTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR GCA 90 bp | TCCAAACTCTTACAATATGACTTGAATGCAAGTGTAGCTGATAAAGCTCAACGCTACAGGAACGAGATCTaGAAGGGCATTGTTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKLLQYDLNASVADKAQRYRNEI*KGIVGG Trigger: GCCTCCAACAATGCCCTTGCAGATCTCGTTCCTGTA...GCGTTGAGCTTTATCAGCTACACTTGCATTCAAGTCATATTGTAAGAGTTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CCA 90 bp | TCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTCAGAATCATTCCAAAGAGCCAGTTTAGGTTaGGTAAGTTCACTGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: SHTLYRHGPRPETSESFQRASLG*VSSLLI Trigger: GATCAACAGTGAACTTACCCAACCTAAACTGGCTCT...TTGGAATGATTCTGAAGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CCA 90 bp | TATCTGGTTCAGTTTACAGGCCTGCCCACATTGCACCTGATTCTTTTCAGAGACACAGTAGCCGCACAGTaGAATATGACATTTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YLVQFTGLPTLHLILFRDTVAAQ*NMTFVE Trigger: TTCTACAAATGTCATATTCCACTGTGCGGCTACTGT...GTCTCTGAAAAGAATCAGGTGCAATGTGGGCAGGCCTGTAAACTGAACCAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTACAAAGCCATTTACACTCTAACCCCATCCTGACACACTCTCAGCACCCCCACCATGATGTTTCTTaGTCTATTAACTCCAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: CLQSHLHSNPILTHSQHPHHDVS*SINSRI Trigger: TATTCTGGAGTTAATAGACCAAGAAACATCATGGTG...GGGGTGCTGAGAGTGTGTCAGGATGGGGTTAGAGTGTAAATGGCTTTGTAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| CDS-3UTR TCA 90 bp | CATAATAATGCATGTTCATATGGGGCAAGTCCTGTGGGAAAATTTATAAGGAGGGTAGGCATACGCTGTTaGGACATGCATGAACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: HNNACSYGASPVGKFIRRVGIRC*DMHEHF Trigger: GAAGTGTTCATGCATGTCTCAACAGCGTATGCCTAC...CCTCCTTATAAATTTTCCCACAGGACTTGCCCCATATGAACATGCATTATTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR TCA 90 bp | TCCAAACTCTTACAATATGACTTGAATGCAAGTGTAGCTGATAAAGCTCAACGCTCTGACCTGTCAACCTaGGAGCAAGATCGAGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: SKLLQYDLNASVADKAQRSDLST*EQDRAI Trigger: TATTGCTCGATCTTGCTCTCAGGTTGACAGGTCAGA...GCGTTGAGCTTTATCAGCTACACTTGCATTCAAGTCATATTGTAAGAGTTTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067929.15 |
||
| CDS-3UTR GCA 90 bp | TCCAAACTCTTACAATATGACTTGAATGCAAGTGTAGCTGATAAAGCTCAACGCTTTCCAGAAGCACCTTaGCTAAGAAACCAGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKLLQYDLNASVADKAQRFPEAP*LRNQWL Trigger: GAGCCACTGGTTTCTTAGGCAAGGTGCTTCTGGAAA...GCGTTGAGCTTTATCAGCTACACTTGCATTCAAGTCATATTGTAAGAGTTTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CCA 90 bp | ATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTCAGAACACCATGATGTTTCTTaGTCTATTAACTCCAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: IMVSHTLYRHGPRPETSEHHDVS*SINSRI Trigger: TATTCTGGAGTTAATAGACCAAGAAACATCATGGTG...TTCTGAAGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR TCA 90 bp | CATAATAATGCATGTTCATATGGGGCAAGTCCTGTGGGAAAATTTATAAGGAGGCTGTTGAGACATGCATaGACACTTCCAGATTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HNNACSYGASPVGKFIRRLLRHA*TLPDSS Trigger: TGAAGAATCTGGAAGTGTTCATGCATGTCTCAACAG...CCTCCTTATAAATTTTCCCACAGGACTTGCCCCATATGAACATGCATTATTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR GCA 90 bp | CATAATAATGCATGTTCATATGGGGCAAGTCCTGTGGGAAAATTTATAAGGAGGTACGCTGTTGAGACATaGATGAACACTTCCAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: HNNACSYGASPVGKFIRRYAVET*MNTSRF Trigger: GAATCTGGAAGTGTTCATGCATGTCTCAACAGCGTA...CCTCCTTATAAATTTTCCCACAGGACTTGCCCCATATGAACATGCATTATTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR GCA 90 bp | CATAATAATGCATGTTCATATGGGGCAAGTCCTGTGGGAAAATTTATAAGGAGGATTCTTCATTTGCTGTaGAAGGAGAATAAGCTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: HNNACSYGASPVGKFIRRILHLL*KENKLS Trigger: CGACAGCTTATTCTCCTTGCACAGCAAATGAAGAAT...CCTCCTTATAAATTTTCCCACAGGACTTGCCCCATATGAACATGCATTATTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CCA 90 bp | CATAATAATGCATGTTCATATGGGGCAAGTCCTGTGGGAAAATTTATAAGGAGGACAGTAGCCGCACAGTaGAATATGACATTTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HNNACSYGASPVGKFIRRTVAAQ*NMTFVE Trigger: TTCTACAAATGTCATATTCCACTGTGCGGCTACTGT...CCTCCTTATAAATTTTCCCACAGGACTTGCCCCATATGAACATGCATTATTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| 3UTR CAA 72 bp | CAAAGAGCATACATCTCCAAACTCTTACAATATGACTaGAATGCAAGTGTAGCTGATAAAGCTCAACGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QRAYISKLLQYD*NASVADKAQRS Trigger: AGAGCGTTGAGCTTTATCAGCTACACTTGCATTCAAGTCATATTGTAAGAGTTTGGAGATGTATGCTCTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CCA 90 bp | CATAATAATGCATGTTCATATGGGGCAAGTCCTGTGGGAAAATTTATAAGGAGGCACCATGATGTTTCTTaGTCTATTAACTCCAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: HNNACSYGASPVGKFIRRHHDVS*SINSRI Trigger: TATTCTGGAGTTAATAGACCAAGAAACATCATGGTG...CCTCCTTATAAATTTTCCCACAGGACTTGCCCCATATGAACATGCATTATTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CAA 90 bp | AATGCTCCCATAGCCCCACTTCTGCCCCCTTCCTACCCTTTGCATTCCAAGGATTTCCTCCACTCGCTCTaGGGGTGTCTGACCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: NAPIAPLLPPSYPLHSKDFLHSL*GCLTSF Trigger: AAAGCTGGTCAGACACCCCAAGAGCGAGTGGAGGAA...ATCCTTGGAATGCAAAGGGTAGGAAGGGGGCAGAAGTGGGGCTATGGGAGCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CAA 90 bp | AATGCTCCCATAGCCCCACTTCTGCCCCCTTCCTACCCTTTGCATTCCAAGGATTCTGCAAGGGCATTGTaGGAGGCACGCATTGTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: NAPIAPLLPPSYPLHSKDSARAL*EARIVR Trigger: TCGAACAATGCGTGCCTCCAACAATGCCCTTGCAGA...ATCCTTGGAATGCAAAGGGTAGGAAGGGGGCAGAAGTGGGGCTATGGGAGCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CAA 90 bp | AATGCTCCCATAGCCCCACTTCTGCCCCCTTCCTACCCTTTGCATTCCAAGGATCGGATATTCCGCAACTaGTTGAGATGCTTCCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: NAPIAPLLPPSYPLHSKDRIFRN*LRCFRA Trigger: TGCTCGGAAGCATCTCAACAAGTTGCGGAATATCCG...ATCCTTGGAATGCAAAGGGTAGGAAGGGGGCAGAAGTGGGGCTATGGGAGCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CAA 90 bp | TCCCCTCCCACTACCAAGCTTTGTCTGGCAGACTGGAGAAACACTTATTCTATGTTCCTCCACTCGCTCTaGGGGTGTCTGACCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SPPTTKLCLADWRNTYSMFLHSL*GCLTSF Trigger: AAAGCTGGTCAGACACCCCAAGAGCGAGTGGAGGAA...CATAGAATAAGTGTTTCTCCAGTCTGCCAGACAAAGCTTGGTAGTGGGAGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| CDS-3UTR CAA 90 bp | CACACCATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTCTGCAAGGGCATTGTaGGAGGCACGCATTGTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: HTIMVSHTLYRHGPRPETSARAL*EARIVR Trigger: TCGAACAATGCGTGCCTCCAACAATGCCCTTGCAGA...AGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGATGGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTACAAAGCCATTTACACTCTAACCCCATCCTGACACACTCTCAGCACCCCAGATCTGCAAGGGCATaGTTGGAGGCACGCATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: CLQSHLHSNPILTHSQHPRSARA*LEARIV Trigger: AACAATGCGTGCCTCCAACAATGCCCTTGCAGATCT...GGGGTGCTGAGAGTGTGTCAGGATGGGGTTAGAGTGTAAATGGCTTTGTAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| CDS-3UTR CAA 90 bp | TGCTTACAAAGCCATTTACACTCTAACCCCATCCTGACACACTCTCAGCACCCCTTTTCCAGAAGCACCTaGCCTAAGAAACCAGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CLQSHLHSNPILTHSQHPFSRST*PKKPVA Trigger: AGCCACTGGTTTCTTAGGCAAGGTGCTTCTGGAAAA...GGGGTGCTGAGAGTGTGTCAGGATGGGGTTAGAGTGTAAATGGCTTTGTAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| CDS-3UTR CAA 90 bp | CACACCATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTTTTCCAGAAGCACCTaGCCTAAGAAACCAGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HTIMVSHTLYRHGPRPETFSRST*PKKPVA Trigger: AGCCACTGGTTTCTTAGGCAAGGTGCTTCTGGAAAA...AGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGATGGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CAA 90 bp | CACACCATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTGGCAACATTTAGCTTaGCTCCTTCCTGCTGCACAA | + |
|
Preference number: 5 (lower is better) Translates to: HTIMVSHTLYRHGPRPETWQHLA*LLPAAQ Trigger: TTGTGCAGCAGGAAGGAGCAAAGCTAAATGTTGCCA...AGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGATGGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CAA 90 bp | ATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTCAGAAAGATCTGCAAGGGCATaGTTGGAGGCACGCATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: IMVSHTLYRHGPRPETSERSARA*LEARIV Trigger: AACAATGCGTGCCTCCAACAATGCCCTTGCAGATCT...TTCTGAAGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS TCA 90 bp | GCAACTTTTCCAGAAGCACCTTGCCTAAGAAACCAGTGGCTCCTGTaGGAAGGATATTCTTCCCCTCGTAGTATTCTGGGATTGAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: ATFPEAPCLRNQWLL*EGYSSPRSILGLKP Trigger: TGGTTTCAATCCCAGAATACTACGAGGGGAAGAATATCCTTCTCACAGGAGCCACTGGTTTCTTAGGCAAGGTGCTTCTGGAAAAGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000122890.2 ENSMUST00000129087.8 ENSMUST00000136158.8 ENSMUST00000164745.8 |
||
| CDS-3UTR CAA 90 bp | AATGCTCCCATAGCCCCACTTCTGCCCCCTTCCTACCCTTTGCATTCCAAGGATTGGGTAAGTTCACTGTaGATCGCTATAATTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: NAPIAPLLPPSYPLHSKDWVSSL*IAIIFS Trigger: AGAGAAAATTATAGCGATCAACAGTGAACTTACCCA...ATCCTTGGAATGCAAAGGGTAGGAAGGGGGCAGAAGTGGGGCTATGGGAGCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CAA 90 bp | TCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTCAGAATCATTCCAATTTTCCAGAAGCACCTaGCCTAAGAAACCAGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SHTLYRHGPRPETSESFQFSRST*PKKPVA Trigger: AGCCACTGGTTTCTTAGGCAAGGTGCTTCTGGAAAA...TTGGAATGATTCTGAAGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CAA 90 bp | ATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTCAGAAGAGAGCCAGTTTAGGTaGGGTAAGTTCACTGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: IMVSHTLYRHGPRPETSEESQFR*GKFTVD Trigger: ATCAACAGTGAACTTACCCAACCTAAACTGGCTCTC...TTCTGAAGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CAA 90 bp | CACACCATCATGGTCTCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTTCCAGATTCTTCATTaGCTGTGCAAGGAGAATAAG | + |
|
Preference number: 5 (lower is better) Translates to: HTIMVSHTLYRHGPRPETFQILH*LCKENK Trigger: CTTATTCTCCTTGCACAGCAAATGAAGAATCTGGAA...AGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGAGACCATGATGGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CAA 90 bp | TCCCCTCCCACTACCAAGCTTTGTCTGGCAGACTGGAGAAACACTTATTCTATGTTCCAGATTCTTCATTaGCTGTGCAAGGAGAATAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPPTTKLCLADWRNTYSMFQILH*LCKENK Trigger: CTTATTCTCCTTGCACAGCAAATGAAGAATCTGGAA...CATAGAATAAGTGTTTCTCCAGTCTGCCAGACAAAGCTTGGTAGTGGGAGGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 |
||
| CDS-3UTR CAA 90 bp | CATAATAATGCATGTTCATATGGGGCAAGTCCTGTGGGAAAATTTATAAGGAGGTCTGCAAGGGCATTGTaGGAGGCACGCATTGTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: HNNACSYGASPVGKFIRRSARAL*EARIVR Trigger: TCGAACAATGCGTGCCTCCAACAATGCCCTTGCAGA...CCTCCTTATAAATTTTCCCACAGGACTTGCCCCATATGAACATGCATTATTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CAA 90 bp | TCTCACACCTTATACAGGCATGGTCCTAGACCAGAGACTTCAGAATCATTCCAATTGTTTTCATCATCCTaGGGCTTCTTCCAGTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SHTLYRHGPRPETSESFQLFSSS*GFFQSS Trigger: GGATGACTGGAAGAAGCCCAAGGATGATGAAAACAA...TTGGAATGATTCTGAAGTCTCTGGTCTAGGACCATGCCTGTATAAGGTGTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CAA 90 bp | CATAATAATGCATGTTCATATGGGGCAAGTCCTGTGGGAAAATTTATAAGGAGGAGATCTGCAAGGGCATaGTTGGAGGCACGCATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: HNNACSYGASPVGKFIRRRSARA*LEARIV Trigger: AACAATGCGTGCCTCCAACAATGCCCTTGCAGATCT...CCTCCTTATAAATTTTCCCACAGGACTTGCCCCATATGAACATGCATTATTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS GCA 90 bp | GCATACGCTGTTGAGACATGCATGAACACTTCCAGATTCTTCATTTaGTGTGCAAGGAGAATAAGCTGTCGTGTAGCTATCACATTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: AYAVETCMNTSRFFI*CARRISCRVAITFN Trigger: GTTAAATGTGATAGCTACACGACAGCTTATTCTCCTTGCACAGCAAATGAAGAATCTGGAAGTGTTCATGCATGTCTCAACAGCGTATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000129087.8 ENSMUST00000136158.8 ENSMUST00000164745.8 |
||
| CDS-3UTR CAA 90 bp | TCCAAACTCTTACAATATGACTTGAATGCAAGTGTAGCTGATAAAGCTCAACGCTGGCAACATTTAGCTTaGCTCCTTCCTGCTGCACAA | + |
|
Preference number: 5 (lower is better) Translates to: SKLLQYDLNASVADKAQRWQHLA*LLPAAQ Trigger: TTGTGCAGCAGGAAGGAGCAAAGCTAAATGTTGCCA...GCGTTGAGCTTTATCAGCTACACTTGCATTCAAGTCATATTGTAAGAGTTTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CAA 90 bp | CATAATAATGCATGTTCATATGGGGCAAGTCCTGTGGGAAAATTTATAAGGAGGTGGCAACATTTAGCTTaGCTCCTTCCTGCTGCACAA | + |
|
Preference number: 5 (lower is better) Translates to: HNNACSYGASPVGKFIRRWQHLA*LLPAAQ Trigger: TTGTGCAGCAGGAAGGAGCAAAGCTAAATGTTGCCA...CCTCCTTATAAATTTTCCCACAGGACTTGCCCCATATGAACATGCATTATTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS TCA 90 bp | AACTACTTCATCAATATGCTTTCGATTGCAGTAGGCATACGCTGTTaGGACATGCATGAACACTTCCAGATTCTTCATTTGCTGTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: NYFINMLSIAVGIRC*DMHEHFQILHLLCK Trigger: CTTGCACAGCAAATGAAGAATCTGGAAGTGTTCATGCATGTCTCAACAGCGTATGCCTACTGCAATCGAAAGCATATTGATGAAGTAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000129087.8 ENSMUST00000136158.8 ENSMUST00000164745.8 |
||
| CDS-3UTR CAA 90 bp | CATAATAATGCATGTTCATATGGGGCAAGTCCTGTGGGAAAATTTATAAGGAGGGAGAGCCAGTTTAGGTaGGGTAAGTTCACTGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: HNNACSYGASPVGKFIRRESQFR*GKFTVD Trigger: ATCAACAGTGAACTTACCCAACCTAAACTGGCTCTC...CCTCCTTATAAATTTTCCCACAGGACTTGCCCCATATGAACATGCATTATTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CAA 90 bp | TCCAAACTCTTACAATATGACTTGAATGCAAGTGTAGCTGATAAAGCTCAACGCTTGTTTTCATCATCCTaGGGCTTCTTCCAGTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SKLLQYDLNASVADKAQRLFSSS*GFFQSS Trigger: GGATGACTGGAAGAAGCCCAAGGATGATGAAAACAA...GCGTTGAGCTTTATCAGCTACACTTGCATTCAAGTCATATTGTAAGAGTTTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033018.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CAA 90 bp | TCCAAACTCTTACAATATGACTTGAATGCAAGTGTAGCTGATAAAGCTCAACGCTGGGTAAGTTCACTGTaGATCGCTATAATTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SKLLQYDLNASVADKAQRWVSSL*IAIIFS Trigger: AGAGAAAATTATAGCGATCAACAGTGAACTTACCCA...GCGTTGAGCTTTATCAGCTACACTTGCATTCAAGTCATATTGTAAGAGTTTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS-3UTR CAA 90 bp | CATAATAATGCATGTTCATATGGGGCAAGTCCTGTGGGAAAATTTATAAGGAGGTGGGTAAGTTCACTGTaGATCGCTATAATTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HNNACSYGASPVGKFIRRWVSSL*IAIIFS Trigger: AGAGAAAATTATAGCGATCAACAGTGAACTTACCCA...CCTCCTTATAAATTTTCCCACAGGACTTGCCCCATATGAACATGCATTATTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000164745.8 |
||
| CDS CCA 90 bp | TCTATAATGATCTCCTTATCTTCTTCACTGAGAGCCAGTTTAGGTTaGGTAAGTTCACTGTTGATCGCTATAATTTTCTCTCTAAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: SIMISLSSSLRASLG*VSSLLIAIIFSLKS Trigger: AGATTTTAGAGAGAAAATTATAGCGATCAACAGTGAACTTACCCAACCTAAACTGGCTCTCAGTGAAGAAGATAAGGAGATCATTATAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000129087.8 ENSMUST00000136158.8 ENSMUST00000164745.8 |
||
| CDS TCA 72 bp | CCAGAAGCACCTTGCCTAAGAAACCAGTGGCTCCTGTaGGAAGGATATTCTTCCCCTCGTAGTATTCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PEAPCLRNQWLL*EGYSSPRSILG Trigger: TCCCAGAATACTACGAGGGGAAGAATATCCTTCTCACAGGAGCCACTGGTTTCTTAGGCAAGGTGCTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000122890.2 ENSMUST00000129087.8 ENSMUST00000136158.8 ENSMUST00000164745.8 |
||
| CDS TCA 72 bp | TTCGATTGCAGTAGGCATACGCTGTTGAGACATGCATaGACACTTCCAGATTCTTCATTTGCTGTGCAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: FDCSRHTLLRHA*TLPDSSFAVQG Trigger: TCCTTGCACAGCAAATGAAGAATCTGGAAGTGTTCATGCATGTCTCAACAGCGTATGCCTACTGCAATCGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000129087.8 ENSMUST00000136158.8 ENSMUST00000164745.8 |
||
| CDS TCA 72 bp | TTGTTTTCATCATCCACGGTTTCTGACCTGTCAACCTaGGAGCAAGATCGAGCAATAATGCAGGTACTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: LFSSSTVSDLST*EQDRAIMQVLY Trigger: ATACAGTACCTGCATTATTGCTCGATCTTGCTCTCAGGTTGACAGGTCAGAAACCGTGGATGATGAAAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067929.15 |
||
| CDS TCA 72 bp | GAGCAAGATCGAGCAATAATGCAGGTACTGTATGTTTaGCACCCTTCCAATAATGAAGCATTAGGTTGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: EQDRAIMQVLYV*HPSNNEALGCW Trigger: CCAACAACCTAATGCTTCATTATTGGAAGGGTGTCAAACATACAGTACCTGCATTATTGCTCGATCTTGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067929.15 |
||
| CDS TCA 72 bp | ATCAATATGCTTTCGATTGCAGTAGGCATACGCTGTTaGGACATGCATGAACACTTCCAGATTCTTCATTTG | + |
|
Preference number: 6 (lower is better) Translates to: INMLSIAVGIRC*DMHEHFQILHL Trigger: CAAATGAAGAATCTGGAAGTGTTCATGCATGTCTCAACAGCGTATGCCTACTGCAATCGAAAGCATATTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000129087.8 ENSMUST00000136158.8 ENSMUST00000164745.8 |
||
| CDS CAA 72 bp | GATCTCCTTATCTTCTTCACTGAGAGCCAGTTTAGGTaGGGTAAGTTCACTGTTGATCGCTATAATTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: DLLIFFTESQFR*GKFTVDRYNFL Trigger: GAGAAAATTATAGCGATCAACAGTGAACTTACCCAACCTAAACTGGCTCTCAGTGAAGAAGATAAGGAGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000129087.8 ENSMUST00000136158.8 ENSMUST00000164745.8 |
||
| CDS CAA 72 bp | TCACTGAGAGCCAGTTTAGGTTGGGTAAGTTCACTGTaGATCGCTATAATTTTCTCTCTAAAATCTGGATTT | + |
|
Preference number: 6 (lower is better) Translates to: SLRASLGWVSSL*IAIIFSLKSGF Trigger: AAATCCAGATTTTAGAGAGAAAATTATAGCGATCAACAGTGAACTTACCCAACCTAAACTGGCTCTCAGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000129087.8 ENSMUST00000136158.8 ENSMUST00000164745.8 |
||
| CDS CAA 90 bp | ATCTATAATGATCTCCTTATCTTCTTCACTGAGAGCCAGTTTAGGTaGGGTAAGTTCACTGTTGATCGCTATAATTTTCTCTCTAAAATC | + |
|
Preference number: 6 (lower is better) Translates to: IYNDLLIFFTESQFR*GKFTVDRYNFLSKI Trigger: GATTTTAGAGAGAAAATTATAGCGATCAACAGTGAACTTACCCAACCTAAACTGGCTCTCAGTGAAGAAGATAAGGAGATCATTATAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033018.15 ENSMUST00000067929.15 ENSMUST00000129087.8 ENSMUST00000136158.8 ENSMUST00000164745.8 |
||