Pregenerated sensors for FAP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000392Ensembl transcript IDs: ENSMUST00000000402.16, ENSMUST00000102732.10, ENSMUST00000128139.3, ENSMUST00000173745.2, ENSMUST00000174234.8, ENSMUST00000174448.8
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCTGGGAGCGCCCAGATGATATACCATGGTTCTGGTCAGAGTACCACATCGCCTTCCAAGTCGTCCATGTaGAGCCTTCAGACTGTCCTA | + |
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Preference number: 2 (lower is better) Translates to: SGSAQMIYHGSGQSTTSPSKSSM*SLQTVL Trigger: TAGGACAGTCTGAAGGCTTCACATGGACGACTTGGA...AGGCGATGTGGTACTCTGACCAGAACCATGGTATATCATCTGGGCGCTCCCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128139.3 |
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| 3UTR-3UTR TCA 90 bp | TCTGGGAGCGCCCAGATGATATACCATGGTTCTGGTCAGAGTACCACATCGCCTAAGTGCACATTATCCTaGGCACAGGCAAAGGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: SGSAQMIYHGSGQSTTSPKCTLS*AQAKED Trigger: ATCCTCCTTTGCCTGTGCTCAGGATAATGTGCACTT...AGGCGATGTGGTACTCTGACCAGAACCATGGTATATCATCTGGGCGCTCCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128139.3 |
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| 3UTR TCA 72 bp | CGGCTTTTACAATATTCATGGTCCAAGTCGTCCATGTaGAGCCTTCAGACTGTCCTACACGCTAGTACTTGC | + |
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Preference number: 3 (lower is better) Translates to: RLLQYSWSKSSM*SLQTVLHASTC Trigger: GCAAGTACTAGCGTGTAGGACAGTCTGAAGGCTTCACATGGACGACTTGGACCATGAATATTGTAAAAGCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| 3UTR TCA 72 bp | CACTTGTGCATTAACCAAAGCTTTAGCAATCTGTGCTaGGTTCTGAAAGTGCACATTATCCTGAGCACAGGC | + |
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Preference number: 3 (lower is better) Translates to: HLCINQSFSNLC*VLKVHIILSTG Trigger: GCCTGTGCTCAGGATAATGTGCACTTTCAGAACTCAGCACAGATTGCTAAAGCTTTGGTTAATGCACAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128139.3 |
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| CDS-3UTR CCA 90 bp | GGTCCAAGTCGTCCATGTGAAGCCTTCAGACTGTCCTACACGCTAGTACTTGCATTCCCAGCTGGAGACTaGAGCCACTGCTATGCCACA | + |
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Preference number: 4 (lower is better) Translates to: GPSRPCEAFRLSYTLVLAFPAGD*SHCYAT Trigger: TGTGGCATAGCAGTGGCTCCAGTCTCCAGCTGGGAA...TGCAAGTACTAGCGTGTAGGACAGTCTGAAGGCTTCACATGGACGACTTGGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR CCA 90 bp | CCAAGTCGTCCATGTGAAGCCTTCAGACTGTCCTACACGCTAGTACTTGCATTGAACTGGCACTTCCATTaGGCCCACGTGGTGAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PSRPCEAFRLSYTLVLALNWHFH*AHVVRV Trigger: TACCCTCACCACGTGGGCCCAATGGAAGTGCCAGTT...CAATGCAAGTACTAGCGTGTAGGACAGTCTGAAGGCTTCACATGGACGACTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR TCA 90 bp | CATGGTCCAAGTCGTCCATGTGAAGCCTTCAGACTGTCCTACACGCTAGTACTTGACCAGCATAGATACTaGATTGGACGAGGGAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: HGPSRPCEAFRLSYTLVLDQHRY*IGRGSS Trigger: CGAGCTCCCTCGTCCAATTCAGTATCTATGCTGGTC...AAGTACTAGCGTGTAGGACAGTCTGAAGGCTTCACATGGACGACTTGGACCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR CCA 90 bp | CCAAGTCGTCCATGTGAAGCCTTCAGACTGTCCTACACGCTAGTACTTGCATTGCGTAATATTCCCAGCTaGAGACTGGAGCCACTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PSRPCEAFRLSYTLVLALRNIPS*RLEPLL Trigger: TAGCAGTGGCTCCAGTCTCCAGCTGGGAATATTACG...CAATGCAAGTACTAGCGTGTAGGACAGTCTGAAGGCTTCACATGGACGACTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR GCA 90 bp | GGTCCAAGTCGTCCATGTGAAGCCTTCAGACTGTCCTACACGCTAGTACTTGCAAGGACTGAGACATTCTaGACTCTTTTTAGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GPSRPCEAFRLSYTLVLARTETF*TLFSHC Trigger: GCAGTGGCTAAAAAGAGTGCAGAATGTCTCAGTCCT...TGCAAGTACTAGCGTGTAGGACAGTCTGAAGGCTTCACATGGACGACTTGGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR CCA 90 bp | CCTAAATTTTTAGCGGCTTTTACAATATTCATGGTCCAAGTCGTCCATGTGAAGGGCCATCATGGAGGGTaGAAATGGGGAGGCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: PKFLAAFTIFMVQVVHVKGHHGG*KWGGQG Trigger: GCCCTGGCCTCCCCATTTCCACCCTCCATGATGGCC...CTTCACATGGACGACTTGGACCATGAATATTGTAAAAGCCGCTAAAAATTTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR CCA 90 bp | GGTCCAAGTCGTCCATGTGAAGCCTTCAGACTGTCCTACACGCTAGTACTTGCACTGACAGCTGTGAGCTaGTCCTCAACTTCATATACA | + |
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Preference number: 4 (lower is better) Translates to: GPSRPCEAFRLSYTLVLALTAVS*SSTSYT Trigger: TGTATATGAAGTTGAGGACCAGCTCACAGCTGTCAG...TGCAAGTACTAGCGTGTAGGACAGTCTGAAGGCTTCACATGGACGACTTGGACC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR TCA 90 bp | TTTCCGCTACCCGGCAATGAACAGGTGATAAAACATTGTGTCCAAAGCAAGATGTGCAAGGGCCAGGGATaGAACATAACCTCCGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: FPLPGNEQVIKHCVQSKMCKGQG*NITSVG Trigger: TCCTACGGAGGTTATGTTTCATCCCTGGCCCTTGCA...CATCTTGCTTTGGACACAATGTTTTATCACCTGTTCATTGCCGGGTAGCGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR TCA 90 bp | CCAAGTCGTCCATGTGAAGCCTTCAGACTGTCCTACACGCTAGTACTTGCATTGCTGCTATGCCACATTTaGAAAGACCAGTTCCAGATG | + |
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Preference number: 4 (lower is better) Translates to: PSRPCEAFRLSYTLVLALLLCHI*KDQFQM Trigger: CATCTGGAACTGGTCTTTTCAAATGTGGCATAGCAG...CAATGCAAGTACTAGCGTGTAGGACAGTCTGAAGGCTTCACATGGACGACTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR GCA 90 bp | GGTCCAAGTCGTCCATGTGAAGCCTTCAGACTGTCCTACACGCTAGTACTTGCACTGCTTTCTTCTACATaGTCCTGGTTCTTTGGACAT | + |
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Preference number: 4 (lower is better) Translates to: GPSRPCEAFRLSYTLVLALLSST*SWFFGH Trigger: ATGTCCAAAGAACCAGGAGCATGTAGAAGAAAGCAG...TGCAAGTACTAGCGTGTAGGACAGTCTGAAGGCTTCACATGGACGACTTGGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR GCA 90 bp | CCAAGTCGTCCATGTGAAGCCTTCAGACTGTCCTACACGCTAGTACTTGCATTGTTTCGATACACGGCATaGAGGAATTTGTCACCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PSRPCEAFRLSYTLVLALFRYTA*RNLSPW Trigger: CCAAGGTGACAAATTCCTGCATGCCGTGTATCGAAA...CAATGCAAGTACTAGCGTGTAGGACAGTCTGAAGGCTTCACATGGACGACTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR CCA 90 bp | AATGAACAGGTGATAAAACATTGTGTCCAAAGCAAGATGTGTGGCTCCCCTTTTTCTGTGCGGCCATCATaGAGGGTGGAAATGGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: NEQVIKHCVQSKMCGSPFSVRPS*RVEMGR Trigger: CCTCCCCATTTCCACCCTCCATGATGGCCGCACAGA...AAAAGGGGAGCCACACATCTTGCTTTGGACACAATGTTTTATCACCTGTTCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR CCA 90 bp | CCAGATGATATACCATGGTTCTGGTCAGAGTACCACATCGCCTGGAAATCCACTATTGTCGTCCTTTGTTaGGAGGCCCATGAATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PDDIPWFWSEYHIAWKSTIVVLC*EAHESL Trigger: GAGAGATTCATGGGCCTCCCAACAAAGGACGACAAT...AGTGGATTTCCAGGCGATGTGGTACTCTGACCAGAACCATGGTATATCATCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128139.3 |
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| CDS-3UTR TCA 90 bp | CCCGGCAATGAACAGGTGATAAAACATTGTGTCCAAAGCAAGATGTGTGGCTCCCAAAGGGTACTTCTTTaGTCTGTCAAACTGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGNEQVIKHCVQSKMCGSQRVLL*SVKLRR Trigger: CCTCCTCAGTTTGACAGATCAAAGAAGTACCCTTTG...GGAGCCACACATCTTGCTTTGGACACAATGTTTTATCACCTGTTCATTGCCGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR TCA 90 bp | CCCGGCAATGAACAGGTGATAAAACATTGTGTCCAAAGCAAGATGTGTGGCTCCGGACCACCATACACTTaGATTAGCAAAGGGTACTTC | + |
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Preference number: 4 (lower is better) Translates to: PGNEQVIKHCVQSKMCGSGPPYT*ISKGYF Trigger: GAAGTACCCTTTGCTAATTCAAGTGTATGGTGGTCC...GGAGCCACACATCTTGCTTTGGACACAATGTTTTATCACCTGTTCATTGCCGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR TCA 90 bp | TCTGGGAGCGCCCAGATGATATACCATGGTTCTGGTCAGAGTACCACATCGCCTTCTTGCCATCACAGTTaGATTTTTATAGTGTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGSAQMIYHGSGQSTTSPSCHHS*IFIVFE Trigger: CTCGAACACTATAAAAATTCAACTGTGATGGCAAGA...AGGCGATGTGGTACTCTGACCAGAACCATGGTATATCATCTGGGCGCTCCCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128139.3 |
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| CDS-3UTR GCA 90 bp | AAATTTTTAGCGGCTTTTACAATATTCATGGTCCAAGTCGTCCATGTGAAGCCTCACCTTGGAAAGCAGTaGCCCGACCATCTACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KFLAAFTIFMVQVVHVKPHLGKQ*PDHLPG Trigger: CCCTGGTAGATGGTCGGGGCACTGCTTTCCAAGGTG...AGGCTTCACATGGACGACTTGGACCATGAATATTGTAAAAGCCGCTAAAAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR CCA 90 bp | CCCGGCAATGAACAGGTGATAAAACATTGTGTCCAAAGCAAGATGTGTGGCTCCGAGTACCACATCGCCTaGAAATCCACTTGTGCATTA | + |
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Preference number: 4 (lower is better) Translates to: PGNEQVIKHCVQSKMCGSEYHIA*KSTCAL Trigger: TAATGCACAAGTGGATTTCCAGGCGATGTGGTACTC...GGAGCCACACATCTTGCTTTGGACACAATGTTTTATCACCTGTTCATTGCCGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR CCA 90 bp | TTTCCGCTACCCGGCAATGAACAGGTGATAAAACATTGTGTCCAAAGCAAGATGGATATACCATGGTTCTaGTCAGAGTACCACATCGCC | + |
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Preference number: 4 (lower is better) Translates to: FPLPGNEQVIKHCVQSKMDIPWF*SEYHIA Trigger: GGCGATGTGGTACTCTGACCAGAACCATGGTATATC...CATCTTGCTTTGGACACAATGTTTTATCACCTGTTCATTGCCGGGTAGCGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR TCA 90 bp | CCAAGTCGTCCATGTGAAGCCTTCAGACTGTCCTACACGCTAGTACTTGCATTGGATAGTCTACATTTCTaGAATATTCTGCTCTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: PSRPCEAFRLSYTLVLALDSLHF*NILLLP Trigger: TGGCAAGAGCAGAATATTTCAGAAATGTAGACTATC...CAATGCAAGTACTAGCGTGTAGGACAGTCTGAAGGCTTCACATGGACGACTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102732.10 ENSMUST00000128139.3 |
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| CDS-3UTR GCA 90 bp | TTTTACAATATTCATGGTCCAAGTCGTCCATGTGAAGCCTTCAGACTGTCCTACCAGCCCATCCTGTTCTaGTTTCTTCTACATGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: FYNIHGPSRPCEAFRLSYQPILF*FLLHAP Trigger: AGGAGCATGTAGAAGAAAGCAGAACAGGATGGGCTG...GTAGGACAGTCTGAAGGCTTCACATGGACGACTTGGACCATGAATATTGTAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR CCA 90 bp | CATGGTCCAAGTCGTCCATGTGAAGCCTTCAGACTGTCCTACACGCTAGTACTTCCCAGCCTTTGGATATaGAATATTTATAGTTCTAGG | + |
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Preference number: 4 (lower is better) Translates to: HGPSRPCEAFRLSYTLVLPSLWI*NIYSSR Trigger: CCTAGAACTATAAATATTCCATATCCAAAGGCTGGG...AAGTACTAGCGTGTAGGACAGTCTGAAGGCTTCACATGGACGACTTGGACCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR CCA 90 bp | TTATTTCCGCTACCCGGCAATGAACAGGTGATAAAACATTGTGTCCAAAGCAAGTATCATTTCTGGAACTaGCACTTCCATTGGGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: LFPLPGNEQVIKHCVQSKYHFWN*HFHWAH Trigger: GTGGGCCCAATGGAAGTGCCAGTTCCAGAAATGATA...CTTGCTTTGGACACAATGTTTTATCACCTGTTCATTGCCGGGTAGCGGAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR CCA 90 bp | AATATTCATGGTCCAAGTCGTCCATGTGAAGCCTTCAGACTGTCCTACACGCTAAATACTTGTATTTCTTaGTCTGTGCGGCCATCATGG | + |
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Preference number: 4 (lower is better) Translates to: NIHGPSRPCEAFRLSYTLNTCIS*SVRPSW Trigger: CCATGATGGCCGCACAGACCAAGAAATACAAGTATT...TAGCGTGTAGGACAGTCTGAAGGCTTCACATGGACGACTTGGACCATGAATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR CCA 90 bp | CTCCTGAGCCCTCCTAAATTTTTAGCGGCTTTTACAATATTCATGGTCCAAGTCACAGACTTAACACTCTaGCTGCAAGGACCACCATAC | + |
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Preference number: 4 (lower is better) Translates to: LLSPPKFLAAFTIFMVQVTDLTL*LQGPPY Trigger: GTATGGTGGTCCTTGCAGCCAGAGTGTTAAGTCTGT...GACTTGGACCATGAATATTGTAAAAGCCGCTAAAAATTTAGGAGGGCTCAGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR CCA 90 bp | TTTTACAATATTCATGGTCCAAGTCGTCCATGTGAAGCCTTCAGACTGTCCTACATTGTCGTCCTTTGTTaGGAGGCCCATGAATCTCTC | + |
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Preference number: 4 (lower is better) Translates to: FYNIHGPSRPCEAFRLSYIVVLC*EAHESL Trigger: GAGAGATTCATGGGCCTCCCAACAAAGGACGACAAT...GTAGGACAGTCTGAAGGCTTCACATGGACGACTTGGACCATGAATATTGTAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| 3UTR CAA 72 bp | GAAGCCTTCAGACTGTCCTACACGCTAGTACTTGCATaGGTTCAGTCTGATAAAGAAAAGCATTGCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: EAFRLSYTLVLA*VQSDKEKHCLR Trigger: CCTCAAGCAATGCTTTTCTTTATCAGACTGAACCAATGCAAGTACTAGCGTGTAGGACAGTCTGAAGGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128139.3 |
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| CDS-3UTR TCA 90 bp | CTCCTGAGCCCTCCTAAATTTTTAGCGGCTTTTACAATATTCATGGTCCAAGTCCTGCTGTTCCGTGGATaGGAAGATAGTCTACATTTC | + |
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Preference number: 4 (lower is better) Translates to: LLSPPKFLAAFTIFMVQVLLFRG*EDSLHF Trigger: GAAATGTAGACTATCTTCTCATCCACGGAACAGCAG...GACTTGGACCATGAATATTGTAAAAGCCGCTAAAAATTTAGGAGGGCTCAGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR TCA 90 bp | TCTGAAAGTGCACATTATCCTGAGCACAGGCAAAGGAGGATGCTTAATGTTTCTCTGCTGTTCCGTGGATaGGAAGATAGTCTACATTTC | + |
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Preference number: 4 (lower is better) Translates to: SESAHYPEHRQRRMLNVSLLFRG*EDSLHF Trigger: GAAATGTAGACTATCTTCTCATCCACGGAACAGCAG...AGAAACATTAAGCATCCTCCTTTGCCTGTGCTCAGGATAATGTGCACTTTCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128139.3 |
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| CDS-3UTR TCA 90 bp | TACAATATTCATGGTCCAAGTCGTCCATGTGAAGCCTTCAGACTGTCCTACACGTTTAGCAATCTGTGCTaGGTTCTGAAAGTGCACATT | + |
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Preference number: 4 (lower is better) Translates to: YNIHGPSRPCEAFRLSYTFSNLC*VLKVHI Trigger: AATGTGCACTTTCAGAACTCAGCACAGATTGCTAAA...CGTGTAGGACAGTCTGAAGGCTTCACATGGACGACTTGGACCATGAATATTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR GCA 90 bp | TACAATATTCATGGTCCAAGTCGTCCATGTGAAGCCTTCAGACTGTCCTACACGTCTAGATACACAAATTaGCGATCAGGTGACAAACCA | + |
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Preference number: 4 (lower is better) Translates to: YNIHGPSRPCEAFRLSYTSRYTN*RSGDKP Trigger: TGGTTTGTCACCTGATCGGCAATTTGTGTATCTAGA...CGTGTAGGACAGTCTGAAGGCTTCACATGGACGACTTGGACCATGAATATTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR GCA 90 bp | AGCCCTCCTAAATTTTTAGCGGCTTTTACAATATTCATGGTCCAAGTCGTCCATGGACATTCCCATGCATaGCAGTCTTCCCTGAAATCA | + |
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Preference number: 4 (lower is better) Translates to: SPPKFLAAFTIFMVQVVHGHSHA*QSSLKS Trigger: TGATTTCAGGGAAGACTGGCATGCATGGGAATGTCC...ATGGACGACTTGGACCATGAATATTGTAAAAGCCGCTAAAAATTTAGGAGGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR GCA 90 bp | TCTGAAAGTGCACATTATCCTGAGCACAGGCAAAGGAGGATGCTTAATGTTTCTTTAAACCTCACCATCTaGTGTTCCGTGGATGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SESAHYPEHRQRRMLNVSLNLTI*CSVDEK Trigger: CTTCTCATCCACGGAACAGCAGATGGTGAGGTTTAA...AGAAACATTAAGCATCCTCCTTTGCCTGTGCTCAGGATAATGTGCACTTTCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128139.3 |
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| CDS-3UTR CCA 90 bp | CCTAAATTTTTAGCGGCTTTTACAATATTCATGGTCCAAGTCGTCCATGTGAAGAGGAATTTGTCACCTTaGAAAGCAGTGCCCCGACCA | + |
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Preference number: 4 (lower is better) Translates to: PKFLAAFTIFMVQVVHVKRNLSP*KAVPRP Trigger: TGGTCGGGGCACTGCTTTCCAAGGTGACAAATTCCT...CTTCACATGGACGACTTGGACCATGAATATTGTAAAAGCCGCTAAAAATTTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR CCA 90 bp | CTCCTGAGCCCTCCTAAATTTTTAGCGGCTTTTACAATATTCATGGTCCAAGTCCCAGATGATATACCATaGTTCTGGTCAGAGTACCAC | + |
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Preference number: 4 (lower is better) Translates to: LLSPPKFLAAFTIFMVQVPDDIP*FWSEYH Trigger: GTGGTACTCTGACCAGAACCATGGTATATCATCTGG...GACTTGGACCATGAATATTGTAAAAGCCGCTAAAAATTTAGGAGGGCTCAGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR TCA 90 bp | AATATTCATGGTCCAAGTCGTCCATGTGAAGCCTTCAGACTGTCCTACACGCTAACTTGGCTTTGTAGCTaGAACTTGCTGTGTAATATT | + |
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Preference number: 4 (lower is better) Translates to: NIHGPSRPCEAFRLSYTLTWLCS*NLLCNI Trigger: AATATTACACAGCAAGTTTCAGCTACAAAGCCAAGT...TAGCGTGTAGGACAGTCTGAAGGCTTCACATGGACGACTTGGACCATGAATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR TCA 90 bp | TTATTTCCGCTACCCGGCAATGAACAGGTGATAAAACATTGTGTCCAAAGCAAGGCCCATGAATCTCTCTaGGTAGATAGATGCGTAATA | + |
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Preference number: 4 (lower is better) Translates to: LFPLPGNEQVIKHCVQSKAHESL*VDRCVI Trigger: TATTACGCATCTATCTACTCAGAGAGATTCATGGGC...CTTGCTTTGGACACAATGTTTTATCACCTGTTCATTGCCGGGTAGCGGAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR TCA 90 bp | CTACCCGGCAATGAACAGGTGATAAAACATTGTGTCCAAAGCAAGATGTGTGGCTCTTGCCATCACAGTTaGATTTTTATAGTGTTCGAG | + |
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Preference number: 4 (lower is better) Translates to: LPGNEQVIKHCVQSKMCGSCHHS*IFIVFE Trigger: CTCGAACACTATAAAAATTCAACTGTGATGGCAAGA...GCCACACATCTTGCTTTGGACACAATGTTTTATCACCTGTTCATTGCCGGGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR GCA 90 bp | AAATTTTTAGCGGCTTTTACAATATTCATGGTCCAAGTCGTCCATGTGAAGCCTGGAGACTGGAGCCACTaGTATGCCACATTTGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: KFLAAFTIFMVQVVHVKPGDWSH*YATFEK Trigger: CTTTTCAAATGTGGCATAGCAGTGGCTCCAGTCTCC...AGGCTTCACATGGACGACTTGGACCATGAATATTGTAAAAGCCGCTAAAAATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR CCA 90 bp | CTACCCGGCAATGAACAGGTGATAAAACATTGTGTCCAAAGCAAGATGTGTGGCCAAAAATTTTCCATCTaGAGACCACCAAAGAGCATA | + |
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Preference number: 4 (lower is better) Translates to: LPGNEQVIKHCVQSKMCGQKFSI*RPPKSI Trigger: TATGCTCTTTGGTGGTCTCCAGATGGAAAATTTTTG...GCCACACATCTTGCTTTGGACACAATGTTTTATCACCTGTTCATTGCCGGGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR CCA 90 bp | TTTTACAATATTCATGGTCCAAGTCGTCCATGTGAAGCCTTCAGACTGTCCTACTCTTCTACATGCTCCTaGTTCTTTGGACATTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: FYNIHGPSRPCEAFRLSYSSTCS*FFGHSH Trigger: ATGGGAATGTCCAAAGAACCAGGAGCATGTAGAAGA...GTAGGACAGTCTGAAGGCTTCACATGGACGACTTGGACCATGAATATTGTAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR TCA 90 bp | CTCCTGAGCCCTCCTAAATTTTTAGCGGCTTTTACAATATTCATGGTCCAAGTCACATATAGACAGGACTaGGACATTCTGCACTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLSPPKFLAAFTIFMVQVTYRQD*DILHSF Trigger: AAAAGAGTGCAGAATGTCTCAGTCCTGTCTATATGT...GACTTGGACCATGAATATTGTAAAAGCCGCTAAAAATTTAGGAGGGCTCAGGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
||
| CDS-3UTR TCA 90 bp | AGCCCTCCTAAATTTTTAGCGGCTTTTACAATATTCATGGTCCAAGTCGTCCATTTTGATCTGTCAAACTaGGGAGGCAGAATCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPPKFLAAFTIFMVQVVHFDLSN*GGRIIL Trigger: CAAGATGATTCTGCCTCCTCAGTTTGACAGATCAAA...ATGGACGACTTGGACCATGAATATTGTAAAAGCCGCTAAAAATTTAGGAGGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
||
| CDS-3UTR TCA 90 bp | CTCCTGAGCCCTCCTAAATTTTTAGCGGCTTTTACAATATTCATGGTCCAAGTCATCTGTGCTGAGTTCTaGAAGTGCACATTATCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSPPKFLAAFTIFMVQVICAEF*KCTLSS Trigger: AGATGATAATGTGCACTTTCAGAACTCAGCACAGAT...GACTTGGACCATGAATATTGTAAAAGCCGCTAAAAATTTAGGAGGGCTCAGGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR TCA 90 bp | CCTAAATTTTTAGCGGCTTTTACAATATTCATGGTCCAAGTCGTCCATGTGAAGATGTGGGTATATAAATaGTTCTGGGAGCGCCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PKFLAAFTIFMVQVVHVKMWVYK*FWERPD Trigger: ATCTGGGCGCTCCCAGAATCATTTATATACCCACAT...CTTCACATGGACGACTTGGACCATGAATATTGTAAAAGCCGCTAAAAATTTAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
||
| CDS-3UTR GCA 90 bp | AAATTTTTAGCGGCTTTTACAATATTCATGGTCCAAGTCGTCCATGTGAAGCCTGCCATAGCAGACGAGTaGATAGTACTTGGCTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KFLAAFTIFMVQVVHVKPAIADE*IVLGFV Trigger: TACAAAGCCAAGTACTATGCACTCGTCTGCTATGGC...AGGCTTCACATGGACGACTTGGACCATGAATATTGTAAAAGCCGCTAAAAATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR GCA 90 bp | AAATTTTTAGCGGCTTTTACAATATTCATGGTCCAAGTCGTCCATGTGAAGCCTGTGCACATTATCATCTaGTGTTCCGTGGATGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KFLAAFTIFMVQVVHVKPVHIII*CSVDEK Trigger: CTTCTCATCCACGGAACAGCAGATGATAATGTGCAC...AGGCTTCACATGGACGACTTGGACCATGAATATTGTAAAAGCCGCTAAAAATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
||
| CDS-3UTR GCA 90 bp | TTTTACAATATTCATGGTCCAAGTCGTCCATGTGAAGCCTTCAGACTGTCCTACCTGGAAATCCACTTGTaGATTAACCAAAGCTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FYNIHGPSRPCEAFRLSYLEIHL*INQSFS Trigger: GCTAAAGCTTTGGTTAATGCACAAGTGGATTTCCAG...GTAGGACAGTCTGAAGGCTTCACATGGACGACTTGGACCATGAATATTGTAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR CCA 90 bp | TTTCCGCTACCCGGCAATGAACAGGTGATAAAACATTGTGTCCAAAGCAAGATGCTTTCTTTCCTTAGATaGCAAGTAACACACTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FPLPGNEQVIKHCVQSKMLSFLR*QVTHFL Trigger: CAAGAAGTGTGTTACTTGCCATCTAAGGAAAGAAAG...CATCTTGCTTTGGACACAATGTTTTATCACCTGTTCATTGCCGGGTAGCGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
||
| CDS-3UTR TCA 90 bp | TCTGAAAGTGCACATTATCCTGAGCACAGGCAAAGGAGGATGCTTAATGTTTCTGATAGTCTACATTTCTaGAATATTCTGCTCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SESAHYPEHRQRRMLNVSDSLHF*NILLLP Trigger: TGGCAAGAGCAGAATATTTCAGAAATGTAGACTATC...AGAAACATTAAGCATCCTCCTTTGCCTGTGCTCAGGATAATGTGCACTTTCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128139.3 |
||
| CDS-3UTR GCA 90 bp | AGCCCTCCTAAATTTTTAGCGGCTTTTACAATATTCATGGTCCAAGTCGTCCATAGGGACGTAAGACAATaGATATCACCACTAAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SPPKFLAAFTIFMVQVVHRDVRQ*ISPLKQ Trigger: TTGCTTTAGTGGTGATATGCATTGTCTTACGTCCCT...ATGGACGACTTGGACCATGAATATTGTAAAAGCCGCTAAAAATTTAGGAGGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR CCA 90 bp | TTTTACAATATTCATGGTCCAAGTCGTCCATGTGAAGCCTTCAGACTGTCCTACCTTAGCCCCAGCCTTTaGATATGGAATATTTATAGT | + |
|
Preference number: 4 (lower is better) Translates to: FYNIHGPSRPCEAFRLSYLSPSL*IWNIYS Trigger: ACTATAAATATTCCATATCCAAAGGCTGGGGCTAAG...GTAGGACAGTCTGAAGGCTTCACATGGACGACTTGGACCATGAATATTGTAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
||
| CDS-3UTR CCA 90 bp | TTTTACAATATTCATGGTCCAAGTCGTCCATGTGAAGCCTTCAGACTGTCCTACTCCACTTTAGGCAGCTaGATATTTCTCAGAGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: FYNIHGPSRPCEAFRLSYSTLGS*IFLREF Trigger: AAATTCTCTGAGAAATATCCAGCTGCCTAAAGTGGA...GTAGGACAGTCTGAAGGCTTCACATGGACGACTTGGACCATGAATATTGTAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
||
| CDS-3UTR GCA 90 bp | AAATTTTTAGCGGCTTTTACAATATTCATGGTCCAAGTCGTCCATGTGAAGCCTGATAAAGAAAAGCATTaGTTGAGGAAGTGCGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: KFLAAFTIFMVQVVHVKPDKEKH*LRKCVM Trigger: CATGACGCACTTCCTCAAGCAATGCTTTTCTTTATC...AGGCTTCACATGGACGACTTGGACCATGAATATTGTAAAAGCCGCTAAAAATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
||
| CDS CCA 90 bp | CTTCTAATACTTGTATTTCTTGGTCTGTGCGGCCATCATGGAGGGTaGAAATGGGGAGGCCAGGGCCATAGCAGACGAGTGCATAGTACT | + |
|
Preference number: 5 (lower is better) Translates to: LLILVFLGLCGHHGG*KWGGQGHSRRVHST Trigger: AGTACTATGCACTCGTCTGCTATGGCCCTGGCCTCCCCATTTCCACCCTCCATGATGGCCGCACAGACCAAGAAATACAAGTATTAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
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| CDS CCA 90 bp | TATACACCCAGTTTTCGATACACGGCATGCAGGAATTTGTCACCTTaGAAAGCAGTGCCCCGACCATCTACCAGGGCAATGACTATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: YTPSFRYTACRNLSP*KAVPRPSTRAMTIP Trigger: GGGGATAGTCATTGCCCTGGTAGATGGTCGGGGCACTGCTTTCCAAGGTGACAAATTCCTGCATGCCGTGTATCGAAAACTGGGTGTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
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| CDS TCA 90 bp | TCGTTCACTGGACACCCATGTGAGCCAGCTGAAATAATAGTCACTTaGGGCTATCATTTCTGGAACTGGCACTTCCATTGGGCCCACGTG | + |
|
Preference number: 5 (lower is better) Translates to: SFTGHPCEPAEIIVT*GYHFWNWHFHWAHV Trigger: CACGTGGGCCCAATGGAAGTGCCAGTTCCAGAAATGATAGCCTCAAGTGACTATTATTTCAGCTGGCTCACATGGGTGTCCAGTGAACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
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| CDS GCA 90 bp | AGCTGGTCCTCAACTTCATATACACCCAGTTTTCGATACACGGCATaGAGGAATTTGTCACCTTGGAAAGCAGTGCCCCGACCATCTACC | + |
|
Preference number: 5 (lower is better) Translates to: SWSSTSYTPSFRYTA*RNLSPWKAVPRPST Trigger: GGTAGATGGTCGGGGCACTGCTTTCCAAGGTGACAAATTCCTGCATGCCGTGTATCGAAAACTGGGTGTATATGAAGTTGAGGACCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
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| CDS TCA 90 bp | CGTAATATTCCCAGCTGGAGACTGGAGCCACTGCTATGCCACATTTaGAAAGACCAGTTCCAGATGCAAGGGCCAGGGATGAAACATAAC | + |
|
Preference number: 5 (lower is better) Translates to: RNIPSWRLEPLLCHI*KDQFQMQGPGMKHN Trigger: GTTATGTTTCATCCCTGGCCCTTGCATCTGGAACTGGTCTTTTCAAATGTGGCATAGCAGTGGCTCCAGTCTCCAGCTGGGAATATTACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
||
| CDS-3UTR CAA 90 bp | AATATTCATGGTCCAAGTCGTCCATGTGAAGCCTTCAGACTGTCCTACACGCTACATGCTCCTGGTTCTTaGGACATTCCCATGCATGCC | + |
|
Preference number: 5 (lower is better) Translates to: NIHGPSRPCEAFRLSYTLHAPGS*DIPMHA Trigger: GGCATGCATGGGAATGTCCAAAGAACCAGGAGCATG...TAGCGTGTAGGACAGTCTGAAGGCTTCACATGGACGACTTGGACCATGAATATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS TCA 90 bp | GGCCAGGGCCATAGCAGACGAGTGCATAGTACTTGGCTTTGTAGCTaGAACTTGCTGTGTAATATTGGCACCTTTCTTTCCTTAGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: GQGHSRRVHSTWLCS*NLLCNIGTFLSLDG Trigger: GCCATCTAAGGAAAGAAAGGTGCCAATATTACACAGCAAGTTTCAGCTACAAAGCCAAGTACTATGCACTCGTCTGCTATGGCCCTGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
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| CDS TCA 90 bp | TATGCCACATTTGAAAAGACCAGTTCCAGATGCAAGGGCCAGGGATaGAACATAACCTCCGTAGGACCAGCCCCATATGGCTATTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: YATFEKTSSRCKGQG*NITSVGPAPYGYSF Trigger: GAAAGAATAGCCATATGGGGCTGGTCCTACGGAGGTTATGTTTCATCCCTGGCCCTTGCATCTGGAACTGGTCTTTTCAAATGTGGCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
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| CDS-3UTR CAA 90 bp | CCGCTACCCGGCAATGAACAGGTGATAAAACATTGTGTCCAAAGCAAGATGTGTGGAGGCAGAATCATCTaGTACCAGAAAGTCAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PLPGNEQVIKHCVQSKMCGGRII*YQKVSP Trigger: GGGACTGACTTTCTGGTACAAGATGATTCTGCCTCC...ACACATCTTGCTTTGGACACAATGTTTTATCACCTGTTCATTGCCGGGTAGCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
||
| CDS-3UTR CAA 90 bp | CTCCTGAGCCCTCCTAAATTTTTAGCGGCTTTTACAATATTCATGGTCCAAGTCCAGGAATTTGTCACCTaGGAAAGCAGTGCCCCGACC | + |
|
Preference number: 5 (lower is better) Translates to: LLSPPKFLAAFTIFMVQVQEFVT*ESSAPT Trigger: GGTCGGGGCACTGCTTTCCAAGGTGACAAATTCCTG...GACTTGGACCATGAATATTGTAAAAGCCGCTAAAAATTTAGGAGGGCTCAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR CAA 90 bp | GGTCCAAGTCGTCCATGTGAAGCCTTCAGACTGTCCTACACGCTAGTACTTGCAACTGCTATGCCACATTaGAAAAGACCAGTTCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GPSRPCEAFRLSYTLVLATAMPH*KRPVPD Trigger: ATCTGGAACTGGTCTTTTCAAATGTGGCATAGCAGT...TGCAAGTACTAGCGTGTAGGACAGTCTGAAGGCTTCACATGGACGACTTGGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS GCA 90 bp | TCACATATAGACAGGACTGAGACATTCTGCACTCTTTTTAGCCACTaGAAGCATACTCGTTCACTGGACACCCATGTGAGCCAGCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SHIDRTETFCTLFSH*KHTRSLDTHVSQLK Trigger: TTTCAGCTGGCTCACATGGGTGTCCAGTGAACGAGTATGCTTGCAGTGGCTAAAAAGAGTGCAGAATGTCTCAGTCCTGTCTATATGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
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| CDS GCA 90 bp | TGCCAGTCTTCCCTGAAATCACATATAGACAGGACTGAGACATTCTaGACTCTTTTTAGCCACTGCAAGCATACTCGTTCACTGGACACC | + |
|
Preference number: 5 (lower is better) Translates to: CQSSLKSHIDRTETF*TLFSHCKHTRSLDT Trigger: GGTGTCCAGTGAACGAGTATGCTTGCAGTGGCTAAAAAGAGTGCAGAATGTCTCAGTCCTGTCTATATGTGATTTCAGGGAAGACTGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
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| CDS-3UTR CAA 90 bp | GGTCCAAGTCGTCCATGTGAAGCCTTCAGACTGTCCTACACGCTAGTACTTGCAACCAAAGAGCATATTTaGTGGCAAGCATTTCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GPSRPCEAFRLSYTLVLATKEHI*WQAFPL Trigger: AAGAGGAAATGCTTGCCACAAAATATGCTCTTTGGT...TGCAAGTACTAGCGTGTAGGACAGTCTGAAGGCTTCACATGGACGACTTGGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR CAA 90 bp | AATATTCATGGTCCAAGTCGTCCATGTGAAGCCTTCAGACTGTCCTACACGCTAGCAAAGGGTACTTCTTaGATCTGTCAAACTGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: NIHGPSRPCEAFRLSYTLAKGTS*ICQTEE Trigger: CTCCTCAGTTTGACAGATCAAAGAAGTACCCTTTGC...TAGCGTGTAGGACAGTCTGAAGGCTTCACATGGACGACTTGGACCATGAATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS TCA 90 bp | TATACATATGCTAATTTACTCCCAACAGGCGACCAGCATAGATACTaGATTGGACGAGGGAGCTCGTATCCTCTTACAAATTCCCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: YTYANLLPTGDQHRY*IGRGSSYPLTNSPF Trigger: GAATGGGGAATTTGTAAGAGGATACGAGCTCCCTCGTCCAATTCAGTATCTATGCTGGTCGCCTGTTGGGAGTAAATTAGCATATGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
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| CDS-3UTR CAA 90 bp | AGCCCTCCTAAATTTTTAGCGGCTTTTACAATATTCATGGTCCAAGTCGTCCATCAAGTAACACACTTCTaGCTCGGAGGAGAGTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPPKFLAAFTIFMVQVVHQVTHF*LGGEFP Trigger: TGGAAACTCTCCTCCGAGCAAGAAGTGTGTTACTTG...ATGGACGACTTGGACCATGAATATTGTAAAAGCCGCTAAAAATTTAGGAGGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR CAA 90 bp | GAGCCTAACCTCCTGAGCCCTCCTAAATTTTTAGCGGCTTTTACAATATTCATGAAAGAAAAGCATTGCTaGAGGAAGTGCGTCATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: EPNLLSPPKFLAAFTIFMKEKHC*RKCVMW Trigger: CCACATGACGCACTTCCTCAAGCAATGCTTTTCTTT...CATGAATATTGTAAAAGCCGCTAAAAATTTAGGAGGGCTCAGGAGGTTAGGCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR CAA 90 bp | TTTCCGCTACCCGGCAATGAACAGGTGATAAAACATTGTGTCCAAAGCAAGATGTCCAGTATAAGTTATTaGAAAAGGTGGATCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FPLPGNEQVIKHCVQSKMSSISY*KRWISW Trigger: CCAGGAGATCCACCTTTTCAAATAACTTATACTGGA...CATCTTGCTTTGGACACAATGTTTTATCACCTGTTCATTGCCGGGTAGCGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR CAA 90 bp | CCGCTACCCGGCAATGAACAGGTGATAAAACATTGTGTCCAAAGCAAGATGTGTCTCTTGCCATCACAGTaGAATTTTTATAGTGTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: PLPGNEQVIKHCVQSKMCLLPSQ*NFYSVR Trigger: TCGAACACTATAAAAATTCAACTGTGATGGCAAGAG...ACACATCTTGCTTTGGACACAATGTTTTATCACCTGTTCATTGCCGGGTAGCGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR CAA 90 bp | TTATTTCCGCTACCCGGCAATGAACAGGTGATAAAACATTGTGTCCAAAGCAAGCTTGCCACTTGTAATTaGAATAGCATTTTCCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: LFPLPGNEQVIKHCVQSKLATCN*NSIFHS Trigger: ACTGTGGAAAATGCTATTCAAATTACAAGTGGCAAG...CTTGCTTTGGACACAATGTTTTATCACCTGTTCATTGCCGGGTAGCGGAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102732.10 |
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| CDS-3UTR CAA 90 bp | AGTTCTGAAAGTGCACATTATCCTGAGCACAGGCAAAGGAGGATGCTTAATGTTCTCTTGCCATCACAGTaGAATTTTTATAGTGTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: SSESAHYPEHRQRRMLNVLLPSQ*NFYSVR Trigger: TCGAACACTATAAAAATTCAACTGTGATGGCAAGAG...AACATTAAGCATCCTCCTTTGCCTGTGCTCAGGATAATGTGCACTTTCAGAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128139.3 |
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| CDS CCA 72 bp | CTTGTATTTCTTGGTCTGTGCGGCCATCATGGAGGGTaGAAATGGGGAGGCCAGGGCCATAGCAGACGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LVFLGLCGHHGG*KWGGQGHSRRV Trigger: CACTCGTCTGCTATGGCCCTGGCCTCCCCATTTCCACCCTCCATGATGGCCGCACAGACCAAGAAATACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
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| CDS CAA 72 bp | TCCCAGCTGGAGACTGGAGCCACTGCTATGCCACATTaGAAAAGACCAGTTCCAGATGCAAGGGCCAGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SQLETGATAMPH*KRPVPDARARD Trigger: ATCCCTGGCCCTTGCATCTGGAACTGGTCTTTTCAAATGTGGCATAGCAGTGGCTCCAGTCTCCAGCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
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| CDS GCA 72 bp | GGTGGAAATGGGGAGGCCAGGGCCATAGCAGACGAGTaGATAGTACTTGGCTTTGTAGCTGAAACTTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GGNGEARAIADE*IVLGFVAETCC Trigger: ACAGCAAGTTTCAGCTACAAAGCCAAGTACTATGCACTCGTCTGCTATGGCCCTGGCCTCCCCATTTCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
||
| CDS TCA 72 bp | CTTGGAAAGCAGTGCCCCGACCATCTACCAGGGCAATaGCTATCCCCTCCTTACTTGCGAGATAAGTTATCC | + |
|
Preference number: 6 (lower is better) Translates to: LGKQCPDHLPGQ*LSPPYLRDKLS Trigger: GGATAACTTATCTCGCAAGTAAGGAGGGGATAGTCATTGCCCTGGTAGATGGTCGGGGCACTGCTTTCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
||
| CDS TCA 72 bp | TTTGAAAAGACCAGTTCCAGATGCAAGGGCCAGGGATaGAACATAACCTCCGTAGGACCAGCCCCATATGGC | + |
|
Preference number: 6 (lower is better) Translates to: FEKTSSRCKGQG*NITSVGPAPYG Trigger: GCCATATGGGGCTGGTCCTACGGAGGTTATGTTTCATCCCTGGCCCTTGCATCTGGAACTGGTCTTTTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
||
| CDS CCA 72 bp | AGTTTTCGATACACGGCATGCAGGAATTTGTCACCTTaGAAAGCAGTGCCCCGACCATCTACCAGGGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: SFRYTACRNLSP*KAVPRPSTRAM Trigger: CATTGCCCTGGTAGATGGTCGGGGCACTGCTTTCCAAGGTGACAAATTCCTGCATGCCGTGTATCGAAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
||
| CDS CAA 90 bp | ATATACACCCAGTTTTCGATACACGGCATGCAGGAATTTGTCACCTaGGAAAGCAGTGCCCCGACCATCTACCAGGGCAATGACTATCCC | + |
|
Preference number: 6 (lower is better) Translates to: IYTQFSIHGMQEFVT*ESSAPTIYQGNDYP Trigger: GGGATAGTCATTGCCCTGGTAGATGGTCGGGGCACTGCTTTCCAAGGTGACAAATTCCTGCATGCCGTGTATCGAAAACTGGGTGTATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
||
| CDS GCA 72 bp | GACAGGACTGAGACATTCTGCACTCTTTTTAGCCACTaGAAGCATACTCGTTCACTGGACACCCATGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: DRTETFCTLFSH*KHTRSLDTHVS Trigger: GCTCACATGGGTGTCCAGTGAACGAGTATGCTTGCAGTGGCTAAAAAGAGTGCAGAATGTCTCAGTCCTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
||
| CDS GCA 72 bp | CTCTCTTTGTGTTTCCTCTTGAGGGACGTAAGACAATaGATATCACCACTAAAGCAAGCGCAGCCAGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LSLCFLLRDVRQ*ISPLKQAQPGW Trigger: CCACCCTGGCTGCGCTTGCTTTAGTGGTGATATGCATTGTCTTACGTCCCTCAAGAGGAAACACAAAGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174448.8 |
||
| CDS GCA 72 bp | AGATGCGTAATATTCCCAGCTGGAGACTGGAGCCACTaGTATGCCACATTTGAAAAGACCAGTTCCAGATGC | + |
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Preference number: 6 (lower is better) Translates to: RCVIFPAGDWSH*YATFEKTSSRC Trigger: GCATCTGGAACTGGTCTTTTCAAATGTGGCATAGCAGTGGCTCCAGTCTCCAGCTGGGAATATTACGCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
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| CDS GCA 72 bp | CTTCAGGTTTGTAAACTCTTGAGGGACGTAAGACAATaGATATCACCACTAAAGCAAGCGCAGCCAGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: LQVCKLLRDVRQ*ISPLKQAQPGW Trigger: CCACCCTGGCTGCGCTTGCTTTAGTGGTGATATGCATTGTCTTACGTCCCTCAAGAGTTTACAAACCTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102732.10 ENSMUST00000174234.8 |
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| CDS TCA 72 bp | GGACACCCATGTGAGCCAGCTGAAATAATAGTCACTTaGGGCTATCATTTCTGGAACTGGCACTTCCATTGG | + |
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Preference number: 6 (lower is better) Translates to: GHPCEPAEIIVT*GYHFWNWHFHW Trigger: CCAATGGAAGTGCCAGTTCCAGAAATGATAGCCTCAAGTGACTATTATTTCAGCTGGCTCACATGGGTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
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| CDS TCA 72 bp | ATTGTCGTCCTTTGTTGGGAGGCCCATGAATCTCTCTaGGTAGATAGATGCGTAATATTCCCAGCTGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: IVVLCWEAHESL*VDRCVIFPAGD Trigger: GTCTCCAGCTGGGAATATTACGCATCTATCTACTCAGAGAGATTCATGGGCCTCCCAACAAAGGACGACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
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| CDS GCA 72 bp | GAAGATATTCTTGTTCTCTTGAGGGACGTAAGACAATaGATATCACCACTAAAGCAAGCGCAGCCAGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: EDILVLLRDVRQ*ISPLKQAQPGW Trigger: CCACCCTGGCTGCGCTTGCTTTAGTGGTGATATGCATTGTCTTACGTCCCTCAAGAGAACAAGAATATCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000402.16 |
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| CDS CAA 72 bp | ATTTACTCCCAACAGGCGACCAGCATAGATACTGAATaGGACGAGGGAGCTCGTATCCTCTTACAAATTCCC | + |
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Preference number: 6 (lower is better) Translates to: IYSQQATSIDTE*DEGARILLQIP Trigger: GGGAATTTGTAAGAGGATACGAGCTCCCTCGTCCAATTCAGTATCTATGCTGGTCGCCTGTTGGGAGTAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
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| CDS TCA 72 bp | GCTAATTTACTCCCAACAGGCGACCAGCATAGATACTaGATTGGACGAGGGAGCTCGTATCCTCTTACAAAT | + |
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Preference number: 6 (lower is better) Translates to: ANLLPTGDQHRY*IGRGSSYPLTN Trigger: ATTTGTAAGAGGATACGAGCTCCCTCGTCCAATTCAGTATCTATGCTGGTCGCCTGTTGGGAGTAAATTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
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| CDS GCA 72 bp | TCTACATGCTCCTGGTTCTTTGGACATTCCCATGCATaGCAGTCTTCCCTGAAATCACATATAGACAGGACT | + |
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Preference number: 6 (lower is better) Translates to: STCSWFFGHSHA*QSSLKSHIDRT Trigger: AGTCCTGTCTATATGTGATTTCAGGGAAGACTGGCATGCATGGGAATGTCCAAAGAACCAGGAGCATGTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
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| CDS GCA 72 bp | GTGTCGAAACAAAGAATCCACCAGCCCATCCTGTTCTaGTTTCTTCTACATGCTCCTGGTTCTTTGGACATT | + |
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Preference number: 6 (lower is better) Translates to: VSKQRIHQPILF*FLLHAPGSLDI Trigger: AATGTCCAAAGAACCAGGAGCATGTAGAAGAAAGCAGAACAGGATGGGCTGGTGGATTCTTTGTTTCGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
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| CDS CAA 90 bp | CATATGCTAATTTACTCCCAACAGGCGACCAGCATAGATACTGAATaGGACGAGGGAGCTCGTATCCTCTTACAAATTCCCCATTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: HMLIYSQQATSIDTE*DEGARILLQIPHSE Trigger: TTCAGAATGGGGAATTTGTAAGAGGATACGAGCTCCCTCGTCCAATTCAGTATCTATGCTGGTCGCCTGTTGGGAGTAAATTAGCATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
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| CDS CCA 72 bp | TATTTTGTAGTAAGAAGTGGCATCCTGGCTAAAAGCTaGTGTCGAAACAAAGAATCCACCAGCCCATCCTGT | + |
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Preference number: 6 (lower is better) Translates to: YFVVRSGILAKS*CRNKESTSPSC Trigger: ACAGGATGGGCTGGTGGATTCTTTGTTTCGACACCAGCTTTTAGCCAGGATGCCACTTCTTACTACAAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
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| CDS CAA 72 bp | AGAATCATCTTGTACCAGAAAGTCAGTCCCCCGTCTTaGAGCTTCTTAATCTCCACTTTAGGCAGCTGGATA | + |
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Preference number: 6 (lower is better) Translates to: RIILYQKVSPPS*SFLISTLGSWI Trigger: TATCCAGCTGCCTAAAGTGGAGATTAAGAAGCTCAAAGACGGGGGACTGACTTTCTGGTACAAGATGATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
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| CDS GCA 72 bp | TCCCTGAAATCACATATAGACAGGACTGAGACATTCTaGACTCTTTTTAGCCACTGCAAGCATACTCGTTCA | + |
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Preference number: 6 (lower is better) Translates to: SLKSHIDRTETF*TLFSHCKHTRS Trigger: TGAACGAGTATGCTTGCAGTGGCTAAAAAGAGTGCAGAATGTCTCAGTCCTGTCTATATGTGATTTCAGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
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| CDS CAA 72 bp | GAGCTCTCTTTGTGTTTCCTTCAGGTTTGTAAACTCTaGAGGGACGTAAGACAATGCATATCACCACTAAAG | + |
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Preference number: 6 (lower is better) Translates to: ELSLCFLQVCKL*RDVRQCISPLK Trigger: CTTTAGTGGTGATATGCATTGTCTTACGTCCCTCAAGAGTTTACAAACCTGAAGGAAACACAAAGAGAGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102732.10 ENSMUST00000174234.8 |
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| CDS CAA 90 bp | GGTCGTAGATGTAGTATGTCGCTGTGTATGAATATCGCCAGAGCTTaGAATAATCACTTTCTAGATACACAAATTGCCGATCAGGTGACA | + |
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Preference number: 6 (lower is better) Translates to: GRRCSMSLCMNIARA*NNHFLDTQIADQVT Trigger: TGTCACCTGATCGGCAATTTGTGTATCTAGAAAGTGATTATTCAAAGCTCTGGCGATATTCATACACAGCGACATACTACATCTACGACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000173745.2 ENSMUST00000174448.8 |
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| CDS CCA 72 bp | AAACCCATTTCTATGAATTTTCTGACAGCTGTGAGCTaGTCCTCAACTTCATATACACCCAGTTTTCGATAC | + |
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Preference number: 6 (lower is better) Translates to: KPISMNFLTAVS*SSTSYTPSFRY Trigger: GTATCGAAAACTGGGTGTATATGAAGTTGAGGACCAGCTCACAGCTGTCAGAAAATTCATAGAAATGGGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000174234.8 ENSMUST00000174448.8 |
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| CDS CAA 72 bp | TGTAGTATGTCGCTGTGTATGAATATCGCCAGAGCTTaGAATAATCACTTTCTAGATACACAAATTGCCGAT | + |
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Preference number: 6 (lower is better) Translates to: CSMSLCMNIARA*NNHFLDTQIAD Trigger: ATCGGCAATTTGTGTATCTAGAAAGTGATTATTCAAAGCTCTGGCGATATTCATACACAGCGACATACTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000402.16 ENSMUST00000102732.10 ENSMUST00000173745.2 ENSMUST00000174448.8 |
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