Pregenerated sensors for FANCL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004018Ensembl transcript IDs: ENSMUST00000004120.9, ENSMUST00000109509.8, ENSMUST00000134445.2, ENSMUST00000136830.2
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCCAAGATCCCTGCCTCGGTACAGACACACGCCCACGGGTAATCTaGGAGTCACAGACTTGGAAAGTTCTCCAAGGTTTTGGCCTGCAA | + |
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Preference number: 1 (lower is better) Translates to: SQDPCLGTDTRPRVI*ESQTWKVLQGFGLQ Trigger: TTGCAGGCCAAAACCTTGGAGAACTTTCCAAGTCTGTGACTCCCAGATTACCCGTGGGCGTGTGTCTGTACCGAGGCAGGGATCTTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| 3UTR GCA 90 bp | AGCTATATGAGTTTCCAAGGTTCATATTGCAAGCCCTATCTGGACTaGACTAGAAGAGATCCCATCAGGAAGCCAAGATCCCTGCCTCGG | + |
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Preference number: 1 (lower is better) Translates to: SYMSFQGSYCKPYLD*TRRDPIRKPRSLPR Trigger: CCGAGGCAGGGATCTTGGCTTCCTGATGGGATCTCTTCTAGTGCAGTCCAGATAGGGCTTGCAATATGAACCTTGGAAACTCATATAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| 3UTR CCA 90 bp | ACGGGTAATCTGGGAGTCACAGACTTGGAAAGTTCTCCAAGGTTTTaGCCTGCAATTTTTCAGTTGACTCTGAGTGAAGAGACAAAGGCA | + |
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Preference number: 1 (lower is better) Translates to: TGNLGVTDLESSPRF*PAIFQLTLSEETKA Trigger: TGCCTTTGTCTCTTCACTCAGAGTCAACTGAAAAATTGCAGGCCAAAACCTTGGAGAACTTTCCAAGTCTGTGACTCCCAGATTACCCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| 3UTR GCA 90 bp | AGTCTTCAACAAACACCCAGCTATATGAGTTTCCAAGGTTCATATTaGAAGCCCTATCTGGACTGCACTAGAAGAGATCCCATCAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: SLQQTPSYMSFQGSY*KPYLDCTRRDPIRK Trigger: CTTCCTGATGGGATCTCTTCTAGTGCAGTCCAGATAGGGCTTGCAATATGAACCTTGGAAACTCATATAGCTGGGTGTTTGTTGAAGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| 3UTR-3UTR GCA 90 bp | TTCAGTGAGATGCAGAGTCTTCAACAAACACCCAGCTATATGAGTTTCCAAGGTAAGCCCTATCTGGACTaGACTAGAAGAGATCCCATC | + |
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Preference number: 2 (lower is better) Translates to: FSEMQSLQQTPSYMSFQGKPYLD*TRRDPI Trigger: GATGGGATCTCTTCTAGTGCAGTCCAGATAGGGCTT...ACCTTGGAAACTCATATAGCTGGGTGTTTGTTGAAGACTCTGCATCTCACTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| 3UTR-3UTR CCA 90 bp | AGTTTCCAAGGTTCATATTGCAAGCCCTATCTGGACTGCACTAGAAGAGATCCCTGGGAGTCACAGACTTaGAAAGTTCTCCAAGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: SFQGSYCKPYLDCTRRDPWESQT*KVLQGF Trigger: AAAACCTTGGAGAACTTTCCAAGTCTGTGACTCCCA...GGGATCTCTTCTAGTGCAGTCCAGATAGGGCTTGCAATATGAACCTTGGAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| 3UTR-3UTR TCA 90 bp | TTCAGTGAGATGCAGAGTCTTCAACAAACACCCAGCTATATGAGTTTCCAAGGTTCAGTTGACTCTGAGTaGAGAGACAAAGGCAGATGT | + |
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Preference number: 2 (lower is better) Translates to: FSEMQSLQQTPSYMSFQGSVDSE*RDKGRC Trigger: ACATCTGCCTTTGTCTCTTCACTCAGAGTCAACTGA...ACCTTGGAAACTCATATAGCTGGGTGTTTGTTGAAGACTCTGCATCTCACTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| 3UTR CAA 90 bp | ACAGACTTGGAAAGTTCTCCAAGGTTTTGGCCTGCAATTTTTCAGTaGACTCTGAGTGAAGAGACAAAGGCAGATGTGTATTACTATGGG | + |
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Preference number: 2 (lower is better) Translates to: TDLESSPRFWPAIFQ*TLSEETKADVYYYG Trigger: CCCATAGTAATACACATCTGCCTTTGTCTCTTCACTCAGAGTCAACTGAAAAATTGCAGGCCAAAACCTTGGAGAACTTTCCAAGTCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| 3UTR CCA 72 bp | CCCTGCCTCGGTACAGACACACGCCCACGGGTAATCTaGGAGTCACAGACTTGGAAAGTTCTCCAAGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: PCLGTDTRPRVI*ESQTWKVLQGF Trigger: AAAACCTTGGAGAACTTTCCAAGTCTGTGACTCCCAGATTACCCGTGGGCGTGTGTCTGTACCGAGGCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| 3UTR CCA 72 bp | GACACACGCCCACGGGTAATCTGGGAGTCACAGACTTaGAAAGTTCTCCAAGGTTTTGGCCTGCAATTTTTC | + |
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Preference number: 3 (lower is better) Translates to: DTRPRVIWESQT*KVLQGFGLQFF Trigger: GAAAAATTGCAGGCCAAAACCTTGGAGAACTTTCCAAGTCTGTGACTCCCAGATTACCCGTGGGCGTGTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| 3UTR GCA 72 bp | AGTTTCCAAGGTTCATATTGCAAGCCCTATCTGGACTaGACTAGAAGAGATCCCATCAGGAAGCCAAGATCC | + |
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Preference number: 3 (lower is better) Translates to: SFQGSYCKPYLD*TRRDPIRKPRS Trigger: GGATCTTGGCTTCCTGATGGGATCTCTTCTAGTGCAGTCCAGATAGGGCTTGCAATATGAACCTTGGAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| 3UTR CCA 72 bp | CTGGGAGTCACAGACTTGGAAAGTTCTCCAAGGTTTTaGCCTGCAATTTTTCAGTTGACTCTGAGTGAAGAG | + |
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Preference number: 3 (lower is better) Translates to: LGVTDLESSPRF*PAIFQLTLSEE Trigger: CTCTTCACTCAGAGTCAACTGAAAAATTGCAGGCCAAAACCTTGGAGAACTTTCCAAGTCTGTGACTCCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| CDS-3UTR CCA 90 bp | GGTAATCTGGGAGTCACAGACTTGGAAAGTTCTCCAAGGTTTTGGCCTGCAATTCCGGGGAGGTTTCTCTaGCTCCAGCACCCAGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: GNLGVTDLESSPRFWPAIPGRFL*LQHPGL Trigger: AAGACCTGGGTGCTGGAGCCAGAGAAACCTCCCCGG...AATTGCAGGCCAAAACCTTGGAGAACTTTCCAAGTCTGTGACTCCCAGATTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| CDS-3UTR GCA 90 bp | TATTGCAAGCCCTATCTGGACTGCACTAGAAGAGATCCCATCAGGAAGCCAAGAAATCCTGCGTGCTGTTaGACTCCGGGGAGGTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: YCKPYLDCTRRDPIRKPRNPACC*TPGRFL Trigger: GAGAAACCTCCCCGGAGTGCAACAGCACGCAGGATT...TCTTGGCTTCCTGATGGGATCTCTTCTAGTGCAGTCCAGATAGGGCTTGCAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| CDS-3UTR TCA 90 bp | TATTGCAAGCCCTATCTGGACTGCACTAGAAGAGATCCCATCAGGAAGCCAAGAGTTTTCTCCCGGTTCTaGGGAAGTAGCAGCGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: YCKPYLDCTRRDPIRKPRVFSRF*GSSSGK Trigger: TTTCCCGCTGCTACTTCCTCAGAACCGGGAGAAAAC...TCTTGGCTTCCTGATGGGATCTCTTCTAGTGCAGTCCAGATAGGGCTTGCAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| CDS-3UTR CCA 90 bp | TCATATTGCAAGCCCTATCTGGACTGCACTAGAAGAGATCCCATCAGGAAGCCAAGTAGCAGCGGGAAATaGCGCAACAGGCTTGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SYCKPYLDCTRRDPIRKPSSSGK*RNRLAS Trigger: AGAAGCAAGCCTGTTGCGCCATTTCCCGCTGCTACT...TGGCTTCCTGATGGGATCTCTTCTAGTGCAGTCCAGATAGGGCTTGCAATATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| CDS-3UTR CCA 90 bp | ACACGCCCACGGGTAATCTGGGAGTCACAGACTTGGAAAGTTCTCCAAGGTTTTTGGGGTCCACCTCGATaGCTATGGAAACATTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: TRPRVIWESQTWKVLQGFWGPPR*LWKHSF Trigger: GAAAGAATGTTTCCATAGCCATCGAGGTGGACCCCA...AAAACCTTGGAGAACTTTCCAAGTCTGTGACTCCCAGATTACCCGTGGGCGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| 3UTR CAA 72 bp | AGACACACGCCCACGGGTAATCTGGGAGTCACAGACTaGGAAAGTTCTCCAAGGTTTTGGCCTGCAATTTTT | + |
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Preference number: 4 (lower is better) Translates to: RHTPTGNLGVTD*ESSPRFWPAIF Trigger: AAAAATTGCAGGCCAAAACCTTGGAGAACTTTCCAAGTCTGTGACTCCCAGATTACCCGTGGGCGTGTGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| CDS-3UTR TCA 90 bp | ACACGCCCACGGGTAATCTGGGAGTCACAGACTTGGAAAGTTCTCCAAGGTTTTTTCCCTGAGCCGAAATaGATCCCTCATACACAGTTT | + |
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Preference number: 4 (lower is better) Translates to: TRPRVIWESQTWKVLQGFFPEPK*IPHTQF Trigger: AAACTGTGTATGAGGGATTCATTTCGGCTCAGGGAA...AAAACCTTGGAGAACTTTCCAAGTCTGTGACTCCCAGATTACCCGTGGGCGTGT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| CDS-3UTR CCA 90 bp | ACACGCCCACGGGTAATCTGGGAGTCACAGACTTGGAAAGTTCTCCAAGGTTTTCACAACACAATCTGGTaGCTCTACAGGATACTTTGC | + |
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Preference number: 4 (lower is better) Translates to: TRPRVIWESQTWKVLQGFHNTIW*LYRILC Trigger: GCAAAGTATCCTGTAGAGCCACCAGATTGTGTTGTG...AAAACCTTGGAGAACTTTCCAAGTCTGTGACTCCCAGATTACCCGTGGGCGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| CDS-3UTR GCA 90 bp | TTCAGTGAGATGCAGAGTCTTCAACAAACACCCAGCTATATGAGTTTCCAAGGTTTCCTAATGCAATCCTaGGTGCTGTTGCACTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: FSEMQSLQQTPSYMSFQGFLMQS*VLLHSG Trigger: CCCGGAGTGCAACAGCACGCAGGATTGCATTAGGAA...ACCTTGGAAACTCATATAGCTGGGTGTTTGTTGAAGACTCTGCATCTCACTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| CDS-3UTR CCA 90 bp | TCATATTGCAAGCCCTATCTGGACTGCACTAGAAGAGATCCCATCAGGAAGCCACCAGGAAACAGAAAATaGGACAGGAAAGTCCACAAC | + |
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Preference number: 4 (lower is better) Translates to: SYCKPYLDCTRRDPIRKPPGNRK*DRKVHN Trigger: GTTGTGGACTTTCCTGTCCCATTTTCTGTTTCCTGG...TGGCTTCCTGATGGGATCTCTTCTAGTGCAGTCCAGATAGGGCTTGCAATATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| CDS-3UTR GCA 90 bp | ACACGCCCACGGGTAATCTGGGAGTCACAGACTTGGAAAGTTCTCCAAGGTTTTATTAGATCAGGAGAGTaGTTCATTCTCTGTTGGACT | + |
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Preference number: 4 (lower is better) Translates to: TRPRVIWESQTWKVLQGFIRSGE*FILCWT Trigger: AGTCCAACAGAGAATGAAGCACTCTCCTGATCTAAT...AAAACCTTGGAGAACTTTCCAAGTCTGTGACTCCCAGATTACCCGTGGGCGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| CDS-3UTR GCA 90 bp | TTCAGTGAGATGCAGAGTCTTCAACAAACACCCAGCTATATGAGTTTCCAAGGTGGTCTTTGCAGAAACTaGAAGAAGGTGGTTGTACAC | + |
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Preference number: 4 (lower is better) Translates to: FSEMQSLQQTPSYMSFQGGLCRN*KKVVVH Trigger: GTGTACAACCACCTTCTTGCAGTTTCTGCAAAGACC...ACCTTGGAAACTCATATAGCTGGGTGTTTGTTGAAGACTCTGCATCTCACTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| CDS-3UTR GCA 90 bp | AGTCTTCAACAAACACCCAGCTATATGAGTTTCCAAGGTTCATATTGCAAGCCCGGAACTCTCCACACATaGGAGTTTATCCCAACCAAT | + |
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Preference number: 4 (lower is better) Translates to: SLQQTPSYMSFQGSYCKPGTLHT*EFIPTN Trigger: ATTGGTTGGGATAAACTCGCATGTGTGGAGAGTTCC...GGGCTTGCAATATGAACCTTGGAAACTCATATAGCTGGGTGTTTGTTGAAGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| CDS-3UTR CCA 90 bp | AGGTTTTCTCCCAGACATTTTCAAGGTAATTGGCTTACTACAATAGGGACAGTCTGGGGTCCACCTCGATaGCTATGGAAACATTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: RFSPRHFQGNWLTTIGTVWGPPR*LWKHSF Trigger: GAAAGAATGTTTCCATAGCCATCGAGGTGGACCCCA...GACTGTCCCTATTGTAGTAAGCCAATTACCTTGAAAATGTCTGGGAGAAAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000134445.2 |
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| CDS-3UTR CCA 90 bp | TTCACAGGTAGGTTCCATTCAAGGTTTTCTCCCAGACATTTTCAAGGTAATTGGCACATGCCATCCAGATaGACTTTGACTGGCTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: FTGRFHSRFSPRHFQGNWHMPSR*TLTGFV Trigger: AACAAAGCCAGTCAAAGTCCATCTGGATGGCATGTG...CCAATTACCTTGAAAATGTCTGGGAGAAAACCTTGAATGGAACCTACCTGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134445.2 |
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| CDS-3UTR CCA 90 bp | TCTTCAACAAACACCCAGCTATATGAGTTTCCAAGGTTCATATTGCAAGCCCTACCACCTCGATGGCTATaGAAACATTCTTTCCTAATG | + |
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Preference number: 4 (lower is better) Translates to: SSTNTQLYEFPRFILQALPPRWL*KHSFLM Trigger: CATTAGGAAAGAATGTTTCCATAGCCATCGAGGTGG...TAGGGCTTGCAATATGAACCTTGGAAACTCATATAGCTGGGTGTTTGTTGAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| CDS-3UTR CCA 90 bp | TTCAGTGAGATGCAGAGTCTTCAACAAACACCCAGCTATATGAGTTTCCAAGGTTACAGACATATTTCATaGAAAGGTTGTCCACACTGG | + |
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Preference number: 4 (lower is better) Translates to: FSEMQSLQQTPSYMSFQGYRHIS*KGCPHW Trigger: CCAGTGTGGACAACCTTTCCATGAAATATGTCTGTA...ACCTTGGAAACTCATATAGCTGGGTGTTTGTTGAAGACTCTGCATCTCACTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| CDS-3UTR CCA 90 bp | CTCTTCACAGGTAGGTTCCATTCAAGGTTTTCTCCCAGACATTTTCAAGGTAATTACAGACATATTTCATaGAAAGGTTGTCCACACTGG | + |
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Preference number: 4 (lower is better) Translates to: LFTGRFHSRFSPRHFQGNYRHIS*KGCPHW Trigger: CCAGTGTGGACAACCTTTCCATGAAATATGTCTGTA...ATTACCTTGAAAATGTCTGGGAGAAAACCTTGAATGGAACCTACCTGTGAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134445.2 |
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| CDS-3UTR GCA 90 bp | ATTTTTCAGTTGACTCTGAGTGAAGAGACAAAGGCAGATGTGTATTACTATGGGGATCCCATAAATGAATaGTACCACTCAGCTTCATTC | + |
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Preference number: 4 (lower is better) Translates to: IFQLTLSEETKADVYYYGDPINE*YHSASF Trigger: GAATGAAGCTGAGTGGTAGCATTCATTTATGGGATC...CCCATAGTAATACACATCTGCCTTTGTCTCTTCACTCAGAGTCAACTGAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| CDS-3UTR GCA 90 bp | TCTTCACAGGTAGGTTCCATTCAAGGTTTTCTCCCAGACATTTTCAAGGTAATTGATCCCATAAATGAATaGTACCACTCAGCTTCATTC | + |
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Preference number: 4 (lower is better) Translates to: SSQVGSIQGFLPDIFKVIDPINE*YHSASF Trigger: GAATGAAGCTGAGTGGTAGCATTCATTTATGGGATC...AATTACCTTGAAAATGTCTGGGAGAAAACCTTGAATGGAACCTACCTGTGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134445.2 |
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| CDS-3UTR TCA 90 bp | GGCAGATGTGTATTACTATGGGATCACTATATTCTGTCTGCTGATATTTGTATTCTCTGTTGGACTACTTaGTGGTACTCATTAAGTATA | + |
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Preference number: 4 (lower is better) Translates to: GRCVLLWDHYILSADICILCWTT*WYSLSI Trigger: TATACTTAATGAGTACCATCAAGTAGTCCAACAGAG...AATACAAATATCAGCAGACAGAATATAGTGATCCCATAGTAATACACATCTGCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| CDS GCA 90 bp | GGTCCACCTCGATGGCTATGGAAACATTCTTTCCTAATGCAATCCTaGGTGCTGTTGCACTCCGGGGAGGTTTCTCTGGCTCCAGCACCC | + |
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Preference number: 5 (lower is better) Translates to: GPPRWLWKHSFLMQS*VLLHSGEVSLAPAP Trigger: GGGTGCTGGAGCCAGAGAAACCTCCCCGGAGTGCAACAGCACGCAGGATTGCATTAGGAAAGAATGTTTCCATAGCCATCGAGGTGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004120.9 ENSMUST00000109509.8 |
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| CDS GCA 90 bp | ACATGGTCAGCTCCAAGAAAGCAAAACTCAGGAAGCATGGTAGGGTaGCTGGGGTCCACCTCGATGGCTATGGAAACATTCTTTCCTAAT | + |
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Preference number: 5 (lower is better) Translates to: TWSAPRKQNSGSMVG*LGSTSMAMETFFPN Trigger: ATTAGGAAAGAATGTTTCCATAGCCATCGAGGTGGACCCCAGGCACCCTACCATGCTTCCTGAGTTTTGCTTTCTTGGAGCTGACCATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004120.9 ENSMUST00000109509.8 |
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| CDS CCA 90 bp | GGAAAGGTTGTCCACACTGGGGATTATTACACACTTGATCAGGAATaGCACCATTCAGGTGACGGGCATAACAGATTCCACAGTCCATGC | + |
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Preference number: 5 (lower is better) Translates to: GKVVHTGDYYTLDQE*HHSGDGHNRFHSPC Trigger: GCATGGACTGTGGAATCTGTTATGCCCGTCACCTGAATGGTGCCATTCCTGATCAAGTGTGTAATAATCCCCAGTGTGGACAACCTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004120.9 ENSMUST00000109509.8 ENSMUST00000134445.2 |
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| CDS-3UTR CAA 90 bp | ACACGCCCACGGGTAATCTGGGAGTCACAGACTTGGAAAGTTCTCCAAGGTTTTTACTTTGCCTTCAACTaGACAGTGATTAGGTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: TRPRVIWESQTWKVLQGFYFAFN*TVIRCF Trigger: GAAGCACCTAATCACTGTCAAGTTGAAGGCAAAGTA...AAAACCTTGGAGAACTTTCCAAGTCTGTGACTCCCAGATTACCCGTGGGCGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| CDS GCA 90 bp | GGTGGCTCTACAGGATACTTTGCCTTCAACTTGACAGTGATTAGGTaGTTCCTACCAGAAGCATCATCTGCTTTTAACTTGATGGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: GGSTGYFAFNLTVIR*FLPEASSAFNLMVL Trigger: CAGCACCATCAAGTTAAAAGCAGATGATGCTTCTGGTAGGAAGCACCTAATCACTGTCAAGTTGAAGGCAAAGTATCCTGTAGAGCCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004120.9 ENSMUST00000109509.8 |
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| CDS CCA 90 bp | ATAAACATCTACCAAGGAGCTCTGTGGTGTCCAGGAAACAGAAAATaGGACAGGAAAGTCCACAACACAATCTGGTGGCTCTACAGGATA | + |
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Preference number: 5 (lower is better) Translates to: INIYQGALWCPGNRK*DRKVHNTIWWLYRI Trigger: TATCCTGTAGAGCCACCAGATTGTGTTGTGGACTTTCCTGTCCCATTTTCTGTTTCCTGGACACCACAGAGCTCCTTGGTAGATGTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004120.9 ENSMUST00000109509.8 |
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| CDS-3UTR CAA 90 bp | TTCAGTGAGATGCAGAGTCTTCAACAAACACCCAGCTATATGAGTTTCCAAGGTTCATTCCCAGGGGTTTaGTCACATGGTCAGCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: FSEMQSLQQTPSYMSFQGSFPGV*SHGQLQ Trigger: TTGGAGCTGACCATGTGACAAAACCCCTGGGAATGA...ACCTTGGAAACTCATATAGCTGGGTGTTTGTTGAAGACTCTGCATCTCACTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| CDS-3UTR CAA 90 bp | TCATATTGCAAGCCCTATCTGGACTGCACTAGAAGAGATCCCATCAGGAAGCCAGGGATTATTACACACTaGATCAGGAATGGCACCATT | + |
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Preference number: 5 (lower is better) Translates to: SYCKPYLDCTRRDPIRKPGIITH*IRNGTI Trigger: AATGGTGCCATTCCTGATCAAGTGTGTAATAATCCC...TGGCTTCCTGATGGGATCTCTTCTAGTGCAGTCCAGATAGGGCTTGCAATATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| CDS CCA 90 bp | TGTAGATCATGTCAGCGGACACATGCCATCCAGATGGACTTTGACTaGCTTTGTTCTCATACAGACATATTTCATGGAAAGGTTGTCCAC | + |
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Preference number: 5 (lower is better) Translates to: CRSCQRTHAIQMDFD*LCSHTDIFHGKVVH Trigger: GTGGACAACCTTTCCATGAAATATGTCTGTATGAGAACAAAGCCAGTCAAAGTCCATCTGGATGGCATGTGTCCGCTGACATGATCTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134445.2 |
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| CDS-3UTR CAA 90 bp | TCTTCAACAAACACCCAGCTATATGAGTTTCCAAGGTTCATATTGCAAGCCCTAAGTAATCTTGCCTTCTaGAGCTGCAGGTCCTTAGGC | + |
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Preference number: 5 (lower is better) Translates to: SSTNTQLYEFPRFILQALSNLAF*SCRSLG Trigger: GCCTAAGGACCTGCAGCTCAAGAAGGCAAGATTACT...TAGGGCTTGCAATATGAACCTTGGAAACTCATATAGCTGGGTGTTTGTTGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| CDS-3UTR CAA 90 bp | TCATATTGCAAGCCCTATCTGGACTGCACTAGAAGAGATCCCATCAGGAAGCCATATTTCATGGAAAGGTaGTCCACACTGGGGATTATT | + |
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Preference number: 5 (lower is better) Translates to: SYCKPYLDCTRRDPIRKPYFMER*STLGII Trigger: AATAATCCCCAGTGTGGACAACCTTTCCATGAAATA...TGGCTTCCTGATGGGATCTCTTCTAGTGCAGTCCAGATAGGGCTTGCAATATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| CDS-3UTR CAA 90 bp | AGACATTTTCAAGGTAATTGGCTTACTACAATAGGGACAGTCACCAAAGAAGACTCATTCCCAGGGGTTTaGTCACATGGTCAGCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: RHFQGNWLTTIGTVTKEDSFPGV*SHGQLQ Trigger: TTGGAGCTGACCATGTGACAAAACCCCTGGGAATGA...GTCTTCTTTGGTGACTGTCCCTATTGTAGTAAGCCAATTACCTTGAAAATGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134445.2 |
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| CDS-3UTR CAA 90 bp | AGACATTTTCAAGGTAATTGGCTTACTACAATAGGGACAGTCACCAAAGAAGACCCATCCAGATGGACTTaGACTGGCTTTGTTCTCATA | + |
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Preference number: 5 (lower is better) Translates to: RHFQGNWLTTIGTVTKEDPSRWT*TGFVLI Trigger: TATGAGAACAAAGCCAGTCAAAGTCCATCTGGATGG...GTCTTCTTTGGTGACTGTCCCTATTGTAGTAAGCCAATTACCTTGAAAATGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134445.2 |
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| CDS-3UTR CAA 90 bp | ATTTTTCAGTTGACTCTGAGTGAAGAGACAAAGGCAGATGTGTATTACTATGGGTCATCTGCTTTTAACTaGATGGTGCTGAAGGAACTC | + |
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Preference number: 5 (lower is better) Translates to: IFQLTLSEETKADVYYYGSSAFN*MVLKEL Trigger: GAGTTCCTTCAGCACCATCAAGTTAAAAGCAGATGA...CCCATAGTAATACACATCTGCCTTTGTCTCTTCACTCAGAGTCAACTGAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004120.9 |
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| CDS-3UTR CAA 90 bp | AGACATTTTCAAGGTAATTGGCTTACTACAATAGGGACAGTCACCAAAGAAGACGGGATTATTACACACTaGATCAGGAATGGCACCATT | + |
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Preference number: 5 (lower is better) Translates to: RHFQGNWLTTIGTVTKEDGIITH*IRNGTI Trigger: AATGGTGCCATTCCTGATCAAGTGTGTAATAATCCC...GTCTTCTTTGGTGACTGTCCCTATTGTAGTAAGCCAATTACCTTGAAAATGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134445.2 |
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| CDS-3UTR CAA 90 bp | TTCACAGGTAGGTTCCATTCAAGGTTTTCTCCCAGACATTTTCAAGGTAATTGGTATTTCATGGAAAGGTaGTCCACACTGGGGATTATT | + |
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Preference number: 5 (lower is better) Translates to: FTGRFHSRFSPRHFQGNWYFMER*STLGII Trigger: AATAATCCCCAGTGTGGACAACCTTTCCATGAAATA...CCAATTACCTTGAAAATGTCTGGGAGAAAACCTTGAATGGAACCTACCTGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000134445.2 |
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| CDS GCA 90 bp | AGGTCTTTGCAGAAACTGCAAGAAGGTGGTTGTACACACAACTCTTaGTTATTCTTTAAAGCAACTTCCAAAATCATCTTCAATTCCATC | + |
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Preference number: 5 (lower is better) Translates to: RSLQKLQEGGCTHNS*LFFKATSKIIFNSI Trigger: GATGGAATTGAAGATGATTTTGGAAGTTGCTTTAAAGAATAAGCAAGAGTTGTGTGTACAACCACCTTCTTGCAGTTTCTGCAAAGACCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004120.9 ENSMUST00000109509.8 |
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| CDS CCA 72 bp | AATCCTGCGTGCTGTTGCACTCCGGGGAGGTTTCTCTaGCTCCAGCACCCAGGTCTTCTCATCAATTTCATC | + |
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Preference number: 6 (lower is better) Translates to: NPACCCTPGRFL*LQHPGLLINFI Trigger: GATGAAATTGATGAGAAGACCTGGGTGCTGGAGCCAGAGAAACCTCCCCGGAGTGCAACAGCACGCAGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004120.9 ENSMUST00000109509.8 |
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| CDS CAA 90 bp | CGATGGCTATGGAAACATTCTTTCCTAATGCAATCCTGCGTGCTGTaGCACTCCGGGGAGGTTTCTCTGGCTCCAGCACCCAGGTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: RWLWKHSFLMQSCVL*HSGEVSLAPAPRSS Trigger: AGAAGACCTGGGTGCTGGAGCCAGAGAAACCTCCCCGGAGTGCAACAGCACGCAGGATTGCATTAGGAAAGAATGTTTCCATAGCCATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004120.9 ENSMUST00000109509.8 |
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| CDS GCA 72 bp | GCTCCAAGAAAGCAAAACTCAGGAAGCATGGTAGGGTaGCTGGGGTCCACCTCGATGGCTATGGAAACATTC | + |
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Preference number: 6 (lower is better) Translates to: APRKQNSGSMVG*LGSTSMAMETF Trigger: GAATGTTTCCATAGCCATCGAGGTGGACCCCAGGCACCCTACCATGCTTCCTGAGTTTTGCTTTCTTGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004120.9 ENSMUST00000109509.8 ENSMUST00000134445.2 |
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| CDS GCA 72 bp | CGATGGCTATGGAAACATTCTTTCCTAATGCAATCCTaGGTGCTGTTGCACTCCGGGGAGGTTTCTCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: RWLWKHSFLMQS*VLLHSGEVSLA Trigger: AGCCAGAGAAACCTCCCCGGAGTGCAACAGCACGCAGGATTGCATTAGGAAAGAATGTTTCCATAGCCATCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004120.9 ENSMUST00000109509.8 |
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| CDS CCA 72 bp | GTCCACACTGGGGATTATTACACACTTGATCAGGAATaGCACCATTCAGGTGACGGGCATAACAGATTCCAC | + |
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Preference number: 6 (lower is better) Translates to: VHTGDYYTLDQE*HHSGDGHNRFH Trigger: GTGGAATCTGTTATGCCCGTCACCTGAATGGTGCCATTCCTGATCAAGTGTGTAATAATCCCCAGTGTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004120.9 ENSMUST00000109509.8 ENSMUST00000134445.2 |
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| CDS CAA 72 bp | TTTTTCAGCTGCAGGCTACACAGTAATCTTGCCTTCTaGAGCTGCAGGTCCTTAGGCAGCACTATTCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: FFSCRLHSNLAF*SCRSLGSTILR Trigger: CCTCAGAATAGTGCTGCCTAAGGACCTGCAGCTCAAGAAGGCAAGATTACTGTGTAGCCTGCAGCTGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004120.9 ENSMUST00000109509.8 ENSMUST00000136830.2 |
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| CDS CAA 72 bp | AGGTGCTTCCTACCAGAAGCATCATCTGCTTTTAACTaGATGGTGCTGAAGGAACTCTCCACACATGCGAGT | + |
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Preference number: 6 (lower is better) Translates to: RCFLPEASSAFN*MVLKELSTHAS Trigger: ACTCGCATGTGTGGAGAGTTCCTTCAGCACCATCAAGTTAAAAGCAGATGATGCTTCTGGTAGGAAGCACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004120.9 ENSMUST00000109509.8 |
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| CDS CAA 72 bp | CAATCTGGTGGCTCTACAGGATACTTTGCCTTCAACTaGACAGTGATTAGGTGCTTCCTACCAGAAGCATCA | + |
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Preference number: 6 (lower is better) Translates to: QSGGSTGYFAFN*TVIRCFLPEAS Trigger: TGATGCTTCTGGTAGGAAGCACCTAATCACTGTCAAGTTGAAGGCAAAGTATCCTGTAGAGCCACCAGATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004120.9 ENSMUST00000109509.8 |
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| CDS CAA 90 bp | GCGAGTTTATCCCAACCAATGGCTCCTATCTCAGTAAGAAGGTCTTaGCAGAAACTGCAAGAAGGTGGTTGTACACACAACTCTTGCTTA | + |
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Preference number: 6 (lower is better) Translates to: ASLSQPMAPISVRRS*QKLQEGGCTHNSCL Trigger: TAAGCAAGAGTTGTGTGTACAACCACCTTCTTGCAGTTTCTGCAAAGACCTTCTTACTGAGATAGGAGCCATTGGTTGGGATAAACTCGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004120.9 ENSMUST00000109509.8 ENSMUST00000136830.2 |
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| CDS CAA 90 bp | ACAGTGATTAGGTGCTTCCTACCAGAAGCATCATCTGCTTTTAACTaGATGGTGCTGAAGGAACTCTCCACACATGCGAGTTTATCCCAA | + |
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Preference number: 6 (lower is better) Translates to: TVIRCFLPEASSAFN*MVLKELSTHASLSQ Trigger: TTGGGATAAACTCGCATGTGTGGAGAGTTCCTTCAGCACCATCAAGTTAAAAGCAGATGATGCTTCTGGTAGGAAGCACCTAATCACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004120.9 ENSMUST00000109509.8 |
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| CDS CAA 90 bp | TCCACAACACAATCTGGTGGCTCTACAGGATACTTTGCCTTCAACTaGACAGTGATTAGGTGCTTCCTACCAGAAGCATCATCTGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: STTQSGGSTGYFAFN*TVIRCFLPEASSAF Trigger: AAAAGCAGATGATGCTTCTGGTAGGAAGCACCTAATCACTGTCAAGTTGAAGGCAAAGTATCCTGTAGAGCCACCAGATTGTGTTGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004120.9 ENSMUST00000109509.8 |
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| CDS CAA 90 bp | ACATATTTCATGGAAAGGTTGTCCACACTGGGGATTATTACACACTaGATCAGGAATGGCACCATTCAGGTGACGGGCATAACAGATTCC | + |
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Preference number: 6 (lower is better) Translates to: TYFMERLSTLGIITH*IRNGTIQVTGITDS Trigger: GGAATCTGTTATGCCCGTCACCTGAATGGTGCCATTCCTGATCAAGTGTGTAATAATCCCCAGTGTGGACAACCTTTCCATGAAATATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004120.9 ENSMUST00000109509.8 ENSMUST00000134445.2 |
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| CDS TCA 72 bp | ATCATGTCAGCGGACACATGCCATCCAGATGGACTTTaGCTGGCTTTGTTCTCATACAGACATATTTCATGG | + |
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Preference number: 6 (lower is better) Translates to: IMSADTCHPDGL*LALFSYRHISW Trigger: CCATGAAATATGTCTGTATGAGAACAAAGCCAGTCAAAGTCCATCTGGATGGCATGTGTCCGCTGACATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134445.2 |
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| CDS CCA 72 bp | AGAAAATGGGACAGGAAAGTCCACAACACAATCTGGTaGCTCTACAGGATACTTTGCCTTCAACTTGACAGT | + |
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Preference number: 6 (lower is better) Translates to: RKWDRKVHNTIW*LYRILCLQLDS Trigger: ACTGTCAAGTTGAAGGCAAAGTATCCTGTAGAGCCACCAGATTGTGTTGTGGACTTTCCTGTCCCATTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004120.9 ENSMUST00000109509.8 |
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| CDS CCA 72 bp | AACAGAAAATGGGACAGGAAAGTCCACAACACAATCTaGTGGCTCTACAGGATACTTTGCCTTCAACTTGAC | + |
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Preference number: 6 (lower is better) Translates to: NRKWDRKVHNTI*WLYRILCLQLD Trigger: GTCAAGTTGAAGGCAAAGTATCCTGTAGAGCCACCAGATTGTGTTGTGGACTTTCCTGTCCCATTTTCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004120.9 ENSMUST00000109509.8 |
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| CDS CCA 72 bp | CTCAACCCTCTCAGCCACTCATACAGACATATTTCATaGAAAGGTTGTCCACACTGGGGATTATTACACACT | + |
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Preference number: 6 (lower is better) Translates to: LNPLSHSYRHIS*KGCPHWGLLHT Trigger: AGTGTGTAATAATCCCCAGTGTGGACAACCTTTCCATGAAATATGTCTGTATGAGTGGCTGAGAGGGTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004120.9 ENSMUST00000109509.8 |
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| CDS CCA 72 bp | TGTCAGCGGACACATGCCATCCAGATGGACTTTGACTaGCTTTGTTCTCATACAGACATATTTCATGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: CQRTHAIQMDFD*LCSHTDIFHGK Trigger: CTTTCCATGAAATATGTCTGTATGAGAACAAAGCCAGTCAAAGTCCATCTGGATGGCATGTGTCCGCTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134445.2 |
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| CDS CAA 72 bp | GATCATGTCAGCGGACACATGCCATCCAGATGGACTTaGACTGGCTTTGTTCTCATACAGACATATTTCATG | + |
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Preference number: 6 (lower is better) Translates to: DHVSGHMPSRWT*TGFVLIQTYFM Trigger: CATGAAATATGTCTGTATGAGAACAAAGCCAGTCAAAGTCCATCTGGATGGCATGTGTCCGCTGACATGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134445.2 |
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| CDS CAA 90 bp | AAAAGTGTAGATCATGTCAGCGGACACATGCCATCCAGATGGACTTaGACTGGCTTTGTTCTCATACAGACATATTTCATGGAAAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: KSVDHVSGHMPSRWT*TGFVLIQTYFMERL Trigger: CAACCTTTCCATGAAATATGTCTGTATGAGAACAAAGCCAGTCAAAGTCCATCTGGATGGCATGTGTCCGCTGACATGATCTACACTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134445.2 |
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| CDS TCA 72 bp | AGATCAGGAGAGTGCTTCATTCTCTGTTGGACTACTTaGTGGTACTCATTAAGTATATTTTTCAGCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RSGECFILCWTT*WYSLSIFFSCR Trigger: CCTGCAGCTGAAAAATATACTTAATGAGTACCATCAAGTAGTCCAACAGAGAATGAAGCACTCTCCTGATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004120.9 ENSMUST00000109509.8 |
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| CDS GCA 72 bp | CAGAAACTGCAAGAAGGTGGTTGTACACACAACTCTTaGTTATTCTTTAAAGCAACTTCCTGTTGGACTACT | + |
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Preference number: 6 (lower is better) Translates to: QKLQEGGCTHNS*LFFKATSCWTT Trigger: AGTAGTCCAACAGGAAGTTGCTTTAAAGAATAAGCAAGAGTTGTGTGTACAACCACCTTCTTGCAGTTTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136830.2 |
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| CDS GCA 72 bp | CAGAAACTGCAAGAAGGTGGTTGTACACACAACTCTTaGTTATTCTTTAAAGCAACTTCCAAAATCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: QKLQEGGCTHNS*LFFKATSKIIF Trigger: GAAGATGATTTTGGAAGTTGCTTTAAAGAATAAGCAAGAGTTGTGTGTACAACCACCTTCTTGCAGTTTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004120.9 ENSMUST00000109509.8 |
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| CDS TCA 72 bp | TGCTTATTCTTTAAAGCAACTTCCTGTTGGACTACTTaGTGGTACTCATTAAGTATATTTTTCAGCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: CLFFKATSCWTT*WYSLSIFFSCR Trigger: CCTGCAGCTGAAAAATATACTTAATGAGTACCATCAAGTAGTCCAACAGGAAGTTGCTTTAAAGAATAAGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136830.2 |
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