RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FANCM (Mus musculus)

Ensembl gene IDs: ENSMUSG00000055884

Ensembl transcript IDs: ENSMUST00000058889.5, ENSMUST00000221175.2, ENSMUST00000221937.2, ENSMUST00000222540.2

Found 351 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTGAAGCCCAGAGCTGGCCCTGCTGTGTGTGCTCAGCAGCAGCGTaGCCACCAGCAACGGAGTGTTCTCTGTCCTTCGGGATGTTTTCT +
Preference number: 1 (lower is better)
Translates to: PEAQSWPCCVCSAAA*PPATECSLSFGMFS
Trigger: AGAAAACATCCCGAAGGACAGAGAACACTCCGTTGCTGGTGGCCACGCTGCTGCTGAGCACACACAGCAGGGCCAGCTCTGGGCTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR TCA 90 bp GCGAGGACAGGAACTCAAGCAGGGCTTGCACTTAGAGGCAGGAGCTaGTGCAGAGGCCATGGAGGGAGGGATGCTGCTTATTGGCCTGCT +
Preference number: 1 (lower is better)
Translates to: ARTGTQAGLALRGRS*CRGHGGRDAAYWPA
Trigger: AGCAGGCCAATAAGCAGCATCCCTCCCTCCATGGCCTCTGCATCAGCTCCTGCCTCTAAGTGCAAGCCCTGCTTGAGTTCCTGTCCTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR TCA 90 bp CAGAGGCCATGGAGGGAGGGATGCTGCTTATTGGCCTGCTTCCCATaGCTTGCTCACCTTGCTTTCTTAGACCCCAGGAGCAGCAGCCCA +
Preference number: 1 (lower is better)
Translates to: QRPWREGCCLLACFP*LAHLAFLDPRSSSP
Trigger: TGGGCTGCTGCTCCTGGGGTCTAAGAAAGCAAGGTGAGCAAGTCATGGGAAGCAGGCCAATAAGCAGCATCCCTCCCTCCATGGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR TCA 90 bp CAGGGAGGAATCCTGCTCGTTCTCAGACTCATCCTCCTCATCTGCTaGGACACAGTCCACATCCTCTCCAGAAACCTCTGCCTCGTCGTC +
Preference number: 1 (lower is better)
Translates to: QGGILLVLRLILLIC*DTVHILSRNLCLVV
Trigger: GACGACGAGGCAGAGGTTTCTGGAGAGGATGTGGACTGTGTCTCAGCAGATGAGGAGGATGAGTCTGAGAACGAGCAGGATTCCTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR CCA 90 bp CAGTGCGCCGAGGGGACTGATGCACAAAGACCTGATCGCTGCTCTTaGTCTCTTCTACAGAAAATCCTAGATGGCCCAGTCTTGGGTTCA +
Preference number: 1 (lower is better)
Translates to: QCAEGTDAQRPDRCS*SLLQKILDGPVLGS
Trigger: TGAACCCAAGACTGGGCCATCTAGGATTTTCTGTAGAAGAGACCAAGAGCAGCGATCAGGTCTTTGTGCATCAGTCCCCTCGGCGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR GCA 90 bp TCTCCTTATCAGAATGCCTTCCAGACACATCGGCCGCTCCCAGGGTaGGAGTCCTATCAGATGCACCTGCTAGCATTTCATCATCTGAAC +
Preference number: 1 (lower is better)
Translates to: SPYQNAFQTHRPLPG*ESYQMHLLAFHHLN
Trigger: GTTCAGATGATGAAATGCTAGCAGGTGCATCTGATAGGACTCGCACCCTGGGAGCGGCCGATGTGTCTGGAAGGCATTCTGATAAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR GCA 90 bp CAACTTCAGTGCGCCGAGGGGACTGATGCACAAAGACCTGATCGCTaGTCTTGGTCTCTTCTACAGAAAATCCTAGATGGCCCAGTCTTG +
Preference number: 1 (lower is better)
Translates to: QLQCAEGTDAQRPDR*SWSLLQKILDGPVL
Trigger: CAAGACTGGGCCATCTAGGATTTTCTGTAGAAGAGACCAAGAGCAGCGATCAGGTCTTTGTGCATCAGTCCCCTCGGCGCACTGAAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR TCA 90 bp CAACAACTACTTACAGCAGTTTCCCTCCTTCCAGATAGCTTAAGTTaGCTTAAGAGCAGCCAGCACAGGGATGACCTGAGGTTGTCAGGC +
Preference number: 1 (lower is better)
Translates to: QQLLTAVSLLPDSLS*LKSSQHRDDLRLSG
Trigger: GCCTGACAACCTCAGGTCATCCCTGTGCTGGCTGCTCTTAAGTCAACTTAAGCTATCTGGAAGGAGGGAAACTGCTGTAAGTAGTTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR TCA 90 bp CGCTGGAGAAACAGGTCTAGGACTGTGTTCATGCTCTGGGTAGGGTaGACAGGATGCATTATCAAATTCACAACCCTGAGTAACATCATA +
Preference number: 1 (lower is better)
Translates to: RWRNRSRTVFMLWVG*TGCIIKFTTLSNII
Trigger: TATGATGTTACTCAGGGTTGTGAATTTGATAATGCATCCTGTTCACCCTACCCAGAGCATGAACACAGTCCTAGACCTGTTTCTCCAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR GCA 90 bp GTAATCTTGGTCCATTTAGAATCCCTTTGTTTAACAGTGTCAGCATaGTCTTCCTCAGACTCTATCACCGTCAAGGAGCCTCCTGCATCT +
Preference number: 1 (lower is better)
Translates to: VILVHLESLCLTVSA*SSSDSITVKEPPAS
Trigger: AGATGCAGGAGGCTCCTTGACGGTGATAGAGTCTGAGGAAGAGCATGCTGACACTGTTAAACAAAGGGATTCTAAATGGACCAAGATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR TCA 90 bp CACATATCCTTTGAAACATGCTCTGCAGGCGCTGCATCTGCTCGATaGACTTGTTCTTGCTGGTATTACTTAACATTTCAGACTGAGACC +
Preference number: 1 (lower is better)
Translates to: HISFETCSAGAASAR*TCSCWYYLTFQTET
Trigger: GGTCTCAGTCTGAAATGTTAAGTAATACCAGCAAGAACAAGTTCATCGAGCAGATGCAGCGCCTGCAGAGCATGTTTCAAAGGATATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR TCA 90 bp TCTCCTGCTTTTTCTCTGTCTTTTTCCACAATCACACATATCCTTTaGAACATGCTCTGCAGGCGCTGCATCTGCTCGATGAACTTGTTC +
Preference number: 1 (lower is better)
Translates to: SPAFSLSFSTITHIL*NMLCRRCICSMNLF
Trigger: GAACAAGTTCATCGAGCAGATGCAGCGCCTGCAGAGCATGTTTCAAAGGATATGTGTGATTGTGGAAAAAGACAGAGAAAAAGCAGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR GCA 90 bp AGGTTGTCAGGCTTGGGCAGCTTCCAGCCCTTTGCCTTACTTAGATaGTTAAATCACTCTGACCAAACCCTTCAAATAGCCTTGATTTAT +
Preference number: 1 (lower is better)
Translates to: RLSGLGSFQPFALLR*LNHSDQTLQIALIY
Trigger: ATAAATCAAGGCTATTTGAAGGGTTTGGTCAGAGTGATTTAAGCATCTAAGTAAGGCAAAGGGCTGGAAGCTGCCCAAGCCTGACAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR CCA 90 bp GTTGGGACGCTTCTCACGGACCATTCTGTACTTAGTGCTCATCAATaGACTGCGTACAGACTTCATGTAAATAGCTCTCATTTCAGAATC +
Preference number: 1 (lower is better)
Translates to: VGTLLTDHSVLSAHQ*TAYRLHVNSSHFRI
Trigger: GATTCTGAAATGAGAGCTATTTACATGAAGTCTGTACGCAGTCCATTGATGAGCACTAAGTACAGAATGGTCCGTGAGAAGCGTCCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR TCA 90 bp TTCATAATGCTTATAAAATGGTGGCAACGATCTGAATGGTCAACTTaGTGTGTAGGAAGCGGACGATCTTGCCAGAGACTCCATTCAGAG +
Preference number: 1 (lower is better)
Translates to: FIMLIKWWQRSEWST*CVGSGRSCQRLHSE
Trigger: CTCTGAATGGAGTCTCTGGCAAGATCGTCCGCTTCCTACACATCAAGTTGACCATTCAGATCGTTGCCACCATTTTATAAGCATTATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR CCA 90 bp TCTGAAGTTTCTGTCAGATGTAGGATGAAGTATGTCTGCTGGGACTaGAGAAAGTATGAAGACGGGGAAAGTCTCCTATTTATTGCACAT +
Preference number: 1 (lower is better)
Translates to: SEVSVRCRMKYVCWD*RKYEDGESLLFIAH
Trigger: ATGTGCAATAAATAGGAGACTTTCCCCGTCTTCATACTTTCTCCAGTCCCAGCAGACATACTTCATCCTACATCTGACAGAAACTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR TCA 90 bp CTACTGGCGACACTGGCTACATTATTATATCCATTCCTAGGAGCGTaGTATTTTGAGCAGACATCTTCCATTTGTAGAAAAGGTCTAATT +
Preference number: 1 (lower is better)
Translates to: LLATLATLLYPFLGA*YFEQTSSICRKGLI
Trigger: AATTAGACCTTTTCTACAAATGGAAGATGTCTGCTCAAAATATCACGCTCCTAGGAATGGATATAATAATGTAGCCAGTGTCGCCAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR TCA 90 bp GGTTCAGAATCATCATCTAACAACAGTTCATCAGAAATTAAGAAGTaGGAGACTGGAGGCATTTCACTTGTGAGAGTTTTACCTGACACA +
Preference number: 1 (lower is better)
Translates to: GSESSSNNSSSEIKK*ETGGISLVRVLPDT
Trigger: TGTGTCAGGTAAAACTCTCACAAGTGAAATGCCTCCAGTCTCTCACTTCTTAATTTCTGATGAACTGTTGTTAGATGATGATTCTGAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR CAA 90 bp TTCTCCTTGGTAGAGTCTAGTGTCTTGAGCATGTGTGCTCCTGTCTaGGAGCTCGCGTGTGACTTAGACAGCGGTGTGCTCCTGACTCTC +
Preference number: 2 (lower is better)
Translates to: FSLVESSVLSMCAPV*ELACDLDSGVLLTL
Trigger: GAGAGTCAGGAGCACACCGCTGTCTAAGTCACACGCGAGCTCCAAGACAGGAGCACACATGCTCAAGACACTAGACTCTACCAAGGAGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR TCA 90 bp GTAGAGTCTAGTGTCTTGAGCATGTGTGCTCCTGTCTTGGAGCTCGCGTGTGACTTGGCCTGCTTCCCATaGCTTGCTCACCTTGCTTTC +
Preference number: 2 (lower is better)
Translates to: VESSVLSMCAPVLELACDLACFP*LAHLAF
Trigger: GAAAGCAAGGTGAGCAAGTCATGGGAAGCAGGCCAA...GTCACACGCGAGCTCCAAGACAGGAGCACACATGCTCAAGACACTAGACTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR TCA 90 bp GTAGAGTCTAGTGTCTTGAGCATGTGTGCTCCTGTCTTGGAGCTCGCGTGTGACCTCAGTTGGGATTGGTaGTATGGCTCTACCCAGTGG +
Preference number: 2 (lower is better)
Translates to: VESSVLSMCAPVLELACDLSWDW*YGSTQW
Trigger: CCACTGGGTAGAGCCATATCACCAATCCCAACTGAG...GTCACACGCGAGCTCCAAGACAGGAGCACACATGCTCAAGACACTAGACTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR GCA 90 bp GTAGAGTCTAGTGTCTTGAGCATGTGTGCTCCTGTCTTGGAGCTCGCGTGTGACGATCCCACCTACATCTaGCATCCTTTCACCACTGGG +
Preference number: 2 (lower is better)
Translates to: VESSVLSMCAPVLELACDDPTYI*HPFTTG
Trigger: CCCAGTGGTGAAAGGATGGCAGATGTAGGTGGGATC...GTCACACGCGAGCTCCAAGACAGGAGCACACATGCTCAAGACACTAGACTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR TCA 90 bp AGATGTAGGATGAAGTATGTCTGCTGGGACTGGAGAAAGTATGAAGACGGGGAAAGTCTGAGAGTCCACTaGGAGACGGGGGAGAACGGG +
Preference number: 2 (lower is better)
Translates to: RCRMKYVCWDWRKYEDGESLRVH*ETGENG
Trigger: CCCGTTCTCCCCCGTCTCTCAGTGGACTCTCAGACT...TTCCCCGTCTTCATACTTTCTCCAGTCCCAGCAGACATACTTCATCCTACATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR TCA 90 bp ATTGCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACAGCCAGCACAGGGATaGCCTGAGGTTGTCAGGCTT +
Preference number: 2 (lower is better)
Translates to: IAAMQHHNQKSSCGGKGLQPAQG*PEVVRL
Trigger: AAGCCTGACAACCTCAGGTCATCCCTGTGCTGGCTG...TAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR-3UTR TCA 90 bp GTAGAGTCTAGTGTCTTGAGCATGTGTGCTCCTGTCTTGGAGCTCGCGTGTGACCCAACTTTGCCATCCTaGTACAGCGTTTGCAAACTC +
Preference number: 2 (lower is better)
Translates to: VESSVLSMCAPVLELACDPTLPS*YSVCKL
Trigger: GAGTTTGCAAACGCTGTATCAGGATGGCAAAGTTGG...GTCACACGCGAGCTCCAAGACAGGAGCACACATGCTCAAGACACTAGACTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR GCA 90 bp GCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACTTCCATGGAGGGAGGGATaGTGCTTATTGGCCTGCTTC +
Preference number: 2 (lower is better)
Translates to: AAMQHHNQKSSCGGKGLLPWREG*CLLACF
Trigger: GAAGCAGGCCAATAAGCAGCATCCCTCCCTCCATGG...AAGTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR-3UTR GCA 90 bp AAGAAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGAGGAAGCGGACGATCTTaGCAGAGACTCCATTCAGAG +
Preference number: 2 (lower is better)
Translates to: KKAETLDPLKLPDGVAAGGSGRS*QRLHSE
Trigger: CTCTGAATGGAGTCTCTGGCAAGATCGTCCGCTTCC...TCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR CAA 90 bp CCGATGAACATGGAGCTCACCAACTTTGCCATCCTGATACAGCGTTaGCAAACTCCTGATAGCCTCCATTTTCTGAAGTCCCCAGCACTG +
Preference number: 2 (lower is better)
Translates to: PMNMELTNFAILIQR*QTPDSLHFLKSPAL
Trigger: CAGTGCTGGGGACTTCAGAAAATGGAGGCTATCAGGAGTTTGCAAACGCTGTATCAGGATGGCAAAGTTGGTGAGCTCCATGTTCATCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR-3UTR TCA 90 bp CTGAAGTCCCCAGCACTGTATTGTCTTAGGTTTCTATTGCTGCGATGCAACACCTTGGCCTGCTTCCCATaGCTTGCTCACCTTGCTTTC +
Preference number: 2 (lower is better)
Translates to: LKSPALYCLRFLLLRCNTLACFP*LAHLAF
Trigger: GAAAGCAAGGTGAGCAAGTCATGGGAAGCAGGCCAA...GGTGTTGCATCGCAGCAATAGAAACCTAAGACAATACAGTGCTGGGGACTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR-3UTR TCA 90 bp TTCTATGCTCTTTTGAGACAGGATCTTGTTAAGGCCAAGGCTAGCCTTATAGCACTTAGAGGCAGGAGCTaGTGCAGAGGCCATGGAGGG +
Preference number: 2 (lower is better)
Translates to: FYALLRQDLVKAKASLIALRGRS*CRGHGG
Trigger: CCCTCCATGGCCTCTGCATCAGCTCCTGCCTCTAAG...TGCTATAAGGCTAGCCTTGGCCTTAACAAGATCCTGTCTCAAAAGAGCATAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR-3UTR TCA 90 bp GACCATTCGGCTGCTTACGATGTAGTCACAGCCATTAAGAGGACAAATCTCTACTCCACTGAAGCTACCTaGTGGGGTTGCTGCTGGACA +
Preference number: 2 (lower is better)
Translates to: DHSAAYDVVTAIKRTNLYSTEAT*WGCCWT
Trigger: TGTCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGA...GTAGAGATTTGTCCTCTTAATGGCTGTGACTACATCGTAAGCAGCCGAATGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR TCA 90 bp AAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGACATGGTTCAATGCCATTTTaGAGCCCTGTCCACCTGCTT +
Preference number: 2 (lower is better)
Translates to: KAETLDPLKLPDGVAAGHGSMPF*SPVHLL
Trigger: AAGCAGGTGGACAGGGCTTCAAAATGGCATTGAACC...ATGTCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR GCA 90 bp AAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGACATTGCAGGCGCTGCATCTaGTCGATGAACTTGTTCTTG +
Preference number: 2 (lower is better)
Translates to: KAETLDPLKLPDGVAAGHCRRCI*SMNLFL
Trigger: CAAGAACAAGTTCATCGAGCAGATGCAGCGCCTGCA...ATGTCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR CAA 90 bp AGGAAGCGGACGATCTTGCCAGAGACTCCATTCAGAGAGAGAGAGTaGGTGAATTCTAGTAGTTGGGTCTTGAATCACTCTGTCCTCCTG +
Preference number: 2 (lower is better)
Translates to: RKRTILPETPFRERE*VNSSSWVLNHSVLL
Trigger: CAGGAGGACAGAGTGATTCAAGACCCAACTACTAGAATTCACCAACTCTCTCTCTCTGAATGGAGTCTCTGGCAAGATCGTCCGCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR GCA 90 bp AAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGACATATGACTTGCTCACCTTaGTTTCTTAGACCCCAGGAG +
Preference number: 2 (lower is better)
Translates to: KAETLDPLKLPDGVAAGHMTCSP*FLRPQE
Trigger: CTCCTGGGGTCTAAGAAAGCAAGGTGAGCAAGTCAT...ATGTCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR-3UTR GCA 90 bp GCATTATTTGTGTGGTGGCCAGACAGTTTTCCGATGAACATGGAGCTCACCAACGTGAGACTGAGGCAATaGCACTCCTTTAACCTGGTC +
Preference number: 2 (lower is better)
Translates to: ALFVWWPDSFPMNMELTNVRLRQ*HSFNLV
Trigger: GACCAGGTTAAAGGAGTGGCATTGCCTCAGTCTCAC...GTTGGTGAGCTCCATGTTCATCGGAAAACTGTCTGGCCACCACACAAATAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR CCA 90 bp AAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGACATCCAAAAGTCAAGCTGTaGAGGAAAGGGCTTACTTGG +
Preference number: 2 (lower is better)
Translates to: KAETLDPLKLPDGVAAGHPKVKL*RKGLTW
Trigger: CCAAGTAAGCCCTTTCCTCCACAGCTTGACTTTTGG...ATGTCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR-3UTR GCA 90 bp GAACTCAAGCAGGGCTTGCACTTAGAGGCAGGAGCTGATGCAGAGGCCATGGAGTTTGCCTTACTTAGATaGTTAAATCACTCTGACCAA +
Preference number: 2 (lower is better)
Translates to: ELKQGLHLEAGADAEAMEFALLR*LNHSDQ
Trigger: TTGGTCAGAGTGATTTAAGCATCTAAGTAAGGCAAA...CTCCATGGCCTCTGCATCAGCTCCTGCCTCTAAGTGCAAGCCCTGCTTGAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR-3UTR GCA 90 bp GCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACTTATGACTTGCTCACCTTaGTTTCTTAGACCCCAGGAG +
Preference number: 2 (lower is better)
Translates to: AAMQHHNQKSSCGGKGLLMTCSP*FLRPQE
Trigger: CTCCTGGGGTCTAAGAAAGCAAGGTGAGCAAGTCAT...AAGTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR-3UTR CCA 90 bp GTAGAGTCTAGTGTCTTGAGCATGTGTGCTCCTGTCTTGGAGCTCGCGTGTGACTGGACTACAGTTGGATaGAAGGTTTATTTGGTGGTA +
Preference number: 2 (lower is better)
Translates to: VESSVLSMCAPVLELACDWTTVG*KVYLVV
Trigger: TACCACCAAATAAACCTTCCATCCAACTGTAGTCCA...GTCACACGCGAGCTCCAAGACAGGAGCACACATGCTCAAGACACTAGACTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR TCA 90 bp AGATGTAGGATGAAGTATGTCTGCTGGGACTGGAGAAAGTATGAAGACGGGGAACCAACTTTGCCATCCTaGTACAGCGTTTGCAAACTC +
Preference number: 2 (lower is better)
Translates to: RCRMKYVCWDWRKYEDGEPTLPS*YSVCKL
Trigger: GAGTTTGCAAACGCTGTATCAGGATGGCAAAGTTGG...TTCCCCGTCTTCATACTTTCTCCAGTCCCAGCAGACATACTTCATCCTACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR-3UTR TCA 90 bp AAGAAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGAGCTTCTATGCTCTTTTaGGACAGGATCTTGTTAAGG +
Preference number: 2 (lower is better)
Translates to: KKAETLDPLKLPDGVAAGASMLF*DRILLR
Trigger: CCTTAACAAGATCCTGTCTCAAAAGAGCATAGAAGC...TCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR-3UTR GCA 90 bp GACCATTCGGCTGCTTACGATGTAGTCACAGCCATTAAGAGGACAAATCTCTACCTGGCCTTTTCTTCCTaGTCTACAGGGTTTTTCCCT +
Preference number: 2 (lower is better)
Translates to: DHSAAYDVVTAIKRTNLYLAFSS*STGFFP
Trigger: AGGGAAAAACCCTGTAGAGCAGGAAGAAAAGGCCAG...GTAGAGATTTGTCCTCTTAATGGCTGTGACTACATCGTAAGCAGCCGAATGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR TCA 90 bp CAGGAGTATGTCATCAAAGATGACTCATCTTTTCTGTGTATGAATGAAGATGTGCAGCCAGCACAGGGATaGCCTGAGGTTGTCAGGCTT +
Preference number: 2 (lower is better)
Translates to: QEYVIKDDSSFLCMNEDVQPAQG*PEVVRL
Trigger: AAGCCTGACAACCTCAGGTCATCCCTGTGCTGGCTG...CACATCTTCATTCATACACAGAAAAGATGAGTCATCTTTGATGACATACTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR-3UTR CCA 90 bp AAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGACATATGAAGTATGTCTGCTaGGACTGGAGAAAGTATGAA +
Preference number: 2 (lower is better)
Translates to: KAETLDPLKLPDGVAAGHMKYVC*DWRKYE
Trigger: TTCATACTTTCTCCAGTCCCAGCAGACATACTTCAT...ATGTCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR CAA 90 bp GTCTCCTGCTTTTTCTCTGTCTTTTTCCACAATCACACATATCCTTaGAAACATGCTCTGCAGGCGCTGCATCTGCTCGATGAACTTGTT +
Preference number: 2 (lower is better)
Translates to: VSCFFSVFFHNHTYP*KHALQALHLLDELV
Trigger: AACAAGTTCATCGAGCAGATGCAGCGCCTGCAGAGCATGTTTCAAAGGATATGTGTGATTGTGGAAAAAGACAGAGAAAAAGCAGGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR TCA 90 bp AGATGTAGGATGAAGTATGTCTGCTGGGACTGGAGAAAGTATGAAGACGGGGAAGCTTCTATGCTCTTTTaGGACAGGATCTTGTTAAGG +
Preference number: 2 (lower is better)
Translates to: RCRMKYVCWDWRKYEDGEASMLF*DRILLR
Trigger: CCTTAACAAGATCCTGTCTCAAAAGAGCATAGAAGC...TTCCCCGTCTTCATACTTTCTCCAGTCCCAGCAGACATACTTCATCCTACATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR-3UTR TCA 90 bp GTACTTAGTGCTCATCAATGGACTGCGTACAGACTTCATGTAAATAGCTCTCATGGTTATCCTCTTCAGTaGCAGCACCCAAGATGGAGA +
Preference number: 2 (lower is better)
Translates to: VLSAHQWTAYRLHVNSSHGYPLQ*QHPRWR
Trigger: TCTCCATCTTGGGTGCTGTCACTGAAGAGGATAACC...ATGAGAGCTATTTACATGAAGTCTGTACGCAGTCCATTGATGAGCACTAAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR GCA 90 bp AAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGACATGAAGTAATTGCTAACTaGCCACCAGCTGATAAAATT +
Preference number: 2 (lower is better)
Translates to: KAETLDPLKLPDGVAAGHEVIAN*PPADKI
Trigger: AATTTTATCAGCTGGTGGGCAGTTAGCAATTACTTC...ATGTCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR-3UTR GCA 90 bp GTACTTAGTGCTCATCAATGGACTGCGTACAGACTTCATGTAAATAGCTCTCATCGTCAAGGAGCCTCCTaGATCTACACTCGGTCTAAA +
Preference number: 2 (lower is better)
Translates to: VLSAHQWTAYRLHVNSSHRQGAS*IYTRSK
Trigger: TTTAGACCGAGTGTAGATGCAGGAGGCTCCTTGACG...ATGAGAGCTATTTACATGAAGTCTGTACGCAGTCCATTGATGAGCACTAAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR CCA 90 bp AGGATGAAGTATGTCTGCTGGGACTGGAGAAAGTATGAAGACGGGGAAAGTCTCTGGACTACAGTTGGATaGAAGGTTTATTTGGTGGTA +
Preference number: 2 (lower is better)
Translates to: RMKYVCWDWRKYEDGESLWTTVG*KVYLVV
Trigger: TACCACCAAATAAACCTTCCATCCAACTGTAGTCCA...GAGACTTTCCCCGTCTTCATACTTTCTCCAGTCCCAGCAGACATACTTCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR-3UTR TCA 90 bp AGATGTAGGATGAAGTATGTCTGCTGGGACTGGAGAAAGTATGAAGACGGGGAATTTTCTGTGTATGAATaGAGATGTGAACACACAGGC +
Preference number: 2 (lower is better)
Translates to: RCRMKYVCWDWRKYEDGEFSVYE*RCEHTG
Trigger: GCCTGTGTGTTCACATCTTCATTCATACACAGAAAA...TTCCCCGTCTTCATACTTTCTCCAGTCCCAGCAGACATACTTCATCCTACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR-3UTR GCA 90 bp GTACTTAGTGCTCATCAATGGACTGCGTACAGACTTCATGTAAATAGCTCTCATATCTCCTTATCAGAATaGCTTCCAGACACATCGGCC +
Preference number: 2 (lower is better)
Translates to: VLSAHQWTAYRLHVNSSHISLSE*LPDTSA
Trigger: GGCCGATGTGTCTGGAAGGCATTCTGATAAGGAGAT...ATGAGAGCTATTTACATGAAGTCTGTACGCAGTCCATTGATGAGCACTAAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR CCA 90 bp GTATTCCAGGAGTATGTCATCAAAGATGACTCATCTTTTCTGTGTATGAATGAACTGATGCAGAGGCCATaGAGGGAGGGATGCTGCTTA +
Preference number: 2 (lower is better)
Translates to: VFQEYVIKDDSSFLCMNELMQRP*REGCCL
Trigger: TAAGCAGCATCCCTCCCTCCATGGCCTCTGCATCAG...TTCATTCATACACAGAAAAGATGAGTCATCTTTGATGACATACTCCTGGAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR-3UTR CCA 90 bp GCATTATTTGTGTGGTGGCCAGACAGTTTTCCGATGAACATGGAGCTCACCAACAGGAAAGGGCTTACTTaGCTTATATTTCCAGACTAT +
Preference number: 2 (lower is better)
Translates to: ALFVWWPDSFPMNMELTNRKGLT*LIFPDY
Trigger: ATAGTCTGGAAATATAAGCCAAGTAAGCCCTTTCCT...GTTGGTGAGCTCCATGTTCATCGGAAAACTGTCTGGCCACCACACAAATAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR-3UTR CCA 90 bp GGAGCCTTTTCTGATGTTCCTGTTACGACCCTTGAAGTGTTCCAATCTTGGACAATGAAGTATGTCTGCTaGGACTGGAGAAAGTATGAA +
Preference number: 2 (lower is better)
Translates to: GAFSDVPVTTLEVFQSWTMKYVC*DWRKYE
Trigger: TTCATACTTTCTCCAGTCCCAGCAGACATACTTCAT...TGTCCAAGATTGGAACACTTCAAGGGTCGTAACAGGAACATCAGAAAAGGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR GCA 90 bp ATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACTTGGCTTATATTTCCAGAACAATGTCAGTGCACTaGCTAAGAAGGCAGAGACTT +
Preference number: 2 (lower is better)
Translates to: ITKSQAVEERAYLAYISRTMSVH*LRRQRL
Trigger: AAGTCTCTGCCTTCTTAGGCAGTGCACTGACATTGT...TCTGGAAATATAAGCCAAGTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR-3UTR GCA 90 bp ATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACTTGGCTTATATTTCCAGAATATCCTTTGAAACATaGTCTGCAGGCGCTGCATCT +
Preference number: 2 (lower is better)
Translates to: ITKSQAVEERAYLAYISRISFET*SAGAAS
Trigger: AGATGCAGCGCCTGCAGAGCATGTTTCAAAGGATAT...TCTGGAAATATAAGCCAAGTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR CCA 90 bp GTCTCTTCTACAGAAAATCCTAGATGGCCCAGTCTTGGGTTCAATGCCATTTTGGTGAATTCTAGTAGTTaGGTCTTGAATCACTCTGTC +
Preference number: 2 (lower is better)
Translates to: VSSTENPRWPSLGFNAILVNSSS*VLNHSV
Trigger: GACAGAGTGATTCAAGACCCAACTACTAGAATTCAC...CAAAATGGCATTGAACCCAAGACTGGGCCATCTAGGATTTTCTGTAGAAGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR CAA 90 bp CCTTTTCTTCCTGCTCTACAGGGTTTTTCCCTTAGAGAAGTAATCTaGGTCCATTTAGAATCCCTTTGTTTAACAGTGTCAGCATGCTCT +
Preference number: 2 (lower is better)
Translates to: PFLPALQGFSLREVI*VHLESLCLTVSACS
Trigger: AGAGCATGCTGACACTGTTAAACAAAGGGATTCTAAATGGACCAAGATTACTTCTCTAAGGGAAAAACCCTGTAGAGCAGGAAGAAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR TCA 90 bp CAGGAGTATGTCATCAAAGATGACTCATCTTTTCTGTGTATGAATGAAGATGTGCTAGTAGTTGGGTCTTaGATCACTCTGTCCTCCTGT +
Preference number: 2 (lower is better)
Translates to: QEYVIKDDSSFLCMNEDVLVVGS*ITLSSC
Trigger: ACAGGAGGACAGAGTGATTCAAGACCCAACTACTAG...CACATCTTCATTCATACACAGAAAAGATGAGTCATCTTTGATGACATACTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR TCA 90 bp ATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACTTGGCTTATATTTCCAGAAGGAGCGTGATATTTTaGGCAGACATCTTCCATTTG +
Preference number: 2 (lower is better)
Translates to: ITKSQAVEERAYLAYISRRSVIF*ADIFHL
Trigger: CAAATGGAAGATGTCTGCTCAAAATATCACGCTCCT...TCTGGAAATATAAGCCAAGTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR GCA 90 bp AAACTGCTCAGCAGCTCGATCGGTGAACAGCTCTTCTTCCAATGGAAGAAACAATTTGCCTTACTTAGATaGTTAAATCACTCTGACCAA +
Preference number: 2 (lower is better)
Translates to: KLLSSSIGEQLFFQWKKQFALLR*LNHSDQ
Trigger: TTGGTCAGAGTGATTTAAGCATCTAAGTAAGGCAAA...TTGTTTCTTCCATTGGAAGAAGAGCTGTTCACCGATCGAGCTGCTGAGCAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR GCA 90 bp GTCTCTTCTACAGAAAATCCTAGATGGCCCAGTCTTGGGTTCAATGCCATTTTGTACATCTTGCTTCTATaGTCTTTTGAGACAGGATCT +
Preference number: 2 (lower is better)
Translates to: VSSTENPRWPSLGFNAILYILLL*SFETGS
Trigger: AGATCCTGTCTCAAAAGAGCATAGAAGCAAGATGTA...CAAAATGGCATTGAACCCAAGACTGGGCCATCTAGGATTTTCTGTAGAAGAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR GCA 90 bp ATGAATTCTGAAGTTTCTGTCAGATGTAGGATGAAGTATGTCTGCTGGGACTGGCCTTATTATGAGTGGTaGCAGGGAGACAGTATTTTT +
Preference number: 2 (lower is better)
Translates to: MNSEVSVRCRMKYVCWDWPYYEW*QGDSIF
Trigger: AAAAATACTGTCTCCCTGGCACCACTCATAATAAGG...CCAGTCCCAGCAGACATACTTCATCCTACATCTGACAGAAACTTCAGAATTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR TCA 90 bp TTCTATGCTCTTTTGAGACAGGATCTTGTTAAGGCCAAGGCTAGCCTTATAGCACACATGATTTATTTGTaGCCTGACACTCCATTTGTA +
Preference number: 2 (lower is better)
Translates to: FYALLRQDLVKAKASLIAHMIYL*PDTPFV
Trigger: TACAAATGGAGTGTCAGGTCACAAATAAATCATGTG...TGCTATAAGGCTAGCCTTGGCCTTAACAAGATCCTGTCTCAAAAGAGCATAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR CCA 90 bp ATGAATTCTGAAGTTTCTGTCAGATGTAGGATGAAGTATGTCTGCTGGGACTGGAGGAAAGGGCTTACTTaGCTTATATTTCCAGACTAT +
Preference number: 2 (lower is better)
Translates to: MNSEVSVRCRMKYVCWDWRKGLT*LIFPDY
Trigger: ATAGTCTGGAAATATAAGCCAAGTAAGCCCTTTCCT...CCAGTCCCAGCAGACATACTTCATCCTACATCTGACAGAAACTTCAGAATTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR-3UTR CCA 90 bp ATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACTTGGCTTATATTTCCAGATGGCCTACAATGTTTTaGTATTCCAGGAGTATGTCA +
Preference number: 2 (lower is better)
Translates to: ITKSQAVEERAYLAYISRWPTMF*YSRSMS
Trigger: TGACATACTCCTGGAATACCAAAACATTGTAGGCCA...TCTGGAAATATAAGCCAAGTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR CCA 72 bp CAGAGCTGGCCCTGCTGTGTGTGCTCAGCAGCAGCGTaGCCACCAGCAACGGAGTGTTCTCTGTCCTTCGGG +
Preference number: 3 (lower is better)
Translates to: QSWPCCVCSAAA*PPATECSLSFG
Trigger: CCCGAAGGACAGAGAACACTCCGTTGCTGGTGGCCACGCTGCTGCTGAGCACACACAGCAGGGCCAGCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR CCA 72 bp GCGACCACTGCGCTGTCTCAGTTGGGATTGGTGATATaGCTCTACCCAGTGGACCTGAAGCGCCACCGGCAT +
Preference number: 3 (lower is better)
Translates to: ATTALSQLGLVI*LYPVDLKRHRH
Trigger: ATGCCGGTGGCGCTTCAGGTCCACTGGGTAGAGCCATATCACCAATCCCAACTGAGACAGCGCAGTGGTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR GCA 72 bp GAAGCGCCACCGGCATCCTTTATCTCCTTATCAGAATaGCTTCCAGACACATCGGCCGCTCCCAGGGTGCGA +
Preference number: 3 (lower is better)
Translates to: EAPPASFISLSE*LPDTSAAPRVR
Trigger: TCGCACCCTGGGAGCGGCCGATGTGTCTGGAAGGCATTCTGATAAGGAGATAAAGGATGCCGGTGGCGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR CCA 72 bp GATCCCACCTACATCTGCCATCCTTTCACCACTGGGTaGGTCTACCTGGGAATCAGCTTCGGCAGGAGACTG +
Preference number: 3 (lower is better)
Translates to: DPTYICHPFTTG*VYLGISFGRRL
Trigger: CAGTCTCCTGCCGAAGCTGATTCCCAGGTAGACCCACCCAGTGGTGAAAGGATGGCAGATGTAGGTGGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR CCA 72 bp TGGAGATCCCACCTACATCTGCCATCCTTTCACCACTaGGTGGGTCTACCTGGGAATCAGCTTCGGCAGGAG +
Preference number: 3 (lower is better)
Translates to: WRSHLHLPSFHH*VGLPGNQLRQE
Trigger: CTCCTGCCGAAGCTGATTCCCAGGTAGACCCACCCAGTGGTGAAAGGATGGCAGATGTAGGTGGGATCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR GCA 72 bp CTGCTTATTGGCCTGCTTCCCATGACTTGCTCACCTTaGTTTCTTAGACCCCAGGAGCAGCAGCCCAGGGAT +
Preference number: 3 (lower is better)
Translates to: LLIGLLPMTCSP*FLRPQEQQPRD
Trigger: ATCCCTGGGCTGCTGCTCCTGGGGTCTAAGAAAGCAAGGTGAGCAAGTCATGGGAAGCAGGCCAATAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR GCA 72 bp CAGAATGCCTTCCAGACACATCGGCCGCTCCCAGGGTaGGAGTCCTATCAGATGCACCTGCTAGCATTTCAT +
Preference number: 3 (lower is better)
Translates to: QNAFQTHRPLPG*ESYQMHLLAFH
Trigger: ATGAAATGCTAGCAGGTGCATCTGATAGGACTCGCACCCTGGGAGCGGCCGATGTGTCTGGAAGGCATTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR GCA 72 bp GCGTGTGACTTAGACAGCGGTGTGCTCCTGACTCTCTaGTTCACTGGCGAGGATGAGGCAACGTGGAAAGAA +
Preference number: 3 (lower is better)
Translates to: ACDLDSGVLLTL*FTGEDEATWKE
Trigger: TTCTTTCCACGTTGCCTCATCCTCGCCAGTGAAGCAGAGAGTCAGGAGCACACCGCTGTCTAAGTCACACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR GCA 72 bp TGCAGATGTCTAGGGGCTGTATGTCCCTCAGCCACATaGAGGAGTGAAGTAGAACAGGGTGCTGCTGAGGTG +
Preference number: 3 (lower is better)
Translates to: CRCLGAVCPSAT*RSEVEQGAAEV
Trigger: CACCTCAGCAGCACCCTGTTCTACTTCACTCCTGCATGTGGCTGAGGGACATACAGCCCCTAGACATCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR CCA 72 bp ACATCTGCCATCCTTTCACCACTGGGTGGGTCTACCTaGGAATCAGCTTCGGCAGGAGACTGTCCATCAGCA +
Preference number: 3 (lower is better)
Translates to: TSAILSPLGGST*ESASAGDCPSA
Trigger: TGCTGATGGACAGTCTCCTGCCGAAGCTGATTCCCAGGTAGACCCACCCAGTGGTGAAAGGATGGCAGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR TCA 72 bp ATACTGGGTTGCACCTGTAGTCTCTGCCTGGATGACTaGTTCCACGATGGATCAGAAAGGACCTGGGGAGGC +
Preference number: 3 (lower is better)
Translates to: ILGCTCSLCLDD*FHDGSERTWGG
Trigger: GCCTCCCCAGGTCCTTTCTGATCCATCGTGGAATCAGTCATCCAGGCAGAGACTACAGGTGCAACCCAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR GCA 72 bp TGCGCCGAGGGGACTGATGCACAAAGACCTGATCGCTaGTCTTGGTCTCTTCTACAGAAAATCCTAGATGGC +
Preference number: 3 (lower is better)
Translates to: CAEGTDAQRPDR*SWSLLQKILDG
Trigger: GCCATCTAGGATTTTCTGTAGAAGAGACCAAGAGCAGCGATCAGGTCTTTGTGCATCAGTCCCCTCGGCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR GCA 72 bp GTCCGGTCATTTACAAAGTCGAGCAGGGAGGAATCCTaGTCGTTCTCAGACTCATCCTCCTCATCTGCTGAG +
Preference number: 3 (lower is better)
Translates to: VRSFTKSSREES*SFSDSSSSSAE
Trigger: CTCAGCAGATGAGGAGGATGAGTCTGAGAACGAGCAGGATTCCTCCCTGCTCGACTTTGTAAATGACCGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR CCA 72 bp CTGACTCTCTGCTTCACTGGCGAGGATGAGGCAACGTaGAAAGAAGCATATTCCTTGTTCTGTGCCCAAGGC +
Preference number: 3 (lower is better)
Translates to: LTLCFTGEDEAT*KEAYSLFCAQG
Trigger: GCCTTGGGCACAGAACAAGGAATATGCTTCTTTCCACGTTGCCTCATCCTCGCCAGTGAAGCAGAGAGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR CAA 90 bp TTGCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACCTGAGGTTGTCAGGCTaGGGCAGCTTCCAGCCCTTT +
Preference number: 3 (lower is better)
Translates to: LLRCNTITKSQAVEERAYLRLSG*GSFQPF
Trigger: AAAGGGCTGGAAGCTGCCCAAGCCTGACAACCTCAG...GTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR-3UTR CAA 90 bp CAGGAGACTGTCCATCAGCATCGGAAGAACCTGCATCCCCATCCTCACCCTCACGAGGAAAGGGCTTACTaGGCTTATATTTCCAGACTA +
Preference number: 3 (lower is better)
Translates to: QETVHQHRKNLHPHPHPHEERAY*AYISRL
Trigger: TAGTCTGGAAATATAAGCCAAGTAAGCCCTTTCCTC...GTGAGGGTGAGGATGGGGATGCAGGTTCTTCCGATGCTGATGGACAGTCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR CAA 90 bp GTAGAGTCTAGTGTCTTGAGCATGTGTGCTCCTGTCTTGGAGCTCGCGTGTGACTCTAGTAGTTGGGTCTaGAATCACTCTGTCCTCCTG +
Preference number: 3 (lower is better)
Translates to: VESSVLSMCAPVLELACDSSSWV*NHSVLL
Trigger: CAGGAGGACAGAGTGATTCAAGACCCAACTACTAGA...GTCACACGCGAGCTCCAAGACAGGAGCACACATGCTCAAGACACTAGACTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR GCA 72 bp GAAGCATATTCCTTGTTCTGTGCCCAAGGCGACCACTaGGCTGTCTCAGTTGGGATTGGTGATATGGCTCTA +
Preference number: 3 (lower is better)
Translates to: EAYSLFCAQGDH*AVSVGIGDMAL
Trigger: TAGAGCCATATCACCAATCCCAACTGAGACAGCGCAGTGGTCGCCTTGGGCACAGAACAAGGAATATGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR CCA 72 bp GAGGGGACTGATGCACAAAGACCTGATCGCTGCTCTTaGTCTCTTCTACAGAAAATCCTAGATGGCCCAGTC +
Preference number: 3 (lower is better)
Translates to: EGTDAQRPDRCS*SLLQKILDGPV
Trigger: GACTGGGCCATCTAGGATTTTCTGTAGAAGAGACCAAGAGCAGCGATCAGGTCTTTGTGCATCAGTCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR CAA 90 bp AGATGTAGGATGAAGTATGTCTGCTGGGACTGGAGAAAGTATGAAGACGGGGAAGAACTCAAGCAGGGCTaGCACTTAGAGGCAGGAGCT +
Preference number: 3 (lower is better)
Translates to: RCRMKYVCWDWRKYEDGEELKQG*HLEAGA
Trigger: AGCTCCTGCCTCTAAGTGCAAGCCCTGCTTGAGTTC...TTCCCCGTCTTCATACTTTCTCCAGTCCCAGCAGACATACTTCATCCTACATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR TCA 72 bp CTTACAGCAGTTTCCCTCCTTCCAGATAGCTTAAGTTaGCTTAAGAGCAGCCAGCACAGGGATGACCTGAGG +
Preference number: 3 (lower is better)
Translates to: LTAVSLLPDSLS*LKSSQHRDDLR
Trigger: CCTCAGGTCATCCCTGTGCTGGCTGCTCTTAAGTCAACTTAAGCTATCTGGAAGGAGGGAAACTGCTGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR TCA 72 bp AGAGACTGGAGGCATTTCACTTGTGAGAGTTTTACCTaGCACACGGAGGGGCTGACTGATACTGTTGAAGGG +
Preference number: 3 (lower is better)
Translates to: RDWRHFTCESFT*HTEGLTDTVEG
Trigger: CCCTTCAACAGTATCAGTCAGCCCCTCCGTGTGTCAGGTAAAACTCTCACAAGTGAAATGCCTCCAGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR CAA 90 bp TTATTTGTGTGGTGGCCAGACAGTTTTCCGATGAACATGGAGCTCACCAACTTTGAACTCAAGCAGGGCTaGCACTTAGAGGCAGGAGCT +
Preference number: 3 (lower is better)
Translates to: LFVWWPDSFPMNMELTNFELKQG*HLEAGA
Trigger: AGCTCCTGCCTCTAAGTGCAAGCCCTGCTTGAGTTC...AAAGTTGGTGAGCTCCATGTTCATCGGAAAACTGTCTGGCCACCACACAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR-3UTR CAA 90 bp AAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGACATACTATAGTCTCTTCTTaGGAGGAAGCGAGGACAGGA +
Preference number: 3 (lower is better)
Translates to: KAETLDPLKLPDGVAAGHTIVSS*EEARTG
Trigger: TCCTGTCCTCGCTTCCTCCAAAGAAGAGACTATAGT...ATGTCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR GCA 72 bp GGCTTGGGCAGCTTCCAGCCCTTTGCCTTACTTAGATaGTTAAATCACTCTGACCAAACCCTTCAAATAGCC +
Preference number: 3 (lower is better)
Translates to: GLGSFQPFALLR*LNHSDQTLQIA
Trigger: GGCTATTTGAAGGGTTTGGTCAGAGTGATTTAAGCATCTAAGTAAGGCAAAGGGCTGGAAGCTGCCCAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR CCA 72 bp TCGCTGCTCTTGGTCTCTTCTACAGAAAATCCTAGATaGCCCAGTCTTGGGTTCAATGCCATTTTGAAGCCC +
Preference number: 3 (lower is better)
Translates to: SLLLVSSTENPR*PSLGFNAILKP
Trigger: GGGCTTCAAAATGGCATTGAACCCAAGACTGGGCCATCTAGGATTTTCTGTAGAAGAGACCAAGAGCAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR CCA 72 bp CATCTGTTATACTGGGTTGCACCTGTAGTCTCTGCCTaGATGACTGATTCCACGATGGATCAGAAAGGACCT +
Preference number: 3 (lower is better)
Translates to: HLLYWVAPVVSA*MTDSTMDQKGP
Trigger: AGGTCCTTTCTGATCCATCGTGGAATCAGTCATCCAGGCAGAGACTACAGGTGCAACCCAGTATAACAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR CAA 90 bp ATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACTTGGCTTATATTTCCAGACTGAGGTTGTCAGGCTaGGGCAGCTTCCAGCCCTTT +
Preference number: 3 (lower is better)
Translates to: ITKSQAVEERAYLAYISRLRLSG*GSFQPF
Trigger: AAAGGGCTGGAAGCTGCCCAAGCCTGACAACCTCAG...TCTGGAAATATAAGCCAAGTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR-3UTR CAA 90 bp TTATTTGTGTGGTGGCCAGACAGTTTTCCGATGAACATGGAGCTCACCAACTTTAGGAAGCGGACGATCTaGCCAGAGACTCCATTCAGA +
Preference number: 3 (lower is better)
Translates to: LFVWWPDSFPMNMELTNFRKRTI*PETPFR
Trigger: TCTGAATGGAGTCTCTGGCAAGATCGTCCGCTTCCT...AAAGTTGGTGAGCTCCATGTTCATCGGAAAACTGTCTGGCCACCACACAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR CAA 90 bp GGAGCCTTTTCTGATGTTCCTGTTACGACCCTTGAAGTGTTCCAATCTTGGACACCACCTGCTTTCTCCTaGGTAGAGTCTAGTGTCTTG +
Preference number: 3 (lower is better)
Translates to: GAFSDVPVTTLEVFQSWTPPAFS*VESSVL
Trigger: CAAGACACTAGACTCTACCAAGGAGAAAGCAGGTGG...TGTCCAAGATTGGAACACTTCAAGGGTCGTAACAGGAACATCAGAAAAGGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR CAA 90 bp AAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGACATGAGGAAAGGGCTTACTaGGCTTATATTTCCAGACTA +
Preference number: 3 (lower is better)
Translates to: KAETLDPLKLPDGVAAGHEERAY*AYISRL
Trigger: TAGTCTGGAAATATAAGCCAAGTAAGCCCTTTCCTC...ATGTCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR TCA 72 bp CCATTTGTAATGTTCCTGGATGGTTATCCTCTTCAGTaGCAGCACCCAAGATGGAGATCCCACCTACATCTG +
Preference number: 3 (lower is better)
Translates to: PFVMFLDGYPLQ*QHPRWRSHLHL
Trigger: CAGATGTAGGTGGGATCTCCATCTTGGGTGCTGTCACTGAAGAGGATAACCATCCAGGAACATTACAAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR TCA 72 bp GACTCACAGAAGGAGGGCCGATCAGAAACCTTATTATaGGTGGTGCCAGGGAGACAGTATTTTTCAGTAGGA +
Preference number: 3 (lower is better)
Translates to: DSQKEGRSETLL*VVPGRQYFSVG
Trigger: TCCTACTGAAAAATACTGTCTCCCTGGCACCACTCATAATAAGGTTTCTGATCGGCCCTCCTTCTGTGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR CAA 90 bp AGGATGAAGTATGTCTGCTGGGACTGGAGAAAGTATGAAGACGGGGAAAGTCTCTTCAGAGAGAGAGAGTaGGTGAATTCTAGTAGTTGG +
Preference number: 3 (lower is better)
Translates to: RMKYVCWDWRKYEDGESLFRERE*VNSSSW
Trigger: CCAACTACTAGAATTCACCAACTCTCTCTCTCTGAA...GAGACTTTCCCCGTCTTCATACTTTCTCCAGTCCCAGCAGACATACTTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR TCA 72 bp AACAGGTCTAGGACTGTGTTCATGCTCTGGGTAGGGTaGACAGGATGCATTATCAAATTCACAACCCTGAGT +
Preference number: 3 (lower is better)
Translates to: NRSRTVFMLWVG*TGCIIKFTTLS
Trigger: ACTCAGGGTTGTGAATTTGATAATGCATCCTGTTCACCCTACCCAGAGCATGAACACAGTCCTAGACCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR TCA 72 bp CATGGTGGTGAAGCAGATTTGATTTTATTATGGCTCTaGGCCTTCACGTTCAAGGTTCTAGGCACGGCATCT +
Preference number: 3 (lower is better)
Translates to: HGGEADLILLWL*AFTFKVLGTAS
Trigger: AGATGCCGTGCCTAGAACCTTGAACGTGAAGGCTCAGAGCCATAATAAAATCAAATCTGCTTCACCACCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR GCA 72 bp GTCCATTTAGAATCCCTTTGTTTAACAGTGTCAGCATaGTCTTCCTCAGACTCTATCACCGTCAAGGAGCCT +
Preference number: 3 (lower is better)
Translates to: VHLESLCLTVSA*SSSDSITVKEP
Trigger: AGGCTCCTTGACGGTGATAGAGTCTGAGGAAGAGCATGCTGACACTGTTAAACAAAGGGATTCTAAATGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR CCA 72 bp GAAGTTTCTGTCAGATGTAGGATGAAGTATGTCTGCTaGGACTGGAGAAAGTATGAAGACGGGGAAAGTCTC +
Preference number: 3 (lower is better)
Translates to: EVSVRCRMKYVC*DWRKYEDGESL
Trigger: GAGACTTTCCCCGTCTTCATACTTTCTCCAGTCCCAGCAGACATACTTCATCCTACATCTGACAGAAACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR CCA 72 bp GCTCTCATTTCAGAATCATTTATAGCCTGTGAAAGCTaGGTCCGGTCATTTACAAAGTCGAGCAGGGAGGAA +
Preference number: 3 (lower is better)
Translates to: ALISESFIACES*VRSFTKSSREE
Trigger: TTCCTCCCTGCTCGACTTTGTAAATGACCGGACCCAGCTTTCACAGGCTATAAATGATTCTGAAATGAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR TCA 72 bp TTTTCTCTGTCTTTTTCCACAATCACACATATCCTTTaGAACATGCTCTGCAGGCGCTGCATCTGCTCGATG +
Preference number: 3 (lower is better)
Translates to: FSLSFSTITHIL*NMLCRRCICSM
Trigger: CATCGAGCAGATGCAGCGCCTGCAGAGCATGTTTCAAAGGATATGTGTGATTGTGGAAAAAGACAGAGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR GCA 72 bp CCAGCACTGTATTGTCTTAGGTTTCTATTGCTGCGATaGAACACCATAACCAAAAGTCAAGCTGTGGAGGAA +
Preference number: 3 (lower is better)
Translates to: PALYCLRFLLLR*NTITKSQAVEE
Trigger: TTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGCAATAGAAACCTAAGACAATACAGTGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR GCA 72 bp TCTGAAGTTTCTGTCAGATGTAGGATGAAGTATGTCTaGTGGGACTGGAGAAAGTATGAAGACGGGGAAAGT +
Preference number: 3 (lower is better)
Translates to: SEVSVRCRMKYV*WDWRKYEDGES
Trigger: ACTTTCCCCGTCTTCATACTTTCTCCAGTCCCAGCAGACATACTTCATCCTACATCTGACAGAAACTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR-3UTR CAA 90 bp CTTGATTGGCTTTTGCAAGACTCTTCTTCATCAACACAAAAACTGTCCTCTAAAAGCTACCTGATGGGGTaGCTGCTGGACATACAAGAG +
Preference number: 3 (lower is better)
Translates to: LDWLLQDSSSSTQKLSSKSYLMG*LLDIQE
Trigger: CTCTTGTATGTCCAGCAGCAACCCCATCAGGTAGCT...TTTAGAGGACAGTTTTTGTGTTGATGAAGAAGAGTCTTGCAAAAGCCAATCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR TCA 72 bp TACAGCGTTTGCAAACTCCTGATAGCCTCCATTTTCTaGAGTCCCCAGCACTGTATTGTCTTAGGTTTCTAT +
Preference number: 3 (lower is better)
Translates to: YSVCKLLIASIF*SPQHCIVLGFY
Trigger: ATAGAAACCTAAGACAATACAGTGCTGGGGACTTCAGAAAATGGAGGCTATCAGGAGTTTGCAAACGCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR TCA 72 bp GCCGACAATTATAAAACTGCTCAGCAGCTCGATCGGTaGACAGCTCTTCTTCCAATGGAAGAAACAAATTTG +
Preference number: 3 (lower is better)
Translates to: ADNYKTAQQLDR*TALLPMEETNL
Trigger: CAAATTTGTTTCTTCCATTGGAAGAAGAGCTGTTCACCGATCGAGCTGCTGAGCAGTTTTATAATTGTCGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR CCA 72 bp CTTCTCACGGACCATTCTGTACTTAGTGCTCATCAATaGACTGCGTACAGACTTCATGTAAATAGCTCTCAT +
Preference number: 3 (lower is better)
Translates to: LLTDHSVLSAHQ*TAYRLHVNSSH
Trigger: ATGAGAGCTATTTACATGAAGTCTGTACGCAGTCCATTGATGAGCACTAAGTACAGAATGGTCCGTGAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR TCA 72 bp GTAAATAGCTCTCATTTCAGAATCATTTATAGCCTGTaGAAGCTGGGTCCGGTCATTTACAAAGTCGAGCAG +
Preference number: 3 (lower is better)
Translates to: VNSSHFRIIYSL*KLGPVIYKVEQ
Trigger: CTGCTCGACTTTGTAAATGACCGGACCCAGCTTTCACAGGCTATAAATGATTCTGAAATGAGAGCTATTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR TCA 72 bp TTGATTCAACACCAGTACATGGTGGTGAAGCAGATTTaGTTTTATTATGGCTCTGAGCCTTCACGTTCAAGG +
Preference number: 3 (lower is better)
Translates to: LIQHQYMVVKQI*FYYGSEPSRSR
Trigger: CCTTGAACGTGAAGGCTCAGAGCCATAATAAAATCAAATCTGCTTCACCACCATGTACTGGTGTTGAATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR TCA 72 bp CAGCCATTAAGAGGACAAATCTCTACTTGTAACCCATaGACTGTTCTTAGCGAAGAGATTACTTCCAAACCG +
Preference number: 3 (lower is better)
Translates to: QPLRGQISTCNP*TVLSEEITSKP
Trigger: CGGTTTGGAAGTAATCTCTTCGCTAAGAACAGTTCATGGGTTACAAGTAGAGATTTGTCCTCTTAATGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR CCA 72 bp TATAGCATGTGCCTACTGCCTTGGCCTACAATGTTTTaGTATTCCAGGAGTATGTCATCAAAGATGACTCAT +
Preference number: 3 (lower is better)
Translates to: YSMCLLPWPTMF*YSRSMSSKMTH
Trigger: ATGAGTCATCTTTGATGACATACTCCTGGAATACCAAAACATTGTAGGCCAAGGCAGTAGGCACATGCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR-3UTR CAA 90 bp GTCTCTTCTACAGAAAATCCTAGATGGCCCAGTCTTGGGTTCAATGCCATTTTGATTTTCAAGGTCTGCTaGTATTTGAGCACAACTGTT +
Preference number: 3 (lower is better)
Translates to: VSSTENPRWPSLGFNAILIFKVC*YLSTTV
Trigger: AACAGTTGTGCTCAAATACAAGCAGACCTTGAAAAT...CAAAATGGCATTGAACCCAAGACTGGGCCATCTAGGATTTTCTGTAGAAGAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR CAA 90 bp ATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACTTGGCTTATATTTCCAGATGCTTCTATGCTCTTTaGAGACAGGATCTTGTTAAG +
Preference number: 3 (lower is better)
Translates to: ITKSQAVEERAYLAYISRCFYAL*RQDLVK
Trigger: CTTAACAAGATCCTGTCTCAAAAGAGCATAGAAGCA...TCTGGAAATATAAGCCAAGTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR TCA 72 bp GATCATGTGTTTCACATCTACTTTACTCACTATGCATaGTTGAGTACACACACGTCTGTACAATGTCAGTGC +
Preference number: 3 (lower is better)
Translates to: DHVFHIYFTHYA*LSTHTSVQCQC
Trigger: GCACTGACATTGTACAGACGTGTGTGTACTCAATCATGCATAGTGAGTAAAGTAGATGTGAAACACATGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR TCA 72 bp CATTTTCATAATGCTTATAAAATGGTGGCAACGATCTaGATGGTCAACTTGATGTGTAGGAAGCGGACGATC +
Preference number: 3 (lower is better)
Translates to: HFHNAYKMVATI*MVNLMCRKRTI
Trigger: GATCGTCCGCTTCCTACACATCAAGTTGACCATTCAGATCGTTGCCACCATTTTATAAGCATTATGAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR TCA 72 bp TCTAATGAGTACCTGGCACATGATTTATTTGTGACCTaGCACTCCATTTGTAATGTTCCTGGATGGTTATCC +
Preference number: 3 (lower is better)
Translates to: SNEYLAHDLFVT*HSICNVPGWLS
Trigger: GGATAACCATCCAGGAACATTACAAATGGAGTGTCAGGTCACAAATAAATCATGTGCCAGGTACTCATTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR CCA 72 bp TCATCAGTGAACAATACTGGGGGTTCACTATCATCATaGCTGTTCTTGTCAACGAAGTTATTTTCAAGGTCT +
Preference number: 3 (lower is better)
Translates to: SSVNNTGGSLSS*LFLSTKLFSRS
Trigger: AGACCTTGAAAATAACTTCGTTGACAAGAACAGCCATGATGATAGTGAACCCCCAGTATTGTTCACTGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR TCA 72 bp CATCTTCAAATAATAGTAAGCTTTCATCTTCATCAGTaGACAATACTGGGGGTTCACTATCATCATGGCTGT +
Preference number: 3 (lower is better)
Translates to: HLQIIVSFHLHQ*TILGVHYHHGC
Trigger: ACAGCCATGATGATAGTGAACCCCCAGTATTGTTCACTGATGAAGATGAAAGCTTACTATTATTTGAAGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR-3UTR CAA 90 bp CTTGATTGGCTTTTGCAAGACTCTTCTTCATCAACACAAAAACTGTCCTCTAAACTTAGAGAAGTAATCTaGGTCCATTTAGAATCCCTT +
Preference number: 3 (lower is better)
Translates to: LDWLLQDSSSSTQKLSSKLREVI*VHLESL
Trigger: AAGGGATTCTAAATGGACCAAGATTACTTCTCTAAG...TTTAGAGGACAGTTTTTGTGTTGATGAAGAAGAGTCTTGCAAAAGCCAATCAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR TCA 72 bp AAGGTCTGCTTGTATTTGAGCACAACTGTTAGATCCTaGATTTTGATATTTAATATTATGGCCTTCGCTATC +
Preference number: 3 (lower is better)
Translates to: KVCLYLSTTVRS*ILIFNIMAFAI
Trigger: GATAGCGAAGGCCATAATATTAAATATCAAAATTCAGGATCTAACAGTTGTGCTCAAATACAAGCAGACCTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp GCCATCCTTTCACCACTGGGTGGGTCTACCTGGGAATCAGCTTCGGCAGGAGACGCACGGGGCAATTGGTaGGGTAGATCCACAGGGCTC +
Preference number: 4 (lower is better)
Translates to: AILSPLGGSTWESASAGDARGNW*GRSTGL
Trigger: GAGCCCTGTGGATCTACCCCACCAATTGCCCCGTGC...GTCTCCTGCCGAAGCTGATTCCCAGGTAGACCCACCCAGTGGTGAAAGGATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR GCA 90 bp CAGGAGACTGTCCATCAGCATCGGAAGAACCTGCATCCCCATCCTCACCCTCACTCCTGCCTTGCCGTTTaGGGCCAGTTCTACCCATGC +
Preference number: 4 (lower is better)
Translates to: QETVHQHRKNLHPHPHPHSCLAV*GQFYPC
Trigger: GCATGGGTAGAACTGGCCGCAAACGGCAAGGCAGGA...GTGAGGGTGAGGATGGGGATGCAGGTTCTTCCGATGCTGATGGACAGTCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp GGCCTGCTTCCCATGACTTGCTCACCTTGCTTTCTTAGACCCCAGGAGCAGCAGAAGCCGAAGCATCGCTaGTGCTGGCTGGTGCAAACG +
Preference number: 4 (lower is better)
Translates to: GLLPMTCSPCFLRPQEQQKPKHR*CWLVQT
Trigger: CGTTTGCACCAGCCAGCACCAGCGATGCTTCGGCTT...CTGCTGCTCCTGGGGTCTAAGAAAGCAAGGTGAGCAAGTCATGGGAAGCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR CAA 72 bp AGCAGCCAGCACAGGGATGACCTGAGGTTGTCAGGCTaGGGCAGCTTCCAGCCCTTTGCCTTACTTAGATGC +
Preference number: 4 (lower is better)
Translates to: SSQHRDDLRLSG*GSFQPFALLRC
Trigger: GCATCTAAGTAAGGCAAAGGGCTGGAAGCTGCCCAAGCCTGACAACCTCAGGTCATCCCTGTGCTGGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR CAA 72 bp CTTTGGAGGAAGCGAGGACAGGAACTCAAGCAGGGCTaGCACTTAGAGGCAGGAGCTGATGCAGAGGCCATG +
Preference number: 4 (lower is better)
Translates to: LWRKRGQELKQG*HLEAGADAEAM
Trigger: CATGGCCTCTGCATCAGCTCCTGCCTCTAAGTGCAAGCCCTGCTTGAGTTCCTGTCCTCGCTTCCTCCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp CAGGAGACTGTCCATCAGCATCGGAAGAACCTGCATCCCCATCCTCACCCTCACAGTCCTCATTTCGGCTaGGCTCATTTCTTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: QETVHQHRKNLHPHPHPHSPHFG*AHFLPV
Trigger: CACGGGCAAGAAATGAGCTCAGCCGAAATGAGGACT...GTGAGGGTGAGGATGGGGATGCAGGTTCTTCCGATGCTGATGGACAGTCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR CAA 72 bp GGCGAGGATGAGGCAACGTGGAAAGAAGCATATTCCTaGTTCTGTGCCCAAGGCGACCACTGCGCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: GEDEATWKEAYS*FCAQGDHCAVS
Trigger: TGAGACAGCGCAGTGGTCGCCTTGGGCACAGAACAAGGAATATGCTTCTTTCCACGTTGCCTCATCCTCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR GCA 90 bp GCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACTTGCCCAGAGCTGGCCCTaGTGTGTGTGCTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: AAMQHHNQKSSCGGKGLLAQSWP*CVCSAA
Trigger: TGCTGCTGAGCACACACAGCAGGGCCAGCTCTGGGC...AAGTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR GCA 90 bp GAACTCAAGCAGGGCTTGCACTTAGAGGCAGGAGCTGATGCAGAGGCCATGGAGGCCCTGTTTCCTTCTTaGAGATGTCTAGGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: ELKQGLHLEAGADAEAMEALFPS*RCLGAV
Trigger: TACAGCCCCTAGACATCTGCAAGAAGGAAACAGGGC...CTCCATGGCCTCTGCATCAGCTCCTGCCTCTAAGTGCAAGCCCTGCTTGAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR GCA 90 bp GGCCTGCTTCCCATGACTTGCTCACCTTGCTTTCTTAGACCCCAGGAGCAGCAGTGCAGGCGCTGCATCTaGTCGATGAACTTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: GLLPMTCSPCFLRPQEQQCRRCI*SMNLFL
Trigger: CAAGAACAAGTTCATCGAGCAGATGCAGCGCCTGCA...CTGCTGCTCCTGGGGTCTAAGAAAGCAAGGTGAGCAAGTCATGGGAAGCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
3UTR CAA 72 bp GTAGAGTCTAGTGTCTTGAGCATGTGTGCTCCTGTCTaGGAGCTCGCGTGTGACTTAGACAGCGGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: VESSVLSMCAPV*ELACDLDSGVL
Trigger: GAGCACACCGCTGTCTAAGTCACACGCGAGCTCCAAGACAGGAGCACACATGCTCAAGACACTAGACTCTAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp GGCCTGCTTCCCATGACTTGCTCACCTTGCTTTCTTAGACCCCAGGAGCAGCAGCTAGTAGTTGGGTCTTaGATCACTCTGTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GLLPMTCSPCFLRPQEQQLVVGS*ITLSSC
Trigger: ACAGGAGGACAGAGTGATTCAAGACCCAACTACTAG...CTGCTGCTCCTGGGGTCTAAGAAAGCAAGGTGAGCAAGTCATGGGAAGCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR TCA 90 bp GCATTATTTGTGTGGTGGCCAGACAGTTTTCCGATGAACATGGAGCTCACCAACAGTCTGAGAGTCCACTaGGAGACGGGGGAGAACGGG +
Preference number: 4 (lower is better)
Translates to: ALFVWWPDSFPMNMELTNSLRVH*ETGENG
Trigger: CCCGTTCTCCCCCGTCTCTCAGTGGACTCTCAGACT...GTTGGTGAGCTCCATGTTCATCGGAAAACTGTCTGGCCACCACACAAATAATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR TCA 90 bp GGCCTGCTTCCCATGACTTGCTCACCTTGCTTTCTTAGACCCCAGGAGCAGCAGCTGTCAGCCTTCAACTaGACTGGATGGTTCCCATAT +
Preference number: 4 (lower is better)
Translates to: GLLPMTCSPCFLRPQEQQLSAFN*TGWFPY
Trigger: ATATGGGAACCATCCAGTTCAGTTGAAGGCTGACAG...CTGCTGCTCCTGGGGTCTAAGAAAGCAAGGTGAGCAAGTCATGGGAAGCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR GCA 90 bp GCCATCCTTTCACCACTGGGTGGGTCTACCTGGGAATCAGCTTCGGCAGGAGACAGCATAGTTCCCAAGTaGCTTATGAGCTTCATCCAC +
Preference number: 4 (lower is better)
Translates to: AILSPLGGSTWESASAGDSIVPK*LMSFIH
Trigger: GTGGATGAAGCTCATAAGGCACTTGGGAACTATGCT...GTCTCCTGCCGAAGCTGATTCCCAGGTAGACCCACCCAGTGGTGAAAGGATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR GCA 90 bp GGCCTGCTTCCCATGACTTGCTCACCTTGCTTTCTTAGACCCCAGGAGCAGCAGCAAAGACCTGATCGCTaGTCTTGGTCTCTTCTACAG +
Preference number: 4 (lower is better)
Translates to: GLLPMTCSPCFLRPQEQQQRPDR*SWSLLQ
Trigger: CTGTAGAAGAGACCAAGAGCAGCGATCAGGTCTTTG...CTGCTGCTCCTGGGGTCTAAGAAAGCAAGGTGAGCAAGTCATGGGAAGCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR CCA 90 bp AAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGACATAAGCCGAAGCATCGCTaGTGCTGGCTGGTGCAAACG +
Preference number: 4 (lower is better)
Translates to: KAETLDPLKLPDGVAAGHKPKHR*CWLVQT
Trigger: CGTTTGCACCAGCCAGCACCAGCGATGCTTCGGCTT...ATGTCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp GCATTATTTGTGTGGTGGCCAGACAGTTTTCCGATGAACATGGAGCTCACCAACTGCTCAGCAGCAGCGTaGCCACCAGCAACGGAGTGT +
Preference number: 4 (lower is better)
Translates to: ALFVWWPDSFPMNMELTNCSAAA*PPATEC
Trigger: ACACTCCGTTGCTGGTGGCCACGCTGCTGCTGAGCA...GTTGGTGAGCTCCATGTTCATCGGAAAACTGTCTGGCCACCACACAAATAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR TCA 90 bp AAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGACATGCTTCGTGGGTGCCATaGAAACCACCTTGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: KAETLDPLKLPDGVAAGHASWVP*KPPCQK
Trigger: CTTCTGGCAAGGTGGTTTTCATGGCACCCACGAAGC...ATGTCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp GAACTCAAGCAGGGCTTGCACTTAGAGGCAGGAGCTGATGCAGAGGCCATGGAGATGCTCTGGGTAGGGTaGACAGGATGCATTATCAAA +
Preference number: 4 (lower is better)
Translates to: ELKQGLHLEAGADAEAMEMLWVG*TGCIIK
Trigger: TTTGATAATGCATCCTGTTCACCCTACCCAGAGCAT...CTCCATGGCCTCTGCATCAGCTCCTGCCTCTAAGTGCAAGCCCTGCTTGAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR TCA 90 bp CTGAAGTCCCCAGCACTGTATTGTCTTAGGTTTCTATTGCTGCGATGCAACACCAGAACAGGGTGCTGCTaGGGTGTCACTGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LKSPALYCLRFLLLRCNTRTGCC*GVTVLL
Trigger: CAGGAGCACAGTGACACCTCAGCAGCACCCTGTTCT...GGTGTTGCATCGCAGCAATAGAAACCTAAGACAATACAGTGCTGGGGACTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR GCA 90 bp GGCCTGCTTCCCATGACTTGCTCACCTTGCTTTCTTAGACCCCAGGAGCAGCAGTCATTTACCATGACCTaGGGTGTCAGGAAAAGAACC +
Preference number: 4 (lower is better)
Translates to: GLLPMTCSPCFLRPQEQQSFTMT*GVRKRT
Trigger: GGTTCTTTTCCTGACACCGCAGGTCATGGTAAATGA...CTGCTGCTCCTGGGGTCTAAGAAAGCAAGGTGAGCAAGTCATGGGAAGCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR GCA 90 bp GAACTCAAGCAGGGCTTGCACTTAGAGGCAGGAGCTGATGCAGAGGCCATGGAGAGCATAGTTCCCAAGTaGCTTATGAGCTTCATCCAC +
Preference number: 4 (lower is better)
Translates to: ELKQGLHLEAGADAEAMESIVPK*LMSFIH
Trigger: GTGGATGAAGCTCATAAGGCACTTGGGAACTATGCT...CTCCATGGCCTCTGCATCAGCTCCTGCCTCTAAGTGCAAGCCCTGCTTGAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp ATTGCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTAGGATCAGAAAGGACCTaGGGAGGCACTGAGGACCCG +
Preference number: 4 (lower is better)
Translates to: IAAMQHHNQKSSCGGKGLGSERT*GGTEDP
Trigger: CGGGTCCTCAGTGCCTCCCCAGGTCCTTTCTGATCC...TAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR TCA 90 bp GAACTCAAGCAGGGCTTGCACTTAGAGGCAGGAGCTGATGCAGAGGCCATGGAGTGGATATACGTCTTTTaGATGGCTCCTAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: ELKQGLHLEAGADAEAMEWIYVF*MAPSSS
Trigger: GGAAGAACTAGGAGCCATTCAAAAGACGTATATCCA...CTCCATGGCCTCTGCATCAGCTCCTGCCTCTAAGTGCAAGCCCTGCTTGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp GGCCTGCTTCCCATGACTTGCTCACCTTGCTTTCTTAGACCCCAGGAGCAGCAGTTTTGTGTTTTTCCCTaGAGCATGGCCAACAAAGGT +
Preference number: 4 (lower is better)
Translates to: GLLPMTCSPCFLRPQEQQFCVFP*SMANKG
Trigger: ACCTTTGTTGGCCATGCTTCAGGGAAAAACACAAAA...CTGCTGCTCCTGGGGTCTAAGAAAGCAAGGTGAGCAAGTCATGGGAAGCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp AAGAAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGATGTGAGAGTTTTACCTaGCACACGGAGGGGCTGACT +
Preference number: 4 (lower is better)
Translates to: KKAETLDPLKLPDGVAAGCESFT*HTEGLT
Trigger: AGTCAGCCCCTCCGTGTGTCAGGTAAAACTCTCACA...TCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR TCA 90 bp CAGGAGTATGTCATCAAAGATGACTCATCTTTTCTGTGTATGAATGAAGATGTGGGACCCGGATGGCCCTaGAGCCCAGAGCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: QEYVIKDDSSFLCMNEDVGPGWP*SPELAL
Trigger: CAGGGCCAGCTCTGGGCTTCAGGGCCATCCGGGTCC...CACATCTTCATTCATACACAGAAAAGATGAGTCATCTTTGATGACATACTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR TCA 90 bp GAACTCAAGCAGGGCTTGCACTTAGAGGCAGGAGCTGATGCAGAGGCCATGGAGCCCATATTCTTTCCTTaGTTCAACACCAGTACATGG +
Preference number: 4 (lower is better)
Translates to: ELKQGLHLEAGADAEAMEPIFFP*FNTSTW
Trigger: CCATGTACTGGTGTTGAATCAAGGAAAGAATATGGG...CTCCATGGCCTCTGCATCAGCTCCTGCCTCTAAGTGCAAGCCCTGCTTGAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR GCA 90 bp AAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGACATGGAAGCGGACGATCTTaGCAGAGACTCCATTCAGAG +
Preference number: 4 (lower is better)
Translates to: KAETLDPLKLPDGVAAGHGSGRS*QRLHSE
Trigger: CTCTGAATGGAGTCTCTGGCAAGATCGTCCGCTTCC...ATGTCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR GCA 90 bp GAACTCAAGCAGGGCTTGCACTTAGAGGCAGGAGCTGATGCAGAGGCCATGGAGTTAACAGTGTCAGCATaGTCTTCCTCAGACTCTATC +
Preference number: 4 (lower is better)
Translates to: ELKQGLHLEAGADAEAMELTVSA*SSSDSI
Trigger: GATAGAGTCTGAGGAAGAGCATGCTGACACTGTTAA...CTCCATGGCCTCTGCATCAGCTCCTGCCTCTAAGTGCAAGCCCTGCTTGAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR GCA 90 bp AAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGACATGATCCCACCTACATCTaGCATCCTTTCACCACTGGG +
Preference number: 4 (lower is better)
Translates to: KAETLDPLKLPDGVAAGHDPTYI*HPFTTG
Trigger: CCCAGTGGTGAAAGGATGGCAGATGTAGGTGGGATC...ATGTCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR GCA 90 bp ATGAATTCTGAAGTTTCTGTCAGATGTAGGATGAAGTATGTCTGCTGGGACTGGCGGCCGCTCCCAGGGTaGGAGTCCTATCAGATGCAC +
Preference number: 4 (lower is better)
Translates to: MNSEVSVRCRMKYVCWDWRPLPG*ESYQMH
Trigger: GTGCATCTGATAGGACTCGCACCCTGGGAGCGGCCG...CCAGTCCCAGCAGACATACTTCATCCTACATCTGACAGAAACTTCAGAATTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
3UTR CAA 72 bp ACGACTGTCTACAAGAATGCAAGCCCTGTTTCCTTCTaGCAGATGTCTAGGGGCTGTATGTCCCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: TTVYKNASPVSF*QMSRGCMSLSH
Trigger: GTGGCTGAGGGACATACAGCCCCTAGACATCTGCAAGAAGGAAACAGGGCTTGCATTCTTGTAGACAGTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp GAACTCAAGCAGGGCTTGCACTTAGAGGCAGGAGCTGATGCAGAGGCCATGGAGAAGAAAGAAATACAATaGCCGCATTCCCATTTGCTG +
Preference number: 4 (lower is better)
Translates to: ELKQGLHLEAGADAEAMEKKEIQ*PHSHLL
Trigger: CAGCAAATGGGAATGCGGTCATTGTATTTCTTTCTT...CTCCATGGCCTCTGCATCAGCTCCTGCCTCTAAGTGCAAGCCCTGCTTGAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp TTGCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACCTCAGTTGGGATTGGTaGTATGGCTCTACCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LLRCNTITKSQAVEERAYLSWDW*YGSTQW
Trigger: CCACTGGGTAGAGCCATATCACCAATCCCAACTGAG...GTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR GCA 90 bp TTATTTGTGTGGTGGCCAGACAGTTTTCCGATGAACATGGAGCTCACCAACTTTCAGGGGCTTCGTGGGTaGCATGAAAACCACCTTGCC +
Preference number: 4 (lower is better)
Translates to: LFVWWPDSFPMNMELTNFQGLRG*HENHLA
Trigger: GGCAAGGTGGTTTTCATGGCACCCACGAAGCCCCTG...AAAGTTGGTGAGCTCCATGTTCATCGGAAAACTGTCTGGCCACCACACAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR GCA 90 bp GCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACTTACGACAATCCTGCCTTaGCGTTTGCGGCCAGTTCTA +
Preference number: 4 (lower is better)
Translates to: AAMQHHNQKSSCGGKGLLTTILP*RLRPVL
Trigger: TAGAACTGGCCGCAAACGGCAAGGCAGGATTGTCGT...AAGTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR GCA 90 bp AAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGACATGTGAGACTGAGGCAATaGCACTCCTTTAACCTGGTC +
Preference number: 4 (lower is better)
Translates to: KAETLDPLKLPDGVAAGHVRLRQ*HSFNLV
Trigger: GACCAGGTTAAAGGAGTGGCATTGCCTCAGTCTCAC...ATGTCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR GCA 90 bp TTGCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACAGCAGGGAGGAATCCTaGTCGTTCTCAGACTCATCC +
Preference number: 4 (lower is better)
Translates to: LLRCNTITKSQAVEERAYSREES*SFSDSS
Trigger: GGATGAGTCTGAGAACGAGCAGGATTCCTCCCTGCT...GTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR GCA 90 bp GAACTCAAGCAGGGCTTGCACTTAGAGGCAGGAGCTGATGCAGAGGCCATGGAGTGCTCATCAATGGACTaGGTACAGACTTCATGTAAA +
Preference number: 4 (lower is better)
Translates to: ELKQGLHLEAGADAEAMECSSMD*VQTSCK
Trigger: TTTACATGAAGTCTGTACGCAGTCCATTGATGAGCA...CTCCATGGCCTCTGCATCAGCTCCTGCCTCTAAGTGCAAGCCCTGCTTGAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR CCA 90 bp AGGATGAAGTATGTCTGCTGGGACTGGAGAAAGTATGAAGACGGGGAAAGTCTCACAAGACACTTTACGTaGGTGGCAGGAACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: RMKYVCWDWRKYEDGESLTRHFT*VAGTAP
Trigger: AGGGGCTGTTCCTGCCACCCACGTAAAGTGTCTTGT...GAGACTTTCCCCGTCTTCATACTTTCTCCAGTCCCAGCAGACATACTTCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp GCATTATTTGTGTGGTGGCCAGACAGTTTTCCGATGAACATGGAGCTCACCAACCTGGATGAGGCGGATTaGGCTCTTCTGGGCATCAAA +
Preference number: 4 (lower is better)
Translates to: ALFVWWPDSFPMNMELTNLDEAD*ALLGIK
Trigger: TTTGATGCCCAGAAGAGCCCAATCCGCCTCATCCAG...GTTGGTGAGCTCCATGTTCATCGGAAAACTGTCTGGCCACCACACAAATAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp AAGAAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGAGTCATTTCAGCCATGTaGGACTGTGGAATACCCATC +
Preference number: 4 (lower is better)
Translates to: KKAETLDPLKLPDGVAAGVISAM*DCGIPI
Trigger: GATGGGTATTCCACAGTCTCACATGGCTGAAATGAC...TCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp GTAGAGTCTAGTGTCTTGAGCATGTGTGCTCCTGTCTTGGAGCTCGCGTGTGACAGTGAGTGGTGTATTTaGCCAATTCTCTTACCACCT +
Preference number: 4 (lower is better)
Translates to: VESSVLSMCAPVLELACDSEWCI*PILLPP
Trigger: AGGTGGTAAGAGAATTGGTCAAATACACCACTCACT...GTCACACGCGAGCTCCAAGACAGGAGCACACATGCTCAAGACACTAGACTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp AAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGACATATCATATACCAAGTCTaGGAGTCCACTGAGAGACGG +
Preference number: 4 (lower is better)
Translates to: KAETLDPLKLPDGVAAGHIIYQV*ESTERR
Trigger: CCGTCTCTCAGTGGACTCTCAGACTTGGTATATGAT...ATGTCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR TCA 90 bp ATTGCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTAATCCTCCTCATCTGCTaGGACACAGTCCACATCCTC +
Preference number: 4 (lower is better)
Translates to: IAAMQHHNQKSSCGGKGLILLIC*DTVHIL
Trigger: GAGGATGTGGACTGTGTCTCAGCAGATGAGGAGGAT...TAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR GCA 90 bp ATGAATTCTGAAGTTTCTGTCAGATGTAGGATGAAGTATGTCTGCTGGGACTGGCAGGGGCTTCGTGGGTaGCATGAAAACCACCTTGCC +
Preference number: 4 (lower is better)
Translates to: MNSEVSVRCRMKYVCWDWQGLRG*HENHLA
Trigger: GGCAAGGTGGTTTTCATGGCACCCACGAAGCCCCTG...CCAGTCCCAGCAGACATACTTCATCCTACATCTGACAGAAACTTCAGAATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR GCA 90 bp ATTGCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTAAAGCAGGCTTCCATCTaGTGTGTTACCAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: IAAMQHHNQKSSCGGKGLKQASI*CVTRGF
Trigger: GAAGCCCCTGGTAACACAGCAGATGGAAGCCTGCTT...TAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp CAGGAGTATGTCATCAAAGATGACTCATCTTTTCTGTGTATGAATGAAGATGTGTCTTCCCCAGCCCGGTaGGCAGGCACACCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: QEYVIKDDSSFLCMNEDVSSPAR*AGTPGC
Trigger: ACACCCTGGTGTGCCTGCCCACCGGGCTGGGGAAGA...CACATCTTCATTCATACACAGAAAAGATGAGTCATCTTTGATGACATACTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp GCCATCCTTTCACCACTGGGTGGGTCTACCTGGGAATCAGCTTCGGCAGGAGACAATTCCCACAATATTTaGGGATGGGTTTTTCCTAAA +
Preference number: 4 (lower is better)
Translates to: AILSPLGGSTWESASAGDNSHNI*GWVFPK
Trigger: TTTAGGAAAAACCCATCCCCAAATATTGTGGGAATT...GTCTCCTGCCGAAGCTGATTCCCAGGTAGACCCACCCAGTGGTGAAAGGATGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp TTGCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACTTGGGATTGGTGATATaGCTCTACCCAGTGGACCTG +
Preference number: 4 (lower is better)
Translates to: LLRCNTITKSQAVEERAYLGLVI*LYPVDL
Trigger: CAGGTCCACTGGGTAGAGCCATATCACCAATCCCAA...GTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR TCA 90 bp CTGAAGTCCCCAGCACTGTATTGTCTTAGGTTTCTATTGCTGCGATGCAACACCGTCATTTCAGCCATGTaGGACTGTGGAATACCCATC +
Preference number: 4 (lower is better)
Translates to: LKSPALYCLRFLLLRCNTVISAM*DCGIPI
Trigger: GATGGGTATTCCACAGTCTCACATGGCTGAAATGAC...GGTGTTGCATCGCAGCAATAGAAACCTAAGACAATACAGTGCTGGGGACTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp TTATTTGTGTGGTGGCCAGACAGTTTTCCGATGAACATGGAGCTCACCAACTTTAGTCCTCATTTCGGCTaGGCTCATTTCTTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: LFVWWPDSFPMNMELTNFSPHFG*AHFLPV
Trigger: CACGGGCAAGAAATGAGCTCAGCCGAAATGAGGACT...AAAGTTGGTGAGCTCCATGTTCATCGGAAAACTGTCTGGCCACCACACAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR GCA 90 bp CTGAAGTCCCCAGCACTGTATTGTCTTAGGTTTCTATTGCTGCGATGCAACACCAACTGTCTCACCACCTaGAGTTGTTCCTTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: LKSPALYCLRFLLLRCNTNCLTT*SCSFWV
Trigger: TACCCAGAAGGAACAACTGCAGGTGGTGAGACAGTT...GGTGTTGCATCGCAGCAATAGAAACCTAAGACAATACAGTGCTGGGGACTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR GCA 90 bp ATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACTTGGCTTATATTTCCAGATCCTGCCTTGCCGTTTaGGGCCAGTTCTACCCATGC +
Preference number: 4 (lower is better)
Translates to: ITKSQAVEERAYLAYISRSCLAV*GQFYPC
Trigger: GCATGGGTAGAACTGGCCGCAAACGGCAAGGCAGGA...TCTGGAAATATAAGCCAAGTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR GCA 90 bp GCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACTTCTGGCCTTTTCTTCCTaGTCTACAGGGTTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: AAMQHHNQKSSCGGKGLLLAFSS*STGFFP
Trigger: AGGGAAAAACCCTGTAGAGCAGGAAGAAAAGGCCAG...AAGTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR GCA 90 bp GGCTTATATTTCCAGACTATAGTCTCTTCTTTGGAGGAAGCGAGGACAGGAACTTGTCTTGAGCATGTGTaGTCCTGTCTTGGAGCTCGC +
Preference number: 4 (lower is better)
Translates to: GLYFQTIVSSLEEARTGTCLEHV*SCLGAR
Trigger: GCGAGCTCCAAGACAGGAGCACACATGCTCAAGACA...AGTTCCTGTCCTCGCTTCCTCCAAAGAAGAGACTATAGTCTGGAAATATAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR GCA 90 bp TTGCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACCAGTCTTGGGTTCAATaGCATTTTGAAGCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LLRCNTITKSQAVEERAYQSWVQ*HFEALS
Trigger: GGACAGGGCTTCAAAATGGCATTGAACCCAAGACTG...GTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR CCA 90 bp CAGGAGTATGTCATCAAAGATGACTCATCTTTTCTGTGTATGAATGAAGATGTGCTCGGGCCCCACGTCTaGAAGAGCGTTCTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: QEYVIKDDSSFLCMNEDVLGPHV*KSVLCR
Trigger: ACGGCAGAGAACGCTCTTCCAGACGTGGGGCCCGAG...CACATCTTCATTCATACACAGAAAAGATGAGTCATCTTTGATGACATACTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp GCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACTTAGCCATGTGAGACTGTaGAATACCCATCACGTGGAA +
Preference number: 4 (lower is better)
Translates to: AAMQHHNQKSSCGGKGLLSHVRL*NTHHVE
Trigger: TTCCACGTGATGGGTATTCCACAGTCTCACATGGCT...AAGTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp AAGAAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGATCTTTATTTCCTCTCTaGAAAGCCGAAGCATCGCTG +
Preference number: 4 (lower is better)
Translates to: KKAETLDPLKLPDGVAAGSLFPL*KAEASL
Trigger: CAGCGATGCTTCGGCTTTCCAGAGAGGAAATAAAGA...TCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp AAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGACATGCACCACAGACGATTTaGTCTTCAGGTTCAGAATCA +
Preference number: 4 (lower is better)
Translates to: KAETLDPLKLPDGVAAGHAPQTI*SSGSES
Trigger: TGATTCTGAACCTGAAGACCAAATCGTCTGTGGTGC...ATGTCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR TCA 90 bp AAGAAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGATGGATATACGTCTTTTaGATGGCTCCTAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: KKAETLDPLKLPDGVAAGWIYVF*MAPSSS
Trigger: GGAAGAACTAGGAGCCATTCAAAAGACGTATATCCA...TCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp AGGATGAAGTATGTCTGCTGGGACTGGAGAAAGTATGAAGACGGGGAAAGTCTCAACGCTATCTCGGAATaGCGAGAAGATCATGACTCT +
Preference number: 4 (lower is better)
Translates to: RMKYVCWDWRKYEDGESLNAISE*REDHDS
Trigger: AGAGTCATGATCTTCTCGTCATTCCGAGATAGCGTT...GAGACTTTCCCCGTCTTCATACTTTCTCCAGTCCCAGCAGACATACTTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp TTGCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACATGGTGGCAACGATCTaGATGGTCAACTTGATGTGT +
Preference number: 4 (lower is better)
Translates to: LLRCNTITKSQAVEERAYMVATI*MVNLMC
Trigger: ACACATCAAGTTGACCATTCAGATCGTTGCCACCAT...GTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR TCA 90 bp CAGGAGTATGTCATCAAAGATGACTCATCTTTTCTGTGTATGAATGAAGATGTGACAGCGGTGTGCTCCTaGCTCTCTGCTTCACTGGCG +
Preference number: 4 (lower is better)
Translates to: QEYVIKDDSSFLCMNEDVTAVCS*LSASLA
Trigger: CGCCAGTGAAGCAGAGAGTCAGGAGCACACCGCTGT...CACATCTTCATTCATACACAGAAAAGATGAGTCATCTTTGATGACATACTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR TCA 90 bp ATGAATTCTGAAGTTTCTGTCAGATGTAGGATGAAGTATGTCTGCTGGGACTGGCTGCGGAGCCTTTTCTaGTGTTCCTGTTACGACCCT +
Preference number: 4 (lower is better)
Translates to: MNSEVSVRCRMKYVCWDWLRSLF*CSCYDP
Trigger: AGGGTCGTAACAGGAACATCAGAAAAGGCTCCGCAG...CCAGTCCCAGCAGACATACTTCATCCTACATCTGACAGAAACTTCAGAATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR TCA 90 bp AAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGACATTTGCTCAGGAATCTGTaGGAAAATGTTCATGTTGGG +
Preference number: 4 (lower is better)
Translates to: KAETLDPLKLPDGVAAGHLLRNL*ENVHVG
Trigger: CCCAACATGAACATTTTCTCACAGATTCCTGAGCAA...ATGTCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR TCA 90 bp TTGCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACCTTAACATTTCAGACTaGGACCTCCTTACTACGACC +
Preference number: 4 (lower is better)
Translates to: LLRCNTITKSQAVEERAYLNISD*DLLTTT
Trigger: GGTCGTAGTAAGGAGGTCTCAGTCTGAAATGTTAAG...GTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR GCA 90 bp TTCTATGCTCTTTTGAGACAGGATCTTGTTAAGGCCAAGGCTAGCCTTATAGCAGAAGCCCTGTCCACCTaGTTTCTCCTTGGTAGAGTC +
Preference number: 4 (lower is better)
Translates to: FYALLRQDLVKAKASLIAEALST*FLLGRV
Trigger: GACTCTACCAAGGAGAAAGCAGGTGGACAGGGCTTC...TGCTATAAGGCTAGCCTTGGCCTTAACAAGATCCTGTCTCAAAAGAGCATAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR CCA 90 bp AAGCATGTATCAGGTTTTTGTCTTTCCTGGTTAAGATCATTTGGTAACATTTGCCTCGGGCCCCACGTCTaGAAGAGCGTTCTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: KHVSGFCLSWLRSFGNICLGPHV*KSVLCR
Trigger: ACGGCAGAGAACGCTCTTCCAGACGTGGGGCCCGAG...GCAAATGTTACCAAATGATCTTAACCAGGAAAGACAAAAACCTGATACATGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp GTATTCCAGGAGTATGTCATCAAAGATGACTCATCTTTTCTGTGTATGAATGAACGCGCACGGGGCAATTaGTGGGGTAGATCCACAGGG +
Preference number: 4 (lower is better)
Translates to: VFQEYVIKDDSSFLCMNERARGN*WGRSTG
Trigger: CCCTGTGGATCTACCCCACCAATTGCCCCGTGCGCG...TTCATTCATACACAGAAAAGATGAGTCATCTTTGATGACATACTCCTGGAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp ATTGCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACTTGATATCACTACCTaGCGTGGCACTAAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: IAAMQHHNQKSSCGGKGLLDITT*RGTKSQ
Trigger: TTGGCTCTTAGTGCCACGCCAGGTAGTGATATCAAG...TAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp GCATTATTTGTGTGGTGGCCAGACAGTTTTCCGATGAACATGGAGCTCACCAACCTTCTCCAACACAGGTaGAAACCAGTGTGTTATAGC +
Preference number: 4 (lower is better)
Translates to: ALFVWWPDSFPMNMELTNLLQHR*KPVCYS
Trigger: GCTATAACACACTGGTTTCCACCTGTGTTGGAGAAG...GTTGGTGAGCTCCATGTTCATCGGAAAACTGTCTGGCCACCACACAAATAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR CAA 72 bp ATGGAGCTCACCAACTTTGCCATCCTGATACAGCGTTaGCAAACTCCTGATAGCCTCCATTTTCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: MELTNFAILIQR*QTPDSLHFLKS
Trigger: GGACTTCAGAAAATGGAGGCTATCAGGAGTTTGCAAACGCTGTATCAGGATGGCAAAGTTGGTGAGCTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp AAGAAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGATTCCTGTTAACAGCTTaGGTTGAACCTGTCATTTCA +
Preference number: 4 (lower is better)
Translates to: KKAETLDPLKLPDGVAAGFLLTA*VEPVIS
Trigger: TGAAATGACAGGTTCAACTCAAGCTGTTAACAGGAA...TCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp CTGAAGTCCCCAGCACTGTATTGTCTTAGGTTTCTATTGCTGCGATGCAACACCAGGAGCGTGATATTTTaGGCAGACATCTTCCATTTG +
Preference number: 4 (lower is better)
Translates to: LKSPALYCLRFLLLRCNTRSVIF*ADIFHL
Trigger: CAAATGGAAGATGTCTGCTCAAAATATCACGCTCCT...GGTGTTGCATCGCAGCAATAGAAACCTAAGACAATACAGTGCTGGGGACTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR TCA 90 bp ATGAATTCTGAAGTTTCTGTCAGATGTAGGATGAAGTATGTCTGCTGGGACTGGGGTTATCCTCTTCAGTaGCAGCACCCAAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: MNSEVSVRCRMKYVCWDWGYPLQ*QHPRWR
Trigger: TCTCCATCTTGGGTGCTGTCACTGAAGAGGATAACC...CCAGTCCCAGCAGACATACTTCATCCTACATCTGACAGAAACTTCAGAATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR TCA 90 bp GGCTTATATTTCCAGACTATAGTCTCTTCTTTGGAGGAAGCGAGGACAGGAACTATCACACATATCCTTTaGAACATGCTCTGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: GLYFQTIVSSLEEARTGTITHIL*NMLCRR
Trigger: GCGCCTGCAGAGCATGTTTCAAAGGATATGTGTGAT...AGTTCCTGTCCTCGCTTCCTCCAAAGAAGAGACTATAGTCTGGAAATATAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR GCA 90 bp CATGGGCCGACAATTATAAAACTGCTCAGCAGCTCGATCGGTGAACAGCTCTTCTTAGTGATCACCTGTTaGACAGCCTTGATATCACTA +
Preference number: 4 (lower is better)
Translates to: HGPTIIKLLSSSIGEQLFLVITC*TALISL
Trigger: TAGTGATATCAAGGCTGTGCAACAGGTGATCACTAA...GAAGAGCTGTTCACCGATCGAGCTGCTGAGCAGTTTTATAATTGTCGGCCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR GCA 90 bp AGGATGAAGTATGTCTGCTGGGACTGGAGAAAGTATGAAGACGGGGAAAGTCTCCTAATAACTGGCCGGTaGTGTAAAAGCATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: RMKYVCWDWRKYEDGESLLITGR*CKSISA
Trigger: TGCAGAAATGCTTTTACAGCACCGGCCAGTTATTAG...GAGACTTTCCCCGTCTTCATACTTTCTCCAGTCCCAGCAGACATACTTCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR GCA 90 bp ATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACTTGGCTTATATTTCCAGAATATTCCTTGTTCTGTaGCCAAGGCGACCACTGCGC +
Preference number: 4 (lower is better)
Translates to: ITKSQAVEERAYLAYISRIFLVL*PRRPLR
Trigger: GCGCAGTGGTCGCCTTGGGCACAGAACAAGGAATAT...TCTGGAAATATAAGCCAAGTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR GCA 90 bp TTCTATGCTCTTTTGAGACAGGATCTTGTTAAGGCCAAGGCTAGCCTTATAGCACCGGTTCTTTTGGGCTaGGGAGCCTTTTCTGATGTT +
Preference number: 4 (lower is better)
Translates to: FYALLRQDLVKAKASLIAPVLLG*GAFSDV
Trigger: AACATCAGAAAAGGCTCCGCAGCCCAAAAGAACCGG...TGCTATAAGGCTAGCCTTGGCCTTAACAAGATCCTGTCTCAAAAGAGCATAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR CCA 90 bp GTATTCCAGGAGTATGTCATCAAAGATGACTCATCTTTTCTGTGTATGAATGAAGCACGGGGCAATTGGTaGGGTAGATCCACAGGGCTC +
Preference number: 4 (lower is better)
Translates to: VFQEYVIKDDSSFLCMNEARGNW*GRSTGL
Trigger: GAGCCCTGTGGATCTACCCCACCAATTGCCCCGTGC...TTCATTCATACACAGAAAAGATGAGTCATCTTTGATGACATACTCCTGGAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp GCATTATTTGTGTGGTGGCCAGACAGTTTTCCGATGAACATGGAGCTCACCAACCGGATTGGGCTCTTCTaGGCATCAAAGCATATTATA +
Preference number: 4 (lower is better)
Translates to: ALFVWWPDSFPMNMELTNRIGLF*ASKHII
Trigger: TATAATATGCTTTGATGCCCAGAAGAGCCCAATCCG...GTTGGTGAGCTCCATGTTCATCGGAAAACTGTCTGGCCACCACACAAATAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp AAGAAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGAGTGAATTCTAGTAGTTaGGTCTTGAATCACTCTGTC +
Preference number: 4 (lower is better)
Translates to: KKAETLDPLKLPDGVAAGVNSSS*VLNHSV
Trigger: GACAGAGTGATTCAAGACCCAACTACTAGAATTCAC...TCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR CCA 90 bp ATGAATTCTGAAGTTTCTGTCAGATGTAGGATGAAGTATGTCTGCTGGGACTGGCTGTGCTCACAGGTCTaGCCTTTTCTTCCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: MNSEVSVRCRMKYVCWDWLCSQV*PFLPAL
Trigger: TAGAGCAGGAAGAAAAGGCCAGACCTGTGAGCACAG...CCAGTCCCAGCAGACATACTTCATCCTACATCTGACAGAAACTTCAGAATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR TCA 90 bp AGATGTAGGATGAAGTATGTCTGCTGGGACTGGAGAAAGTATGAAGACGGGGAAGTTAACAGCTTGAGTTaGACCTGTCATTTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: RCRMKYVCWDWRKYEDGEVNSLS*TCHFSH
Trigger: ATGGCTGAAATGACAGGTTCAACTCAAGCTGTTAAC...TTCCCCGTCTTCATACTTTCTCCAGTCCCAGCAGACATACTTCATCCTACATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp AAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGACATCACATGATTTATTTGTaGCCTGACACTCCATTTGTA +
Preference number: 4 (lower is better)
Translates to: KAETLDPLKLPDGVAAGHHMIYL*PDTPFV
Trigger: TACAAATGGAGTGTCAGGTCACAAATAAATCATGTG...ATGTCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR TCA 90 bp ATGAATTCTGAAGTTTCTGTCAGATGTAGGATGAAGTATGTCTGCTGGGACTGGTCAGAAACCTTATTATaGGTGGTGCCAGGGAGACAG +
Preference number: 4 (lower is better)
Translates to: MNSEVSVRCRMKYVCWDWSETLL*VVPGRQ
Trigger: CTGTCTCCCTGGCACCACTCATAATAAGGTTTCTGA...CCAGTCCCAGCAGACATACTTCATCCTACATCTGACAGAAACTTCAGAATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR GCA 90 bp ATGAATTCTGAAGTTTCTGTCAGATGTAGGATGAAGTATGTCTGCTGGGACTGGAACTGTCTCACCACCTaGAGTTGTTCCTTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: MNSEVSVRCRMKYVCWDWNCLTT*SCSFWV
Trigger: TACCCAGAAGGAACAACTGCAGGTGGTGAGACAGTT...CCAGTCCCAGCAGACATACTTCATCCTACATCTGACAGAAACTTCAGAATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR GCA 90 bp TTCTATGCTCTTTTGAGACAGGATCTTGTTAAGGCCAAGGCTAGCCTTATAGCAATCTCCTTATCAGAATaGCTTCCAGACACATCGGCC +
Preference number: 4 (lower is better)
Translates to: FYALLRQDLVKAKASLIAISLSE*LPDTSA
Trigger: GGCCGATGTGTCTGGAAGGCATTCTGATAAGGAGAT...TGCTATAAGGCTAGCCTTGGCCTTAACAAGATCCTGTCTCAAAAGAGCATAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR CCA 90 bp ATGAATTCTGAAGTTTCTGTCAGATGTAGGATGAAGTATGTCTGCTGGGACTGGAGCCATGTGAGACTGTaGAATACCCATCACGTGGAA +
Preference number: 4 (lower is better)
Translates to: MNSEVSVRCRMKYVCWDWSHVRL*NTHHVE
Trigger: TTCCACGTGATGGGTATTCCACAGTCTCACATGGCT...CCAGTCCCAGCAGACATACTTCATCCTACATCTGACAGAAACTTCAGAATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp TTCTATGCTCTTTTGAGACAGGATCTTGTTAAGGCCAAGGCTAGCCTTATAGCACTTGATATCACTACCTaGCGTGGCACTAAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: FYALLRQDLVKAKASLIALDITT*RGTKSQ
Trigger: TTGGCTCTTAGTGCCACGCCAGGTAGTGATATCAAG...TGCTATAAGGCTAGCCTTGGCCTTAACAAGATCCTGTCTCAAAAGAGCATAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp GTCTCTTCTACAGAAAATCCTAGATGGCCCAGTCTTGGGTTCAATGCCATTTTGTCTTTATTTCCTCTCTaGAAAGCCGAAGCATCGCTG +
Preference number: 4 (lower is better)
Translates to: VSSTENPRWPSLGFNAILSLFPL*KAEASL
Trigger: CAGCGATGCTTCGGCTTTCCAGAGAGGAAATAAAGA...CAAAATGGCATTGAACCCAAGACTGGGCCATCTAGGATTTTCTGTAGAAGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp AAGAAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGATGCAGTTGTTCCTTCTaGGTAAAACCTTTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: KKAETLDPLKLPDGVAAGCSCSF*VKPFVF
Trigger: AAACACAAAAGGTTTTACCCAGAAGGAACAACTGCA...TCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp GGAGCCTTTTCTGATGTTCCTGTTACGACCCTTGAAGTGTTCCAATCTTGGACACGGATTGGGCTCTTCTaGGCATCAAAGCATATTATA +
Preference number: 4 (lower is better)
Translates to: GAFSDVPVTTLEVFQSWTRIGLF*ASKHII
Trigger: TATAATATGCTTTGATGCCCAGAAGAGCCCAATCCG...TGTCCAAGATTGGAACACTTCAAGGGTCGTAACAGGAACATCAGAAAAGGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp GCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACTTAAACCTTATTATGAGTaGTGCCAGGGAGACAGTATT +
Preference number: 4 (lower is better)
Translates to: AAMQHHNQKSSCGGKGLLKPYYE*CQGDSI
Trigger: AATACTGTCTCCCTGGCACCACTCATAATAAGGTTT...AAGTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR CCA 90 bp GGCTTATATTTCCAGACTATAGTCTCTTCTTTGGAGGAAGCGAGGACAGGAACTCCTGATCGCTGCTCTTaGTCTCTTCTACAGAAAATC +
Preference number: 4 (lower is better)
Translates to: GLYFQTIVSSLEEARTGTPDRCS*SLLQKI
Trigger: GATTTTCTGTAGAAGAGACCAAGAGCAGCGATCAGG...AGTTCCTGTCCTCGCTTCCTCCAAAGAAGAGACTATAGTCTGGAAATATAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR CCA 90 bp TTGCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACGAAGTGTTCCAATCTTaGACACGTTCTGCCAAAATT +
Preference number: 4 (lower is better)
Translates to: LLRCNTITKSQAVEERAYEVFQS*TRSAKI
Trigger: AATTTTGGCAGAACGTGTCCAAGATTGGAACACTTC...GTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
3UTR CAA 72 bp CTGAAGTCCCCAGCACTGTATTGTCTTAGGTTTCTATaGCTGCGATGCAACACCATAACCAAAAGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: LKSPALYCLRFL*LRCNTITKSQA
Trigger: AGCTTGACTTTTGGTTATGGTGTTGCATCGCAGCAATAGAAACCTAAGACAATACAGTGCTGGGGACTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR CAA 72 bp ACGATCTTGCCAGAGACTCCATTCAGAGAGAGAGAGTaGGTGAATTCTAGTAGTTGGGTCTTGAATCACTCT +
Preference number: 4 (lower is better)
Translates to: TILPETPFRERE*VNSSSWVLNHS
Trigger: AGAGTGATTCAAGACCCAACTACTAGAATTCACCAACTCTCTCTCTCTGAATGGAGTCTCTGGCAAGATCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
3UTR CAA 72 bp TCATCTTGCTCAGGAATCTGTGAGAAAATGTTCATGTaGGGACGCTTCTCACGGACCATTCTGTACTTAGTG +
Preference number: 4 (lower is better)
Translates to: SSCSGICEKMFM*GRFSRTILYLV
Trigger: CACTAAGTACAGAATGGTCCGTGAGAAGCGTCCCAACATGAACATTTTCTCACAGATTCCTGAGCAAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp GTATTCCAGGAGTATGTCATCAAAGATGACTCATCTTTTCTGTGTATGAATGAAGCTTCGTGGGTGCCATaGAAACCACCTTGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: VFQEYVIKDDSSFLCMNEASWVP*KPPCQK
Trigger: CTTCTGGCAAGGTGGTTTTCATGGCACCCACGAAGC...TTCATTCATACACAGAAAAGATGAGTCATCTTTGATGACATACTCCTGGAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp TTATTTGTGTGGTGGCCAGACAGTTTTCCGATGAACATGGAGCTCACCAACTTTAGTGAGTGGTGTATTTaGCCAATTCTCTTACCACCT +
Preference number: 4 (lower is better)
Translates to: LFVWWPDSFPMNMELTNFSEWCI*PILLPP
Trigger: AGGTGGTAAGAGAATTGGTCAAATACACCACTCACT...AAAGTTGGTGAGCTCCATGTTCATCGGAAAACTGTCTGGCCACCACACAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp AAACTGCTCAGCAGCTCGATCGGTGAACAGCTCTTCTTCCAATGGAAGAAACAATCAATTATGCCTTGCTaGATTCCCACAATATTTGGG +
Preference number: 4 (lower is better)
Translates to: KLLSSSIGEQLFFQWKKQSIMPC*IPTIFG
Trigger: CCCAAATATTGTGGGAATTCAGCAAGGCATAATTGA...TTGTTTCTTCCATTGGAAGAAGAGCTGTTCACCGATCGAGCTGCTGAGCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp TTGCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACTCAAATTCACAACCCTaGGTAACATCATATACCAAG +
Preference number: 4 (lower is better)
Translates to: LLRCNTITKSQAVEERAYSNSQP*VTSYTK
Trigger: CTTGGTATATGATGTTACTCAGGGTTGTGAATTTGA...GTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR TCA 90 bp TTATTTGTGTGGTGGCCAGACAGTTTTCCGATGAACATGGAGCTCACCAACTTTTTTCATCTTCATCAGTaGACAATACTGGGGGTTCAC +
Preference number: 4 (lower is better)
Translates to: LFVWWPDSFPMNMELTNFFHLHQ*TILGVH
Trigger: GTGAACCCCCAGTATTGTTCACTGATGAAGATGAAA...AAAGTTGGTGAGCTCCATGTTCATCGGAAAACTGTCTGGCCACCACACAAATAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR GCA 90 bp CAGGAGTATGTCATCAAAGATGACTCATCTTTTCTGTGTATGAATGAAGATGTGAAGCAGGCTTCCATCTaGTGTGTTACCAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: QEYVIKDDSSFLCMNEDVKQASI*CVTRGF
Trigger: GAAGCCCCTGGTAACACAGCAGATGGAAGCCTGCTT...CACATCTTCATTCATACACAGAAAAGATGAGTCATCTTTGATGACATACTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR GCA 90 bp GTCTCTTCTACAGAAAATCCTAGATGGCCCAGTCTTGGGTTCAATGCCATTTTGCTAATAACTGGCCGGTaGTGTAAAAGCATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: VSSTENPRWPSLGFNAILLITGR*CKSISA
Trigger: TGCAGAAATGCTTTTACAGCACCGGCCAGTTATTAG...CAAAATGGCATTGAACCCAAGACTGGGCCATCTAGGATTTTCTGTAGAAGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR GCA 90 bp CAGGAGTATGTCATCAAAGATGACTCATCTTTTCTGTGTATGAATGAAGATGTGACGACAATCCTGCCTTaGCGTTTGCGGCCAGTTCTA +
Preference number: 4 (lower is better)
Translates to: QEYVIKDDSSFLCMNEDVTTILP*RLRPVL
Trigger: TAGAACTGGCCGCAAACGGCAAGGCAGGATTGTCGT...CACATCTTCATTCATACACAGAAAAGATGAGTCATCTTTGATGACATACTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp CTGAAGTCCCCAGCACTGTATTGTCTTAGGTTTCTATTGCTGCGATGCAACACCTTTTTACAGCATGAATaGGTGAGTCAACTTCGTTGT +
Preference number: 4 (lower is better)
Translates to: LKSPALYCLRFLLLRCNTFLQHE*VSQLRC
Trigger: ACAACGAAGTTGACTCACCCATTCATGCTGTAAAAA...GGTGTTGCATCGCAGCAATAGAAACCTAAGACAATACAGTGCTGGGGACTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
3UTR CAA 72 bp CCTTCAACTGAACTGGATGGTTCCCATATTCTTTCCTaGATTCAACACCAGTACATGGTGGTGAAGCAGATT +
Preference number: 4 (lower is better)
Translates to: PSTELDGSHILS*IQHQYMVVKQI
Trigger: AATCTGCTTCACCACCATGTACTGGTGTTGAATCAAGGAAAGAATATGGGAACCATCCAGTTCAGTTGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp GGCTTATATTTCCAGACTATAGTCTCTTCTTTGGAGGAAGCGAGGACAGGAACTTCAATTATGCCTTGCTaGATTCCCACAATATTTGGG +
Preference number: 4 (lower is better)
Translates to: GLYFQTIVSSLEEARTGTSIMPC*IPTIFG
Trigger: CCCAAATATTGTGGGAATTCAGCAAGGCATAATTGA...AGTTCCTGTCCTCGCTTCCTCCAAAGAAGAGACTATAGTCTGGAAATATAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp ATGAATTCTGAAGTTTCTGTCAGATGTAGGATGAAGTATGTCTGCTGGGACTGGTTTTGTGTTTTTCCCTaGAGCATGGCCAACAAAGGT +
Preference number: 4 (lower is better)
Translates to: MNSEVSVRCRMKYVCWDWFCVFP*SMANKG
Trigger: ACCTTTGTTGGCCATGCTTCAGGGAAAAACACAAAA...CCAGTCCCAGCAGACATACTTCATCCTACATCTGACAGAAACTTCAGAATTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp GTATTCCAGGAGTATGTCATCAAAGATGACTCATCTTTTCTGTGTATGAATGAATCCTCCACCCCTTCCTaGCATTTCCAACTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: VFQEYVIKDDSSFLCMNESSTPS*HFQLLA
Trigger: TGCCAAGAGTTGGAAATGTCAGGAAGGGGTGGAGGA...TTCATTCATACACAGAAAAGATGAGTCATCTTTGATGACATACTCCTGGAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR TCA 90 bp GGCTTATATTTCCAGACTATAGTCTCTTCTTTGGAGGAAGCGAGGACAGGAACTGTGGTGAAGCAGATTTaGTTTTATTATGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GLYFQTIVSSLEEARTGTVVKQI*FYYGSE
Trigger: CTCAGAGCCATAATAAAATCAAATCTGCTTCACCAC...AGTTCCTGTCCTCGCTTCCTCCAAAGAAGAGACTATAGTCTGGAAATATAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR GCA 90 bp GGCTTATATTTCCAGACTATAGTCTCTTCTTTGGAGGAAGCGAGGACAGGAACTTTAGTGATCACCTGTTaGACAGCCTTGATATCACTA +
Preference number: 4 (lower is better)
Translates to: GLYFQTIVSSLEEARTGTLVITC*TALISL
Trigger: TAGTGATATCAAGGCTGTGCAACAGGTGATCACTAA...AGTTCCTGTCCTCGCTTCCTCCAAAGAAGAGACTATAGTCTGGAAATATAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR GCA 90 bp CAGGAGTATGTCATCAAAGATGACTCATCTTTTCTGTGTATGAATGAAGATGTGCGTCAAGGAGCCTCCTaGATCTACACTCGGTCTAAA +
Preference number: 4 (lower is better)
Translates to: QEYVIKDDSSFLCMNEDVRQGAS*IYTRSK
Trigger: TTTAGACCGAGTGTAGATGCAGGAGGCTCCTTGACG...CACATCTTCATTCATACACAGAAAAGATGAGTCATCTTTGATGACATACTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR GCA 90 bp TTGCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACGTTATTTTCAAGGTCTaGTTGTATTTGAGCACAACT +
Preference number: 4 (lower is better)
Translates to: LLRCNTITKSQAVEERAYVIFKV*LYLSTT
Trigger: AGTTGTGCTCAAATACAAGCAGACCTTGAAAATAAC...GTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR GCA 90 bp CCAAGTGTTAAGCATGTATCAGGTTTTTGTCTTTCCTGGTTAAGATCATTTGGTTGCAGGCGCTGCATCTaGTCGATGAACTTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: PSVKHVSGFCLSWLRSFGCRRCI*SMNLFL
Trigger: CAAGAACAAGTTCATCGAGCAGATGCAGCGCCTGCA...ACCAAATGATCTTAACCAGGAAAGACAAAAACCTGATACATGCTTAACACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000221175.2
CDS-3UTR CCA 90 bp AGTGTTAAGCATGTATCAGGTTTTTGTCTTTCCTGGTTAAGATCATTTGGTAACACAAGACACTTTACGTaGGTGGCAGGAACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SVKHVSGFCLSWLRSFGNTRHFT*VAGTAP
Trigger: AGGGGCTGTTCCTGCCACCCACGTAAAGTGTCTTGT...GTTACCAAATGATCTTAACCAGGAAAGACAAAAACCTGATACATGCTTAACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp TTGCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACCACAATATTTGGGGATaGGTTTTTCCTAAATTGATC +
Preference number: 4 (lower is better)
Translates to: LLRCNTITKSQAVEERAYHNIWG*VFPKLI
Trigger: GATCAATTTAGGAAAAACCCATCCCCAAATATTGTG...GTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp GTATTCCAGGAGTATGTCATCAAAGATGACTCATCTTTTCTGTGTATGAATGAAGGTTCAATGCCATTTTaGAGCCCTGTCCACCTGCTT +
Preference number: 4 (lower is better)
Translates to: VFQEYVIKDDSSFLCMNEGSMPF*SPVHLL
Trigger: AAGCAGGTGGACAGGGCTTCAAAATGGCATTGAACC...TTCATTCATACACAGAAAAGATGAGTCATCTTTGATGACATACTCCTGGAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR TCA 90 bp GTATTCCAGGAGTATGTCATCAAAGATGACTCATCTTTTCTGTGTATGAATGAACTTCTTGTCCAGAGCTaGAAAGGATTCGGATTCCGG +
Preference number: 4 (lower is better)
Translates to: VFQEYVIKDDSSFLCMNELLVQS*KGFGFR
Trigger: CCGGAATCCGAATCCTTTTCAGCTCTGGACAAGAAG...TTCATTCATACACAGAAAAGATGAGTCATCTTTGATGACATACTCCTGGAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR GCA 90 bp ATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACTTGGCTTATATTTCCAGAACTCCCCTTCAATTATaGCTTGCTGAATTCCCACAA +
Preference number: 4 (lower is better)
Translates to: ITKSQAVEERAYLAYISRTPLQL*LAEFPQ
Trigger: TTGTGGGAATTCAGCAAGGCATAATTGAAGGGGAGT...TCTGGAAATATAAGCCAAGTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR GCA 90 bp AGTGTTAAGCATGTATCAGGTTTTTGTCTTTCCTGGTTAAGATCATTTGGTAACGCCCTGTTTCCTTCTTaGAGATGTCTAGGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: SVKHVSGFCLSWLRSFGNALFPS*RCLGAV
Trigger: TACAGCCCCTAGACATCTGCAAGAAGGAAACAGGGC...GTTACCAAATGATCTTAACCAGGAAAGACAAAAACCTGATACATGCTTAACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000221175.2
CDS-3UTR CCA 90 bp GGCTTATATTTCCAGACTATAGTCTCTTCTTTGGAGGAAGCGAGGACAGGAACTTGCAGTTGTTCCTTCTaGGTAAAACCTTTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: GLYFQTIVSSLEEARTGTCSCSF*VKPFVF
Trigger: AAACACAAAAGGTTTTACCCAGAAGGAACAACTGCA...AGTTCCTGTCCTCGCTTCCTCCAAAGAAGAGACTATAGTCTGGAAATATAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp CCAAGTGTTAAGCATGTATCAGGTTTTTGTCTTTCCTGGTTAAGATCATTTGGTACTCCGAGCCTTCTCTaGTTCATAGACACCATGTGT +
Preference number: 4 (lower is better)
Translates to: PSVKHVSGFCLSWLRSFGTPSLL*FIDTMC
Trigger: ACACATGGTGTCTATGAACCAGAGAAGGCTCGGAGT...ACCAAATGATCTTAACCAGGAAAGACAAAAACCTGATACATGCTTAACACTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp CAGGAGTATGTCATCAAAGATGACTCATCTTTTCTGTGTATGAATGAAGATGTGAACGCTATCTCGGAATaGCGAGAAGATCATGACTCT +
Preference number: 4 (lower is better)
Translates to: QEYVIKDDSSFLCMNEDVNAISE*REDHDS
Trigger: AGAGTCATGATCTTCTCGTCATTCCGAGATAGCGTT...CACATCTTCATTCATACACAGAAAAGATGAGTCATCTTTGATGACATACTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp AGTGTTAAGCATGTATCAGGTTTTTGTCTTTCCTGGTTAAGATCATTTGGTAACATCACACATATCCTTTaGAACATGCTCTGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: SVKHVSGFCLSWLRSFGNITHIL*NMLCRR
Trigger: GCGCCTGCAGAGCATGTTTCAAAGGATATGTGTGAT...GTTACCAAATGATCTTAACCAGGAAAGACAAAAACCTGATACATGCTTAACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000221175.2
CDS-3UTR GCA 90 bp ATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACTTGGCTTATATTTCCAGACCTTATTATGAGTGGTaGCAGGGAGACAGTATTTTT +
Preference number: 4 (lower is better)
Translates to: ITKSQAVEERAYLAYISRPYYEW*QGDSIF
Trigger: AAAAATACTGTCTCCCTGGCACCACTCATAATAAGG...TCTGGAAATATAAGCCAAGTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR GCA 90 bp TTCTATGCTCTTTTGAGACAGGATCTTGTTAAGGCCAAGGCTAGCCTTATAGCACACTTGATTGGCTTTTaGAAGACTCTTCTTCATCAA +
Preference number: 4 (lower is better)
Translates to: FYALLRQDLVKAKASLIAHLIGF*KTLLHQ
Trigger: TTGATGAAGAAGAGTCTTGCAAAAGCCAATCAAGTG...TGCTATAAGGCTAGCCTTGGCCTTAACAAGATCCTGTCTCAAAAGAGCATAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR CCA 90 bp GGCTTATATTTCCAGACTATAGTCTCTTCTTTGGAGGAAGCGAGGACAGGAACTCACAATATTTGGGGATaGGTTTTTCCTAAATTGATC +
Preference number: 4 (lower is better)
Translates to: GLYFQTIVSSLEEARTGTHNIWG*VFPKLI
Trigger: GATCAATTTAGGAAAAACCCATCCCCAAATATTGTG...AGTTCCTGTCCTCGCTTCCTCCAAAGAAGAGACTATAGTCTGGAAATATAAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp GTATTCCAGGAGTATGTCATCAAAGATGACTCATCTTTTCTGTGTATGAATGAAACTCCGAGCCTTCTCTaGTTCATAGACACCATGTGT +
Preference number: 4 (lower is better)
Translates to: VFQEYVIKDDSSFLCMNETPSLL*FIDTMC
Trigger: ACACATGGTGTCTATGAACCAGAGAAGGCTCGGAGT...TTCATTCATACACAGAAAAGATGAGTCATCTTTGATGACATACTCCTGGAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
3UTR CAA 72 bp CCTGCTCTACAGGGTTTTTCCCTTAGAGAAGTAATCTaGGTCCATTTAGAATCCCTTTGTTTAACAGTGTCA +
Preference number: 4 (lower is better)
Translates to: PALQGFSLREVI*VHLESLCLTVS
Trigger: TGACACTGTTAAACAAAGGGATTCTAAATGGACCAAGATTACTTCTCTAAGGGAAAAACCCTGTAGAGCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp GTATTCCAGGAGTATGTCATCAAAGATGACTCATCTTTTCTGTGTATGAATGAAGAGGCATTTCACTTGTaGGAGTTTTACCTGACACAC +
Preference number: 4 (lower is better)
Translates to: VFQEYVIKDDSSFLCMNEEAFHL*EFYLTH
Trigger: GTGTGTCAGGTAAAACTCTCACAAGTGAAATGCCTC...TTCATTCATACACAGAAAAGATGAGTCATCTTTGATGACATACTCCTGGAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR TCA 90 bp ATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACTTGGCTTATATTTCCAGATCTTGTTCATTTGTTTaGTCTTTACTGCATACCGAG +
Preference number: 4 (lower is better)
Translates to: ITKSQAVEERAYLAYISRSCSFV*SLLHTE
Trigger: CTCGGTATGCAGTAAAGATCAAACAAATGAACAAGA...TCTGGAAATATAAGCCAAGTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR TCA 90 bp ATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACTTGGCTTATATTTCCAGAACCAGTACATGGTGGTaGAGCAGATTTGATTTTATT +
Preference number: 4 (lower is better)
Translates to: ITKSQAVEERAYLAYISRTSTWW*SRFDFI
Trigger: AATAAAATCAAATCTGCTTCACCACCATGTACTGGT...TCTGGAAATATAAGCCAAGTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR TCA 90 bp AAGCATGTATCAGGTTTTTGTCTTTCCTGGTTAAGATCATTTGGTAACATTTGCCTTAACATTTCAGACTaGGACCTCCTTACTACGACC +
Preference number: 4 (lower is better)
Translates to: KHVSGFCLSWLRSFGNICLNISD*DLLTTT
Trigger: GGTCGTAGTAAGGAGGTCTCAGTCTGAAATGTTAAG...GCAAATGTTACCAAATGATCTTAACCAGGAAAGACAAAAACCTGATACATGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000221175.2
CDS-3UTR GCA 90 bp ACTCCAAGTGTTAAGCATGTATCAGGTTTTTGTCTTTCCTGGTTAAGATCATTTATATCCTTTGAAACATaGTCTGCAGGCGCTGCATCT +
Preference number: 4 (lower is better)
Translates to: TPSVKHVSGFCLSWLRSFISFET*SAGAAS
Trigger: AGATGCAGCGCCTGCAGAGCATGTTTCAAAGGATAT...AAATGATCTTAACCAGGAAAGACAAAAACCTGATACATGCTTAACACTTGGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000221175.2
CDS-3UTR CCA 90 bp ATGAATTCTGAAGTTTCTGTCAGATGTAGGATGAAGTATGTCTGCTGGGACTGGAATTCCCACAATATTTaGGGATGGGTTTTTCCTAAA +
Preference number: 4 (lower is better)
Translates to: MNSEVSVRCRMKYVCWDWNSHNI*GWVFPK
Trigger: TTTAGGAAAAACCCATCCCCAAATATTGTGGGAATT...CCAGTCCCAGCAGACATACTTCATCCTACATCTGACAGAAACTTCAGAATTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp CATGTATCAGGTTTTTGTCTTTCCTGGTTAAGATCATTTGGTAACATTTGCATGCTTCTCCAACACAGGTaGAAACCAGTGTGTTATAGC +
Preference number: 4 (lower is better)
Translates to: HVSGFCLSWLRSFGNICMLLQHR*KPVCYS
Trigger: GCTATAACACACTGGTTTCCACCTGTGTTGGAGAAG...CATGCAAATGTTACCAAATGATCTTAACCAGGAAAGACAAAAACCTGATACATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR CCA 90 bp CAGGAGTATGTCATCAAAGATGACTCATCTTTTCTGTGTATGAATGAAGATGTGGGTTCACTATCATCATaGCTGTTCTTGTCAACGAAG +
Preference number: 4 (lower is better)
Translates to: QEYVIKDDSSFLCMNEDVGSLSS*LFLSTK
Trigger: CTTCGTTGACAAGAACAGCCATGATGATAGTGAACC...CACATCTTCATTCATACACAGAAAAGATGAGTCATCTTTGATGACATACTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
3UTR CAA 72 bp AACAATACTGGGGGTTCACTATCATCATGGCTGTTCTaGTCAACGAAGTTATTTTCAAGGTCTGCTTGTATT +
Preference number: 4 (lower is better)
Translates to: NNTGGSLSSWLF*STKLFSRSACI
Trigger: AATACAAGCAGACCTTGAAAATAACTTCGTTGACAAGAACAGCCATGATGATAGTGAACCCCCAGTATTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp GTATTCCAGGAGTATGTCATCAAAGATGACTCATCTTTTCTGTGTATGAATGAATCTACTTGTAACCCATaGACTGTTCTTAGCGAAGAG +
Preference number: 4 (lower is better)
Translates to: VFQEYVIKDDSSFLCMNESTCNP*TVLSEE
Trigger: CTCTTCGCTAAGAACAGTTCATGGGTTACAAGTAGA...TTCATTCATACACAGAAAAGATGAGTCATCTTTGATGACATACTCCTGGAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR TCA 90 bp CATGTATCAGGTTTTTGTCTTTCCTGGTTAAGATCATTTGGTAACATTTGCATGTCTACTTGTAACCCATaGACTGTTCTTAGCGAAGAG +
Preference number: 4 (lower is better)
Translates to: HVSGFCLSWLRSFGNICMSTCNP*TVLSEE
Trigger: CTCTTCGCTAAGAACAGTTCATGGGTTACAAGTAGA...CATGCAAATGTTACCAAATGATCTTAACCAGGAAAGACAAAAACCTGATACATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000221175.2
CDS-3UTR TCA 90 bp CATGTATCAGGTTTTTGTCTTTCCTGGTTAAGATCATTTGGTAACATTTGCATGTTCCTGTTAACAGCTTaGGTTGAACCTGTCATTTCA +
Preference number: 4 (lower is better)
Translates to: HVSGFCLSWLRSFGNICMFLLTA*VEPVIS
Trigger: TGAAATGACAGGTTCAACTCAAGCTGTTAACAGGAA...CATGCAAATGTTACCAAATGATCTTAACCAGGAAAGACAAAAACCTGATACATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR TCA 90 bp TGGTCTTCAGGTTCAGAATCATCATCTAACAACAGTTCATCAGAAATTAAGAAGAAGAAAGAAATACAATaGCCGCATTCCCATTTGCTG +
Preference number: 4 (lower is better)
Translates to: WSSGSESSSNNSSSEIKKKKEIQ*PHSHLL
Trigger: CAGCAAATGGGAATGCGGTCATTGTATTTCTTTCTT...CTTCTTAATTTCTGATGAACTGTTGTTAGATGATGATTCTGAACCTGAAGACCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS CCA 90 bp GCGCGCTCCGGGAGATGTCCAGCTGGTAGTCGCGCACGGGGCAATTaGTGGGGTAGATCCACAGGGCTCCCGCAGCCGCGCAGAAGCCGC +
Preference number: 5 (lower is better)
Translates to: ARSGRCPAGSRARGN*WGRSTGLPQPRRSR
Trigger: GCGGCTTCTGCGCGGCTGCGGGAGCCCTGTGGATCTACCCCACCAATTGCCCCGTGCGCGACTACCAGCTGGACATCTCCCGGAGCGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS CCA 90 bp CGCTCCGGGAGATGTCCAGCTGGTAGTCGCGCACGGGGCAATTGGTaGGGTAGATCCACAGGGCTCCCGCAGCCGCGCAGAAGCCGCCAT +
Preference number: 5 (lower is better)
Translates to: RSGRCPAGSRARGNW*GRSTGLPQPRRSRH
Trigger: ATGGCGGCTTCTGCGCGGCTGCGGGAGCCCTGTGGATCTACCCCACCAATTGCCCCGTGCGCGACTACCAGCTGGACATCTCCCGGAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS GCA 90 bp GTACGCTCTTCCCGTCCTTCAGCGAGGATAACGACAATCCTGCCTTaGCGTTTGCGGCCAGTTCTACCCATGCGCTGGATGAGGCGGATT +
Preference number: 5 (lower is better)
Translates to: VRSSRPSARITTILP*RLRPVLPMRWMRRI
Trigger: AATCCGCCTCATCCAGCGCATGGGTAGAACTGGCCGCAAACGGCAAGGCAGGATTGTCGTTATCCTCGCTGAAGGACGGGAAGAGCGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CAA 90 bp GAACTCAAGCAGGGCTTGCACTTAGAGGCAGGAGCTGATGCAGAGGCCATGGAGGCCATGAAAACCACCTaGCCAGAAGGGAACCAGCGG +
Preference number: 5 (lower is better)
Translates to: ELKQGLHLEAGADAEAMEAMKTT*PEGNQR
Trigger: CCGCTGGTTCCCTTCTGGCAAGGTGGTTTTCATGGC...CTCCATGGCCTCTGCATCAGCTCCTGCCTCTAAGTGCAAGCCCTGCTTGAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS TCA 90 bp GCCGAAGCATCGCTGGTGCTGGCTGGTGCAAACGCGCTCTGCAGGTaGGTGTACAGCTTCATGAAGTCCTCATTTCGGCTGAGCTCATTT +
Preference number: 5 (lower is better)
Translates to: AEASLVLAGANALCR*VYSFMKSSFRLSSF
Trigger: AAATGAGCTCAGCCGAAATGAGGACTTCATGAAGCTGTACACTCACCTGCAGAGCGCGTTTGCACCAGCCAGCACCAGCGATGCTTCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS GCA 90 bp GTGGAAGCAGGCTTCCATCTGCTGTGTTACCAGGGGCTTCGTGGGTaGCATGAAAACCACCTTGCCAGAAGGGAACCAGCGGTAGAAATT +
Preference number: 5 (lower is better)
Translates to: VEAGFHLLCYQGLRG*HENHLARREPAVEI
Trigger: AATTTCTACCGCTGGTTCCCTTCTGGCAAGGTGGTTTTCATGGCACCCACGAAGCCCCTGGTAACACAGCAGATGGAAGCCTGCTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CAA 90 bp GAACTCAAGCAGGGCTTGCACTTAGAGGCAGGAGCTGATGCAGAGGCCATGGAGGTAGAGTCTAGTGTCTaGAGCATGTGTGCTCCTGTC +
Preference number: 5 (lower is better)
Translates to: ELKQGLHLEAGADAEAMEVESSV*SMCAPV
Trigger: GACAGGAGCACACATGCTCAAGACACTAGACTCTAC...CTCCATGGCCTCTGCATCAGCTCCTGCCTCTAAGTGCAAGCCCTGCTTGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR CAA 90 bp GAACTCAAGCAGGGCTTGCACTTAGAGGCAGGAGCTGATGCAGAGGCCATGGAGCCACCTGCTTTCTCCTaGGTAGAGTCTAGTGTCTTG +
Preference number: 5 (lower is better)
Translates to: ELKQGLHLEAGADAEAMEPPAFS*VESSVL
Trigger: CAAGACACTAGACTCTACCAAGGAGAAAGCAGGTGG...CTCCATGGCCTCTGCATCAGCTCCTGCCTCTAAGTGCAAGCCCTGCTTGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS GCA 90 bp TGGGTGGCAGGAACAGCCCCTCTAGTAAGGTCATTTACCATGACCTaGGGTGTCAGGAAAAGAACCCTCCTGCTGGACCATATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: WVAGTAPLVRSFTMT*GVRKRTLLLDHISF
Trigger: GAAGGAGATATGGTCCAGCAGGAGGGTTCTTTTCCTGACACCGCAGGTCATGGTAAATGACCTTACTAGAGGGGCTGTTCCTGCCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS GCA 90 bp TTTATTTCCTCTCTGGAAAGCCGAAGCATCGCTGGTGCTGGCTGGTaGAAACGCGCTCTGCAGGTGAGTGTACAGCTTCATGAAGTCCTC +
Preference number: 5 (lower is better)
Translates to: FISSLESRSIAGAGW*KRALQVSVQLHEVL
Trigger: GAGGACTTCATGAAGCTGTACACTCACCTGCAGAGCGCGTTTGCACCAGCCAGCACCAGCGATGCTTCGGCTTTCCAGAGAGGAAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS CCA 90 bp CTCTTTATTTCCTCTCTGGAAAGCCGAAGCATCGCTGGTGCTGGCTaGTGCAAACGCGCTCTGCAGGTGAGTGTACAGCTTCATGAAGTC +
Preference number: 5 (lower is better)
Translates to: LFISSLESRSIAGAG*CKRALQVSVQLHEV
Trigger: GACTTCATGAAGCTGTACACTCACCTGCAGAGCGCGTTTGCACCAGCCAGCACCAGCGATGCTTCGGCTTTCCAGAGAGGAAATAAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS CCA 90 bp TTGCCGTTTGCGGCCAGTTCTACCCATGCGCTGGATGAGGCGGATTaGGCTCTTCTGGGCATCAAAGCATATTATAAGATCCACTTCCCC +
Preference number: 5 (lower is better)
Translates to: LPFAASSTHALDEAD*ALLGIKAYYKIHFP
Trigger: GGGGAAGTGGATCTTATAATATGCTTTGATGCCCAGAAGAGCCCAATCCGCCTCATCCAGCGCATGGGTAGAACTGGCCGCAAACGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS CCA 90 bp ACGACAATCCTGCCTTGCCGTTTGCGGCCAGTTCTACCCATGCGCTaGATGAGGCGGATTGGGCTCTTCTGGGCATCAAAGCATATTATA +
Preference number: 5 (lower is better)
Translates to: TTILPCRLRPVLPMR*MRRIGLFWASKHII
Trigger: TATAATATGCTTTGATGCCCAGAAGAGCCCAATCCGCCTCATCCAGCGCATGGGTAGAACTGGCCGCAAACGGCAAGGCAGGATTGTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CAA 90 bp AAGAAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGAATCCTGCCTTGCCGTTaGCGGCCAGTTCTACCCATG +
Preference number: 5 (lower is better)
Translates to: KKAETLDPLKLPDGVAAGILPCR*RPVLPM
Trigger: CATGGGTAGAACTGGCCGCAAACGGCAAGGCAGGAT...TCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS TCA 90 bp AGCAGGCTTCCATCTGCTGTGTTACCAGGGGCTTCGTGGGTGCCATaGAAACCACCTTGCCAGAAGGGAACCAGCGGTAGAAATTATACA +
Preference number: 5 (lower is better)
Translates to: SRLPSAVLPGASWVP*KPPCQKGTSGRNYT
Trigger: TGTATAATTTCTACCGCTGGTTCCCTTCTGGCAAGGTGGTTTTCATGGCACCCACGAAGCCCCTGGTAACACAGCAGATGGAAGCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CAA 90 bp TTGCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACGCCATGAAAACCACCTaGCCAGAAGGGAACCAGCGG +
Preference number: 5 (lower is better)
Translates to: LLRCNTITKSQAVEERAYAMKTT*PEGNQR
Trigger: CCGCTGGTTCCCTTCTGGCAAGGTGGTTTTCATGGC...GTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CAA 90 bp AAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGACATAACGACAATCCTGCCTaGCCGTTTGCGGCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: KAETLDPLKLPDGVAAGHNDNPA*PFAASS
Trigger: AGAACTGGCCGCAAACGGCAAGGCAGGATTGTCGTT...ATGTCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CAA 90 bp GAACTCAAGCAGGGCTTGCACTTAGAGGCAGGAGCTGATGCAGAGGCCATGGAGATCTGCAGTTTCTTCTaGTCCAGAGCTGAAAAGGAT +
Preference number: 5 (lower is better)
Translates to: ELKQGLHLEAGADAEAMEICSFF*SRAEKD
Trigger: ATCCTTTTCAGCTCTGGACAAGAAGAAACTGCAGAT...CTCCATGGCCTCTGCATCAGCTCCTGCCTCTAAGTGCAAGCCCTGCTTGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS CCA 90 bp CGGCCAGTTCTACCCATGCGCTGGATGAGGCGGATTGGGCTCTTCTaGGCATCAAAGCATATTATAAGATCCACTTCCCCTATATCCAAA +
Preference number: 5 (lower is better)
Translates to: RPVLPMRWMRRIGLF*ASKHIIRSTSPISK
Trigger: TTTGGATATAGGGGAAGTGGATCTTATAATATGCTTTGATGCCCAGAAGAGCCCAATCCGCCTCATCCAGCGCATGGGTAGAACTGGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CAA 90 bp GGAGCCTTTTCTGATGTTCCTGTTACGACCCTTGAAGTGTTCCAATCTTGGACAAACGACAATCCTGCCTaGCCGTTTGCGGCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: GAFSDVPVTTLEVFQSWTNDNPA*PFAASS
Trigger: AGAACTGGCCGCAAACGGCAAGGCAGGATTGTCGTT...TGTCCAAGATTGGAACACTTCAAGGGTCGTAACAGGAACATCAGAAAAGGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR CAA 90 bp AGGATGAAGTATGTCTGCTGGGACTGGAGAAAGTATGAAGACGGGGAAAGTCTCTCTCACCACCTGCAGTaGTTCCTTCTGGGTAAAACC +
Preference number: 5 (lower is better)
Translates to: RMKYVCWDWRKYEDGESLSHHLQ*FLLGKT
Trigger: GGTTTTACCCAGAAGGAACAACTGCAGGTGGTGAGA...GAGACTTTCCCCGTCTTCATACTTTCTCCAGTCCCAGCAGACATACTTCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CAA 90 bp AGATGTAGGATGAAGTATGTCTGCTGGGACTGGAGAAAGTATGAAGACGGGGAAAGGAAGCGGACGATCTaGCCAGAGACTCCATTCAGA +
Preference number: 5 (lower is better)
Translates to: RCRMKYVCWDWRKYEDGERKRTI*PETPFR
Trigger: TCTGAATGGAGTCTCTGGCAAGATCGTCCGCTTCCT...TTCCCCGTCTTCATACTTTCTCCAGTCCCAGCAGACATACTTCATCCTACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR CAA 90 bp GAACTCAAGCAGGGCTTGCACTTAGAGGCAGGAGCTGATGCAGAGGCCATGGAGATTTTCAAGGTCTGCTaGTATTTGAGCACAACTGTT +
Preference number: 5 (lower is better)
Translates to: ELKQGLHLEAGADAEAMEIFKVC*YLSTTV
Trigger: AACAGTTGTGCTCAAATACAAGCAGACCTTGAAAAT...CTCCATGGCCTCTGCATCAGCTCCTGCCTCTAAGTGCAAGCCCTGCTTGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS GCA 90 bp TTTGACCAATTCTCTTACCACCTGGCAGTAAGCATAGTTCCCAAGTaGCTTATGAGCTTCATCCACCACAAGACACTTTACGTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: FDQFSYHLAVSIVPK*LMSFIHHKTLYVGG
Trigger: GCCACCCACGTAAAGTGTCTTGTGGTGGATGAAGCTCATAAGGCACTTGGGAACTATGCTTACTGCCAGGTGGTAAGAGAATTGGTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS CCA 90 bp TCAACGCTATCTCGGAATGACGAGAAGATCATGACTCTGCTCTCGTaGCACTTCTTCTCAGTGGTGGCTTTAGCATTCCATGACTTGAAG +
Preference number: 5 (lower is better)
Translates to: STLSRNDEKIMTLLS*HFFSVVALAFHDLK
Trigger: CTTCAAGTCATGGAATGCTAAAGCCACCACTGAGAAGAAGTGCCACGAGAGCAGAGTCATGATCTTCTCGTCATTCCGAGATAGCGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000058889.5
ENSMUST00000221937.2
ENSMUST00000222540.2
CDS-3UTR CAA 90 bp CTGAAGTCCCCAGCACTGTATTGTCTTAGGTTTCTATTGCTGCGATGCAACACCTCTAGTAGTTGGGTCTaGAATCACTCTGTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: LKSPALYCLRFLLLRCNTSSSWV*NHSVLL
Trigger: CAGGAGGACAGAGTGATTCAAGACCCAACTACTAGA...GGTGTTGCATCGCAGCAATAGAAACCTAAGACAATACAGTGCTGGGGACTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS TCA 90 bp GAAGTTGAAATAATAGTTGGGAAGAGGTTTAAAGTAACCACCCCTTaGGGAAAACGGCCTTCGCTGTACACTCCGAGCCTTCTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: EVEIIVGKRFKVTTP*GKRPSLYTPSLLWF
Trigger: GAACCAGAGAAGGCTCGGAGTGTACAGCGAAGGCCGTTTTCCTCAAGGGGTGGTTACTTTAAACCTCTTCCCAACTATTATTTCAACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR CAA 90 bp AAGAAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGATTCAGAGAGAGAGAGTaGGTGAATTCTAGTAGTTGG +
Preference number: 5 (lower is better)
Translates to: KKAETLDPLKLPDGVAAGFRERE*VNSSSW
Trigger: CCAACTACTAGAATTCACCAACTCTCTCTCTCTGAA...TCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR CAA 90 bp TTCTATGCTCTTTTGAGACAGGATCTTGTTAAGGCCAAGGCTAGCCTTATAGCAATGTGTGCTCCTGTCTaGGAGCTCGCGTGTGACTTA +
Preference number: 5 (lower is better)
Translates to: FYALLRQDLVKAKASLIAMCAPV*ELACDL
Trigger: TAAGTCACACGCGAGCTCCAAGACAGGAGCACACAT...TGCTATAAGGCTAGCCTTGGCCTTAACAAGATCCTGTCTCAAAAGAGCATAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR CAA 90 bp TTGCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACAATCACACATATCCTTaGAAACATGCTCTGCAGGCG +
Preference number: 5 (lower is better)
Translates to: LLRCNTITKSQAVEERAYNHTYP*KHALQA
Trigger: CGCCTGCAGAGCATGTTTCAAAGGATATGTGTGATT...GTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR CAA 90 bp AAGAAGGCAGAGACTTTAGATCCACTGAAGCTACCTGATGGGGTTGCTGCTGGACCCTTCAATTATGCCTaGCTGAATTCCCACAATATT +
Preference number: 5 (lower is better)
Translates to: KKAETLDPLKLPDGVAAGPFNYA*LNSHNI
Trigger: AATATTGTGGGAATTCAGCAAGGCATAATTGAAGGG...TCCAGCAGCAACCCCATCAGGTAGCTTCAGTGGATCTAAAGTCTCTGCCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CAA 90 bp TTATTTGTGTGGTGGCCAGACAGTTTTCCGATGAACATGGAGCTCACCAACTTTAAAGAAGCATATTCCTaGTTCTGTGCCCAAGGCGAC +
Preference number: 5 (lower is better)
Translates to: LFVWWPDSFPMNMELTNFKEAYS*FCAQGD
Trigger: GTCGCCTTGGGCACAGAACAAGGAATATGCTTCTTT...AAAGTTGGTGAGCTCCATGTTCATCGGAAAACTGTCTGGCCACCACACAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR CAA 90 bp AGTGTTAAGCATGTATCAGGTTTTTGTCTTTCCTGGTTAAGATCATTTGGTAACATCCTGCCTTGCCGTTaGCGGCCAGTTCTACCCATG +
Preference number: 5 (lower is better)
Translates to: SVKHVSGFCLSWLRSFGNILPCR*RPVLPM
Trigger: CATGGGTAGAACTGGCCGCAAACGGCAAGGCAGGAT...GTTACCAAATGATCTTAACCAGGAAAGACAAAAACCTGATACATGCTTAACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR CAA 90 bp GCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACTTTCCCATATTCTTTCCTaGATTCAACACCAGTACATG +
Preference number: 5 (lower is better)
Translates to: AAMQHHNQKSSCGGKGLLSHILS*IQHQYM
Trigger: CATGTACTGGTGTTGAATCAAGGAAAGAATATGGGA...AAGTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR CAA 90 bp TTGCTGCGATGCAACACCATAACCAAAAGTCAAGCTGTGGAGGAAAGGGCTTACGCATGTATCAGGTTTTaGTCTTTCCTGGTTAAGATC +
Preference number: 5 (lower is better)
Translates to: LLRCNTITKSQAVEERAYACIRF*SFLVKI
Trigger: GATCTTAACCAGGAAAGACAAAAACCTGATACATGC...GTAAGCCCTTTCCTCCACAGCTTGACTTTTGGTTATGGTGTTGCATCGCAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR CAA 90 bp AGGATGAAGTATGTCTGCTGGGACTGGAGAAAGTATGAAGACGGGGAAAGTCTCTTAGCATTCCATGACTaGAAGTGTTCCAGTATAACT +
Preference number: 5 (lower is better)
Translates to: RMKYVCWDWRKYEDGESLLAFHD*KCSSIT
Trigger: AGTTATACTGGAACACTTCAAGTCATGGAATGCTAA...GAGACTTTCCCCGTCTTCATACTTTCTCCAGTCCCAGCAGACATACTTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CAA 90 bp AGGATGAAGTATGTCTGCTGGGACTGGAGAAAGTATGAAGACGGGGAAAGTCTCCTTAGAGAAGTAATCTaGGTCCATTTAGAATCCCTT +
Preference number: 5 (lower is better)
Translates to: RMKYVCWDWRKYEDGESLLREVI*VHLESL
Trigger: AAGGGATTCTAAATGGACCAAGATTACTTCTCTAAG...GAGACTTTCCCCGTCTTCATACTTTCTCCAGTCCCAGCAGACATACTTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR CAA 90 bp AGATGTAGGATGAAGTATGTCTGCTGGGACTGGAGAAAGTATGAAGACGGGGAATCACTTGATTGGCTTTaGCAAGACTCTTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: RCRMKYVCWDWRKYEDGESLDWL*QDSSSS
Trigger: TGATGAAGAAGAGTCTTGCAAAAGCCAATCAAGTGA...TTCCCCGTCTTCATACTTTCTCCAGTCCCAGCAGACATACTTCATCCTACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058889.5
CDS-3UTR CAA 90 bp CTTGATTGGCTTTTGCAAGACTCTTCTTCATCAACACAAAAACTGTCCTCTAAATCTCACCACCTGCAGTaGTTCCTTCTGGGTAAAACC +
Preference number: 5 (lower is better)
Translates to: LDWLLQDSSSSTQKLSSKSHHLQ*FLLGKT
Trigger: GGTTTTACCCAGAAGGAACAACTGCAGGTGGTGAGA...TTTAGAGGACAGTTTTTGTGTTGATGAAGAAGAGTCTTGCAAAAGCCAATCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000222540.2
CDS-3UTR CAA 90 bp TTCTATGCTCTTTTGAGACAGGATCTTGTTAAGGCCAAGGCTAGCCTTATAGCACCCTTCAATTATGCCTaGCTGAATTCCCACAATATT +
Preference number: 5 (lower is better)
Translates to: FYALLRQDLVKAKASLIAPFNYA*LNSHNI
Trigger: AATATTGTGGGAATTCAGCAAGGCATAATTGAAGGG...TGCTATAAGGCTAGCCTTGGCCTTAACAAGATCCTGTCTCAAAAGAGCATAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS-3UTR CAA 90 bp AAGCATGTATCAGGTTTTTGTCTTTCCTGGTTAAGATCATTTGGTAACATTTGCAATCACACATATCCTTaGAAACATGCTCTGCAGGCG +
Preference number: 5 (lower is better)
Translates to: KHVSGFCLSWLRSFGNICNHTYP*KHALQA
Trigger: CGCCTGCAGAGCATGTTTCAAAGGATATGTGTGATT...GCAAATGTTACCAAATGATCTTAACCAGGAAAGACAAAAACCTGATACATGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000221175.2
CDS GCA 72 bp GCAGCCGCGCAGAAGCCGCCATCCCCGGGATCCAGCTaGCGCTCAGCCTCGTACGCCGCCACCAGCAGCACC +
Preference number: 6 (lower is better)
Translates to: AAAQKPPSPGSS*RSASYAATSST
Trigger: GGTGCTGCTGGTGGCGGCGTACGAGGCTGAGCGGCAGCTGGATCCCGGGGATGGCGGCTTCTGCGCGGCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS CCA 72 bp GGGAGATGTCCAGCTGGTAGTCGCGCACGGGGCAATTaGTGGGGTAGATCCACAGGGCTCCCGCAGCCGCGC +
Preference number: 6 (lower is better)
Translates to: GRCPAGSRARGN*WGRSTGLPQPR
Trigger: GCGCGGCTGCGGGAGCCCTGTGGATCTACCCCACCAATTGCCCCGTGCGCGACTACCAGCTGGACATCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS GCA 72 bp TCTTCCCCAGCCCGGTGGGCAGGCACACCAGGGTGTTaGAGAACAGCGCGCTCCGGGAGATGTCCAGCTGGT +
Preference number: 6 (lower is better)
Translates to: SSPARWAGTPGC*RTARSGRCPAG
Trigger: ACCAGCTGGACATCTCCCGGAGCGCGCTGTTCTGCAACACCCTGGTGTGCCTGCCCACCGGGCTGGGGAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS CCA 72 bp AGATGTCCAGCTGGTAGTCGCGCACGGGGCAATTGGTaGGGTAGATCCACAGGGCTCCCGCAGCCGCGCAGA +
Preference number: 6 (lower is better)
Translates to: RCPAGSRARGNW*GRSTGLPQPRR
Trigger: TCTGCGCGGCTGCGGGAGCCCTGTGGATCTACCCCACCAATTGCCCCGTGCGCGACTACCAGCTGGACATCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS CCA 72 bp CTGCCTTGCCGTTTGCGGCCAGTTCTACCCATGCGCTaGATGAGGCGGATTGGGCTCTTCTGGGCATCAAAG +
Preference number: 6 (lower is better)
Translates to: LPCRLRPVLPMR*MRRIGLFWASK
Trigger: CTTTGATGCCCAGAAGAGCCCAATCCGCCTCATCCAGCGCATGGGTAGAACTGGCCGCAAACGGCAAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS CAA 72 bp CCTTCAGCGAGGATAACGACAATCCTGCCTTGCCGTTaGCGGCCAGTTCTACCCATGCGCTGGATGAGGCGG +
Preference number: 6 (lower is better)
Translates to: PSARITTILPCR*RPVLPMRWMRR
Trigger: CCGCCTCATCCAGCGCATGGGTAGAACTGGCCGCAAACGGCAAGGCAGGATTGTCGTTATCCTCGCTGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS CAA 90 bp TCTTCCCGTCCTTCAGCGAGGATAACGACAATCCTGCCTTGCCGTTaGCGGCCAGTTCTACCCATGCGCTGGATGAGGCGGATTGGGCTC +
Preference number: 6 (lower is better)
Translates to: SSRPSARITTILPCR*RPVLPMRWMRRIGL
Trigger: GAGCCCAATCCGCCTCATCCAGCGCATGGGTAGAACTGGCCGCAAACGGCAAGGCAGGATTGTCGTTATCCTCGCTGAAGGACGGGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS CAA 90 bp TGTACGCTCTTCCCGTCCTTCAGCGAGGATAACGACAATCCTGCCTaGCCGTTTGCGGCCAGTTCTACCCATGCGCTGGATGAGGCGGAT +
Preference number: 6 (lower is better)
Translates to: CTLFPSFSEDNDNPA*PFAASSTHALDEAD
Trigger: ATCCGCCTCATCCAGCGCATGGGTAGAACTGGCCGCAAACGGCAAGGCAGGATTGTCGTTATCCTCGCTGAAGGACGGGAAGAGCGTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS GCA 72 bp TCCCGTCCTTCAGCGAGGATAACGACAATCCTGCCTTaGCGTTTGCGGCCAGTTCTACCCATGCGCTGGATG +
Preference number: 6 (lower is better)
Translates to: SRPSARITTILP*RLRPVLPMRWM
Trigger: CATCCAGCGCATGGGTAGAACTGGCCGCAAACGGCAAGGCAGGATTGTCGTTATCCTCGCTGAAGGACGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS TCA 72 bp CCATCTGCTGTGTTACCAGGGGCTTCGTGGGTGCCATaGAAACCACCTTGCCAGAAGGGAACCAGCGGTAGA +
Preference number: 6 (lower is better)
Translates to: PSAVLPGASWVP*KPPCQKGTSGR
Trigger: TCTACCGCTGGTTCCCTTCTGGCAAGGTGGTTTTCATGGCACCCACGAAGCCCCTGGTAACACAGCAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS TCA 72 bp TCGCTGGTGCTGGCTGGTGCAAACGCGCTCTGCAGGTaGGTGTACAGCTTCATGAAGTCCTCATTTCGGCTG +
Preference number: 6 (lower is better)
Translates to: SLVLAGANALCR*VYSFMKSSFRL
Trigger: CAGCCGAAATGAGGACTTCATGAAGCTGTACACTCACCTGCAGAGCGCGTTTGCACCAGCCAGCACCAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS TCA 72 bp CTTGCCGTTTGCGGCCAGTTCTACCCATGCGCTGGATaGGGCGGATTGGGCTCTTCTGGGCATCAAAGCATA +
Preference number: 6 (lower is better)
Translates to: LAVCGQFYPCAG*GGLGSSGHQSI
Trigger: TATGCTTTGATGCCCAGAAGAGCCCAATCCGCCTCATCCAGCGCATGGGTAGAACTGGCCGCAAACGGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS GCA 72 bp TCTCTGGAAAGCCGAAGCATCGCTGGTGCTGGCTGGTaGAAACGCGCTCTGCAGGTGAGTGTACAGCTTCAT +
Preference number: 6 (lower is better)
Translates to: SLESRSIAGAGW*KRALQVSVQLH
Trigger: ATGAAGCTGTACACTCACCTGCAGAGCGCGTTTGCACCAGCCAGCACCAGCGATGCTTCGGCTTTCCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS CAA 72 bp TTCCCGTCCTTCAGCGAGGATAACGACAATCCTGCCTaGCCGTTTGCGGCCAGTTCTACCCATGCGCTGGAT +
Preference number: 6 (lower is better)
Translates to: FPSFSEDNDNPA*PFAASSTHALD
Trigger: ATCCAGCGCATGGGTAGAACTGGCCGCAAACGGCAAGGCAGGATTGTCGTTATCCTCGCTGAAGGACGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS GCA 72 bp CTTTATTTCCTCTCTGGAAAGCCGAAGCATCGCTGGTaGTGGCTGGTGCAAACGCGCTCTGCAGGTGAGTGT +
Preference number: 6 (lower is better)
Translates to: LYFLSGKPKHRW*WLVQTRSAGEC
Trigger: ACACTCACCTGCAGAGCGCGTTTGCACCAGCCAGCACCAGCGATGCTTCGGCTTTCCAGAGAGGAAATAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS CCA 72 bp TCTCTTTATTTCCTCTCTGGAAAGCCGAAGCATCGCTaGTGCTGGCTGGTGCAAACGCGCTCTGCAGGTGAG +
Preference number: 6 (lower is better)
Translates to: SLYFLSGKPKHR*CWLVQTRSAGE
Trigger: CTCACCTGCAGAGCGCGTTTGCACCAGCCAGCACCAGCGATGCTTCGGCTTTCCAGAGAGGAAATAAAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS GCA 72 bp GGAACAGCCCCTCTAGTAAGGTCATTTACCATGACCTaGGGTGTCAGGAAAAGAACCCTCCTGCTGGACCAT +
Preference number: 6 (lower is better)
Translates to: GTAPLVRSFTMT*GVRKRTLLLDH
Trigger: ATGGTCCAGCAGGAGGGTTCTTTTCCTGACACCGCAGGTCATGGTAAATGACCTTACTAGAGGGGCTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS CCA 72 bp GCGGCCAGTTCTACCCATGCGCTGGATGAGGCGGATTaGGCTCTTCTGGGCATCAAAGCATATTATAAGATC +
Preference number: 6 (lower is better)
Translates to: AASSTHALDEAD*ALLGIKAYYKI
Trigger: GATCTTATAATATGCTTTGATGCCCAGAAGAGCCCAATCCGCCTCATCCAGCGCATGGGTAGAACTGGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS TCA 72 bp TCTCCTCAACGCTATCTCGGAATGACGAGAAGATCATaGCTCTGCTCTCGTGGCACTTCTTCTCAGTGGTGG +
Preference number: 6 (lower is better)
Translates to: SPQRYLGMTRRS*LCSRGTSSQWW
Trigger: CCACCACTGAGAAGAAGTGCCACGAGAGCAGAGTCATGATCTTCTCGTCATTCCGAGATAGCGTTGAGGAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000058889.5
ENSMUST00000221937.2
ENSMUST00000222540.2
CDS CCA 72 bp CTACCCATGCGCTGGATGAGGCGGATTGGGCTCTTCTaGGCATCAAAGCATATTATAAGATCCACTTCCCCT +
Preference number: 6 (lower is better)
Translates to: LPMRWMRRIGLF*ASKHIIRSTSP
Trigger: AGGGGAAGTGGATCTTATAATATGCTTTGATGCCCAGAAGAGCCCAATCCGCCTCATCCAGCGCATGGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS TCA 72 bp CTACCTGGCGTGGCACTAAGAGCCAAGATACGAAAGTaGGTGGTGTATTTGACCAATTCTCTTACCACCTGG +
Preference number: 6 (lower is better)
Translates to: LPGVALRAKIRK*VVYLTNSLTTW
Trigger: CCAGGTGGTAAGAGAATTGGTCAAATACACCACTCACTTTCGTATCTTGGCTCTTAGTGCCACGCCAGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS CCA 72 bp AGTGATCACCTGTTGCACAGCCTTGATATCACTACCTaGCGTGGCACTAAGAGCCAAGATACGAAAGTGAGT +
Preference number: 6 (lower is better)
Translates to: SDHLLHSLDITT*RGTKSQDTKVS
Trigger: ACTCACTTTCGTATCTTGGCTCTTAGTGCCACGCCAGGTAGTGATATCAAGGCTGTGCAACAGGTGATCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS CCA 72 bp TCTCGGAATGACGAGAAGATCATGACTCTGCTCTCGTaGCACTTCTTCTCAGTGGTGGCTTTAGCATTCCAT +
Preference number: 6 (lower is better)
Translates to: SRNDEKIMTLLS*HFFSVVALAFH
Trigger: ATGGAATGCTAAAGCCACCACTGAGAAGAAGTGCCACGAGAGCAGAGTCATGATCTTCTCGTCATTCCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000058889.5
ENSMUST00000221937.2
ENSMUST00000222540.2
CDS CCA 72 bp GGAAAACGGCCTTCGCTGTACACTCCGAGCCTTCTCTaGTTCATAGACACCATGTGTGATATACATTTTGTG +
Preference number: 6 (lower is better)
Translates to: GKRPSLYTPSLL*FIDTMCDIHFV
Trigger: CACAAAATGTATATCACACATGGTGTCTATGAACCAGAGAAGGCTCGGAGTGTACAGCGAAGGCCGTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS GCA 72 bp TTCTCTTACCACCTGGCAGTAAGCATAGTTCCCAAGTaGCTTATGAGCTTCATCCACCACAAGACACTTTAC +
Preference number: 6 (lower is better)
Translates to: FSYHLAVSIVPK*LMSFIHHKTLY
Trigger: GTAAAGTGTCTTGTGGTGGATGAAGCTCATAAGGCACTTGGGAACTATGCTTACTGCCAGGTGGTAAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS GCA 72 bp TCTATCTTCCCAATTAGTAGGTTAGTGATCACCTGTTaGACAGCCTTGATATCACTACCTGGCGTGGCACTA +
Preference number: 6 (lower is better)
Translates to: SIFPISRLVITC*TALISLPGVAL
Trigger: TAGTGCCACGCCAGGTAGTGATATCAAGGCTGTGCAACAGGTGATCACTAACCTACTAATTGGGAAGATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS GCA 72 bp CTTCATGAAGTCCTCATTTCGGCTGAGCTCATTTCTTaGCCGTGTCATTCCTTTAGTTCCATCCATGATTCC +
Preference number: 6 (lower is better)
Translates to: LHEVLISAELIS*PCHSFSSIHDS
Trigger: GGAATCATGGATGGAACTAAAGGAATGACACGGGCAAGAAATGAGCTCAGCCGAAATGAGGACTTCATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS GCA 72 bp TGGCCAACAAAGGTCATCACTCTAATAACTGGCCGGTaGTGTAAAAGCATTTCTGCAATCTCCTCAACGCTA +
Preference number: 6 (lower is better)
Translates to: WPTKVITLITGR*CKSISAISSTL
Trigger: TAGCGTTGAGGAGATTGCAGAAATGCTTTTACAGCACCGGCCAGTTATTAGAGTGATGACCTTTGTTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000058889.5
ENSMUST00000221937.2
ENSMUST00000222540.2
CDS CAA 72 bp ACTAATGCAGAGGGCAAACTCCCCTTCAATTATGCCTaGCTGAATTCCCACAATATTTGGGGATGGGTTTTT +
Preference number: 6 (lower is better)
Translates to: TNAEGKLPFNYA*LNSHNIWGWVF
Trigger: AAAAACCCATCCCCAAATATTGTGGGAATTCAGCAAGGCATAATTGAAGGGGAGTTTGCCCTCTGCATTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS CAA 90 bp CTCTCGTGGCACTTCTTCTCAGTGGTGGCTTTAGCATTCCATGACTaGAAGTGTTCCAGTATAACTTCTTCCAGTTTCTTTAACTTTGGA +
Preference number: 6 (lower is better)
Translates to: LSWHFFSVVALAFHD*KCSSITSSSFFNFG
Trigger: TCCAAAGTTAAAGAAACTGGAAGAAGTTATACTGGAACACTTCAAGTCATGGAATGCTAAAGCCACCACTGAGAAGAAGTGCCACGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000058889.5
ENSMUST00000221937.2
ENSMUST00000222540.2
CDS CCA 72 bp GGATTGATTTTATCAGGAACCATTCGTGGACTTCCTTaGTATAAACGCAGCACTTGTCTGTTACCTGAAATG +
Preference number: 6 (lower is better)
Translates to: GLILSGTIRGLP*YKRSTCLLPEM
Trigger: CATTTCAGGTAACAGACAAGTGCTGCGTTTATACCAAGGAAGTCCACGAATGGTTCCTGATAAAATCAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2
CDS CAA 72 bp CACTTCTTCTCAGTGGTGGCTTTAGCATTCCATGACTaGAAGTGTTCCAGTATAACTTCTTCCAGTTTCTTT +
Preference number: 6 (lower is better)
Translates to: HFFSVVALAFHD*KCSSITSSSFF
Trigger: AAAGAAACTGGAAGAAGTTATACTGGAACACTTCAAGTCATGGAATGCTAAAGCCACCACTGAGAAGAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000058889.5
ENSMUST00000221937.2
ENSMUST00000222540.2
CDS CCA 72 bp AATTATGCCTTGCTGAATTCCCACAATATTTGGGGATaGGTTTTTCCTAAATTGATCTCTTGCCAGAATTAT +
Preference number: 6 (lower is better)
Translates to: NYALLNSHNIWG*VFPKLISCQNY
Trigger: ATAATTCTGGCAAGAGATCAATTTAGGAAAAACCCATCCCCAAATATTGTGGGAATTCAGCAAGGCATAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058889.5
ENSMUST00000222540.2