Pregenerated sensors for FANCG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028453Ensembl transcript IDs: ENSMUST00000030165.5
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAAGGAAGGAAGAAAAGTGCCATGAGCAGACAGTGATTTGTTCATaGAACCACTCTGGAACTAGACTGGTAGCAAGTAGATCAAGGTTC | + |
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Preference number: 1 (lower is better) Translates to: GRKEEKCHEQTVICS*NHSGTRLVASRSRF Trigger: GAACCTTGATCTACTTGCTACCAGTCTAGTTCCAGAGTGGTTCCATGAACAAATCACTGTCTGCTCATGGCACTTTTCTTCCTTCCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| 3UTR-3UTR TCA 90 bp | ATAGCCTTTCCCTCAGAAAGGCTTGTGTCTCAAGCTCTTACGGTAGATGGCAGGGGAAGAAAAGTGCCATaGGCAGACAGTGATTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: IAFPSERLVSQALTVDGRGRKVP*ADSDLF Trigger: GAACAAATCACTGTCTGCTCATGGCACTTTTCTTCC...CCTGCCATCTACCGTAAGAGCTTGAGACACAAGCCTTTCTGAGGGAAAGGCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| 3UTR-3UTR GCA 90 bp | TGCAGTTTAGTCCCCAGAATCCAACCTACCAAAAAGACAATGGGAAGGAAGGGGAATACCCAACTAGCTTaGCATGAGCCTTCCTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: CSLVPRIQPTKKTMGRKGNTQLA*HEPSFP Trigger: TGGGAAGGAAGGCTCATGGCAAGCTAGTTGGGTATT...CCCCTTCCTTCCCATTGTCTTTTTGGTAGGTTGGATTCTGGGGACTAAACTGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| 3UTR CCA 72 bp | CTCAGAAAGGCTTGTGTCTCAAGCTCTTACGGTAGATaGCAGGGTGGGAAAAGGGTAGGAATGGGGATTTTT | + |
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Preference number: 3 (lower is better) Translates to: LRKACVSSSYGR*QGGKRVGMGIF Trigger: AAAAATCCCCATTCCTACCCTTTTCCCACCCTGCCATCTACCGTAAGAGCTTGAGACACAAGCCTTTCTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| 3UTR-3UTR CAA 90 bp | TGCAGTTTAGTCCCCAGAATCCAACCTACCAAAAAGACAATGGGAAGGAAGGGGGACAGAAGACGGATGTaGGAAATAGAGCATCTTAAA | + |
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Preference number: 3 (lower is better) Translates to: CSLVPRIQPTKKTMGRKGDRRRM*EIEHLK Trigger: TTTAAGATGCTCTATTTCCAACATCCGTCTTCTGTC...CCCCTTCCTTCCCATTGTCTTTTTGGTAGGTTGGATTCTGGGGACTAAACTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| 3UTR TCA 72 bp | AGCATCTTAAACAGCCAATACCCAACTAGCTTGCCATaGGCCTTCCTTCCCATTCAACTATGTGTAGTAAGC | + |
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Preference number: 3 (lower is better) Translates to: SILNSQYPTSLP*AFLPIQLCVVS Trigger: GCTTACTACACATAGTTGAATGGGAAGGAAGGCTCATGGCAAGCTAGTTGGGTATTGGCTGTTTAAGATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CCA 90 bp | AGCCTTTCCCTCAGAAAGGCTTGTGTCTCAAGCTCTTACGGTAGATGGCAGGGTGGCAGCGTCCTCCAGTaGCAGCTGGCTGTGGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SLSLRKACVSSSYGRWQGGSVLQ*QLAVGL Trigger: GAGGCCCACAGCCAGCTGCCACTGGAGGACGCTGCC...ACCCTGCCATCTACCGTAAGAGCTTGAGACACAAGCCTTTCTGAGGGAAAGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR TCA 90 bp | AGCCTTTCCCTCAGAAAGGCTTGTGTCTCAAGCTCTTACGGTAGATGGCAGGGTGACTTGGGCTCCAGGTaGTGCTGGGCCTCCAGCACT | + |
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Preference number: 4 (lower is better) Translates to: SLSLRKACVSSSYGRWQGDLGSR*CWASST Trigger: AGTGCTGGAGGCCCAGCATCACCTGGAGCCCAAGTC...ACCCTGCCATCTACCGTAAGAGCTTGAGACACAAGCCTTTCTGAGGGAAAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR GCA 90 bp | AGCCTTTCCCTCAGAAAGGCTTGTGTCTCAAGCTCTTACGGTAGATGGCAGGGTCTCTGCAGCATCTTCTaGCCTCCCCGTCTGCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: SLSLRKACVSSSYGRWQGLCSIF*PPRLQA Trigger: TGCCTGCAGACGGGGAGGGCAGAAGATGCTGCAGAG...ACCCTGCCATCTACCGTAAGAGCTTGAGACACAAGCCTTTCTGAGGGAAAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CCA 90 bp | AGCCTTTCCCTCAGAAAGGCTTGTGTCTCAAGCTCTTACGGTAGATGGCAGGGTAGGCAGCAGCTCCGGTaGAAGGGAGGAAGCAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: SLSLRKACVSSSYGRWQGRQQLR*KGGSRE Trigger: CTCTCTGCTTCCTCCCTTCCACCGGAGCTGCTGCCT...ACCCTGCCATCTACCGTAAGAGCTTGAGACACAAGCCTTTCTGAGGGAAAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CCA 90 bp | ATAGCCTTTCCCTCAGAAAGGCTTGTGTCTCAAGCTCTTACGGTAGATGGCAGGCCTGAAGCAGGTGGGTaGCAGAGACCCAGACTGGGC | + |
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Preference number: 4 (lower is better) Translates to: IAFPSERLVSQALTVDGRPEAGG*QRPRLG Trigger: GCCCAGTCTGGGTCTCTGCCACCCACCTGCTTCAGG...CCTGCCATCTACCGTAAGAGCTTGAGACACAAGCCTTTCTGAGGGAAAGGCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR TCA 90 bp | ATAGCCTTTCCCTCAGAAAGGCTTGTGTCTCAAGCTCTTACGGTAGATGGCAGGGGGGCAGGCTCCCTGTaGTTAGCTCCTGGAAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: IAFPSERLVSQALTVDGRGAGSL*LAPGSL Trigger: AAGGCTTCCAGGAGCTAATCACAGGGAGCCTGCCCC...CCTGCCATCTACCGTAAGAGCTTGAGACACAAGCCTTTCTGAGGGAAAGGCTAT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR GCA 90 bp | AGCCTTTCCCTCAGAAAGGCTTGTGTCTCAAGCTCTTACGGTAGATGGCAGGGTGCAGAGAGGACAGAGTaGCACAGCTCCTTGAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: SLSLRKACVSSSYGRWQGAERTE*HSSLSP Trigger: GGGACTCAAGGAGCTGTGGCACTCTGTCCTCTCTGC...ACCCTGCCATCTACCGTAAGAGCTTGAGACACAAGCCTTTCTGAGGGAAAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR TCA 90 bp | AGCCTTTCCCTCAGAAAGGCTTGTGTCTCAAGCTCTTACGGTAGATGGCAGGGTCTCTGTGTGCCACAATaGAGAGGAGAGGCTGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: SLSLRKACVSSSYGRWQGLCVPQ*RGEAGS Trigger: TGACCCAGCCTCTCCTCTTCATTGTGGCACACAGAG...ACCCTGCCATCTACCGTAAGAGCTTGAGACACAAGCCTTTCTGAGGGAAAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR GCA 90 bp | AGCCTTTCCCTCAGAAAGGCTTGTGTCTCAAGCTCTTACGGTAGATGGCAGGGTTGGCCTGGCTCTGTGTaGCACAATGAAGAGGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: SLSLRKACVSSSYGRWQGWPGSV*HNEEER Trigger: CCTCTCCTCTTCATTGTGGCACACAGAGCCAGGCCA...ACCCTGCCATCTACCGTAAGAGCTTGAGACACAAGCCTTTCTGAGGGAAAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR GCA 90 bp | CCAGCCTCAGGAGCAAAAGAGTTACTTAGAAACAATCAGTTCCAGCCACTCTCCGCCTGCCTGGATCAGTaGTGCTGCTGCCTCCAGACA | + |
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Preference number: 4 (lower is better) Translates to: PASGAKELLRNNQFQPLSACLDQ*CCCLQT Trigger: TGTCTGGAGGCAGCAGCAGCACTGATCCAGGCAGGC...GGAGAGTGGCTGGAACTGATTGTTTCTAAGTAACTCTTTTGCTCCTGAGGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CCA 90 bp | AGCCTTTCCCTCAGAAAGGCTTGTGTCTCAAGCTCTTACGGTAGATGGCAGGGTGGCAGAGACCCAGACTaGGCAACACGGCAGTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: SLSLRKACVSSSYGRWQGGRDPD*ATRQFF Trigger: AAAGAACTGCCGTGTTGCCCAGTCTGGGTCTCTGCC...ACCCTGCCATCTACCGTAAGAGCTTGAGACACAAGCCTTTCTGAGGGAAAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR TCA 90 bp | TCATGGAACCACTCTGGAACTAGACTGGTAGCAAGTAGATCAAGGTTCACAGGACGGCGGACACAGACCTaGGGCTGCTTCATGCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: SWNHSGTRLVASRSRFTGRRTQT*GCFMQV Trigger: AACCTGCATGAAGCAGCCTCAGGTCTGTGTCCGCCG...TCCTGTGAACCTTGATCTACTTGCTACCAGTCTAGTTCCAGAGTGGTTCCATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR GCA 90 bp | GGACCAGCCTCAGGAGCAAAAGAGTTACTTAGAAACAATCAGTTCCAGCCACTCAGCTCCTTGAGTCCCTaGTGTGACTTGGGCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GPASGAKELLRNNQFQPLSSLSP*CDLGSR Trigger: CCTGGAGCCCAAGTCACAGCAGGGACTCAAGGAGCT...GAGTGGCTGGAACTGATTGTTTCTAAGTAACTCTTTTGCTCCTGAGGCTGGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CCA 90 bp | ATAGCCTTTCCCTCAGAAAGGCTTGTGTCTCAAGCTCTTACGGTAGATGGCAGGGTCAGGTCCTCCAGGTaGTCGGTACTCATCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: IAFPSERLVSQALTVDGRVRSSR*SVLIQK Trigger: CTTCTGGATGAGTACCGACCACCTGGAGGACCTGAC...CCTGCCATCTACCGTAAGAGCTTGAGACACAAGCCTTTCTGAGGGAAAGGCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CCA 90 bp | TGCAGTTTAGTCCCCAGAATCCAACCTACCAAAAAGACAATGGGAAGGAAGGGGTTGCTAGCAGGTGCTTaGCCTGGCTCTGTGTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: CSLVPRIQPTKKTMGRKGLLAGA*PGSVCH Trigger: GTGGCACACAGAGCCAGGCCAAGCACCTGCTAGCAA...CCCCTTCCTTCCCATTGTCTTTTTGGTAGGTTGGATTCTGGGGACTAAACTGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CCA 90 bp | GGACCAGCCTCAGGAGCAAAAGAGTTACTTAGAAACAATCAGTTCCAGCCACTCTGGTATCCTGGCCACTaGCTACCCACTCCAGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: GPASGAKELLRNNQFQPLWYPGH*LPTPVH Trigger: GTGGACTGGAGTGGGTAGCCAGTGGCCAGGATACCA...GAGTGGCTGGAACTGATTGTTTCTAAGTAACTCTTTTGCTCCTGAGGCTGGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR TCA 90 bp | TCATGGAACCACTCTGGAACTAGACTGGTAGCAAGTAGATCAAGGTTCACAGGACTTGAGTCCCTGCTGTaGCTTGGGCTCCAGGTGATG | + |
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Preference number: 4 (lower is better) Translates to: SWNHSGTRLVASRSRFTGLESLL*LGLQVM Trigger: CATCACCTGGAGCCCAAGTCACAGCAGGGACTCAAG...TCCTGTGAACCTTGATCTACTTGCTACCAGTCTAGTTCCAGAGTGGTTCCATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR GCA 90 bp | GGACCAGCCTCAGGAGCAAAAGAGTTACTTAGAAACAATCAGTTCCAGCCACTCCCTGAGGCTGCTTCATaGAGGTTGCTCTGTGCATGG | + |
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Preference number: 4 (lower is better) Translates to: GPASGAKELLRNNQFQPLPEAAS*RLLCAW Trigger: CCATGCACAGAGCAACCTGCATGAAGCAGCCTCAGG...GAGTGGCTGGAACTGATTGTTTCTAAGTAACTCTTTTGCTCCTGAGGCTGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR GCA 90 bp | GGACCAGCCTCAGGAGCAAAAGAGTTACTTAGAAACAATCAGTTCCAGCCACTCGTCCAGGTAATGCTCTaGAGCATCTTCTGCCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: GPASGAKELLRNNQFQPLVQVML*SIFCPP Trigger: GGGAGGGCAGAAGATGCTGCAGAGCATTACCTGGAC...GAGTGGCTGGAACTGATTGTTTCTAAGTAACTCTTTTGCTCCTGAGGCTGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CCA 90 bp | AGCCTTTCCCTCAGAAAGGCTTGTGTCTCAAGCTCTTACGGTAGATGGCAGGGTGCCTGTCTAACAAGCTaGTCGTTCTTTTCCCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: SLSLRKACVSSSYGRWQGACLTS*SFFSLH Trigger: GTGGAGGGAAAAGAACGACCAGCTTGTTAGACAGGC...ACCCTGCCATCTACCGTAAGAGCTTGAGACACAAGCCTTTCTGAGGGAAAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CCA 90 bp | TGCAGTTTAGTCCCCAGAATCCAACCTACCAAAAAGACAATGGGAAGGAAGGGGAGACAGCTTGAAGGCTaGCCAGGCAGTGTAAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: CSLVPRIQPTKKTMGRKGRQLEG*PGSVRQ Trigger: CTGCCTTACACTGCCTGGCCAGCCTTCAAGCTGTCT...CCCCTTCCTTCCCATTGTCTTTTTGGTAGGTTGGATTCTGGGGACTAAACTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CCA 90 bp | GGACCAGCCTCAGGAGCAAAAGAGTTACTTAGAAACAATCAGTTCCAGCCACTCAGGTTGCTCTGTGCATaGGGCAGGCTCCCTGTGATT | + |
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Preference number: 4 (lower is better) Translates to: GPASGAKELLRNNQFQPLRLLCA*GRLPVI Trigger: AATCACAGGGAGCCTGCCCCATGCACAGAGCAACCT...GAGTGGCTGGAACTGATTGTTTCTAAGTAACTCTTTTGCTCCTGAGGCTGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CCA 90 bp | TGCAGTTTAGTCCCCAGAATCCAACCTACCAAAAAGACAATGGGAAGGAAGGGGGACCTAGAGAGGAGGTaGGTGGGGAGAACCTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: CSLVPRIQPTKKTMGRKGDLERR*VGRTLS Trigger: AGACAAGGTTCTCCCCACCCACCTCCTCTCTAGGTC...CCCCTTCCTTCCCATTGTCTTTTTGGTAGGTTGGATTCTGGGGACTAAACTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CCA 90 bp | CCAGCCTCAGGAGCAAAAGAGTTACTTAGAAACAATCAGTTCCAGCCACTCTCCAAGGCTTTGGTATCCTaGCCACTGGCTACCCACTCC | + |
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Preference number: 4 (lower is better) Translates to: PASGAKELLRNNQFQPLSKALVS*PLATHS Trigger: GGAGTGGGTAGCCAGTGGCCAGGATACCAAAGCCTT...GGAGAGTGGCTGGAACTGATTGTTTCTAAGTAACTCTTTTGCTCCTGAGGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR TCA 90 bp | GCCTCAGGAGCAAAAGAGTTACTTAGAAACAATCAGTTCCAGCCACTCTCCAAAACTCCAGTCCACGACTaGTCAGAGCAGCCACTCGCA | + |
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Preference number: 4 (lower is better) Translates to: ASGAKELLRNNQFQPLSKTPVHD*SEQPLA Trigger: TGCGAGTGGCTGCTCTGATCAGTCGTGGACTGGAGT...TTTGGAGAGTGGCTGGAACTGATTGTTTCTAAGTAACTCTTTTGCTCCTGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR TCA 90 bp | GGACCAGCCTCAGGAGCAAAAGAGTTACTTAGAAACAATCAGTTCCAGCCACTCGGCATATCTGCACACTaGGGAGGAAGTCACTTAAGG | + |
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Preference number: 4 (lower is better) Translates to: GPASGAKELLRNNQFQPLGISAH*GGSHLR Trigger: CCTTAAGTGACTTCCTCCTCAGTGTGCAGATATGCC...GAGTGGCTGGAACTGATTGTTTCTAAGTAACTCTTTTGCTCCTGAGGCTGGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR TCA 90 bp | TGCAGTTTAGTCCCCAGAATCCAACCTACCAAAAAGACAATGGGAAGGAAGGGGCTAAGTGCCTCTTTCTaGGCCTTTAGTTGTGACCAG | + |
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Preference number: 4 (lower is better) Translates to: CSLVPRIQPTKKTMGRKGLSASF*AFSCDQ Trigger: CTGGTCACAACTAAAGGCTCAGAAAGAGGCACTTAG...CCCCTTCCTTCCCATTGTCTTTTTGGTAGGTTGGATTCTGGGGACTAAACTGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR GCA 90 bp | TGCAGTTTAGTCCCCAGAATCCAACCTACCAAAAAGACAATGGGAAGGAAGGGGGAATCCCTGGTGAGTTaGTTAGCCTGTCTAACAAGC | + |
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Preference number: 4 (lower is better) Translates to: CSLVPRIQPTKKTMGRKGESLVS*LACLTS Trigger: GCTTGTTAGACAGGCTAAGCAACTCACCAGGGATTC...CCCCTTCCTTCCCATTGTCTTTTTGGTAGGTTGGATTCTGGGGACTAAACTGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR GCA 90 bp | GCCTCAGGAGCAAAAGAGTTACTTAGAAACAATCAGTTCCAGCCACTCTCCAAATTGGCGGCAGGCAAATaGAGTCAGAAGGACATCCCT | + |
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Preference number: 4 (lower is better) Translates to: ASGAKELLRNNQFQPLSKLAAGK*SQKDIP Trigger: AGGGATGTCCTTCTGACTGCATTTGCCTGCCGCCAA...TTTGGAGAGTGGCTGGAACTGATTGTTTCTAAGTAACTCTTTTGCTCCTGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR GCA 90 bp | AAAGAGTTACTTAGAAACAATCAGTTCCAGCCACTCTCCAAAGAGGATAAGGCAATGCAGGTTGCTCTGTaGATGGGGCAGGCTCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: KELLRNNQFQPLSKEDKAMQVAL*MGQAPC Trigger: ACAGGGAGCCTGCCCCATGCACAGAGCAACCTGCAT...TGCCTTATCCTCTTTGGAGAGTGGCTGGAACTGATTGTTTCTAAGTAACTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CCA 90 bp | TGCAGTTTAGTCCCCAGAATCCAACCTACCAAAAAGACAATGGGAAGGAAGGGGACAAGGAGGACATTTTaGGAAGCAGAGACGAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: CSLVPRIQPTKKTMGRKGTRRTF*EAETRY Trigger: GTACCTCGTCTCTGCTTCCCAAAATGTCCTCCTTGT...CCCCTTCCTTCCCATTGTCTTTTTGGTAGGTTGGATTCTGGGGACTAAACTGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CCA 90 bp | TGCAGTTTAGTCCCCAGAATCCAACCTACCAAAAAGACAATGGGAAGGAAGGGGCTTTGGCTCTTTTCCTaGCATTTTCCCACAAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: CSLVPRIQPTKKTMGRKGLWLFS*HFPTRR Trigger: CCTCCTTGTGGGAAAATGCCAGGAAAAGAGCCAAAG...CCCCTTCCTTCCCATTGTCTTTTTGGTAGGTTGGATTCTGGGGACTAAACTGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CCA 90 bp | TCATGGAACCACTCTGGAACTAGACTGGTAGCAAGTAGATCAAGGTTCACAGGAGTTGCCTATATACTCTaGAAGCCTCCAGAAGCGGAA | + |
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Preference number: 4 (lower is better) Translates to: SWNHSGTRLVASRSRFTGVAYIL*KPPEAE Trigger: TTCCGCTTCTGGAGGCTTCCAGAGTATATAGGCAAC...TCCTGTGAACCTTGATCTACTTGCTACCAGTCTAGTTCCAGAGTGGTTCCATGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CCA 90 bp | TCATGGAACCACTCTGGAACTAGACTGGTAGCAAGTAGATCAAGGTTCACAGGAAGTCACTTAAGGCTTTaGTATCCTGGCCACTGGCTA | + |
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Preference number: 4 (lower is better) Translates to: SWNHSGTRLVASRSRFTGSHLRL*YPGHWL Trigger: TAGCCAGTGGCCAGGATACCAAAGCCTTAAGTGACT...TCCTGTGAACCTTGATCTACTTGCTACCAGTCTAGTTCCAGAGTGGTTCCATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR TCA 90 bp | AAAGAGTTACTTAGAAACAATCAGTTCCAGCCACTCTCCAAAGAGGATAAGGCAAGATCCTCAGAGGACTaGGTCTGGCTGCCATTTAGG | + |
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Preference number: 4 (lower is better) Translates to: KELLRNNQFQPLSKEDKARSSED*VWLPFR Trigger: CCTAAATGGCAGCCAGACTCAGTCCTCTGAGGATCT...TGCCTTATCCTCTTTGGAGAGTGGCTGGAACTGATTGTTTCTAAGTAACTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR GCA 90 bp | CCAGCCTCAGGAGCAAAAGAGTTACTTAGAAACAATCAGTTCCAGCCACTCTCCAGTCAAGTACAACAGTaGTCTCTGTGGATTTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: PASGAKELLRNNQFQPLSSQVQQ*SLWISH Trigger: ATGGGAAATCCACAGAGAGCACTGTTGTACTTGACT...GGAGAGTGGCTGGAACTGATTGTTTCTAAGTAACTCTTTTGCTCCTGAGGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CCA 90 bp | GCCTCAGGAGCAAAAGAGTTACTTAGAAACAATCAGTTCCAGCCACTCTCCAAACAACAGTGCTCTCTGTaGATTTCCCATCTTACGGAG | + |
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Preference number: 4 (lower is better) Translates to: ASGAKELLRNNQFQPLSKQQCSL*ISHLTE Trigger: CTCCGTAAGATGGGAAATCCACAGAGAGCACTGTTG...TTTGGAGAGTGGCTGGAACTGATTGTTTCTAAGTAACTCTTTTGCTCCTGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CCA 90 bp | GCCTCAGGAGCAAAAGAGTTACTTAGAAACAATCAGTTCCAGCCACTCTCCAAATTTCAGAACTATGGGTaGCACTCAAGGCCTCAACCA | + |
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Preference number: 4 (lower is better) Translates to: ASGAKELLRNNQFQPLSKFQNYG*HSRPQP Trigger: TGGTTGAGGCCTTGAGTGCCACCCATAGTTCTGAAA...TTTGGAGAGTGGCTGGAACTGATTGTTTCTAAGTAACTCTTTTGCTCCTGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CCA 90 bp | GGACCAGCCTCAGGAGCAAAAGAGTTACTTAGAAACAATCAGTTCCAGCCACTCAACACGGCAGTTCTTTaGCTCTTTTCCTGGCATTTT | + |
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Preference number: 4 (lower is better) Translates to: GPASGAKELLRNNQFQPLNTAVL*LFSWHF Trigger: AAAATGCCAGGAAAAGAGCCAAAGAACTGCCGTGTT...GAGTGGCTGGAACTGATTGTTTCTAAGTAACTCTTTTGCTCCTGAGGCTGGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CCA 90 bp | GGTCCTCCAGGTGGTCGGTACTCATCCAGAAGACAGCTTGAAGGCTaGCCAGGCAGTGTAAGGCAGGCAGCAGCTCCGGTGGAAGGGAGG | + |
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Preference number: 5 (lower is better) Translates to: GPPGGRYSSRRQLEG*PGSVRQAAAPVEGR Trigger: CCTCCCTTCCACCGGAGCTGCTGCCTGCCTTACACTGCCTGGCCAGCCTTCAAGCTGTCTTCTGGATGAGTACCGACCACCTGGAGGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CCA 90 bp | GGATTTCCCATCTTACGGAGACAGGCCCCCAGGGCCGTGTACACCTaGACTAACACGGACGGCGGACACAGACCTGAGGCTGCTTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: GFPILRRQAPRAVYT*TNTDGGHRPEAASC Trigger: GCATGAAGCAGCCTCAGGTCTGTGTCCGCCGTCCGTGTTAGTCCAGGTGTACACGGCCCTGGGGGCCTGTCTCCGTAAGATGGGAAATCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS TCA 90 bp | GGAAGCAGAGAGGACAGAGTGCCACAGCTCCTTGAGTCCCTGCTGTaGCTTGGGCTCCAGGTGATGCTGGGCCTCCAGCACTCTTTCGAG | + |
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Preference number: 5 (lower is better) Translates to: GSREDRVPQLLESLL*LGLQVMLGLQHSFE Trigger: CTCGAAAGAGTGCTGGAGGCCCAGCATCACCTGGAGCCCAAGTCACAGCAGGGACTCAAGGAGCTGTGGCACTCTGTCCTCTCTGCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS TCA 90 bp | AGGCTTTGGTATCCTGGCCACTGGCTACCCACTCCAGTCCACGACTaGTCAGAGCAGCCACTCGCAGCTGTTTCAGTGCCACGTCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: RLWYPGHWLPTPVHD*SEQPLAAVSVPRQT Trigger: GGTCTGACGTGGCACTGAAACAGCTGCGAGTGGCTGCTCTGATCAGTCGTGGACTGGAGTGGGTAGCCAGTGGCCAGGATACCAAAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS TCA 90 bp | AGGCTGCTTCATGCAGGTTGCTCTGTGCATGGGGCAGGCTCCCTGTaGTTAGCTCCTGGAAGCCTTGGCGGCAGGCAAATGCAGTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: RLLHAGCSVHGAGSL*LAPGSLGGRQMQSE Trigger: TTCTGACTGCATTTGCCTGCCGCCAAGGCTTCCAGGAGCTAATCACAGGGAGCCTGCCCCATGCACAGAGCAACCTGCATGAAGCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS GCA 90 bp | CAGGCAAATGCAGTCAGAAGGACATCCCTCAAACTCTCGGCATCCTaGAGAATCAGTGGGGCGGGTGACTCCTCAGCTGGAGGACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QANAVRRTSLKLSAS*RISGAGDSSAGGLQ Trigger: CTGGAGTCCTCCAGCTGAGGAGTCACCCGCCCCACTGATTCTGCAGGATGCCGAGAGTTTGAGGGATGTCCTTCTGACTGCATTTGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CCA 90 bp | CCTTGTAGAGTGAGGAGGAGTTCCCTAAGCCCTTCCAGTGTGTCTTaGGCCGATTGCTGTCGCCTCAGAGAGGGACGAGAATCCCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PCRVRRSSLSPSSVS*ADCCRLREGRESLV Trigger: CACCAGGGATTCTCGTCCCTCTCTGAGGCGACAGCAATCGGCCCAAGACACACTGGAAGGGCTTAGGGAACTCCTCCTCACTCTACAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CCA 90 bp | CTCTGTGCATGGGGCAGGCTCCCTGTGATTAGCTCCTGGAAGCCTTaGCGGCAGGCAAATGCAGTCAGAAGGACATCCCTCAAACTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LCAWGRLPVISSWKP*RQANAVRRTSLKLS Trigger: CGAGAGTTTGAGGGATGTCCTTCTGACTGCATTTGCCTGCCGCCAAGGCTTCCAGGAGCTAATCACAGGGAGCCTGCCCCATGCACAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS GCA 90 bp | GTGAGGAGGAGTTCCCTAAGCCCTTCCAGTGTGTCTTGGGCCGATTaGTGTCGCCTCAGAGAGGGACGAGAATCCCTGGTGAGTTGCTTA | + |
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Preference number: 5 (lower is better) Translates to: VRRSSLSPSSVSWAD*CRLREGRESLVSCL Trigger: TAAGCAACTCACCAGGGATTCTCGTCCCTCTCTGAGGCGACAGCAATCGGCCCAAGACACACTGGAAGGGCTTAGGGAACTCCTCCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS GCA 90 bp | TCTGCAGGCATCGACTTGCTAGCAGGTGCTTGGCCTGGCTCTGTGTaGCACAATGAAGAGGAGAGGCTGGGTCAGGTTGTGGAAGTAGCA | + |
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Preference number: 5 (lower is better) Translates to: SAGIDLLAGAWPGSV*HNEEERLGQVVEVA Trigger: TGCTACTTCCACAACCTGACCCAGCCTCTCCTCTTCATTGTGGCACACAGAGCCAGGCCAAGCACCTGCTAGCAAGTCGATGCCTGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS GCA 90 bp | CTCCAGTCCACGACTGATCAGAGCAGCCACTCGCAGCTGTTTCAGTaGCACGTCAGACCTACACTTCTGCTCACAGTCGGAGCCTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: LQSTTDQSSHSQLFQ*HVRPTLLLTVGALF Trigger: GAACAAGGCTCCGACTGTGAGCAGAAGTGTAGGTCTGACGTGGCACTGAAACAGCTGCGAGTGGCTGCTCTGATCAGTCGTGGACTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CCA 90 bp | CGTCCTCCAGTGGCAGCTGGCTGTGGGCCTCCCGCCAAAAAGCACTaGCCTCATTCTTCCGATCCAATCTTTTCAGAGTCTGAAGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: RPPVAAGCGPPAKKH*PHSSDPIFSESEAG Trigger: ACCTGCTTCAGACTCTGAAAAGATTGGATCGGAAGAATGAGGCCAGTGCTTTTTGGCGGGAGGCCCACAGCCAGCTGCCACTGGAGGACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS GCA 90 bp | GCCGATTGCTGTCGCCTCAGAGAGGGACGAGAATCCCTGGTGAGTTaGTTAGCCTGTCTAACAAGCTGGTCGTTCTTTTCCCTCCACAGG | + |
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Preference number: 5 (lower is better) Translates to: ADCCRLREGRESLVS*LACLTSWSFFSLHR Trigger: CCTGTGGAGGGAAAAGAACGACCAGCTTGTTAGACAGGCTAAGCAACTCACCAGGGATTCTCGTCCCTCTCTGAGGCGACAGCAATCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CCA 90 bp | CTGCCTCCAGACATAACTCTGGTATACAGGGACCTAGAGAGGAGGTaGGTGGGGAGAACCTTGTCTCTGAGCCACCCAGCAACATTGCCA | + |
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Preference number: 5 (lower is better) Translates to: LPPDITLVYRDLERR*VGRTLSLSHPATLP Trigger: TGGCAATGTTGCTGGGTGGCTCAGAGACAAGGTTCTCCCCACCCACCTCCTCTCTAGGTCCCTGTATACCAGAGTTATGTCTGGAGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CCA 90 bp | AGCAGCTCCTCACACACAGTCAAAGCGTCTAAGGCTCGGCCTGCCTaGATCAGTGCTGCTGCTGCCTCCAGACATAACTCTGGTATACAG | + |
|
Preference number: 5 (lower is better) Translates to: SSSSHTVKASKARPA*ISAAAASRHNSGIQ Trigger: CTGTATACCAGAGTTATGTCTGGAGGCAGCAGCAGCACTGATCCAGGCAGGCCGAGCCTTAGACGCTTTGACTGTGTGTGAGGAGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CAA 90 bp | AGCCTTTCCCTCAGAAAGGCTTGTGTCTCAAGCTCTTACGGTAGATGGCAGGGTGCTGCTTCATGCAGGTaGCTCTGTGCATGGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLSLRKACVSSSYGRWQGAASCR*LCAWGR Trigger: CCTGCCCCATGCACAGAGCAACCTGCATGAAGCAGC...ACCCTGCCATCTACCGTAAGAGCTTGAGACACAAGCCTTTCTGAGGGAAAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CAA 90 bp | AGCCTTTCCCTCAGAAAGGCTTGTGTCTCAAGCTCTTACGGTAGATGGCAGGGTCTTGCTAGCAGGTGCTaGGCCTGGCTCTGTGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLSLRKACVSSSYGRWQGLASRC*AWLCVP Trigger: TGGCACACAGAGCCAGGCCAAGCACCTGCTAGCAAG...ACCCTGCCATCTACCGTAAGAGCTTGAGACACAAGCCTTTCTGAGGGAAAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS TCA 90 bp | TTTCCCACAAGGAGGACATTTTGGGAAGCAGAGACGAGGTACGGTTaGGCAGCTCCTCACACACAGTCAAAGCGTCTAAGGCTCGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FPTRRTFWEAETRYG*AAPHTQSKRLRLGL Trigger: CAGGCCGAGCCTTAGACGCTTTGACTGTGTGTGAGGAGCTGCTCAACCGTACCTCGTCTCTGCTTCCCAAAATGTCCTCCTTGTGGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CCA 90 bp | CATATCTGCACACTGAGGAGGAAGTCACTTAAGGCTTTGGTATCCTaGCCACTGGCTACCCACTCCAGTCCACGACTGATCAGAGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: HICTLRRKSLKALVS*PLATHSSPRLIRAA Trigger: GGCTGCTCTGATCAGTCGTGGACTGGAGTGGGTAGCCAGTGGCCAGGATACCAAAGCCTTAAGTGACTTCCTCCTCAGTGTGCAGATATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS TCA 90 bp | CATCGACTTGCTAGCAGGTGCTTGGCCTGGCTCTGTGTGCCACAATaGAGAGGAGAGGCTGGGTCAGGTTGTGGAAGTAGCAATTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: HRLASRCLAWLCVPQ*RGEAGSGCGSSNST Trigger: AGTAGAATTGCTACTTCCACAACCTGACCCAGCCTCTCCTCTTCATTGTGGCACACAGAGCCAGGCCAAGCACCTGCTAGCAAGTCGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CAA 90 bp | ATAGCCTTTCCCTCAGAAAGGCTTGTGTCTCAAGCTCTTACGGTAGATGGCAGGGCGGAAGGGCACAGGTaGTTCCCACTTTCAGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: IAFPSERLVSQALTVDGRAEGHR*FPLSGL Trigger: AAGCCCTGAAAGTGGGAACAACCTGTGCCCTTCCGC...CCTGCCATCTACCGTAAGAGCTTGAGACACAAGCCTTTCTGAGGGAAAGGCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CCA 90 bp | ACCGAAGTCCCAAACTCCTCAAGGAAGGCTTCGCGGTTAGGGGGATaGATCCAGCTCAAACAGGTTTCTAAATACAGTGGAAGAGACCCG | + |
|
Preference number: 5 (lower is better) Translates to: TEVPNSSRKASRLGG*IQLKQVSKYSGRDP Trigger: CGGGTCTCTTCCACTGTATTTAGAAACCTGTTTGAGCTGGATCCATCCCCCTAACCGCGAAGCCTTCCTTGAGGAGTTTGGGACTTCGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CAA 90 bp | CCAGCCTCAGGAGCAAAAGAGTTACTTAGAAACAATCAGTTCCAGCCACTCTCCCATCCAGAAGACAGCTaGAAGGCTGGCCAGGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PASGAKELLRNNQFQPLSHPEDS*KAGQAV Trigger: CACTGCCTGGCCAGCCTTCAAGCTGTCTTCTGGATG...GGAGAGTGGCTGGAACTGATTGTTTCTAAGTAACTCTTTTGCTCCTGAGGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CAA 90 bp | CCAGCCTCAGGAGCAAAAGAGTTACTTAGAAACAATCAGTTCCAGCCACTCTCCTCGGAGCCTTGTTCTTaGTCCTCAGGCAGGGTCCGA | + |
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Preference number: 5 (lower is better) Translates to: PASGAKELLRNNQFQPLSSEPCS*SSGRVR Trigger: TCGGACCCTGCCTGAGGACAAAGAACAAGGCTCCGA...GGAGAGTGGCTGGAACTGATTGTTTCTAAGTAACTCTTTTGCTCCTGAGGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CAA 90 bp | ATAGCCTTTCCCTCAGAAAGGCTTGTGTCTCAAGCTCTTACGGTAGATGGCAGGCTCACAGTCGGAGCCTaGTTCTTTGTCCTCAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: IAFPSERLVSQALTVDGRLTVGA*FFVLRQ Trigger: CTGCCTGAGGACAAAGAACAAGGCTCCGACTGTGAG...CCTGCCATCTACCGTAAGAGCTTGAGACACAAGCCTTTCTGAGGGAAAGGCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS TCA 90 bp | GGAGGACTCCAGGATTTTAGCAGTAGTAGCAGATCCTCAGAGGACTaGGTCTGGCTGCCATTTAGGGTTTGTAACAGCAAGGTCAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: GGLQDFSSSSRSSED*VWLPFRVCNSKVRS Trigger: GGACCTGACCTTGCTGTTACAAACCCTAAATGGCAGCCAGACTCAGTCCTCTGAGGATCTGCTACTACTGCTAAAATCCTGGAGTCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CCA 90 bp | GAGGGACGAGAATCCCTGGTGAGTTGCTTAGCCTGTCTAACAAGCTaGTCGTTCTTTTCCCTCCACAGGTCCAGGCTACTGGAAAATGTT | + |
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Preference number: 5 (lower is better) Translates to: EGRESLVSCLACLTS*SFFSLHRSRLLENV Trigger: AACATTTTCCAGTAGCCTGGACCTGTGGAGGGAAAAGAACGACCAGCTTGTTAGACAGGCTAAGCAACTCACCAGGGATTCTCGTCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CAA 90 bp | GGACCAGCCTCAGGAGCAAAAGAGTTACTTAGAAACAATCAGTTCCAGCCACTCAGCCACCCAGCAACATaGCCAGCAGGTCCAGGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: GPASGAKELLRNNQFQPLSHPAT*PAGPGN Trigger: ATTACCTGGACCTGCTGGCAATGTTGCTGGGTGGCT...GAGTGGCTGGAACTGATTGTTTCTAAGTAACTCTTTTGCTCCTGAGGCTGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CAA 90 bp | TGCAGTTTAGTCCCCAGAATCCAACCTACCAAAAAGACAATGGGAAGGAAGGGGCTACTGGAAAATGTTTaGGGGAGGGCTGGAATGACC | + |
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Preference number: 5 (lower is better) Translates to: CSLVPRIQPTKKTMGRKGLLENV*GRAGMT Trigger: GGTCATTCCAGCCCTCCCCAAAACATTTTCCAGTAG...CCCCTTCCTTCCCATTGTCTTTTTGGTAGGTTGGATTCTGGGGACTAAACTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CAA 90 bp | ATAGCCTTTCCCTCAGAAAGGCTTGTGTCTCAAGCTCTTACGGTAGATGGCAGGAGAATCCCTGGTGAGTaGCTTAGCCTGTCTAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: IAFPSERLVSQALTVDGRRIPGE*LSLSNK Trigger: CTTGTTAGACAGGCTAAGCAACTCACCAGGGATTCT...CCTGCCATCTACCGTAAGAGCTTGAGACACAAGCCTTTCTGAGGGAAAGGCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CAA 90 bp | CCAGCCTCAGGAGCAAAAGAGTTACTTAGAAACAATCAGTTCCAGCCACTCTCCTCTTTCGAGGCCCCTTaGAAGATCCTGGGTAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: PASGAKELLRNNQFQPLSSFEAP*KILGKI Trigger: GATCTTACCCAGGATCTTCAAAGGGGCCTCGAAAGA...GGAGAGTGGCTGGAACTGATTGTTTCTAAGTAACTCTTTTGCTCCTGAGGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CAA 90 bp | AAAGAGTTACTTAGAAACAATCAGTTCCAGCCACTCTCCAAAGAGGATAAGGCAGAGTGCCACAGCTCCTaGAGTCCCTGCTGTGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: KELLRNNQFQPLSKEDKAECHSS*SPCCDL Trigger: CAAGTCACAGCAGGGACTCAAGGAGCTGTGGCACTC...TGCCTTATCCTCTTTGGAGAGTGGCTGGAACTGATTGTTTCTAAGTAACTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CAA 90 bp | GGACCAGCCTCAGGAGCAAAAGAGTTACTTAGAAACAATCAGTTCCAGCCACTCCAACACGGCAGTTCTTaGGCTCTTTTCCTGGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: GPASGAKELLRNNQFQPLQHGSS*ALFLAF Trigger: AAATGCCAGGAAAAGAGCCAAAGAACTGCCGTGTTG...GAGTGGCTGGAACTGATTGTTTCTAAGTAACTCTTTTGCTCCTGAGGCTGGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CCA 90 bp | AGTAGCAATTCTACTTCAATGAGACTTTTGAATGTTTCAGAACTATaGGTGGCACTCAAGGCCTCAACCAGCAGTTCCAGACTCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSNSTSMRLLNVSEL*VALKASTSSSRLSS Trigger: ACTGGAGAGTCTGGAACTGCTGGTTGAGGCCTTGAGTGCCACCCATAGTTCTGAAACATTCAAAAGTCTCATTGAAGTAGAATTGCTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS-3UTR CAA 90 bp | AAAGAGTTACTTAGAAACAATCAGTTCCAGCCACTCTCCAAAGAGGATAAGGCACACAAGGAGGACATTTaGGGAAGCAGAGACGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KELLRNNQFQPLSKEDKAHKEDI*GSRDEV Trigger: TACCTCGTCTCTGCTTCCCAAAATGTCCTCCTTGTG...TGCCTTATCCTCTTTGGAGAGTGGCTGGAACTGATTGTTTCTAAGTAACTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CCA 72 bp | AGAGACCCGGCAGCGTCCTCCAGTGGCAGCTGGCTGTaGGCCTCCCGCCAAAAAGCACTGGCCTCATTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RDPAASSSGSWL*ASRQKALASFF Trigger: GAAGAATGAGGCCAGTGCTTTTTGGCGGGAGGCCCACAGCCAGCTGCCACTGGAGGACGCTGCCGGGTCTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS TCA 72 bp | GAGGACAGAGTGCCACAGCTCCTTGAGTCCCTGCTGTaGCTTGGGCTCCAGGTGATGCTGGGCCTCCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: EDRVPQLLESLL*LGLQVMLGLQH Trigger: GTGCTGGAGGCCCAGCATCACCTGGAGCCCAAGTCACAGCAGGGACTCAAGGAGCTGTGGCACTCTGTCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CAA 72 bp | CAGCATCTTCTGCCCTCCCCGTCTGCAGGCATCGACTaGCTAGCAGGTGCTTGGCCTGGCTCTGTGTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: QHLLPSPSAGID*LAGAWPGSVCH Trigger: GTGGCACACAGAGCCAGGCCAAGCACCTGCTAGCAAGTCGATGCCTGCAGACGGGGAGGGCAGAAGATGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS GCA 72 bp | AGCTCCGGTGGAAGGGAGGAAGCAGAGAGGACAGAGTaGCACAGCTCCTTGAGTCCCTGCTGTGACTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSGGREEAERTE*HSSLSPCCDLG Trigger: GCCCAAGTCACAGCAGGGACTCAAGGAGCTGTGGCACTCTGTCCTCTCTGCTTCCTCCCTTCCACCGGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CAA 72 bp | GACGGCGGACACAGACCTGAGGCTGCTTCATGCAGGTaGCTCTGTGCATGGGGCAGGCTCCCTGTGATTAGC | + |
|
Preference number: 6 (lower is better) Translates to: DGGHRPEAASCR*LCAWGRLPVIS Trigger: GCTAATCACAGGGAGCCTGCCCCATGCACAGAGCAACCTGCATGAAGCAGCCTCAGGTCTGTGTCCGCCGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS TCA 72 bp | CATGCAGGTTGCTCTGTGCATGGGGCAGGCTCCCTGTaGTTAGCTCCTGGAAGCCTTGGCGGCAGGCAAATG | + |
|
Preference number: 6 (lower is better) Translates to: HAGCSVHGAGSL*LAPGSLGGRQM Trigger: CATTTGCCTGCCGCCAAGGCTTCCAGGAGCTAATCACAGGGAGCCTGCCCCATGCACAGAGCAACCTGCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS GCA 72 bp | ACCCAGCAACATTGCCAGCAGGTCCAGGTAATGCTCTaGAGCATCTTCTGCCCTCCCCGTCTGCAGGCATCG | + |
|
Preference number: 6 (lower is better) Translates to: TQQHCQQVQVML*SIFCPPRLQAS Trigger: CGATGCCTGCAGACGGGGAGGGCAGAAGATGCTGCAGAGCATTACCTGGACCTGCTGGCAATGTTGCTGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CCA 72 bp | TGGGGCAGGCTCCCTGTGATTAGCTCCTGGAAGCCTTaGCGGCAGGCAAATGCAGTCAGAAGGACATCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: WGRLPVISSWKP*RQANAVRRTSL Trigger: GAGGGATGTCCTTCTGACTGCATTTGCCTGCCGCCAAGGCTTCCAGGAGCTAATCACAGGGAGCCTGCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CAA 90 bp | ACTAACACGGACGGCGGACACAGACCTGAGGCTGCTTCATGCAGGTaGCTCTGTGCATGGGGCAGGCTCCCTGTGATTAGCTCCTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TNTDGGHRPEAASCR*LCAWGRLPVISSWK Trigger: CTTCCAGGAGCTAATCACAGGGAGCCTGCCCCATGCACAGAGCAACCTGCATGAAGCAGCCTCAGGTCTGTGTCCGCCGTCCGTGTTAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CAA 90 bp | AGGAGGTGGGTGGGGAGAACCTTGTCTCTGAGCCACCCAGCAACATaGCCAGCAGGTCCAGGTAATGCTCTGCAGCATCTTCTGCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RRWVGRTLSLSHPAT*PAGPGNALQHLLPS Trigger: GGAGGGCAGAAGATGCTGCAGAGCATTACCTGGACCTGCTGGCAATGTTGCTGGGTGGCTCAGAGACAAGGTTCTCCCCACCCACCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CAA 90 bp | AATGCTCTGCAGCATCTTCTGCCCTCCCCGTCTGCAGGCATCGACTaGCTAGCAGGTGCTTGGCCTGGCTCTGTGTGCCACAATGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: NALQHLLPSPSAGID*LAGAWPGSVCHNEE Trigger: CTCTTCATTGTGGCACACAGAGCCAGGCCAAGCACCTGCTAGCAAGTCGATGCCTGCAGACGGGGAGGGCAGAAGATGCTGCAGAGCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS TCA 72 bp | GCTAGCAGGTGCTTGGCCTGGCTCTGTGTGCCACAATaGAGAGGAGAGGCTGGGTCAGGTTGTGGAAGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: ASRCLAWLCVPQ*RGEAGSGCGSS Trigger: GCTACTTCCACAACCTGACCCAGCCTCTCCTCTTCATTGTGGCACACAGAGCCAGGCCAAGCACCTGCTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS TCA 72 bp | TATCCTGGCCACTGGCTACCCACTCCAGTCCACGACTaGTCAGAGCAGCCACTCGCAGCTGTTTCAGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: YPGHWLPTPVHD*SEQPLAAVSVP Trigger: TGGCACTGAAACAGCTGCGAGTGGCTGCTCTGATCAGTCGTGGACTGGAGTGGGTAGCCAGTGGCCAGGATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS GCA 72 bp | AGTTCCCTAAGCCCTTCCAGTGTGTCTTGGGCCGATTaGTGTCGCCTCAGAGAGGGACGAGAATCCCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: SSLSPSSVSWAD*CRLREGRESLV Trigger: CACCAGGGATTCTCGTCCCTCTCTGAGGCGACAGCAATCGGCCCAAGACACACTGGAAGGGCTTAGGGAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS GCA 72 bp | GCAGTCAGAAGGACATCCCTCAAACTCTCGGCATCCTaGAGAATCAGTGGGGCGGGTGACTCCTCAGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: AVRRTSLKLSAS*RISGAGDSSAG Trigger: TCCAGCTGAGGAGTCACCCGCCCCACTGATTCTGCAGGATGCCGAGAGTTTGAGGGATGTCCTTCTGACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CCA 72 bp | AGACCTGAGGCTGCTTCATGCAGGTTGCTCTGTGCATaGGGCAGGCTCCCTGTGATTAGCTCCTGGAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: RPEAASCRLLCA*GRLPVISSWKP Trigger: AGGCTTCCAGGAGCTAATCACAGGGAGCCTGCCCCATGCACAGAGCAACCTGCATGAAGCAGCCTCAGGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CAA 72 bp | GAGTTCCCTAAGCCCTTCCAGTGTGTCTTGGGCCGATaGCTGTCGCCTCAGAGAGGGACGAGAATCCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: EFPKPFQCVLGR*LSPQRGTRIPG Trigger: ACCAGGGATTCTCGTCCCTCTCTGAGGCGACAGCAATCGGCCCAAGACACACTGGAAGGGCTTAGGGAACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CAA 90 bp | AGTGAGGAGGAGTTCCCTAAGCCCTTCCAGTGTGTCTTGGGCCGATaGCTGTCGCCTCAGAGAGGGACGAGAATCCCTGGTGAGTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: SEEEFPKPFQCVLGR*LSPQRGTRIPGELL Trigger: AAGCAACTCACCAGGGATTCTCGTCCCTCTCTGAGGCGACAGCAATCGGCCCAAGACACACTGGAAGGGCTTAGGGAACTCCTCCTCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS GCA 72 bp | ATCGACTTGCTAGCAGGTGCTTGGCCTGGCTCTGTGTaGCACAATGAAGAGGAGAGGCTGGGTCAGGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: IDLLAGAWPGSV*HNEEERLGQVV Trigger: CACAACCTGACCCAGCCTCTCCTCTTCATTGTGGCACACAGAGCCAGGCCAAGCACCTGCTAGCAAGTCGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CAA 90 bp | GGCCGATTGCTGTCGCCTCAGAGAGGGACGAGAATCCCTGGTGAGTaGCTTAGCCTGTCTAACAAGCTGGTCGTTCTTTTCCCTCCACAG | + |
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Preference number: 6 (lower is better) Translates to: GRLLSPQRGTRIPGE*LSLSNKLVVLFPPQ Trigger: CTGTGGAGGGAAAAGAACGACCAGCTTGTTAGACAGGCTAAGCAACTCACCAGGGATTCTCGTCCCTCTCTGAGGCGACAGCAATCGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS GCA 72 bp | ACGACTGATCAGAGCAGCCACTCGCAGCTGTTTCAGTaGCACGTCAGACCTACACTTCTGCTCACAGTCGGA | + |
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Preference number: 6 (lower is better) Translates to: TTDQSSHSQLFQ*HVRPTLLLTVG Trigger: TCCGACTGTGAGCAGAAGTGTAGGTCTGACGTGGCACTGAAACAGCTGCGAGTGGCTGCTCTGATCAGTCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CCA 72 bp | TCACACACAGTCAAAGCGTCTAAGGCTCGGCCTGCCTaGATCAGTGCTGCTGCTGCCTCCAGACATAACTCT | + |
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Preference number: 6 (lower is better) Translates to: SHTVKASKARPA*ISAAAASRHNS Trigger: AGAGTTATGTCTGGAGGCAGCAGCAGCACTGATCCAGGCAGGCCGAGCCTTAGACGCTTTGACTGTGTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CAA 72 bp | GTGGGGAGAACCTTGTCTCTGAGCCACCCAGCAACATaGCCAGCAGGTCCAGGTAATGCTCTGCAGCATCTT | + |
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Preference number: 6 (lower is better) Translates to: VGRTLSLSHPAT*PAGPGNALQHL Trigger: AAGATGCTGCAGAGCATTACCTGGACCTGCTGGCAATGTTGCTGGGTGGCTCAGAGACAAGGTTCTCCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CAA 90 bp | TTGCCTGGGCATATCTGCACACTGAGGAGGAAGTCACTTAAGGCTTaGGTATCCTGGCCACTGGCTACCCACTCCAGTCCACGACTGATC | + |
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Preference number: 6 (lower is better) Translates to: LPGHICTLRRKSLKA*VSWPLATHSSPRLI Trigger: GATCAGTCGTGGACTGGAGTGGGTAGCCAGTGGCCAGGATACCAAAGCCTTAAGTGACTTCCTCCTCAGTGTGCAGATATGCCCAGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CCA 72 bp | ACACTGAGGAGGAAGTCACTTAAGGCTTTGGTATCCTaGCCACTGGCTACCCACTCCAGTCCACGACTGATC | + |
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Preference number: 6 (lower is better) Translates to: TLRRKSLKALVS*PLATHSSPRLI Trigger: GATCAGTCGTGGACTGGAGTGGGTAGCCAGTGGCCAGGATACCAAAGCCTTAAGTGACTTCCTCCTCAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CAA 90 bp | TTTTCCCACAAGGAGGACATTTTGGGAAGCAGAGACGAGGTACGGTaGAGCAGCTCCTCACACACAGTCAAAGCGTCTAAGGCTCGGCCT | + |
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Preference number: 6 (lower is better) Translates to: FSHKEDILGSRDEVR*SSSSHTVKASKARP Trigger: AGGCCGAGCCTTAGACGCTTTGACTGTGTGTGAGGAGCTGCTCAACCGTACCTCGTCTCTGCTTCCCAAAATGTCCTCCTTGTGGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CAA 90 bp | TTTCAGTGCCACGTCAGACCTACACTTCTGCTCACAGTCGGAGCCTaGTTCTTTGTCCTCAGGCAGGGTCCGAAAGAGCAGCTCAAGACA | + |
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Preference number: 6 (lower is better) Translates to: FQCHVRPTLLLTVGA*FFVLRQGPKEQLKT Trigger: TGTCTTGAGCTGCTCTTTCGGACCCTGCCTGAGGACAAAGAACAAGGCTCCGACTGTGAGCAGAAGTGTAGGTCTGACGTGGCACTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS TCA 72 bp | AGGAGCCATCTCTATTGCCTGGGCATATCTGCACACTaGGGAGGAAGTCACTTAAGGCTTTGGTATCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: RSHLYCLGISAH*GGSHLRLWYPG Trigger: GCCAGGATACCAAAGCCTTAAGTGACTTCCTCCTCAGTGTGCAGATATGCCCAGGCAATAGAGATGGCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS GCA 72 bp | TGTTCCCACTTTCAGGGCTTCAGTCAAGTACAACAGTaGTCTCTGTGGATTTCCCATCTTACGGAGACAGGC | + |
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Preference number: 6 (lower is better) Translates to: CSHFQGFSQVQQ*SLWISHLTETG Trigger: GCCTGTCTCCGTAAGATGGGAAATCCACAGAGAGCACTGTTGTACTTGACTGAAGCCCTGAAAGTGGGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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| CDS CCA 72 bp | CCAAACTCCTCAAGGAAGGCTTCGCGGTTAGGGGGATaGATCCAGCTCAAACAGGTTTCTAAATACAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: PNSSRKASRLGG*IQLKQVSKYSG Trigger: TCCACTGTATTTAGAAACCTGTTTGAGCTGGATCCATCCCCCTAACCGCGAAGCCTTCCTTGAGGAGTTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030165.5 |
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