Pregenerated sensors for FANK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053111Ensembl transcript IDs: ENSMUST00000065359.12, ENSMUST00000121560.2, ENSMUST00000151031.2, ENSMUST00000209511.2, ENSMUST00000211077.2
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGAGCCCCGCCCGCCGCAGGAGGCAACAGCAGCCTGGCCTGCAGTaGGGTGGGAGAGATAATAAGAAACACATGAGTGGAAGGTGCCAG | + |
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Preference number: 1 (lower is better) Translates to: RSPARRRRQQQPGLQ*GGRDNKKHMSGRCQ Trigger: CTGGCACCTTCCACTCATGTGTTTCTTATTATCTCTCCCACCCCACTGCAGGCCAGGCTGCTGTTGCCTCCTGCGGCGGGCGGGGCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| 3UTR GCA 90 bp | CTGCAGTGGGGTGGGAGAGATAATAAGAAACACATGAGTGGAAGGTaGCAGGAGGCCTGGAGCATCTCGAGGACAGCTAAGGGGAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: LQWGGRDNKKHMSGR*QEAWSISRTAKGKG Trigger: CCCCTTCCCCTTAGCTGTCCTCGAGATGCTCCAGGCCTCCTGGCACCTTCCACTCATGTGTTTCTTATTATCTCTCCCACCCCACTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| 3UTR CCA 90 bp | GGTCCTTTCACCACAGAGGTGAGCATGGGCAGACACATGAACCGATaGACCTGCCCTCGCAGCCCTGTCCTTCAACTAAACACTGCAAAC | + |
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Preference number: 1 (lower is better) Translates to: GPFTTEVSMGRHMNR*TCPRSPVLQLNTAN Trigger: GTTTGCAGTGTTTAGTTGAAGGACAGGGCTGCGAGGGCAGGTCCATCGGTTCATGTGTCTGCCCATGCTCACCTCTGTGGTGAAAGGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| 3UTR GCA 90 bp | TTCACCACAGAGGTGAGCATGGGCAGACACATGAACCGATGGACCTaGCCTCGCAGCCCTGTCCTTCAACTAAACACTGCAAACAGAACC | + |
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Preference number: 1 (lower is better) Translates to: FTTEVSMGRHMNRWT*PRSPVLQLNTANRT Trigger: GGTTCTGTTTGCAGTGTTTAGTTGAAGGACAGGGCTGCGAGGGCAGGTCCATCGGTTCATGTGTCTGCCCATGCTCACCTCTGTGGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| 3UTR TCA 90 bp | ATGAACCAGTTTGTCCCTGGAAACACAAGATGCACATGTTTCTGCTaGTGTTTAAGCTTGGTCCAGCTAAAACTTCCCACATTTCTATCT | + |
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Preference number: 1 (lower is better) Translates to: MNQFVPGNTRCTCFC*CLSLVQLKLPTFLS Trigger: AGATAGAAATGTGGGAAGTTTTAGCTGGACCAAGCTTAAACATCAGCAGAAACATGTGCATCTTGTGTTTCCAGGGACAAACTGGTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| 3UTR-3UTR CCA 90 bp | ACCACAGAGGTGAGCATGGGCAGACACATGAACCGATGGACCTGCCCTCGCAGCAAGGGGAGACAGGGGTaGGGACCCATGCACTCTCGT | + |
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Preference number: 2 (lower is better) Translates to: TTEVSMGRHMNRWTCPRSKGRQG*GPMHSR Trigger: ACGAGAGTGCATGGGTCCCCACCCCTGTCTCCCCTT...GCTGCGAGGGCAGGTCCATCGGTTCATGTGTCTGCCCATGCTCACCTCTGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| 3UTR-3UTR CCA 90 bp | TTCACCACAGAGGTGAGCATGGGCAGACACATGAACCGATGGACCTGCCCTCGCCTAAGAGGGAACTCCTaGGTGCTTAGGAGGAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: FTTEVSMGRHMNRWTCPRLRGNS*VLRRSP Trigger: GGGGCTCCTCCTAAGCACCCAGGAGTTCCCTCTTAG...GCGAGGGCAGGTCCATCGGTTCATGTGTCTGCCCATGCTCACCTCTGTGGTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| 3UTR-3UTR GCA 90 bp | ACCACAGAGGTGAGCATGGGCAGACACATGAACCGATGGACCTGCCCTCGCAGCGGTTTTGTGTCTAACTaGAAAAGGCACAGGGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: TTEVSMGRHMNRWTCPRSGFVSN*KRHRAR Trigger: TCTTGCCCTGTGCCTTTTGCAGTTAGACACAAAACC...GCTGCGAGGGCAGGTCCATCGGTTCATGTGTCTGCCCATGCTCACCTCTGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| 3UTR-3UTR CCA 90 bp | CACCACAGAGGTGAGCATGGGCAGACACATGAACCGATGGACCTGCCCTCGCAGAGATGTATTTCAATGTaGGAAGAGTTGCCCATTACA | + |
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Preference number: 2 (lower is better) Translates to: HHRGEHGQTHEPMDLPSQRCISM*EELPIT Trigger: TGTAATGGGCAACTCTTCCCACATTGAAATACATCT...CTGCGAGGGCAGGTCCATCGGTTCATGTGTCTGCCCATGCTCACCTCTGTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| 3UTR-3UTR CCA 90 bp | GTCCTTCAACTAAACACTGCAAACAGAACCACGCCAGCCTACACATATGTATTCCAGCCTGGCCTGCAGTaGGGTGGGAGAGATAATAAG | + |
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Preference number: 2 (lower is better) Translates to: VLQLNTANRTTPAYTYVFQPGLQ*GGRDNK Trigger: CTTATTATCTCTCCCACCCCACTGCAGGCCAGGCTG...GAATACATATGTGTAGGCTGGCGTGGTTCTGTTTGCAGTGTTTAGTTGAAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| 3UTR-3UTR TCA 90 bp | CCCTGTCCTTCAACTAAACACTGCAAACAGAACCACGCCAGCCTACACATATGTATAATAAGAAACACATaGGTGGAAGGTGCCAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: PCPSTKHCKQNHASLHICIIRNT*VEGARR Trigger: CCTCCTGGCACCTTCCACTCATGTGTTTCTTATTAT...ACATATGTGTAGGCTGGCGTGGTTCTGTTTGCAGTGTTTAGTTGAAGGACAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| 3UTR-3UTR GCA 90 bp | CCCTGTCCTTCAACTAAACACTGCAAACAGAACCACGCCAGCCTACACATATGTCAATGTGGGAAGAGTTaGCCATTACATAAAAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: PCPSTKHCKQNHASLHICQCGKS*PLHKSH Trigger: GTGACTTTTATGTAATGGGCAACTCTTCCCACATTG...ACATATGTGTAGGCTGGCGTGGTTCTGTTTGCAGTGTTTAGTTGAAGGACAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| 3UTR CCA 72 bp | GCCCGCCGCAGGAGGCAACAGCAGCCTGGCCTGCAGTaGGGTGGGAGAGATAATAAGAAACACATGAGTGGA | + |
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Preference number: 3 (lower is better) Translates to: ARRRRQQQPGLQ*GGRDNKKHMSG Trigger: TCCACTCATGTGTTTCTTATTATCTCTCCCACCCCACTGCAGGCCAGGCTGCTGTTGCCTCCTGCGGCGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| 3UTR-3UTR CAA 90 bp | CACCACAGAGGTGAGCATGGGCAGACACATGAACCGATGGACCTGCCCTCGCAGCCCGGTGGTCACAGTTaGCTGTTCTCTCAAGTCGGT | + |
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Preference number: 3 (lower is better) Translates to: HHRGEHGQTHEPMDLPSQPGGHS*LFSQVG Trigger: ACCGACTTGAGAGAACAGCAAACTGTGACCACCGGG...CTGCGAGGGCAGGTCCATCGGTTCATGTGTCTGCCCATGCTCACCTCTGTGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| 3UTR GCA 72 bp | GAGGTGAGCATGGGCAGACACATGAACCGATGGACCTaGCCTCGCAGCCCTGTCCTTCAACTAAACACTGCA | + |
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Preference number: 3 (lower is better) Translates to: EVSMGRHMNRWT*PRSPVLQLNTA Trigger: TGCAGTGTTTAGTTGAAGGACAGGGCTGCGAGGGCAGGTCCATCGGTTCATGTGTCTGCCCATGCTCACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| 3UTR CCA 72 bp | ACCACAGAGGTGAGCATGGGCAGACACATGAACCGATaGACCTGCCCTCGCAGCCCTGTCCTTCAACTAAAC | + |
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Preference number: 3 (lower is better) Translates to: TTEVSMGRHMNR*TCPRSPVLQLN Trigger: GTTTAGTTGAAGGACAGGGCTGCGAGGGCAGGTCCATCGGTTCATGTGTCTGCCCATGCTCACCTCTGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| 3UTR-3UTR CAA 90 bp | GAGGTGAGCATGGGCAGACACATGAACCGATGGACCTGCCCTCGCAGCCCTGTCCGTAAGTATTTGGTTTaGTGTCTAACTGCAAAAGGC | + |
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Preference number: 3 (lower is better) Translates to: EVSMGRHMNRWTCPRSPVRKYLV*CLTAKG Trigger: GCCTTTTGCAGTTAGACACAAAACCAAATACTTACG...GACAGGGCTGCGAGGGCAGGTCCATCGGTTCATGTGTCTGCCCATGCTCACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| 3UTR GCA 72 bp | GGTGGGAGAGATAATAAGAAACACATGAGTGGAAGGTaGCAGGAGGCCTGGAGCATCTCGAGGACAGCTAAG | + |
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Preference number: 3 (lower is better) Translates to: GGRDNKKHMSGR*QEAWSISRTAK Trigger: CTTAGCTGTCCTCGAGATGCTCCAGGCCTCCTGGCACCTTCCACTCATGTGTTTCTTATTATCTCTCCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| 3UTR-3UTR CAA 90 bp | TTCAATGTGGGAAGAGTTGCCCATTACATAAAAGTCACTGTGAATCTTCAACTACCCGGTGGTCACAGTTaGCTGTTCTCTCAAGTCGGT | + |
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Preference number: 3 (lower is better) Translates to: FNVGRVAHYIKVTVNLQLPGGHS*LFSQVG Trigger: ACCGACTTGAGAGAACAGCAAACTGTGACCACCGGG...TAGTTGAAGATTCACAGTGACTTTTATGTAATGGGCAACTCTTCCCACATTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
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| 3UTR CCA 72 bp | TGCTTTATTAGAAGGCTAAATGAACCAGTTTGTCCCTaGAAACACAAGATGCACATGTTTCTGCTGATGTTT | + |
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Preference number: 3 (lower is better) Translates to: CFIRRLNEPVCP*KHKMHMFLLMF Trigger: AAACATCAGCAGAAACATGTGCATCTTGTGTTTCCAGGGACAAACTGGTTCATTTAGCCTTCTAATAAAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| CDS-3UTR TCA 90 bp | AGGAGGAGCCCCGCCCGCCGCAGGAGGCAACAGCAGCCTGGCCTGCAGTGGGGTCAGCCCCAGCCTCGATaGGGAGTGAGGCCACCTTCT | + |
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Preference number: 4 (lower is better) Translates to: RRSPARRRRQQQPGLQWGQPQPR*GVRPPS Trigger: AGAAGGTGGCCTCACTCCTCATCGAGGCTGGGGCTG...ACCCCACTGCAGGCCAGGCTGCTGTTGCCTCCTGCGGCGGGCGGGGCTCCTCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| CDS-3UTR GCA 90 bp | AGGAGGAGCCCCGCCCGCCGCAGGAGGCAACAGCAGCCTGGCCTGCAGTGGGGTCCCAGTGCAGAGCTGTaGAGCCTCCGAGGTCTCGAG | + |
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Preference number: 4 (lower is better) Translates to: RRSPARRRRQQQPGLQWGPSAEL*SLRGLE Trigger: CTCGAGACCTCGGAGGCTGCACAGCTCTGCACTGGG...ACCCCACTGCAGGCCAGGCTGCTGTTGCCTCCTGCGGCGGGCGGGGCTCCTCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| CDS-3UTR CCA 90 bp | AGGAGGAGCCCCGCCCGCCGCAGGAGGCAACAGCAGCCTGGCCTGCAGTGGGGTTCAATCACAGAGCAATaGCCTCCATCTGCAGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: RRSPARRRRQQQPGLQWGSITEQ*PPSAAQ Trigger: CTGGGCTGCAGATGGAGGCCATTGCTCTGTGATTGA...ACCCCACTGCAGGCCAGGCTGCTGTTGCCTCCTGCGGCGGGCGGGGCTCCTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| CDS-3UTR GCA 90 bp | AGGAGGAGCCCCGCCCGCCGCAGGAGGCAACAGCAGCCTGGCCTGCAGTGGGGTTGCTCCTGTGGTCCTTaGCGTTTCTCTTTCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: RRSPARRRRQQQPGLQWGCSCGP*RFSFCS Trigger: GGAACAGAAAGAGAAACGGCAAGGACCACAGGAGCA...ACCCCACTGCAGGCCAGGCTGCTGTTGCCTCCTGCGGCGGGCGGGGCTCCTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| CDS-3UTR TCA 90 bp | AGGAGGAGCCCCGCCCGCCGCAGGAGGCAACAGCAGCCTGGCCTGCAGTGGGGTACACTGACAGCACGATaGAAGTGTTCGCTACTTATG | + |
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Preference number: 4 (lower is better) Translates to: RRSPARRRRQQQPGLQWGTLTAR*KCSLLM Trigger: CATAAGTAGCGAACACTTTCATCGTGCTGTCAGTGT...ACCCCACTGCAGGCCAGGCTGCTGTTGCCTCCTGCGGCGGGCGGGGCTCCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| CDS-3UTR GCA 90 bp | TTCACCACAGAGGTGAGCATGGGCAGACACATGAACCGATGGACCTGCCCTCGCTGTGATGAGTCACCTTaGCCACAACAGGAGGATGCG | + |
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Preference number: 4 (lower is better) Translates to: FTTEVSMGRHMNRWTCPRCDESP*PQQEDA Trigger: CGCATCCTCCTGTTGTGGGCAAGGTGACTCATCACA...GCGAGGGCAGGTCCATCGGTTCATGTGTCTGCCCATGCTCACCTCTGTGGTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| CDS-3UTR TCA 90 bp | TTCACCACAGAGGTGAGCATGGGCAGACACATGAACCGATGGACCTGCCCTCGCTTCCATCTTTGTCCTTaGTGTTCACGTCAGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: FTTEVSMGRHMNRWTCPRFHLCP*CSRQPQ Trigger: CTGGGGCTGACGTGAACATCAAGGACAAAGATGGAA...GCGAGGGCAGGTCCATCGGTTCATGTGTCTGCCCATGCTCACCTCTGTGGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| CDS-3UTR GCA 90 bp | CACCACAGAGGTGAGCATGGGCAGACACATGAACCGATGGACCTGCCCTCGCAGAACCACATGCCTTGTTaGATAACCCGTGTAAATGAC | + |
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Preference number: 4 (lower is better) Translates to: HHRGEHGQTHEPMDLPSQNHMPC*ITRVND Trigger: GTCATTTACACGGGTTATGCAACAAGGCATGTGGTT...CTGCGAGGGCAGGTCCATCGGTTCATGTGTCTGCCCATGCTCACCTCTGTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| CDS-3UTR CCA 90 bp | GAGGTGAGCATGGGCAGACACATGAACCGATGGACCTGCCCTCGCAGCCCTGTCTCACATCTGTGCCATTaGAAACTAGGATCTTCACAA | + |
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Preference number: 4 (lower is better) Translates to: EVSMGRHMNRWTCPRSPVSHLCH*KLGSSQ Trigger: TTGTGAAGATCCTAGTTTCCAATGGCACAGATGTGA...GACAGGGCTGCGAGGGCAGGTCCATCGGTTCATGTGTCTGCCCATGCTCACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| CDS-3UTR TCA 90 bp | ATAAATAAACACCTCGTCCTCAGAGATGCTGCACGTCACGTGTTCAGCCCGGTGCTCCAGAGGGGCTGGTaGCCTTCAGTCGAAATTTGT | + |
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Preference number: 4 (lower is better) Translates to: INKHLVLRDAARHVFSPVLQRGW*PSVEIC Trigger: ACAAATTTCGACTGAAGGTCACCAGCCCCTCTGGAG...CACCGGGCTGAACACGTGACGTGCAGCATCTCTGAGGACGAGGTGTTTATTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
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| CDS-3UTR GCA 90 bp | AGCCCTGTCCTTCAACTAAACACTGCAAACAGAACCACGCCAGCCTACACATATCCCACAACAGGAGGATaGGGCTTTGAGAGTGGCACG | + |
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Preference number: 4 (lower is better) Translates to: SPVLQLNTANRTTPAYTYPTTGG*GFESGT Trigger: CGTGCCACTCTCAAAGCCGCATCCTCCTGTTGTGGG...ATATGTGTAGGCTGGCGTGGTTCTGTTTGCAGTGTTTAGTTGAAGGACAGGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| CDS-3UTR GCA 90 bp | ATAAATAAACACCTCGTCCTCAGAGATGCTGCACGTCACGTGTTCAGCCCGGTGTGTGATGAGTCACCTTaGCCACAACAGGAGGATGCG | + |
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Preference number: 4 (lower is better) Translates to: INKHLVLRDAARHVFSPVCDESP*PQQEDA Trigger: CGCATCCTCCTGTTGTGGGCAAGGTGACTCATCACA...CACCGGGCTGAACACGTGACGTGCAGCATCTCTGAGGACGAGGTGTTTATTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
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| CDS-3UTR CCA 90 bp | CCCTGTCCTTCAACTAAACACTGCAAACAGAACCACGCCAGCCTACACATATGTAGTGAGGCCACCTTCTaGCTTCCTGTCACAGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: PCPSTKHCKQNHASLHICSEATF*LPVTAE Trigger: CTCCGCTGTGACAGGAAGCCAGAAGGTGGCCTCACT...ACATATGTGTAGGCTGGCGTGGTTCTGTTTGCAGTGTTTAGTTGAAGGACAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| CDS-3UTR TCA 90 bp | AGCCCTGTCCTTCAACTAAACACTGCAAACAGAACCACGCCAGCCTACACATATGTCTCCGGAGGTATTTaGCAACATCTAGGTGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: SPVLQLNTANRTTPAYTYVSGGI*QHLGAP Trigger: CGGGGCACCTAGATGTTGTCAAATACCTCCGGAGAC...ATATGTGTAGGCTGGCGTGGTTCTGTTTGCAGTGTTTAGTTGAAGGACAGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| CDS-3UTR TCA 90 bp | ATAAATAAACACCTCGTCCTCAGAGATGCTGCACGTCACGTGTTCAGCCCGGTGTTCCATCTTTGTCCTTaGTGTTCACGTCAGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: INKHLVLRDAARHVFSPVFHLCP*CSRQPQ Trigger: CTGGGGCTGACGTGAACATCAAGGACAAAGATGGAA...CACCGGGCTGAACACGTGACGTGCAGCATCTCTGAGGACGAGGTGTTTATTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
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| CDS-3UTR GCA 90 bp | TTCACCACAGAGGTGAGCATGGGCAGACACATGAACCGATGGACCTGCCCTCGCTCAGATTCACATCTGTaGCATTGGAAACTAGGATCT | + |
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Preference number: 4 (lower is better) Translates to: FTTEVSMGRHMNRWTCPRSDSHL*HWKLGS Trigger: AGATCCTAGTTTCCAATGGCACAGATGTGAATCTGA...GCGAGGGCAGGTCCATCGGTTCATGTGTCTGCCCATGCTCACCTCTGTGGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| CDS-3UTR TCA 90 bp | CCCTGTCCTTCAACTAAACACTGCAAACAGAACCACGCCAGCCTACACATATGTCTCCAGAGGGGCTGGTaGCCTTCAGTCGAAATTTGT | + |
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Preference number: 4 (lower is better) Translates to: PCPSTKHCKQNHASLHICLQRGW*PSVEIC Trigger: ACAAATTTCGACTGAAGGTCACCAGCCCCTCTGGAG...ACATATGTGTAGGCTGGCGTGGTTCTGTTTGCAGTGTTTAGTTGAAGGACAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| CDS-3UTR GCA 90 bp | TTCACCACAGAGGTGAGCATGGGCAGACACATGAACCGATGGACCTGCCCTCGCTTTCTAGGACACCTTTaGCAAACTCATTTTTCACAG | + |
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Preference number: 4 (lower is better) Translates to: FTTEVSMGRHMNRWTCPRFLGHL*QTHFSQ Trigger: CTGTGAAAAATGAGTTTGGCAAAGGTGTCCTAGAAA...GCGAGGGCAGGTCCATCGGTTCATGTGTCTGCCCATGCTCACCTCTGTGGTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| CDS-3UTR TCA 90 bp | CAATGTGGGAAGAGTTGCCCATTACATAAAAGTCACTGTGAATCTTCAACTAAACAGCCCCAGCCTCGATaGGGAGTGAGGCCACCTTCT | + |
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Preference number: 4 (lower is better) Translates to: QCGKSCPLHKSHCESSTKQPQPR*GVRPPS Trigger: AGAAGGTGGCCTCACTCCTCATCGAGGCTGGGGCTG...TTTAGTTGAAGATTCACAGTGACTTTTATGTAATGGGCAACTCTTCCCACATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
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| CDS-3UTR GCA 90 bp | TTCAATGTGGGAAGAGTTGCCCATTACATAAAAGTCACTGTGAATCTTCAACTACCCAGTGCAGAGCTGTaGAGCCTCCGAGGTCTCGAG | + |
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Preference number: 4 (lower is better) Translates to: FNVGRVAHYIKVTVNLQLPSAEL*SLRGLE Trigger: CTCGAGACCTCGGAGGCTGCACAGCTCTGCACTGGG...TAGTTGAAGATTCACAGTGACTTTTATGTAATGGGCAACTCTTCCCACATTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
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| CDS-3UTR GCA 90 bp | TTCAATGTGGGAAGAGTTGCCCATTACATAAAAGTCACTGTGAATCTTCAACTACCATCTGCAGCCCAGTaGAGAGCTGTGCAGCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: FNVGRVAHYIKVTVNLQLPSAAQ*RAVQPP Trigger: CGGAGGCTGCACAGCTCTGCACTGGGCTGCAGATGG...TAGTTGAAGATTCACAGTGACTTTTATGTAATGGGCAACTCTTCCCACATTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
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| CDS-3UTR CCA 90 bp | ATAAATAAACACCTCGTCCTCAGAGATGCTGCACGTCACGTGTTCAGCCCGGTGACGTCAATCATGACATaGCCTCCTTCCAAAATTCGA | + |
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Preference number: 4 (lower is better) Translates to: INKHLVLRDAARHVFSPVTSIMT*PPSKIR Trigger: TCGAATTTTGGAAGGAGGCCATGTCATGATTGACGT...CACCGGGCTGAACACGTGACGTGCAGCATCTCTGAGGACGAGGTGTTTATTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
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| CDS-3UTR CCA 90 bp | ATAAATAAACACCTCGTCCTCAGAGATGCTGCACGTCACGTGTTCAGCCCGGTGGTCTGTCAAAAACTCTaGCCATTTCTAGGACACCTT | + |
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Preference number: 4 (lower is better) Translates to: INKHLVLRDAARHVFSPVVCQKL*PFLGHL Trigger: AAGGTGTCCTAGAAATGGCCAGAGTTTTTGACAGAC...CACCGGGCTGAACACGTGACGTGCAGCATCTCTGAGGACGAGGTGTTTATTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
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| CDS-3UTR GCA 90 bp | ATAAATAAACACCTCGTCCTCAGAGATGCTGCACGTCACGTGTTCAGCCCGGTGCTCATTTTTCACAGTTaGATCTGCCCCTTTATCAAG | + |
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Preference number: 4 (lower is better) Translates to: INKHLVLRDAARHVFSPVLIFHS*ICPFIK Trigger: CTTGATAAAGGGGCAGATGCAACTGTGAAAAATGAG...CACCGGGCTGAACACGTGACGTGCAGCATCTCTGAGGACGAGGTGTTTATTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
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| CDS-3UTR TCA 90 bp | TTCAATGTGGGAAGAGTTGCCCATTACATAAAAGTCACTGTGAATCTTCAACTACAGCGGAGACTCTCATaGGTGGCGTCCATCCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: FNVGRVAHYIKVTVNLQLQRRLS*VASILN Trigger: GTTCAGGATGGACGCCACTCATGAGAGTCTCCGCTG...TAGTTGAAGATTCACAGTGACTTTTATGTAATGGGCAACTCTTCCCACATTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
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| CDS-3UTR TCA 90 bp | CAATGTGGGAAGAGTTGCCCATTACATAAAAGTCACTGTGAATCTTCAACTAAACAGCGGAGACTCTCATaGGTGGCGTCCATCCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QCGKSCPLHKSHCESSTKQRRLS*VASILN Trigger: GTTCAGGATGGACGCCACTCATGAGAGTCTCCGCTG...TTTAGTTGAAGATTCACAGTGACTTTTATGTAATGGGCAACTCTTCCCACATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
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| CDS-3UTR GCA 90 bp | CAATGTGGGAAGAGTTGCCCATTACATAAAAGTCACTGTGAATCTTCAACTAAACCCACAACAGGAGGATaGGGCTTTGAGAGTGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: QCGKSCPLHKSHCESSTKPTTGG*GFESGT Trigger: CGTGCCACTCTCAAAGCCGCATCCTCCTGTTGTGGG...TTTAGTTGAAGATTCACAGTGACTTTTATGTAATGGGCAACTCTTCCCACATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
||
| CDS-3UTR GCA 90 bp | GTCCTTCAACTAAACACTGCAAACAGAACCACGCCAGCCTACACATATGTATTCCCCAGTACAATTCGATaGTGTGATGAGTCACCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLQLNTANRTTPAYTYVFPSTIR*CDESPC Trigger: GCAAGGTGACTCATCACAGCATCGAATTGTACTGGG...GAATACATATGTGTAGGCTGGCGTGGTTCTGTTTGCAGTGTTTAGTTGAAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
||
| CDS-3UTR CCA 90 bp | CAATGTGGGAAGAGTTGCCCATTACATAAAAGTCACTGTGAATCTTCAACTAAAAGTGAGGCCACCTTCTaGCTTCCTGTCACAGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QCGKSCPLHKSHCESSTKSEATF*LPVTAE Trigger: CTCCGCTGTGACAGGAAGCCAGAAGGTGGCCTCACT...TTTAGTTGAAGATTCACAGTGACTTTTATGTAATGGGCAACTCTTCCCACATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
||
| CDS-3UTR GCA 90 bp | CAATGTGGGAAGAGTTGCCCATTACATAAAAGTCACTGTGAATCTTCAACTAAATGCTCCTGTGGTCCTTaGCGTTTCTCTTTCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QCGKSCPLHKSHCESSTKCSCGP*RFSFCS Trigger: GGAACAGAAAGAGAAACGGCAAGGACCACAGGAGCA...TTTAGTTGAAGATTCACAGTGACTTTTATGTAATGGGCAACTCTTCCCACATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
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| CDS-3UTR TCA 90 bp | TTCAATGTGGGAAGAGTTGCCCATTACATAAAAGTCACTGTGAATCTTCAACTAACACTGACAGCACGATaGAAGTGTTCGCTACTTATG | + |
|
Preference number: 4 (lower is better) Translates to: FNVGRVAHYIKVTVNLQLTLTAR*KCSLLM Trigger: CATAAGTAGCGAACACTTTCATCGTGCTGTCAGTGT...TAGTTGAAGATTCACAGTGACTTTTATGTAATGGGCAACTCTTCCCACATTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
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| CDS-3UTR GCA 90 bp | TTCAATGTGGGAAGAGTTGCCCATTACATAAAAGTCACTGTGAATCTTCAACTAAACCACATGCCTTGTTaGATAACCCGTGTAAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: FNVGRVAHYIKVTVNLQLNHMPC*ITRVND Trigger: GTCATTTACACGGGTTATGCAACAAGGCATGTGGTT...TAGTTGAAGATTCACAGTGACTTTTATGTAATGGGCAACTCTTCCCACATTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
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| CDS-3UTR CCA 90 bp | TTCAATGTGGGAAGAGTTGCCCATTACATAAAAGTCACTGTGAATCTTCAACTAACGTCAATCATGACATaGCCTCCTTCCAAAATTCGA | + |
|
Preference number: 4 (lower is better) Translates to: FNVGRVAHYIKVTVNLQLTSIMT*PPSKIR Trigger: TCGAATTTTGGAAGGAGGCCATGTCATGATTGACGT...TAGTTGAAGATTCACAGTGACTTTTATGTAATGGGCAACTCTTCCCACATTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
||
| CDS-3UTR GCA 90 bp | TTCAATGTGGGAAGAGTTGCCCATTACATAAAAGTCACTGTGAATCTTCAACTATCAGATTCACATCTGTaGCATTGGAAACTAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: FNVGRVAHYIKVTVNLQLSDSHL*HWKLGS Trigger: AGATCCTAGTTTCCAATGGCACAGATGTGAATCTGA...TAGTTGAAGATTCACAGTGACTTTTATGTAATGGGCAACTCTTCCCACATTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
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| CDS-3UTR CCA 90 bp | CAATGTGGGAAGAGTTGCCCATTACATAAAAGTCACTGTGAATCTTCAACTAAATCACATCTGTGCCATTaGAAACTAGGATCTTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: QCGKSCPLHKSHCESSTKSHLCH*KLGSSQ Trigger: TTGTGAAGATCCTAGTTTCCAATGGCACAGATGTGA...TTTAGTTGAAGATTCACAGTGACTTTTATGTAATGGGCAACTCTTCCCACATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
||
| CDS-3UTR GCA 90 bp | CAATGTGGGAAGAGTTGCCCATTACATAAAAGTCACTGTGAATCTTCAACTAAATTTCTAGGACACCTTTaGCAAACTCATTTTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: QCGKSCPLHKSHCESSTKFLGHL*QTHFSQ Trigger: CTGTGAAAAATGAGTTTGGCAAAGGTGTCCTAGAAA...TTTAGTTGAAGATTCACAGTGACTTTTATGTAATGGGCAACTCTTCCCACATTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
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| CDS CCA 90 bp | GTGTTCGCTACTTATGGGCTCCCGGGTCGTAGCCACCGAGACGACTaGGCTGTACTCATATTCTCCAGAGGGGCTGGTGACCTTCAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: VFATYGLPGRSHRDD*AVLIFSRGAGDLQS Trigger: CGACTGAAGGTCACCAGCCCCTCTGGAGAATATGAGTACAGCCCAGTCGTCTCGGTGGCTACGACCCGGGAGCCCATAAGTAGCGAACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065359.12 ENSMUST00000151031.2 ENSMUST00000209511.2 ENSMUST00000211077.2 |
||
| CDS CCA 90 bp | ATGTTCACGTCAGCCCCAGCCTCGATGAGGAGTGAGGCCACCTTCTaGCTTCCTGTCACAGCGGAGACTCTCATGAGTGGCGTCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: MFTSAPASMRSEATF*LPVTAETLMSGVHP Trigger: AGGATGGACGCCACTCATGAGAGTCTCCGCTGTGACAGGAAGCCAGAAGGTGGCCTCACTCCTCATCGAGGCTGGGGCTGACGTGAACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
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| CDS TCA 90 bp | GGAGTGAGGCCACCTTCTGGCTTCCTGTCACAGCGGAGACTCTCATaGGTGGCGTCCATCCTGAACCAGTGTCTACAACATCTACCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GVRPPSGFLSQRRLS*VASILNQCLQHLPH Trigger: GTGAGGTAGATGTTGTAGACACTGGTTCAGGATGGACGCCACTCATGAGAGTCTCCGCTGTGACAGGAAGCCAGAAGGTGGCCTCACTCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
||
| CDS GCA 90 bp | CTGTGCATCTTGGGGTCCTCCTCCTCAATGGAGAACCGAAGCCACTaGTCCTGTGGTCCTTGCCGTTTCTCTTTCTGTTCCAGATCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LCILGSSSSMENRSH*SCGPCRFSFCSRSQ Trigger: CTGGGATCTGGAACAGAAAGAGAAACGGCAAGGACCACAGGAGCAGTGGCTTCGGTTCTCCATTGAGGAGGAGGACCCCAAGATGCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065359.12 ENSMUST00000121560.2 ENSMUST00000209511.2 |
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| CDS TCA 90 bp | GCCCGGTGGTCACAGTTTGCTGTTCTCTCAAGTCGGTCTCTCAGATaGGTAGCACTCTGCTCAGTGGACAGAGGACTTCCTTGGCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: ARWSQFAVLSSRSLR*VALCSVDRGLPWHL Trigger: AAGATGCCAAGGAAGTCCTCTGTCCACTGAGCAGAGTGCTACTCATCTGAGAGACCGACTTGAGAGAACAGCAAACTGTGACCACCGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121560.2 |
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| CDS TCA 90 bp | GGCCTCCTTCCAAAATTCGAAGCAGGAGATCTTCATCGTTCACACTaGCAGCACGATGAAAGTGTTCGCTACTTATGGGCTCCCGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: GLLPKFEAGDLHRSH*QHDESVRYLWAPGS Trigger: CGACCCGGGAGCCCATAAGTAGCGAACACTTTCATCGTGCTGTCAGTGTGAACGATGAAGATCTCCTGCTTCGAATTTTGGAAGGAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065359.12 ENSMUST00000151031.2 ENSMUST00000209511.2 ENSMUST00000211077.2 |
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| CDS GCA 90 bp | TCCTCCTCCTCAATGGAGAACCGAAGCCACTGCTCCTGTGGTCCTTaGCGTTTCTCTTTCTGTTCCAGATCCCAGTACAATTCGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSSMENRSHCSCGP*RFSFCSRSQYNSML Trigger: CAGCATCGAATTGTACTGGGATCTGGAACAGAAAGAGAAACGGCAAGGACCACAGGAGCAGTGGCTTCGGTTCTCCATTGAGGAGGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065359.12 ENSMUST00000121560.2 ENSMUST00000209511.2 |
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| CDS GCA 90 bp | TCTGTTCCAGATCCCAGTACAATTCGATGCTGTGATGAGTCACCTTaGCCACAACAGGAGGATGCGGCTTTGAGAGTGGCACGACTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVPDPSTIRCCDESP*PQQEDAALRVARLQ Trigger: CTGAAGTCGTGCCACTCTCAAAGCCGCATCCTCCTGTTGTGGGCAAGGTGACTCATCACAGCATCGAATTGTACTGGGATCTGGAACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209511.2 |
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| CDS-3UTR CAA 90 bp | GAGGTGAGCATGGGCAGACACATGAACCGATGGACCTGCCCTCGCAGCCCTGTCATTTCTAGGACACCTTaGCCAAACTCATTTTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: EVSMGRHMNRWTCPRSPVISRTP*PNSFFT Trigger: TGTGAAAAATGAGTTTGGCAAAGGTGTCCTAGAAAT...GACAGGGCTGCGAGGGCAGGTCCATCGGTTCATGTGTCTGCCCATGCTCACCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| CDS TCA 90 bp | CCACCGAGACGACTGGGCTGTACTCATATTCTCCAGAGGGGCTGGTaGCCTTCAGTCGAAATTTGTATAGTGTCCTTGGTTCTAGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PPRRLGCTHILQRGW*PSVEICIVSLVLGL Trigger: AAGGCCTAGAACCAAGGACACTATACAAATTTCGACTGAAGGTCACCAGCCCCTCTGGAGAATATGAGTACAGCCCAGTCGTCTCGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065359.12 ENSMUST00000151031.2 ENSMUST00000209511.2 ENSMUST00000211077.2 |
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| CDS TCA 90 bp | AAAATTCGAAGCAGGAGATCTTCATCGTTCACACTGACAGCACGATaGAAGTGTTCGCTACTTATGGGCTCCCGGGTCGTAGCCACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: KIRSRRSSSFTLTAR*KCSLLMGSRVVATE Trigger: CTCGGTGGCTACGACCCGGGAGCCCATAAGTAGCGAACACTTTCATCGTGCTGTCAGTGTGAACGATGAAGATCTCCTGCTTCGAATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065359.12 ENSMUST00000151031.2 ENSMUST00000209511.2 ENSMUST00000211077.2 |
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| CDS TCA 90 bp | CTGGCTTCCTGTCACAGCGGAGACTCTCATGAGTGGCGTCCATCCTaGACCAGTGTCTACAACATCTACCTCACAACCGTCCTTTATCAT | + |
|
Preference number: 5 (lower is better) Translates to: LASCHSGDSHEWRPS*TSVYNIYLTTVLYH Trigger: ATGATAAAGGACGGTTGTGAGGTAGATGTTGTAGACACTGGTTCAGGATGGACGCCACTCATGAGAGTCTCCGCTGTGACAGGAAGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
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| CDS GCA 90 bp | TCTGTTCCAGATCCCAGTACAATTCGATGCTGTGATGAGTCACCTTaGCCACAACAGGAGGATGCGGCTTTGAGAGTGGCACGACTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SVPDPSTIRCCDESP*PQQEDAALRVARLC Trigger: ACAAAGTCGTGCCACTCTCAAAGCCGCATCCTCCTGTTGTGGGCAAGGTGACTCATCACAGCATCGAATTGTACTGGGATCTGGAACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000121560.2 |
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| CDS-3UTR CAA 90 bp | AGCCCTGTCCTTCAACTAAACACTGCAAACAGAACCACGCCAGCCTACACATATTGTCTCCGGAGGTATTaGACAACATCTAGGTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SPVLQLNTANRTTPAYTYCLRRY*TTSRCP Trigger: GGGGCACCTAGATGTTGTCAAATACCTCCGGAGACA...ATATGTGTAGGCTGGCGTGGTTCTGTTTGCAGTGTTTAGTTGAAGGACAGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| CDS-3UTR CAA 90 bp | ATAAATAAACACCTCGTCCTCAGAGATGCTGCACGTCACGTGTTCAGCCCGGTGTTTCCATCTTTGTCCTaGATGTTCACGTCAGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: INKHLVLRDAARHVFSPVFPSLS*MFTSAP Trigger: TGGGGCTGACGTGAACATCAAGGACAAAGATGGAAA...CACCGGGCTGAACACGTGACGTGCAGCATCTCTGAGGACGAGGTGTTTATTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
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| CDS CCA 90 bp | GACTGTCCTTGCCACTTCCGTTCTTCAGATTCACATCTGTGCCATTaGAAACTAGGATCTTCACAAGCCTGGTGTAACCTTTCTGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DCPCHFRSSDSHLCH*KLGSSQAWCNLSEQ Trigger: CTGCTCAGAAAGGTTACACCAGGCTTGTGAAGATCCTAGTTTCCAATGGCACAGATGTGAATCTGAAGAACGGAAGTGGCAAGGACAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065359.12 ENSMUST00000151031.2 ENSMUST00000209511.2 |
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| CDS-3UTR CAA 90 bp | ATAAATAAACACCTCGTCCTCAGAGATGCTGCACGTCACGTGTTCAGCCCGGTGTTCACATCTGTGCCATaGGAAACTAGGATCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: INKHLVLRDAARHVFSPVFTSVP*ETRIFT Trigger: TGTGAAGATCCTAGTTTCCAATGGCACAGATGTGAA...CACCGGGCTGAACACGTGACGTGCAGCATCTCTGAGGACGAGGTGTTTATTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
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| CDS-3UTR CAA 90 bp | AGCCCTGTCCTTCAACTAAACACTGCAAACAGAACCACGCCAGCCTACACATATTTTCCATCTTTGTCCTaGATGTTCACGTCAGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPVLQLNTANRTTPAYTYFPSLS*MFTSAP Trigger: TGGGGCTGACGTGAACATCAAGGACAAAGATGGAAA...ATATGTGTAGGCTGGCGTGGTTCTGTTTGCAGTGTTTAGTTGAAGGACAGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| CDS CCA 90 bp | ATGAGAGCGGTAAAGCCAAATTTGTTGGGCACGTCAATCATGACATaGCCTCCTTCCAAAATTCGAAGCAGGAGATCTTCATCGTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: MRAVKPNLLGTSIMT*PPSKIRSRRSSSFT Trigger: TGTGAACGATGAAGATCTCCTGCTTCGAATTTTGGAAGGAGGCCATGTCATGATTGACGTGCCCAACAAATTTGGCTTTACCGCTCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065359.12 ENSMUST00000151031.2 ENSMUST00000209511.2 ENSMUST00000211077.2 |
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| CDS-3UTR CAA 90 bp | ATAAATAAACACCTCGTCCTCAGAGATGCTGCACGTCACGTGTTCAGCCCGGTGATTTCTAGGACACCTTaGCCAAACTCATTTTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: INKHLVLRDAARHVFSPVISRTP*PNSFFT Trigger: TGTGAAAAATGAGTTTGGCAAAGGTGTCCTAGAAAT...CACCGGGCTGAACACGTGACGTGCAGCATCTCTGAGGACGAGGTGTTTATTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
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| CDS-3UTR CAA 90 bp | AGCCCTGTCCTTCAACTAAACACTGCAAACAGAACCACGCCAGCCTACACATATACTCATTTTTCACAGTaGCATCTGCCCCTTTATCAA | + |
|
Preference number: 5 (lower is better) Translates to: SPVLQLNTANRTTPAYTYTHFSQ*HLPLYQ Trigger: TTGATAAAGGGGCAGATGCAACTGTGAAAAATGAGT...ATATGTGTAGGCTGGCGTGGTTCTGTTTGCAGTGTTTAGTTGAAGGACAGGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| CDS-3UTR CAA 90 bp | GTCCTTCAACTAAACACTGCAAACAGAACCACGCCAGCCTACACATATGTATTCACCTTCAGTCGAAATTaGTATAGTGTCCTTGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VLQLNTANRTTPAYTYVFTFSRN*YSVLGS Trigger: AGAACCAAGGACACTATACAAATTTCGACTGAAGGT...GAATACATATGTGTAGGCTGGCGTGGTTCTGTTTGCAGTGTTTAGTTGAAGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065359.12 |
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| CDS-3UTR CAA 90 bp | TTCAATGTGGGAAGAGTTGCCCATTACATAAAAGTCACTGTGAATCTTCAACTAGGCGTCTTTCCATCTTaGTCCTTGATGTTCACGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FNVGRVAHYIKVTVNLQLGVFPS*SLMFTS Trigger: TGACGTGAACATCAAGGACAAAGATGGAAAGACGCC...TAGTTGAAGATTCACAGTGACTTTTATGTAATGGGCAACTCTTCCCACATTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
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| CDS-3UTR CAA 90 bp | CAATGTGGGAAGAGTTGCCCATTACATAAAAGTCACTGTGAATCTTCAACTAAAGGCGTCTTTCCATCTTaGTCCTTGATGTTCACGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QCGKSCPLHKSHCESSTKGVFPS*SLMFTS Trigger: TGACGTGAACATCAAGGACAAAGATGGAAAGACGCC...TTTAGTTGAAGATTCACAGTGACTTTTATGTAATGGGCAACTCTTCCCACATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
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| CDS-3UTR CAA 90 bp | TTCAATGTGGGAAGAGTTGCCCATTACATAAAAGTCACTGTGAATCTTCAACTATTCACATCTGTGCCATaGGAAACTAGGATCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: FNVGRVAHYIKVTVNLQLFTSVP*ETRIFT Trigger: TGTGAAGATCCTAGTTTCCAATGGCACAGATGTGAA...TAGTTGAAGATTCACAGTGACTTTTATGTAATGGGCAACTCTTCCCACATTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
||
| CDS-3UTR CAA 90 bp | CAATGTGGGAAGAGTTGCCCATTACATAAAAGTCACTGTGAATCTTCAACTAAAACCTTCAGTCGAAATTaGTATAGTGTCCTTGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QCGKSCPLHKSHCESSTKTFSRN*YSVLGS Trigger: AGAACCAAGGACACTATACAAATTTCGACTGAAGGT...TTTAGTTGAAGATTCACAGTGACTTTTATGTAATGGGCAACTCTTCCCACATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
||
| CDS-3UTR CAA 90 bp | TTCAATGTGGGAAGAGTTGCCCATTACATAAAAGTCACTGTGAATCTTCAACTAACTCATTTTTCACAGTaGCATCTGCCCCTTTATCAA | + |
|
Preference number: 5 (lower is better) Translates to: FNVGRVAHYIKVTVNLQLTHFSQ*HLPLYQ Trigger: TTGATAAAGGGGCAGATGCAACTGTGAAAAATGAGT...TAGTTGAAGATTCACAGTGACTTTTATGTAATGGGCAACTCTTCCCACATTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
||
| CDS CCA 72 bp | TCAGCCCCAGCCTCGATGAGGAGTGAGGCCACCTTCTaGCTTCCTGTCACAGCGGAGACTCTCATGAGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SAPASMRSEATF*LPVTAETLMSG Trigger: GCCACTCATGAGAGTCTCCGCTGTGACAGGAAGCCAGAAGGTGGCCTCACTCCTCATCGAGGCTGGGGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
||
| CDS TCA 72 bp | CTTGATGTTCACGTCAGCCCCAGCCTCGATGAGGAGTaGGGCCACCTTCTGGCTTCCTGTCACAGCGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LDVHVSPSLDEE*GHLLASCHSGD Trigger: GTCTCCGCTGTGACAGGAAGCCAGAAGGTGGCCTCACTCCTCATCGAGGCTGGGGCTGACGTGAACATCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
||
| CDS CCA 72 bp | ACTTATGGGCTCCCGGGTCGTAGCCACCGAGACGACTaGGCTGTACTCATATTCTCCAGAGGGGCTGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: TYGLPGRSHRDD*AVLIFSRGAGD Trigger: GTCACCAGCCCCTCTGGAGAATATGAGTACAGCCCAGTCGTCTCGGTGGCTACGACCCGGGAGCCCATAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065359.12 ENSMUST00000151031.2 ENSMUST00000209511.2 ENSMUST00000211077.2 |
||
| CDS TCA 72 bp | GAGCCTCCCAAGAAGCTCCGTGTCTCCGGAGGTATTTaGCAACATCTAGGTGCCCCGCGTAGCATGCAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: EPPKKLRVSGGI*QHLGAPRSMQA Trigger: TGCTTGCATGCTACGCGGGGCACCTAGATGTTGTCAAATACCTCCGGAGACACGGAGCTTCTTGGGAGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065359.12 ENSMUST00000151031.2 ENSMUST00000209511.2 |
||
| CDS TCA 72 bp | CCACCTTCTGGCTTCCTGTCACAGCGGAGACTCTCATaGGTGGCGTCCATCCTGAACCAGTGTCTACAACAT | + |
|
Preference number: 6 (lower is better) Translates to: PPSGFLSQRRLS*VASILNQCLQH Trigger: ATGTTGTAGACACTGGTTCAGGATGGACGCCACTCATGAGAGTCTCCGCTGTGACAGGAAGCCAGAAGGTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
||
| CDS CCA 72 bp | CTCCTCCTCAATGGAGAACCGAAGCCACTGCTCCTGTaGTCCTTGCCGTTTCTCTTTCTGTTCCAGATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LLLNGEPKPLLL*SLPFLFLFQIP Trigger: TGGGATCTGGAACAGAAAGAGAAACGGCAAGGACCACAGGAGCAGTGGCTTCGGTTCTCCATTGAGGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065359.12 ENSMUST00000121560.2 ENSMUST00000209511.2 |
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| CDS TCA 72 bp | TGTCACAGCGGAGACTCTCATGAGTGGCGTCCATCCTaGACCAGTGTCTACAACATCTACCTCACAACCGTC | + |
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Preference number: 6 (lower is better) Translates to: CHSGDSHEWRPS*TSVYNIYLTTV Trigger: GACGGTTGTGAGGTAGATGTTGTAGACACTGGTTCAGGATGGACGCCACTCATGAGAGTCTCCGCTGTGACA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
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| CDS CAA 90 bp | GTCCTCCTCCTCAATGGAGAACCGAAGCCACTGCTCCTGTGGTCCTaGCCGTTTCTCTTTCTGTTCCAGATCCCAGTACAATTCGATGCT | + |
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Preference number: 6 (lower is better) Translates to: VLLLNGEPKPLLLWS*PFLFLFQIPVQFDA Trigger: AGCATCGAATTGTACTGGGATCTGGAACAGAAAGAGAAACGGCAAGGACCACAGGAGCAGTGGCTTCGGTTCTCCATTGAGGAGGAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065359.12 ENSMUST00000121560.2 ENSMUST00000209511.2 |
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| CDS TCA 72 bp | AGCAGGAGATCTTCATCGTTCACACTGACAGCACGATaGAAGTGTTCGCTACTTATGGGCTCCCGGGTCGTA | + |
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Preference number: 6 (lower is better) Translates to: SRRSSSFTLTAR*KCSLLMGSRVV Trigger: TACGACCCGGGAGCCCATAAGTAGCGAACACTTTCATCGTGCTGTCAGTGTGAACGATGAAGATCTCCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065359.12 ENSMUST00000151031.2 ENSMUST00000209511.2 ENSMUST00000211077.2 |
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| CDS TCA 72 bp | TCACAGTTTGCTGTTCTCTCAAGTCGGTCTCTCAGATaGGTAGCACTCTGCTCAGTGGACAGAGGACTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SQFAVLSSRSLR*VALCSVDRGLP Trigger: AGGAAGTCCTCTGTCCACTGAGCAGAGTGCTACTCATCTGAGAGACCGACTTGAGAGAACAGCAAACTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121560.2 |
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| CDS GCA 72 bp | TCAATGGAGAACCGAAGCCACTGCTCCTGTGGTCCTTaGCGTTTCTCTTTCTGTTCCAGATCCCAGTACAAT | + |
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Preference number: 6 (lower is better) Translates to: SMENRSHCSCGP*RFSFCSRSQYN Trigger: ATTGTACTGGGATCTGGAACAGAAAGAGAAACGGCAAGGACCACAGGAGCAGTGGCTTCGGTTCTCCATTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065359.12 ENSMUST00000121560.2 ENSMUST00000209511.2 |
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| CDS TCA 72 bp | CGACTGGGCTGTACTCATATTCTCCAGAGGGGCTGGTaGCCTTCAGTCGAAATTTGTATAGTGTCCTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: RLGCTHILQRGW*PSVEICIVSLV Trigger: AACCAAGGACACTATACAAATTTCGACTGAAGGTCACCAGCCCCTCTGGAGAATATGAGTACAGCCCAGTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065359.12 ENSMUST00000151031.2 ENSMUST00000209511.2 ENSMUST00000211077.2 |
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| CDS CAA 90 bp | CTGTACTCATATTCTCCAGAGGGGCTGGTGACCTTCAGTCGAAATTaGTATAGTGTCCTTGGTTCTAGGCCTTCAACCACATGCCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: LYSYSPEGLVTFSRN*YSVLGSRPSTTCLV Trigger: AACAAGGCATGTGGTTGAAGGCCTAGAACCAAGGACACTATACAAATTTCGACTGAAGGTCACCAGCCCCTCTGGAGAATATGAGTACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065359.12 ENSMUST00000151031.2 ENSMUST00000209511.2 ENSMUST00000211077.2 |
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| CDS CAA 72 bp | TATTCTCCAGAGGGGCTGGTGACCTTCAGTCGAAATTaGTATAGTGTCCTTGGTTCTAGGCCTTCAACCACA | + |
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Preference number: 6 (lower is better) Translates to: YSPEGLVTFSRN*YSVLGSRPSTT Trigger: TGTGGTTGAAGGCCTAGAACCAAGGACACTATACAAATTTCGACTGAAGGTCACCAGCCCCTCTGGAGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065359.12 ENSMUST00000151031.2 ENSMUST00000209511.2 ENSMUST00000211077.2 |
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| CDS TCA 72 bp | CCAAAATTCGAAGCAGGAGATCTTCATCGTTCACACTaGCAGCACGATGAAAGTGTTCGCTACTTATGGGCT | + |
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Preference number: 6 (lower is better) Translates to: PKFEAGDLHRSH*QHDESVRYLWA Trigger: AGCCCATAAGTAGCGAACACTTTCATCGTGCTGTCAGTGTGAACGATGAAGATCTCCTGCTTCGAATTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065359.12 ENSMUST00000151031.2 ENSMUST00000209511.2 ENSMUST00000211077.2 |
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| CDS CCA 72 bp | TGCCACTTCCGTTCTTCAGATTCACATCTGTGCCATTaGAAACTAGGATCTTCACAAGCCTGGTGTAACCTT | + |
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Preference number: 6 (lower is better) Translates to: CHFRSSDSHLCH*KLGSSQAWCNL Trigger: AAGGTTACACCAGGCTTGTGAAGATCCTAGTTTCCAATGGCACAGATGTGAATCTGAAGAACGGAAGTGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065359.12 ENSMUST00000151031.2 ENSMUST00000209511.2 |
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| CDS TCA 72 bp | TTCTTTTCTTCCAGTAAGGAAAGTACATTGTGTAAATaGCACCGTAGCTGTGCATCTTGGGGTCCTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: FFSSSKESTLCK*HRSCASWGPPP Trigger: AGGAGGAGGACCCCAAGATGCACAGCTACGGTGTCATTTACACAATGTACTTTCCTTACTGGAAGAAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121560.2 |
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| CDS CCA 72 bp | CCAGTAAGGAAAGTACATTCTGTCTGTCAAAAACTCTaGCCATTTCTAGGACACCTTTGCCAAACTCATTTT | + |
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Preference number: 6 (lower is better) Translates to: PVRKVHSVCQKL*PFLGHLCQTHF Trigger: AAAATGAGTTTGGCAAAGGTGTCCTAGAAATGGCCAGAGTTTTTGACAGACAGAATGTACTTTCCTTACTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065359.12 ENSMUST00000209511.2 |
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