Pregenerated sensors for FANCD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034023Ensembl transcript IDs: ENSMUST00000036340.12, ENSMUST00000123738.2, ENSMUST00000129462.3, ENSMUST00000204827.3
Found 278 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATaGATGCTACACTGGACTCCTGAACCAGGGACCTGGAGGTTAGAC | + |
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Preference number: 1 (lower is better) Translates to: HCTALQPSHVHPSQR*MLHWTPEPGTWRLD Trigger: GTCTAACCTCCAGGTCCCTGGTTCAGGAGTCCAGTGTAGCATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| 3UTR CCA 90 bp | CAGATTCTCTTGGCAAAAGGAGCAGTCAGCATATTCTCTAGCTTCTaGGAAAGATCTTCCAGCAAGAAGAGCAGCTCAGCAGGCCCCAGC | + |
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Preference number: 1 (lower is better) Translates to: QILLAKGAVSIFSSF*ERSSSKKSSSAGPS Trigger: GCTGGGGCCTGCTGAGCTGCTCTTCTTGCTGGAAGATCTTTCCCAGAAGCTAGAGAATATGCTGACTGCTCCTTTTGCCAAGAGAATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129462.3 |
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| 3UTR TCA 90 bp | AACCACACAGTGCACAATGTCCTGGACAGATCTCTGATGAAGATGTaGGAAGCCAATATTCTGCCTTCCTTTATTCTTAAAGCAGCAGAT | + |
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Preference number: 1 (lower is better) Translates to: NHTVHNVLDRSLMKM*EANILPSFILKAAD Trigger: ATCTGCTGCTTTAAGAATAAAGGAAGGCAGAATATTGGCTTCTCACATCTTCATCAGAGATCTGTCCAGGACATTGTGCACTGTGTGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129462.3 |
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| 3UTR-3UTR TCA 90 bp | AACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCCATCAAACAGGATGCTTCTaGCTAGAAAAACAGACATCT | + |
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Preference number: 2 (lower is better) Translates to: NPKAQLGHLHCTALQPSHQTGCF*LEKQTS Trigger: AGATGTCTGTTTTTCTAGTCAGAAGCATCCTGTTTG...ATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCAAACCCCAAAGAGATaGGAGTCTGTCAGAGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: LHCTALQPSHVHPSQRWMQTPKR*ESVRGE Trigger: CTCACCTCTGACAGACTCTCATCTCTTTGGGGTTTG...CATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| 3UTR-3UTR TCA 90 bp | TGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCCAAACCCCAAAGAGATaGGAGTCTGTCAGAGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: CTALHCSPAMFILVNDGCQTPKR*ESVRGE Trigger: CTCACCTCTGACAGACTCTCATCTCTTTGGGGTTTG...GCATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| 3UTR-3UTR TCA 90 bp | GAATGTTCTCCAGATGGTTACACATCGGGGTTAGCAGCTGAACCACACAGTGCAACGACCTCTGTAGCCTaGGGTGTGGAATGTGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: ECSPDGYTSGLAAEPHSATTSVA*GVECGE Trigger: TTCTCCACATTCCACACCTCAGGCTACAGAGGTCGT...TGCACTGTGTGGTTCAGCTGCTAACCCCGATGTGTAACCATCTGGAGAACATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129462.3 |
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| 3UTR-3UTR TCA 90 bp | TGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCATAAACACCCCTTCTTaGTGGACAAACAGGATGCTT | + |
|
Preference number: 2 (lower is better) Translates to: CTALHCSPAMFILVNDGCINTPS*WTNRML Trigger: AAGCATCCTGTTTGTCCATCAAGAAGGGGTGTTTAT...GCATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| 3UTR-3UTR CCA 90 bp | CCAGATGGTTACACATCGGGGTTAGCAGCTGAACCACACAGTGCACAATGTCCTAGCAGCAGATTCTCTTaGCAAAAGGAGCAGTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: PDGYTSGLAAEPHSAQCPSSRFS*QKEQSA Trigger: TGCTGACTGCTCCTTTTGCCAAGAGAATCTGCTGCT...AGGACATTGTGCACTGTGTGGTTCAGCTGCTAACCCCGATGTGTAACCATCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129462.3 |
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| 3UTR-3UTR TCA 90 bp | TGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCAGAAAAACAGACATCTaGCTTCAAACCCCAAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: CTALHCSPAMFILVNDGCRKTDI*LQTPKR Trigger: TCTCTTTGGGGTTTGAAGTCAGATGTCTGTTTTTCT...GCATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| 3UTR-3UTR TCA 90 bp | CCAGATGGTTACACATCGGGGTTAGCAGCTGAACCACACAGTGCACAATGTCCTTCTCTGATGAAGATGTaGGAAGCCAATATTCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: PDGYTSGLAAEPHSAQCPSLMKM*EANILP Trigger: AGGCAGAATATTGGCTTCTCACATCTTCATCAGAGA...AGGACATTGTGCACTGTGTGGTTCAGCTGCTAACCCCGATGTGTAACCATCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129462.3 |
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| 3UTR-3UTR CCA 90 bp | CAAAAATTAAATAATCTTAATGGCACAGCGAGGAAGAGCCTGGCAGCATCTCTGCTAGAGTTTGAACCCTaGAACCCACATGGTGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: QKLNNLNGTARKSLAASLLEFEP*NPHGGR Trigger: CCTTCCACCATGTGGGTTCCAGGGTTCAAACTCTAG...CAGAGATGCTGCCAGGCTCTTCCTCGCTGTGCCATTAAGATTATTTAATTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036340.12 |
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| 3UTR-3UTR CCA 90 bp | CAGCACCTAAGCACTGAAAGAAGTTGTGAATGTTCTCCAGATGGTTACACATCGCTGAGGTGTGGAATGTaGAGAACAACTTCAATCATG | + |
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Preference number: 2 (lower is better) Translates to: QHLSTERSCECSPDGYTSLRCGM*RTTSIM Trigger: CATGATTGAAGTTGTTCTCCACATTCCACACCTCAG...CGATGTGTAACCATCTGGAGAACATTCACAACTTCTTTCAGTGCTTAGGTGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129462.3 |
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| 3UTR-3UTR TCA 90 bp | AGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACAGAAAAACAGACATCTaGCTTCAAACCCCAAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: RQPVKPTGELNKHPFLMDRKTDI*LQTPKR Trigger: TCTCTTTGGGGTTTGAAGTCAGATGTCTGTTTTTCT...GTCCATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| 3UTR CAA 90 bp | AAGCCAATATTCTGCCTTCCTTTATTCTTAAAGCAGCAGATTCTCTaGGCAAAAGGAGCAGTCAGCATATTCTCTAGCTTCTGGGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: KPIFCLPLFLKQQIL*AKGAVSIFSSFWER Trigger: TCTTTCCCAGAAGCTAGAGAATATGCTGACTGCTCCTTTTGCCAAGAGAATCTGCTGCTTTAAGAATAAAGGAAGGCAGAATATTGGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129462.3 |
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| 3UTR GCA 72 bp | TTTCAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTaGACTGCACTGCAGCCCAGCCATGTTCATCCTAGT | + |
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Preference number: 3 (lower is better) Translates to: FQNPKAQLGHLH*TALQPSHVHPS Trigger: ACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| 3UTR CCA 72 bp | GCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATaGATGCTACACTGGACTCCTGAACCAGGGACCTGG | + |
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Preference number: 3 (lower is better) Translates to: ALQPSHVHPSQR*MLHWTPEPGTW Trigger: CCAGGTCCCTGGTTCAGGAGTCCAGTGTAGCATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| 3UTR GCA 72 bp | TGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATaGTACACTGGACTCCTGAACCAGGGACCTGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: CSPAMFILVNDG*YTGLLNQGPGG Trigger: ACCTCCAGGTCCCTGGTTCAGGAGTCCAGTGTAGCATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| 3UTR TCA 72 bp | TTAATGGCACAGCGAGGAAGAGCCTGGCAGCATCTCTaGGACTGGGCTTCCTGGCAGAAGACAGAAGAATCC | + |
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Preference number: 3 (lower is better) Translates to: LMAQRGRAWQHL*DWASWQKTEES Trigger: GGATTCTTCTGTCTTCTGCCAGGAAGCCCAGTCTCAGAGATGCTGCCAGGCTCTTCCTCGCTGTGCCATTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036340.12 |
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| 3UTR-3UTR CAA 90 bp | CACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGAATAAACACCCCTTCTaGATGGACAAACAGGATGCT | + |
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Preference number: 3 (lower is better) Translates to: HLHCTALQPSHVHPSQRWNKHPF*MDKQDA Trigger: AGCATCCTGTTTGTCCATCAAGAAGGGGTGTTTATT...CCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| 3UTR TCA 72 bp | ATGTTCTCCAGATGGTTACACATCGGGGTTAGCAGCTaGACCACACAGTGCACAATGTCCTGGACAGATCTC | + |
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Preference number: 3 (lower is better) Translates to: MFSRWLHIGVSS*TTQCTMSWTDL Trigger: GAGATCTGTCCAGGACATTGTGCACTGTGTGGTTCAGCTGCTAACCCCGATGTGTAACCATCTGGAGAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129462.3 |
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| 3UTR TCA 72 bp | GTGCACAATGTCCTGGACAGATCTCTGATGAAGATGTaGGAAGCCAATATTCTGCCTTCCTTTATTCTTAAA | + |
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Preference number: 3 (lower is better) Translates to: VHNVLDRSLMKM*EANILPSFILK Trigger: TTTAAGAATAAAGGAAGGCAGAATATTGGCTTCTCACATCTTCATCAGAGATCTGTCCAGGACATTGTGCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129462.3 |
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| CDS-3UTR TCA 90 bp | CAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCACAGCAGGCAGTTCCTaGGACTCTCACTGTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: QNPKAQLGHLHCTALQPSTAGSS*DSHCPQ Trigger: CTGAGGACAGTGAGAGTCTCAGGAACTGCCTGCTGT...GCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR TCA 90 bp | AACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCCATCGTCTTTCGGAGCACTaGCCAGTTCTGGGACACCAA | + |
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Preference number: 4 (lower is better) Translates to: NPKAQLGHLHCTALQPSHRLSEH*PVLGHQ Trigger: TTGGTGTCCCAGAACTGGTCAGTGCTCCGAAAGACG...ATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR GCA 90 bp | CAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCGGACAGATGACAGCTTaGCCATCACCAACTGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: QNPKAQLGHLHCTALQPSGQMTA*PSPTGG Trigger: TCCGCCAGTTGGTGATGGGCAAGCTGTCATCTGTCC...GCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR TCA 90 bp | CAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCACTCTGCATTGCTCTCTaGGGAAGAGGGATCCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: QGPARAPALHCTAAQPCSLCIAL*GRGILG Trigger: TCCCAGGATCCCTCTTCCTCAGAGAGCAATGCAGAG...TGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR GCA 90 bp | CAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCAACCTCAAGGGCTGAGTaGAGGAGGCGGTGCTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: QGPARAPALHCTAAQPCSTSRAE*RRRCFD Trigger: ATCAAAGCACCGCCTCCTGCACTCAGCCCTTGAGGT...TGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR CCA 90 bp | AACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCCATCTCAGCAGCCGGAAATaGGAAGCCAGGCACAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: NPKAQLGHLHCTALQPSHLSSRK*EARHKE Trigger: TTCTTTGTGCCTGGCTTCCCATTTCCGGCTGCTGAG...ATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR TCA 90 bp | AACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCCATTGCTTCCTCAAGGCCTaGAAGAGCTTCCTTTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: NPKAQLGHLHCTALQPSHCFLKA*KSFLWK Trigger: CTTCCAAAGGAAGCTCTTTCAGGCCTTGAGGAAGCA...ATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR TCA 90 bp | ACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGAGAGGACCTCAAGGGCTaGGTGCAGGAGGCGGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: TCTALHCSPAMFILVNDGEDLKG*VQEAVL Trigger: AAGCACCGCCTCCTGCACTCAGCCCTTGAGGTCCTC...TCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR TCA 90 bp | CACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGGCTGCTGTGCCAGCCTaGAGACCCTTCACCGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: HLHCTALQPSHVHPSQRWAAVPA*RPFTVF Trigger: GAAGACGGTGAAGGGTCTTCAGGCTGGCACAGCAGC...CCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR GCA 90 bp | CAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCAAGAAGTCACCTGTGTaGGCTGCTCACTGCTCACAT | + |
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Preference number: 4 (lower is better) Translates to: QNPKAQLGHLHCTALQPSKKSPV*AAHCSH Trigger: ATGTGAGCAGTGAGCAGCGCACACAGGTGACTTCTT...GCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR CCA 90 bp | CAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCACCAACTGGCGGATCTTaGACAGGAAGTTGGGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: QGPARAPALHCTAAQPCSPTGGS*TGSWGQ Trigger: TTGACCCCAACTTCCTGTCCAAGATCCGCCAGTTGG...TGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR GCA 90 bp | AACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCCATCTCGTGATGAAGTCATaGTGTAAGTTCACGGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: NPKAQLGHLHCTALQPSHLVMKS*CKFTGA Trigger: TGCTCCCGTGAACTTACAGCATGACTTCATCACGAG...ATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR CCA 90 bp | CAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCACTTCTTTGCCAGCTTaGAAAGGGGCATGGTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: QNPKAQLGHLHCTALQPSTSLPA*KGAWFW Trigger: CCAAAACCATGCCCCTTTCCAAGCTGGCAAAGAAGT...GCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR CCA 90 bp | CAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCAGCAGCAGATTCTCTTaGCAAAAGGAGCAGTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QNPKAQLGHLHCTALQPSSSRFS*QKEQSA Trigger: TGCTGACTGCTCCTTTTGCCAAGAGAATCTGCTGCT...GCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR CCA 90 bp | CAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCGACCACACTGGAAACTaGGAACACTATGGTGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: QNPKAQLGHLHCTALQPSDHTGN*EHYGGS Trigger: ACTTCCACCATAGTGTTCCCAGTTTCCAGTGTGGTC...GCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR TCA 90 bp | CAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCGCACAAAGAAGACATTaGTCTCTGGCTCGATTCTTG | + |
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Preference number: 4 (lower is better) Translates to: QNPKAQLGHLHCTALQPSAQRRH*SLARFL Trigger: CAAGAATCGAGCCAGAGATCAATGTCTTCTTTGTGC...GCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR TCA 90 bp | AACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCCATGAACATAGTCTGGGATaGCTGCCAAGTACTTCTCTA | + |
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Preference number: 4 (lower is better) Translates to: NPKAQLGHLHCTALQPSHEHSLG*LPSTSL Trigger: TAGAGAAGTACTTGGCAGTCATCCCAGACTATGTTC...ATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR TCA 90 bp | AGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCTACACTGGACTCCTGAACGAGGACCTCAAGGGCTaGGTGCAGGAGGCGGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: SPAMFILVNDGCYTGLLNEDLKG*VQEAVL Trigger: AAGCACCGCCTCCTGCACTCAGCCCTTGAGGTCCTC...GTTCAGGAGTCCAGTGTAGCATCCATCGTTGACTAGGATGAACATGGCTGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR TCA 90 bp | CAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCACACGGAAGAATATaGCAAAGGTGTGCCTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: QGPARAPALHCTAAQPCSSHGRI*QRCAWS Trigger: TGACCAGGCACACCTTTGTCATATTCTTCCGTGTGA...TGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR GCA 90 bp | TGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCCTGGCTTCCTCATCCTaGAGGCGCTCACAAGACAGC | + |
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Preference number: 4 (lower is better) Translates to: CTALHCSPAMFILVNDGCLASSS*RRSQDS Trigger: GCTGTCTTGTGAGCGCCTGCAGGATGAGGAAGCCAG...GCATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR GCA 90 bp | CTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCTGGCTTCCTCATCCTaGAGGCGCTCACAAGACAGC | + |
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Preference number: 4 (lower is better) Translates to: LHCTALQPSHVHPSQRWMLASSS*RRSQDS Trigger: GCTGTCTTGTGAGCGCCTGCAGGATGAGGAAGCCAG...CATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR CCA 90 bp | TCAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGACTTCTTTGCCAGCTTaGAAAGGGGCATGGTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: SKPQGPARAPALHCTAAQTSLPA*KGAWFW Trigger: CCAAAACCATGCCCCTTTCCAAGCTGGCAAAGAAGT...CTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR CCA 90 bp | TCAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGAGCAGCAGATTCTCTTaGCAAAAGGAGCAGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKPQGPARAPALHCTAAQSSRFS*QKEQSA Trigger: TGCTGACTGCTCCTTTTGCCAAGAGAATCTGCTGCT...CTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | AACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCCATGCTGAAGTCGAGGAGTaGCATACATTGCTTCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NPKAQLGHLHCTALQPSHAEVEE*HTLLQK Trigger: TTTCTGAAGCAATGTATGCCACTCCTCGACTTCAGC...ATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | TCAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGTCCCCAGAAGTAGCTTaGTCAGACTCTTGGAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SKPQGPARAPALHCTAAQSPEVA*SDSWSK Trigger: TTTACTCCAAGAGTCTGATCAAGCTACTTCTGGGGA...CTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | AACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCCATTCCAGCCATTTTAGTTaGTTGATAATGAGTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NPKAQLGHLHCTALQPSHSSHFS*LIMSLA Trigger: GGCCAGACTCATTATCAATCAACTAAAATGGCTGGA...ATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | CTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCGTCTTTCGGAGCACTaGCCAGTTCTGGGACACCAA | + |
|
Preference number: 4 (lower is better) Translates to: LHCTALQPSHVHPSQRWMRLSEH*PVLGHQ Trigger: TTGGTGTCCCAGAACTGGTCAGTGCTCCGAAAGACG...CATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | TCAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGGTAAGTCTCGGTTTTTaGGAGTACCCAACCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SKPQGPARAPALHCTAAQVSLGF*EYPTRK Trigger: CTTTCTGGTTGGGTACTCTCAAAAACCGAGACTTAC...CTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | TCAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGATTGTGAGACTTCTTTaGCAGCTTGGAAAGGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SKPQGPARAPALHCTAAQIVRLL*QLGKGH Trigger: ATGCCCCTTTCCAAGCTGGCAAAGAAGTCTCACAAT...CTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | ACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGAGTCAGGGAAGTATTCTaGACCAGCAGCTCGCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TCTALHCSPAMFILVNDGVREVF*TSSSPS Trigger: GCTTGGCGAGCTGCTGGTGCAGAATACTTCCCTGAC...TCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | TGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCGTCAGGGAAGTATTCTaGACCAGCAGCTCGCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CTALHCSPAMFILVNDGCVREVF*TSSSPS Trigger: GCTTGGCGAGCTGCTGGTGCAGAATACTTCCCTGAC...GCATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | CAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCGCAGCTGTTCTTGAATaGAGTCTGACTGAATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QNPKAQLGHLHCTALQPSAAVLE*SLTESC Trigger: ACAAGATTCAGTCAGACTGCATTCAAGAACAGCTGC...GCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | ACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGAGCGAATCTGCTGCTGTaGCAGCCTGAAGACCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TCTALHCSPAMFILVNDGANLLL*QPEDPS Trigger: TGAAGGGTCTTCAGGCTGGCACAGCAGCAGATTCGC...TCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | CTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGAACCTGCTGCGAATCTaGTGCTGTGCCAGCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LHCTALQPSHVHPSQRWMNLLRI*CCASLK Trigger: CTTCAGGCTGGCACAGCAGCAGATTCGCAGCAGGTT...CATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | AACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCCATGGTCAAGTCGGAGACTaGAAAAGACATCCAAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: NPKAQLGHLHCTALQPSHGQVGD*KRHPKL Trigger: CAATTTTGGATGTCTTTTCCAGTCTCCGACTTGACC...ATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | CACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGTCGTCCTGGATATaGTTGCTGGTTCCGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HLHCTALQPSHVHPSQRWMSSWI*LLVPGC Trigger: ACAGCCCGGAACCAGCAACCATATCCAGGACGACAT...CCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | TCAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCCACTCCAAGGTTTTTaGAGCCAACTTCCTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SKPQGPARAPALHCTAAQPLQGF*SQLPFL Trigger: CAAGAAAGGAAGTTGGCTCCAAAAACCTTGGAGTGG...CTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | TCAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGAGCACATCATGCAGGTaGTCATTAAAAGTGGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SKPQGPARAPALHCTAAQSTSCR*SLKVGF Trigger: GAACCCCACTTTTAATGACCACCTGCATGATGTGCT...CTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | CAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCTTTAAGAGTGAGTCCTaGAGCCTTAAGAAGCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: QNPKAQLGHLHCTALQPSFKSES*SLKKLY Trigger: GTAAAGCTTCTTAAGGCTTCAGGACTCACTCTTAAA...GCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | CACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGTGCTTCCTCAAGGCCTaGAAGAGCTTCCTTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLHCTALQPSHVHPSQRWCFLKA*KSFLWK Trigger: CTTCCAAAGGAAGCTCTTTCAGGCCTTGAGGAAGCA...CCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | CAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCTTATCACTGTTCTCTTaGTTTCCTGAAGAGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QNPKAQLGHLHCTALQPSLSLFS*FPEELA Trigger: AGCAAGCTCTTCAGGAAATCAAGAGAACAGTGATAA...GCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | ACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGAGGACACCAACACCAGTaGTCTCCTCTATGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TCTALHCSPAMFILVNDGGHQHQ*SPLWPS Trigger: TGAAGGCCATAGAGGAGATCACTGGTGTTGGTGTCC...TCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | TGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCGGACACCAACACCAGTaGTCTCCTCTATGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CTALHCSPAMFILVNDGCGHQHQ*SPLWPS Trigger: TGAAGGCCATAGAGGAGATCACTGGTGTTGGTGTCC...GCATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | AACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCCATAAGGAGAGTGCTCAGTaGAAGAATGAACTAGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NPKAQLGHLHCTALQPSHKESAQ*KNELVV Trigger: TACAACTAGTTCATTCTTGCACTGAGCACTCTCCTT...ATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | AACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCCATTCTGTAGCTTCAGTGTaGATTTCAGTGTCTAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: NPKAQLGHLHCTALQPSHSVASV*ISVSKM Trigger: CATCTTAGACACTGAAATGCACACTGAAGCTACAGA...ATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | CTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGTCTCGCCTTGTCATCTaGACTGAGATGCTCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LHCTALQPSHVHPSQRWMSRLVI*TEMLST Trigger: GGTGCTGAGCATCTCAGTGCAGATGACAAGGCGAGA...CATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | CACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGTGGTCCTGTTCCATCTaGTTTAGTCGGTTCGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HLHCTALQPSHVHPSQRWWSCSI*FSRFER Trigger: CCTCTCGAACCGACTAAAGCAGATGGAACAGGACCA...CCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | TCAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGGGTCAAGTCGGAGACTaGAAAAGACATCCAAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: SKPQGPARAPALHCTAAQGQVGD*KRHPKL Trigger: CAATTTTGGATGTCTTTTCCAGTCTCCGACTTGACC...CTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | CACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGTGGAAAGTCACCCTCTaGAGCAGCACAGAAGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: HLHCTALQPSHVHPSQRWWKVTL*SSTEVY Trigger: GTAGACTTCTGTGCTGCTCCAGAGGGTGACTTTCCA...CCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | ACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGACTCAGCAGCCGGAAATaGGAAGCCAGGCACAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TCTALHCSPAMFILVNDGLSSRK*EARHKE Trigger: TTCTTTGTGCCTGGCTTCCCATTTCCGGCTGCTGAG...TCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | AGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCTACACTGGACTCCTGAACACCTCAAGGGCTGAGTaGAGGAGGCGGTGCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SPAMFILVNDGCYTGLLNTSRAE*RRRCFD Trigger: ATCAAAGCACCGCCTCCTGCACTCAGCCCTTGAGGT...GTTCAGGAGTCCAGTGTAGCATCCATCGTTGACTAGGATGAACATGGCTGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | CTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGACATTGCTTCAGAAATaGCTCCACAAAGCGACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LHCTALQPSHVHPSQRWMTLLQK*LHKATA Trigger: GGCCGTCGCTTTGTGGAGGCATTTCTGAAGCAATGT...CATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | CAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCAACCACAAAGGCATCTTaGAAATCATTGAAGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QGPARAPALHCTAAQPCSTTKAS*KSLKMV Trigger: GACCATCTTCAATGATTTCCAAGATGCCTTTGTGGT...TGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | ACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGGAAAGTCACCCTCTaGAGCAGCACAGAAGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: TCTALHCSPAMFILVNDGWKVTL*SSTEVY Trigger: GTAGACTTCTGTGCTGCTCCAGAGGGTGACTTTCCA...TCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | CTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCGCTTTCACAGGAAATaGAAAGTCACCCTCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHCTALQPSHVHPSQRWMRFHRK*KVTLWS Trigger: GCTCCAGAGGGTGACTTTCCATTTCCTGTGAAAGCG...CATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | CAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCAATATTCTCTAGCTTCTaGGAAAGATCTTCCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QGPARAPALHCTAAQPCSIFSSF*ERSSSK Trigger: CTTGCTGGAAGATCTTTCCCAGAAGCTAGAGAATAT...TGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | ACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGAAGCACTGACCAGTTCTaGGACACCAACACCAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TCTALHCSPAMFILVNDGSTDQF*DTNTSD Trigger: ATCACTGGTGTTGGTGTCCCAGAACTGGTCAGTGCT...TCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | TCAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGGTGTCTGTTACAGAATaGAGAAGGAACTTTACAATC | + |
|
Preference number: 4 (lower is better) Translates to: SKPQGPARAPALHCTAAQVSVTE*RRNFTI Trigger: GATTGTAAAGTTCCTTCTTCATTCTGTAACAGACAC...CTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | ACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGAGGAAGCCTGAATTCGTaGCGGCAAAATAAACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TCTALHCSPAMFILVNDGGSLNS*RQNKLL Trigger: CAGCAGTTTATTTTGCCGTCACGAATTCAGGCTTCC...TCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | CACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGTCTTGGAGTAAAATGTaGCCATGCTGGCTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HLHCTALQPSHVHPSQRWSWSKM*PCWLPH Trigger: ATGAGGAAGCCAGCATGGGCACATTTTACTCCAAGA...CCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | TGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCTTCCCCACATTAGCATaGTGGGAATCCCCTAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: CTALHCSPAMFILVNDGCFPTLA*WESPRI Trigger: AATCCTAGGGGATTCCCAGCATGCTAATGTGGGGAA...GCATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | AGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCTACACTGGACTCCTGAACTTCCCCATCCTCTGTTaGTCTGTTCCTGGAGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPAMFILVNDGCYTGLLNFPILC*SVPGDV Trigger: CACGTCTCCAGGAACAGAGCAACAGAGGATGGGGAA...GTTCAGGAGTCCAGTGTAGCATCCATCGTTGACTAGGATGAACATGGCTGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | AACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCCATCAGCAAAAGAATAGATaGGCAAATATCCTTAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NPKAQLGHLHCTALQPSHQQKNR*ANILKN Trigger: GTTCTTAAGGATATTTGCCCATCTATTCTTTTGCTG...ATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | TGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCTCCCCAGAAGTAGCTTaGTCAGACTCTTGGAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: CTALHCSPAMFILVNDGCSPEVA*SDSWSK Trigger: TTTACTCCAAGAGTCTGATCAAGCTACTTCTGGGGA...GCATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | CTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGGCACAAAGAAGACATTaGTCTCTGGCTCGATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LHCTALQPSHVHPSQRWMAQRRH*SLARFL Trigger: CAAGAATCGAGCCAGAGATCAATGTCTTCTTTGTGC...CATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | CTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGGAACATAGTCTGGGATaGCTGCCAAGTACTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LHCTALQPSHVHPSQRWMEHSLG*LPSTSL Trigger: TAGAGAAGTACTTGGCAGTCATCCCAGACTATGTTC...CATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | CTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCCACTCCAAGGTTTTTaGAGCCAACTTCCTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LHCTALQPSHVHPSQRWMPLQGF*SQLPFL Trigger: CAAGAAAGGAAGTTGGCTCCAAAAACCTTGGAGTGG...CATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | ACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGAAGCACATCATGCAGGTaGTCATTAAAAGTGGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TCTALHCSPAMFILVNDGSTSCR*SLKVGF Trigger: GAACCCCACTTTTAATGACCACCTGCATGATGTGCT...TCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | TGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCGCTGAAGTCGAGGAGTaGCATACATTGCTTCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CTALHCSPAMFILVNDGCAEVEE*HTLLQK Trigger: TTTCTGAAGCAATGTATGCCACTCCTCGACTTCAGC...GCATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | CACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGTTTAAGAGTGAGTCCTaGAGCCTTAAGAAGCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: HLHCTALQPSHVHPSQRWFKSES*SLKKLY Trigger: GTAAAGCTTCTTAAGGCTTCAGGACTCACTCTTAAA...CCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | AAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACAAACAGGATGCTGCTGCTGTGCCAGCCTaGAGACCCTTCACCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPTGELNKHPFLMDKQDAAAVPA*RPFTVF Trigger: GAAGACGGTGAAGGGTCTTCAGGCTGGCACAGCAGC...AGCATCCTGTTTGTCCATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | AGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCTACACTGGACTCCTGAACCTCGTGATGAAGTCATaGTGTAAGTTCACGGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPAMFILVNDGCYTGLLNLVMKS*CKFTGA Trigger: TGCTCCCGTGAACTTACAGCATGACTTCATCACGAG...GTTCAGGAGTCCAGTGTAGCATCCATCGTTGACTAGGATGAACATGGCTGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | CTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGGCAGCTGTTCTTGAATaGAGTCTGACTGAATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LHCTALQPSHVHPSQRWMAAVLE*SLTESC Trigger: ACAAGATTCAGTCAGACTGCATTCAAGAACAGCTGC...CATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | CTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGGCCAACTTCCTTTCTTaGATCAGGTTGGCAAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHCTALQPSHVHPSQRWMANFLS*IRLANS Trigger: TGAATTTGCCAACCTGATCCAAGAAAGGAAGTTGGC...CATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | ACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATTATCACTGTTCTCTTaGTTTCCTGAAGAGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TCTALHCSPAMFILVNDGLSLFS*FPEELA Trigger: AGCAAGCTCTTCAGGAAATCAAGAGAACAGTGATAA...TCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | CTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGTTCTTGAATGCAGTCTaGCTGAATCTTGTTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHCTALQPSHVHPSQRWMFLNAV*LNLVSQ Trigger: CTGAGAAACAAGATTCAGTCAGACTGCATTCAAGAA...CATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | ACATATCTAATACCACAACAGCCAGGACTATGTAAAGAGACCCTGACACAGACCGGACAGATGACAGCTTaGCCATCACCAACTGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TYLIPQQPGLCKETLTQTGQMTA*PSPTGG Trigger: TCCGCCAGTTGGTGATGGGCAAGCTGTCATCTGTCC...GGTCTGTGTCAGGGTCTCTTTACATAGTCCTGGCTGTTGTGGTATTAGATATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036340.12 |
||
| CDS-3UTR GCA 90 bp | TGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCAAGGAGAGTGCTCAGTaGAAGAATGAACTAGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CTALHCSPAMFILVNDGCKESAQ*KNELVV Trigger: TACAACTAGTTCATTCTTGCACTGAGCACTCTCCTT...GCATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | CTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGTCTGTAGCTTCAGTGTaGATTTCAGTGTCTAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LHCTALQPSHVHPSQRWMSVASV*ISVSKM Trigger: CATCTTAGACACTGAAATGCACACTGAAGCTACAGA...CATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | AGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACGCGAATCTGCTGCTGTaGCAGCCTGAAGACCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RQPVKPTGELNKHPFLMDANLLL*QPEDPS Trigger: TGAAGGGTCTTCAGGCTGGCACAGCAGCAGATTCGC...GTCCATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | GAGGTTAGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGAACCTGCTGCGAATCTaGTGCTGTGCCAGCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EVRQPVKPTGELNKHPFLNLLRI*CCASLK Trigger: CTTCAGGCTGGCACAGCAGCAGATTCGCAGCAGGTT...CAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCTAACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | AGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCTACACTGGACTCCTGAACAGGAGTGGCATACATTaGTTCAGAAATGCCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SPAMFILVNDGCYTGLLNRSGIH*FRNAST Trigger: TGTGGAGGCATTTCTGAAGCAATGTATGCCACTCCT...GTTCAGGAGTCCAGTGTAGCATCCATCGTTGACTAGGATGAACATGGCTGGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | AGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCTACACTGGACTCCTGAACTCCAGCCATTTTAGTTaGTTGATAATGAGTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SPAMFILVNDGCYTGLLNSSHFS*LIMSLA Trigger: GGCCAGACTCATTATCAATCAACTAAAATGGCTGGA...GTTCAGGAGTCCAGTGTAGCATCCATCGTTGACTAGGATGAACATGGCTGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | AAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACAAACAGGATGCTCTCTGCATTGCTCTCTaGGGAAGAGGGATCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KPTGELNKHPFLMDKQDALCIAL*GRGILG Trigger: TCCCAGGATCCCTCTTCCTCAGAGAGCAATGCAGAG...AGCATCCTGTTTGTCCATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | AGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACTTCCCCATCCTCTGTTaGTCTGTTCCTGGAGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: RQPVKPTGELNKHPFLMDFPILC*SVPGDV Trigger: CACGTCTCCAGGAACAGAGCAACAGAGGATGGGGAA...GTCCATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | AGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACTCTTGGACAGGAAGTTaGGGTCAAGTCGGAGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RQPVKPTGELNKHPFLMDSWTGS*GQVGDW Trigger: CCAGTCTCCGACTTGACCCCAACTTCCTGTCCAAGA...GTCCATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | AGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCTACACTGGACTCCTGAACCTTTCATCACTGTCCTaGTCCTTCTGTTCATCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SPAMFILVNDGCYTGLLNLSSLS*SFCSSL Trigger: AAGTGATGAACAGAAGGACCAGGACAGTGATGAAAG...GTTCAGGAGTCCAGTGTAGCATCCATCGTTGACTAGGATGAACATGGCTGGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | GGGTTAGCAGCTGAACCACACAGTGCACAATGTCCTGGACAGATCTCTGATGAATATCTTCAGTGTATTTaGTGCTCGTCTCTCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: GLAAEPHSAQCPGQISDEYLQCI*CSSLPL Trigger: CAATGGGAGAGACGAGCATCAAATACACTGAAGATA...TTCATCAGAGATCTGTCCAGGACATTGTGCACTGTGTGGTTCAGCTGCTAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129462.3 |
||
| CDS-3UTR GCA 90 bp | AAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACAAACAGGATGCTTCTCGCCTTGTCATCTaGACTGAGATGCTCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: KPTGELNKHPFLMDKQDASRLVI*TEMLST Trigger: GGTGCTGAGCATCTCAGTGCAGATGACAAGGCGAGA...AGCATCCTGTTTGTCCATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | GAGGTTAGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGTGGTCCTGTTCCATCTaGTTTAGTCGGTTCGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EVRQPVKPTGELNKHPFLWSCSI*FSRFER Trigger: CCTCTCGAACCGACTAAAGCAGATGGAACAGGACCA...CAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCTAACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | AGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACGCTTGGAAAGGGGCATaGTTTTGGAGGCATCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RQPVKPTGELNKHPFLMDAWKGA*FWRHLL Trigger: CAGAAGATGCCTCCAAAACCATGCCCCTTTCCAAGC...GTCCATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | AAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACAAACAGGATGCTTCTTGGACAGGAAGTTaGGGTCAAGTCGGAGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: KPTGELNKHPFLMDKQDASWTGS*GQVGDW Trigger: CCAGTCTCCGACTTGACCCCAACTTCCTGTCCAAGA...AGCATCCTGTTTGTCCATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | TGGTCAACATATCTAATACCACAACAGCCAGGACTATGTAAAGAGACCCTGACACCAACTGGCGGATCTTaGACAGGAAGTTGGGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: WSTYLIPQQPGLCKETLTPTGGS*TGSWGQ Trigger: TTGACCCCAACTTCCTGTCCAAGATCCGCCAGTTGG...TGTCAGGGTCTCTTTACATAGTCCTGGCTGTTGTGGTATTAGATATGTTGACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036340.12 |
||
| CDS-3UTR CCA 90 bp | TGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCCAGCAAAAGAATAGATaGGCAAATATCCTTAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: CTALHCSPAMFILVNDGCQQKNR*ANILKN Trigger: GTTCTTAAGGATATTTGCCCATCTATTCTTTTGCTG...GCATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | CAAAAATTAAATAATCTTAATGGCACAGCGAGGAAGAGCCTGGCAGCATCTCTGATGTCGTCCTGGATATaGTTGCTGGTTCCGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QKLNNLNGTARKSLAASLMSSWI*LLVPGC Trigger: ACAGCCCGGAACCAGCAACCATATCCAGGACGACAT...CAGAGATGCTGCCAGGCTCTTCCTCGCTGTGCCATTAAGATTATTTAATTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036340.12 |
||
| CDS-3UTR CCA 90 bp | GAGGTTAGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGCGCTTTCACAGGAAATaGAAAGTCACCCTCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EVRQPVKPTGELNKHPFLRFHRK*KVTLWS Trigger: GCTCCAGAGGGTGACTTTCCATTTCCTGTGAAAGCG...CAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCTAACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | ACATATCTAATACCACAACAGCCAGGACTATGTAAAGAGACCCTGACACAGACCGGAAGCCTGAATTCGTaGCGGCAAAATAAACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TYLIPQQPGLCKETLTQTGSLNS*RQNKLL Trigger: CAGCAGTTTATTTTGCCGTCACGAATTCAGGCTTCC...GGTCTGTGTCAGGGTCTCTTTACATAGTCCTGGCTGTTGTGGTATTAGATATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036340.12 |
||
| CDS-3UTR TCA 90 bp | ACATATCTAATACCACAACAGCCAGGACTATGTAAAGAGACCCTGACACAGACCTCACACGGAAGAATATaGCAAAGGTGTGCCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TYLIPQQPGLCKETLTQTSHGRI*QRCAWS Trigger: TGACCAGGCACACCTTTGTCATATTCTTCCGTGTGA...GGTCTGTGTCAGGGTCTCTTTACATAGTCCTGGCTGTTGTGGTATTAGATATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036340.12 |
||
| CDS-3UTR GCA 90 bp | AGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACAGTAAAATGTGCCCATaGTGGCTTCCTCATCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RQPVKPTGELNKHPFLMDSKMCP*WLPHPA Trigger: TGCAGGATGAGGAAGCCAGCATGGGCACATTTTACT...GTCCATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | AAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACAAACAGGATGCTAAGAAGTCACCTGTGTaGGCTGCTCACTGCTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: KPTGELNKHPFLMDKQDAKKSPV*AAHCSH Trigger: ATGTGAGCAGTGAGCAGCGCACACAGGTGACTTCTT...AGCATCCTGTTTGTCCATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | GTTAGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGACATTGCTTCAGAAATaGCTCCACAAAGCGACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VRQPVKPTGELNKHPFLMTLLQK*LHKATA Trigger: GGCCGTCGCTTTGTGGAGGCATTTCTGAAGCAATGT...CATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | GTTAGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGCTTGGAAAGGGGCATaGTTTTGGAGGCATCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VRQPVKPTGELNKHPFLMAWKGA*FWRHLL Trigger: CAGAAGATGCCTCCAAAACCATGCCCCTTTCCAAGC...CATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | GTTAGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGAGCACTGACCAGTTCTaGGACACCAACACCAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VRQPVKPTGELNKHPFLMSTDQF*DTNTSD Trigger: ATCACTGGTGTTGGTGTCCCAGAACTGGTCAGTGCT...CATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | AGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACGTTCCAGTGACTTTTTaGGTAAAGGCACATGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RQPVKPTGELNKHPFLMDVPVTF*VKAHAW Trigger: CCAAGCATGTGCCTTTACTCAAAAAGTCACTGGAAC...GTCCATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | ATTCTCTTGGCAAAAGGAGCAGTCAGCATATTCTCTAGCTTCTGGGAAAGATCTGTCTCTCCCATTGGGTaGAGGACTGAATTGGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILLAKGAVSIFSSFWERSVSPIG*RTELDS Trigger: TGAATCCAATTCAGTCCTTCACCCAATGGGAGAGAC...AGATCTTTCCCAGAAGCTAGAGAATATGCTGACTGCTCCTTTTGCCAAGAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129462.3 |
||
| CDS-3UTR GCA 90 bp | AGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACTCTTGGAGTAAAATGTaGCCATGCTGGCTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RQPVKPTGELNKHPFLMDSWSKM*PCWLPH Trigger: ATGAGGAAGCCAGCATGGGCACATTTTACTCCAAGA...GTCCATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | CAAAAATTAAATAATCTTAATGGCACAGCGAGGAAGAGCCTGGCAGCATCTCTGTTCCCCACATTAGCATaGTGGGAATCCCCTAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: QKLNNLNGTARKSLAASLFPTLA*WESPRI Trigger: AATCCTAGGGGATTCCCAGCATGCTAATGTGGGGAA...CAGAGATGCTGCCAGGCTCTTCCTCGCTGTGCCATTAAGATTATTTAATTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036340.12 |
||
| CDS-3UTR GCA 90 bp | AGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACAGGAGTGGCATACATTaGTTCAGAAATGCCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: RQPVKPTGELNKHPFLMDRSGIH*FRNAST Trigger: TGTGGAGGCATTTCTGAAGCAATGTATGCCACTCCT...GTCCATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | GAGGTTAGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGTTGAGTAAAGGCACATaGTTGGTGAGTCTTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EVRQPVKPTGELNKHPFLLSKGT*LVSLVS Trigger: GGACACAAGACTCACCAAGCATGTGCCTTTACTCAA...CAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCTAACCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | GGGTTAGCAGCTGAACCACACAGTGCACAATGTCCTGGACAGATCTCTGATGAAGAATTGGATTCAGTGTaGATTTCAGTGTCTAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: GLAAEPHSAQCPGQISDEELDSV*ISVSKM Trigger: CATCTTAGACACTGAAATGCACACTGAATCCAATTC...TTCATCAGAGATCTGTCCAGGACATTGTGCACTGTGTGGTTCAGCTGCTAACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129462.3 |
||
| CDS-3UTR CCA 90 bp | CAAAAATTAAATAATCTTAATGGCACAGCGAGGAAGAGCCTGGCAGCATCTCTGCCCACATTAGCATGCTaGGAATCCCCTAGGATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QKLNNLNGTARKSLAASLPTLAC*ESPRIS Trigger: TGAAATCCTAGGGGATTCCCAGCATGCTAATGTGGG...CAGAGATGCTGCCAGGCTCTTCCTCGCTGTGCCATTAAGATTATTTAATTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036340.12 |
||
| CDS-3UTR CCA 90 bp | GTTAGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACCACACTGGAAACTaGGAACACTATGGTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VRQPVKPTGELNKHPFLMDHTGN*EHYGGS Trigger: ACTTCCACCATAGTGTTCCCAGTTTCCAGTGTGGTC...CATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | CAGCACCTAAGCACTGAAAGAAGTTGTGAATGTTCTCCAGATGGTTACACATCGTTTCAGTGTCTAAGATaGACTTGGTCACAAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QHLSTERSCECSPDGYTSFQCLR*TWSQVQ Trigger: CTGGACTTGTGACCAAGTTCATCTTAGACACTGAAA...CGATGTGTAACCATCTGGAGAACATTCACAACTTCTTTCAGTGCTTAGGTGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129462.3 |
||
| CDS-3UTR TCA 90 bp | GAGGTTAGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGTCTCTGATGAAGATGTaGGAAGCCAATATTCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EVRQPVKPTGELNKHPFLSLMKM*EANILP Trigger: AGGCAGAATATTGGCTTCTCACATCTTCATCAGAGA...CAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCTAACCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | AGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACTCTCTGATGAAGATGTaGGAAGCCAATATTCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RQPVKPTGELNKHPFLMDSLMKM*EANILP Trigger: AGGCAGAATATTGGCTTCTCACATCTTCATCAGAGA...GTCCATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | AAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACAAACAGGATGCTGTTCCAGTGACTTTTTaGGTAAAGGCACATGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KPTGELNKHPFLMDKQDAVPVTF*VKAHAW Trigger: CCAAGCATGTGCCTTTACTCAAAAAGTCACTGGAAC...AGCATCCTGTTTGTCCATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | TGGTCAACATATCTAATACCACAACAGCCAGGACTATGTAAAGAGACCCTGACAGTAAGTCTCGGTTTTTaGGAGTACCCAACCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WSTYLIPQQPGLCKETLTVSLGF*EYPTRK Trigger: CTTTCTGGTTGGGTACTCTCAAAAACCGAGACTTAC...TGTCAGGGTCTCTTTACATAGTCCTGGCTGTTGTGGTATTAGATATGTTGACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036340.12 |
||
| CDS-3UTR GCA 90 bp | AAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACAAACAGGATGCTATTGTGAGACTTCTTTaGCAGCTTGGAAAGGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KPTGELNKHPFLMDKQDAIVRLL*QLGKGH Trigger: ATGCCCCTTTCCAAGCTGGCAAAGAAGTCTCACAAT...AGCATCCTGTTTGTCCATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR GCA 90 bp | CAAAAATTAAATAATCTTAATGGCACAGCGAGGAAGAGCCTGGCAGCATCTCTGTTGAGTAAAGGCACATaGTTGGTGAGTCTTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QKLNNLNGTARKSLAASLLSKGT*LVSLVS Trigger: GGACACAAGACTCACCAAGCATGTGCCTTTACTCAA...CAGAGATGCTGCCAGGCTCTTCCTCGCTGTGCCATTAAGATTATTTAATTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036340.12 |
||
| CDS-3UTR CCA 90 bp | GAGGTTAGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGGCCAACTTCCTTTCTTaGATCAGGTTGGCAAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: EVRQPVKPTGELNKHPFLANFLS*IRLANS Trigger: TGAATTTGCCAACCTGATCCAAGAAAGGAAGTTGGC...CAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCTAACCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | AAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACAAACAGGATGCTGAGGAAGAGGGATCCTaGGAAATAATTTCTTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: KPTGELNKHPFLMDKQDAEEEGS*EIISSP Trigger: GGGTGAAGAAATTATTTCCCAGGATCCCTCTTCCTC...AGCATCCTGTTTGTCCATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | ACATATCTAATACCACAACAGCCAGGACTATGTAAAGAGACCCTGACACAGACCCTTTCATCACTGTCCTaGTCCTTCTGTTCATCACTT | + |
|
Preference number: 4 (lower is better) Translates to: TYLIPQQPGLCKETLTQTLSSLS*SFCSSL Trigger: AAGTGATGAACAGAAGGACCAGGACAGTGATGAAAG...GGTCTGTGTCAGGGTCTCTTTACATAGTCCTGGCTGTTGTGGTATTAGATATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036340.12 |
||
| CDS-3UTR TCA 90 bp | AGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACTTCTTGAATGCAGTCTaGCTGAATCTTGTTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RQPVKPTGELNKHPFLMDFLNAV*LNLVSQ Trigger: CTGAGAAACAAGATTCAGTCAGACTGCATTCAAGAA...GTCCATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR TCA 90 bp | GTTAGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGTTTCAGTGTCTAAGATaGACTTGGTCACAAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VRQPVKPTGELNKHPFLMFQCLR*TWSQVQ Trigger: CTGGACTTGTGACCAAGTTCATCTTAGACACTGAAA...CATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CCA 90 bp | ACATATCTAATACCACAACAGCCAGGACTATGTAAAGAGACCCTGACACAGACCACCACAAAGGCATCTTaGAAATCATTGAAGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TYLIPQQPGLCKETLTQTTTKAS*KSLKMV Trigger: GACCATCTTCAATGATTTCCAAGATGCCTTTGTGGT...GGTCTGTGTCAGGGTCTCTTTACATAGTCCTGGCTGTTGTGGTATTAGATATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036340.12 |
||
| CDS-3UTR CCA 90 bp | GAGGTTAGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATATTCTCTAGCTTCTaGGAAAGATCTTCCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EVRQPVKPTGELNKHPFLIFSSF*ERSSSK Trigger: CTTGCTGGAAGATCTTTCCCAGAAGCTAGAGAATAT...CAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCTAACCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| 3UTR CAA 72 bp | TTCTGCCTTCCTTTATTCTTAAAGCAGCAGATTCTCTaGGCAAAAGGAGCAGTCAGCATATTCTCTAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FCLPLFLKQQIL*AKGAVSIFSSF Trigger: GAAGCTAGAGAATATGCTGACTGCTCCTTTTGCCAAGAGAATCTGCTGCTTTAAGAATAAAGGAAGGCAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129462.3 |
||
| CDS-3UTR TCA 90 bp | CAAAAATTAAATAATCTTAATGGCACAGCGAGGAAGAGCCTGGCAGCATCTCTGGTGTCTGTTACAGAATaGAGAAGGAACTTTACAATC | + |
|
Preference number: 4 (lower is better) Translates to: QKLNNLNGTARKSLAASLVSVTE*RRNFTI Trigger: GATTGTAAAGTTCCTTCTTCATTCTGTAACAGACAC...CAGAGATGCTGCCAGGCTCTTCCTCGCTGTGCCATTAAGATTATTTAATTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036340.12 |
||
| CDS CCA 90 bp | AGAGCGCGTGCAAGACCTGCAGCAGCTTCTGGTAGCAGCAGGCCATaGTGTGCTGCTCCTGAGCTGTCGCTCTCGCCTTGTCATCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RARARPAAASGSSRP*CAAPELSLSPCHLH Trigger: GTGCAGATGACAAGGCGAGAGCGACAGCTCAGGAGCAGCACACCATGGCCTGCTGCTACCAGAAGCTGCTGCAGGTCTTGCACGCGCTCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | CAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCATCTTGGACAGGAAGTaGGGGTCAAGTCGGAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: QNPKAQLGHLHCTALQPSILDRK*GSSRRL Trigger: CAGTCTCCGACTTGACCCCAACTTCCTGTCCAAGAT...GCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | CAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCCGGCAAAGCAGCTGTTaGGCCAGAGAGGCAAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: QNPKAQLGHLHCTALQPSRQSSC*AREASF Trigger: AAAACTTGCCTCTCTGGCCAAACAGCTGCTTTGCCG...GCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | TCAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGTCACTGTCCTCTGCATaGCTCTCTGAGGAAGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SKPQGPARAPALHCTAAQSLSSA*LSEEEG Trigger: TCCCTCTTCCTCAGAGAGCAATGCAGAGGACAGTGA...CTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS GCA 90 bp | AAGCTCTGGCTGACCAGTTCCTCCAAGGGCTGGTCCTGTTCCATCTaGTTTAGTCGGTTCGAGAGGACCTCAAGGGCTGAGTGCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KLWLTSSSKGWSCSI*FSRFERTSRAECRR Trigger: CCTCCTGCACTCAGCCCTTGAGGTCCTCTCGAACCGACTAAAGCAGATGGAACAGGACCAGCCCTTGGAGGAACTGGTCAGCCAGAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | TCAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGAAGCAGCAGATTCTCTaGGCAAAAGGAGCAGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SKPQGPARAPALHCTAAQKQQIL*AKGAVS Trigger: GCTGACTGCTCCTTTTGCCAAGAGAATCTGCTGCTT...CTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | CAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCAGAGGAGTGGCATACATaGCTTCAGAAATGCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QGPARAPALHCTAAQPCSEEWHT*LQKCLH Trigger: GTGGAGGCATTTCTGAAGCAATGTATGCCACTCCTC...TGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | CAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCGTTCAACTGAAGGGTTaGCAGCAAGCTCAGAACATC | + |
|
Preference number: 5 (lower is better) Translates to: QNPKAQLGHLHCTALQPSVQLKG*QQAQNI Trigger: GATGTTCTGAGCTTGCTGCAAACCCTTCAGTTGAAC...GCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | CAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCAAAGCCTCTCTACAGTaGTTGAGGACAAGCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QNPKAQLGHLHCTALQPSKASLQ*LRTSMA Trigger: AGCCATGCTTGTCCTCAACAACTGTAGAGAGGCTTT...GCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS TCA 90 bp | CACCTGTGTGCGCTGCTCACTGCTCACATTGGCGCTCCTCTGGGATaGGTTAGATGGTACACTTCTGTCTTCCGCCATGATGCCGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: HLCALLTAHIGAPLG*VRWYTSVFRHDAGH Trigger: ATGGCCGGCATCATGGCGGAAGACAGAAGTGTACCATCTAACTCATCCCAGAGGAGCGCCAATGTGAGCAGTGAGCAGCGCACACAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036340.12 ENSMUST00000123738.2 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | CAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCAGCCAACTTCCTTTCTaGGATCAGGTTGGCAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: QNPKAQLGHLHCTALQPSSQLPF*DQVGKF Trigger: GAATTTGCCAACCTGATCCAAGAAAGGAAGTTGGCT...GCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | CAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCAGCATCTTGGAAATCATaGAAGATGGTCTGCCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: QGPARAPALHCTAAQPCSASWKS*KMVCPT Trigger: GGTTGGGCAGACCATCTTCAATGATTTCCAAGATGC...TGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | AACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCCATCTCGACTGGCATCTTTaGCACATTCCTGATAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: NPKAQLGHLHCTALQPSHLDWHL*HIPDRT Trigger: TGTTCTATCAGGAATGTGCAAAAGATGCCAGTCGAG...ATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS CCA 90 bp | GAAGTCACCTGTGTGCGCTGCTCACTGCTCACATTGGCGCTCCTCTaGGATGAGTTAGATGGTACACTTCTGTCTTCCGCCATGATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: EVTCVRCSLLTLALL*DELDGTLLSSAMMP Trigger: CGGCATCATGGCGGAAGACAGAAGTGTACCATCTAACTCATCCCAGAGGAGCGCCAATGTGAGCAGTGAGCAGCGCACACAGGTGACTTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036340.12 ENSMUST00000123738.2 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | TCAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGATGAGTCTGGCCATGTaGATTCCATCTCTGTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SKPQGPARAPALHCTAAQMSLAM*IPSLFS Trigger: TGAGAACAGAGATGGAATCAACATGGCCAGACTCAT...CTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | TGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCACCAACTGGCGGATCTaGGACAGGAAGTTGGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CTALHCSPAMFILVNDGCTNWRI*DRKLGS Trigger: TGACCCCAACTTCCTGTCCAAGATCCGCCAGTTGGT...GCATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | TGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCTTCCCTGTGGACTCCTaGTCTACGTGGCTTCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: CTALHCSPAMFILVNDGCFPVDS*STWLLP Trigger: TGGGAGAAGCCACGTAGACAAGGAGTCCACAGGGAA...GCATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | CTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCTTCCCCATCCTCTGTaGCTCTGTTCCTGGAGACGT | + |
|
Preference number: 5 (lower is better) Translates to: LHCTALQPSHVHPSQRWMLPHPL*LCSWRR Trigger: ACGTCTCCAGGAACAGAGCAACAGAGGATGGGGAAG...CATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS GCA 90 bp | GTTCCAATAGAGGAGCTTCTCTTCGTGAACCTGCTGCGAATCTGCTaGTGTGCCAGCCTGAAGACCCTTCACCGTCTTCTCGAGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VPIEELLFVNLLRIC*CASLKTLHRLLEFS Trigger: GCTGAACTCGAGAAGACGGTGAAGGGTCTTCAGGCTGGCACAGCAGCAGATTCGCAGCAGGTTCACGAAGAGAAGCTCCTCTATTGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | CTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGGAAAGGGGCATGGTTTaGGAGGCATCTTCTGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LHCTALQPSHVHPSQRWMERGMV*EASSVR Trigger: CCTGACAGAAGATGCCTCCAAAACCATGCCCCTTTC...CATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | ACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGAATCTTGGACAGGAAGTaGGGGTCAAGTCGGAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: TCTALHCSPAMFILVNDGILDRK*GSSRRL Trigger: CAGTCTCCGACTTGACCCCAACTTCCTGTCCAAGAT...TCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | AACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCCATGAACAGGATGCTTTGTaGCTATCAGCTTTTTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NPKAQLGHLHCTALQPSHEQDAL*LSAFCF Trigger: GAAACAAAAAGCTGATAGCAACAAAGCATCCTGTTC...ATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | CACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGGAGGAGTGGCATACATaGCTTCAGAAATGCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: HLHCTALQPSHVHPSQRWEEWHT*LQKCLH Trigger: GTGGAGGCATTTCTGAAGCAATGTATGCCACTCCTC...CCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS GCA 90 bp | AATAGAGGAGCTTCTCTTCGTGAACCTGCTGCGAATCTGCTGCTGTaGCAGCCTGAAGACCCTTCACCGTCTTCTCGAGTTCAGCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: NRGASLREPAANLLL*QPEDPSPSSRVQPS Trigger: TGATGGCTGAACTCGAGAAGACGGTGAAGGGTCTTCAGGCTGGCACAGCAGCAGATTCGCAGCAGGTTCACGAAGAGAAGCTCCTCTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS GCA 90 bp | CATGTTCCAATAGAGGAGCTTCTCTTCGTGAACCTGCTGCGAATCTaGTGCTGTGCCAGCCTGAAGACCCTTCACCGTCTTCTCGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: HVPIEELLFVNLLRI*CCASLKTLHRLLEF Trigger: GAACTCGAGAAGACGGTGAAGGGTCTTCAGGCTGGCACAGCAGCAGATTCGCAGCAGGTTCACGAAGAGAAGCTCCTCTATTGGAACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS CCA 90 bp | TTCTGCACCAGCAGCTCGCCAAGCTCTTTCCCCACATTAGCATGCTaGGAATCCCCTAGGATTTCAGGAAGGCTCGTGATGAAGTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: FCTSSSPSSFPTLAC*ESPRISGRLVMKSC Trigger: GCATGACTTCATCACGAGCCTTCCTGAAATCCTAGGGGATTCCCAGCATGCTAATGTGGGGAAAGAGCTTGGCGAGCTGCTGGTGCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS CCA 90 bp | AGGGAATGTAGAGGAGGCGGCGTCTTTCGGAGCACTGACCAGTTCTaGGACACCAACACCAGTGATCTCCTCTATGGCCTTCAGAACATT | + |
|
Preference number: 5 (lower is better) Translates to: RECRGGGVFRSTDQF*DTNTSDLLYGLQNI Trigger: AATGTTCTGAAGGCCATAGAGGAGATCACTGGTGTTGGTGTCCCAGAACTGGTCAGTGCTCCGAAAGACGCCGCCTCCTCTACATTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | CACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGGCATCTTGGAAATCATaGAAGATGGTCTGCCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: HLHCTALQPSHVHPSQRWASWKS*KMVCPT Trigger: GGTTGGGCAGACCATCTTCAATGATTTCCAAGATGC...CCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | CTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGAGCCGACTAAGAACCTaGCCCTTCATCTCAGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LHCTALQPSHVHPSQRWMSRLRT*PFISGD Trigger: ATCTCCTGAGATGAAGGGCAAGGTTCTTAGTCGGCT...CATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | TCAAAACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGGAACAGGATGCTTTGTaGCTATCAGCTTTTTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SKPQGPARAPALHCTAAQEQDAL*LSAFCF Trigger: GAAACAAAAAGCTGATAGCAACAAAGCATCCTGTTC...CTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTTTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | CTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGAAGCAGCAGATTCTCTaGGCAAAAGGAGCAGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LHCTALQPSHVHPSQRWMKQQIL*AKGAVS Trigger: GCTGACTGCTCCTTTTGCCAAGAGAATCTGCTGCTT...CATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | AACCCCAAGGCCCAGCTAGGGCACCTGCACTGCACTGCACTGCAGCCCAGCCATCCATATTTCATCAGATaGAGAAGGATGCTGAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: NPKAQLGHLHCTALQPSHPYFIR*RRMLKS Trigger: AGATTTCAGCATCCTTCTCAATCTGATGAAATATGG...ATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTGCCCTAGCTGGGCCTTGGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204827.3 |
||
| CDS GCA 90 bp | GTATTCTGCACCAGCAGCTCGCCAAGCTCTTTCCCCACATTAGCATaGTGGGAATCCCCTAGGATTTCAGGAAGGCTCGTGATGAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VFCTSSSPSSFPTLA*WESPRISGRLVMKS Trigger: TGACTTCATCACGAGCCTTCCTGAAATCCTAGGGGATTCCCAGCATGCTAATGTGGGGAAAGAGCTTGGCGAGCTGCTGGTGCAGAATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS GCA 90 bp | CTGGTCCTTCTGTTCATCACTTGCTTCATCTTCCCCATCCTCTGTTaGTCTGTTCCTGGAGACGTGAGATGTCACGCCATCCTCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LVLLFITCFIFPILC*SVPGDVRCHAILTV Trigger: GACAGTGAGGATGGCGTGACATCTCACGTCTCCAGGAACAGAGCAACAGAGGATGGGGAAGATGAAGCAAGTGATGAACAGAAGGACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS CCA 90 bp | GACACAAACGTCTTTCCTTCCTTCCCTGTGGACTCCTTGTCTACGTaGCTTCTCCCAGATGGCGCCATGTCACACTCTGAAGTGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: DTNVFPSFPVDSLST*LLPDGAMSHSEVSS Trigger: AGAAGACACTTCAGAGTGTGACATGGCGCCATCTGGGAGAAGCCACGTAGACAAGGAGTCCACAGGGAAGGAAGGAAAGACGTTTGTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | TGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCACCTCTCGGAACCAGTaGAAAGTTAGGAATGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CTALHCSPAMFILVNDGCTSRNQ*KVRNVS Trigger: GCTCACATTCCTAACTTTCAACTGGTTCCGAGAGGT...GCATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | AGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCTACACTGGACTCCTGAACTCACTGTCCTCTGCATaGCTCTCTGAGGAAGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SPAMFILVNDGCYTGLLNSLSSA*LSEEEG Trigger: TCCCTCTTCCTCAGAGAGCAATGCAGAGGACAGTGA...GTTCAGGAGTCCAGTGTAGCATCCATCGTTGACTAGGATGAACATGGCTGGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS GCA 90 bp | GCTGTCGTCACTTTCATCACTGTCCTGGTCCTTCTGTTCATCACTTaGTTCATCTTCCCCATCCTCTGTTGCTCTGTTCCTGGAGACGTG | + |
|
Preference number: 5 (lower is better) Translates to: AVVTFITVLVLLFIT*FIFPILCCSVPGDV Trigger: CACGTCTCCAGGAACAGAGCAACAGAGGATGGGGAAGATGAAGCAAGTGATGAACAGAAGGACCAGGACAGTGATGAAAGTGACGACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | AGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCTACACTGGACTCCTGAACGACTTCTTTGCCAGCTaGGAAAGGGGCATGGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPAMFILVNDGCYTGLLNDFFAS*ERGMVL Trigger: CAAAACCATGCCCCTTTCCAAGCTGGCAAAGAAGTC...GTTCAGGAGTCCAGTGTAGCATCCATCGTTGACTAGGATGAACATGGCTGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | AGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACCGGACAGATGACAGCTaGCCCATCACCAACTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RQPVKPTGELNKHPFLMDRTDDS*PITNWR Trigger: CCGCCAGTTGGTGATGGGCAAGCTGTCATCTGTCCG...GTCCATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | CTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGAGCCAACTTCCTTTCTaGGATCAGGTTGGCAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: LHCTALQPSHVHPSQRWMSQLPF*DQVGKF Trigger: GAATTTGCCAACCTGATCCAAGAAAGGAAGTTGGCT...CATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | CTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCTCGACTGGCATCTTTaGCACATTCCTGATAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: LHCTALQPSHVHPSQRWMLDWHL*HIPDRT Trigger: TGTTCTATCAGGAATGTGCAAAAGATGCCAGTCGAG...CATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | AGCAGGCCCCAGCTGTACGACCTCTGTAGCCTGAGGTGTGGAATGTGGAGAACAGTGTCTAAGATGAACTaGGTCACAAGTCCAGAATGT | + |
|
Preference number: 5 (lower is better) Translates to: SRPQLYDLCSLRCGMWRTVSKMN*VTSPEC Trigger: ACATTCTGGACTTGTGACCAAGTTCATCTTAGACAC...TGTTCTCCACATTCCACACCTCAGGCTACAGAGGTCGTACAGCTGGGGCCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129462.3 |
||
| CDS-3UTR CAA 90 bp | TGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCAGGACAAGCATGGCTTaGACTCTGCAAACTAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: CTALHCSPAMFILVNDGCRTSMA*TLQTNS Trigger: ACTGTTAGTTTGCAGAGTCAAAGCCATGCTTGTCCT...GCATCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS GCA 90 bp | TGCTGGGAATCCCCTAGGATTTCAGGAAGGCTCGTGATGAAGTCATaGTGTAAGTTCACGGGAGCAACACTGATCAACTGCATCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CWESPRISGRLVMKS*CKFTGATLINCIIW Trigger: CCAGATGATGCAGTTGATCAGTGTTGCTCCCGTGAACTTACAGCATGACTTCATCACGAGCCTTCCTGAAATCCTAGGGGATTCCCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS GCA 90 bp | ACTTTACAATCACAGGGAAATCCTCTAGACGGACAGATGACAGCTTaGCCATCACCAACTGGCGGATCTTGGACAGGAAGTTGGGGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: TLQSQGNPLDGQMTA*PSPTGGSWTGSWGQ Trigger: TTGACCCCAACTTCCTGTCCAAGATCCGCCAGTTGGTGATGGGCAAGCTGTCATCTGTCCGTCTAGAGGATTTCCCTGTGATTGTAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS GCA 90 bp | AGCAGCTCAGCAGGCCCCAGCTGTACGACCTCTGTAGCTTCAGTGTaGATTTCAGTGTCTAAGATGAACTTGGTCACAAGTCCAGAATGT | + |
|
Preference number: 5 (lower is better) Translates to: SSSAGPSCTTSVASV*ISVSKMNLVTSPEC Trigger: ACATTCTGGACTTGTGACCAAGTTCATCTTAGACACTGAAATGCACACTGAAGCTACAGAGGTCGTACAGCTGGGGCCTGCTGAGCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS CCA 90 bp | ATGACAGCTTGCCCATCACCAACTGGCGGATCTTGGACAGGAAGTTaGGGTCAAGTCGGAGACTGGAAAAGACATCCAAAATTGGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: MTACPSPTGGSWTGS*GQVGDWKRHPKLEQ Trigger: CTGTTCCAATTTTGGATGTCTTTTCCAGTCTCCGACTTGACCCCAACTTCCTGTCCAAGATCCGCCAGTTGGTGATGGGCAAGCTGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR CAA 90 bp | AGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCTACACTGGACTCCTGAACAATTGTGAGACTTCTTaGCCAGCTTGGAAAGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SPAMFILVNDGCYTGLLNNCETS*PAWKGA Trigger: TGCCCCTTTCCAAGCTGGCAAAGAAGTCTCACAATT...GTTCAGGAGTCCAGTGTAGCATCCATCGTTGACTAGGATGAACATGGCTGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR CAA 90 bp | CAAAAATTAAATAATCTTAATGGCACAGCGAGGAAGAGCCTGGCAGCATCTCTGCGGACAGATGACAGCTaGCCCATCACCAACTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: QKLNNLNGTARKSLAASLRTDDS*PITNWR Trigger: CCGCCAGTTGGTGATGGGCAAGCTGTCATCTGTCCG...CAGAGATGCTGCCAGGCTCTTCCTCGCTGTGCCATTAAGATTATTTAATTTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036340.12 |
||
| CDS-3UTR CAA 90 bp | CACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGTACCACAAAGGCATCTaGGAAATCATTGAAGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: HLHCTALQPSHVHPSQRWYHKGI*EIIEDG Trigger: ACCATCTTCAATGATTTCCAAGATGCCTTTGTGGTA...CCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR CAA 90 bp | ACCTGCACTGCACTGCACTGCAGCCCAGCCATGTTCATCCTAGTCAACGATGGAGTGTCTAAGATGAACTaGGTCACAAGTCCAGAATGT | + |
|
Preference number: 5 (lower is better) Translates to: TCTALHCSPAMFILVNDGVSKMN*VTSPEC Trigger: ACATTCTGGACTTGTGACCAAGTTCATCTTAGACAC...TCCATCGTTGACTAGGATGAACATGGCTGGGCTGCAGTGCAGTGCAGTGCAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR CAA 90 bp | AGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCTACACTGGACTCCTGAACCCTTCTGTTCATCACTaGCTTCATCTTCCCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPAMFILVNDGCYTGLLNPSVHH*LHLPHP Trigger: AGGATGGGGAAGATGAAGCAAGTGATGAACAGAAGG...GTTCAGGAGTCCAGTGTAGCATCCATCGTTGACTAGGATGAACATGGCTGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS CCA 90 bp | GCTCAGAACATCTTCCCGATGCTTTCTAAAGCTGAAGTCGAGGAGTaGCATACATTGCTTCAGAAATGCCTCCACAAAGCGACGGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: AQNIFPMLSKAEVEE*HTLLQKCLHKATAI Trigger: TATGGCCGTCGCTTTGTGGAGGCATTTCTGAAGCAATGTATGCCACTCCTCGACTTCAGCTTTAGAAAGCATCGGGAAGATGTTCTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS-3UTR CAA 90 bp | CAGATTCTCTTGGCAAAAGGAGCAGTCAGCATATTCTCTAGCTTCTGGGAAAGATTCCCTGTGGACTCCTaGTCTACGTGGCTTCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QILLAKGAVSIFSSFWERFPVDS*STWLLP Trigger: TGGGAGAAGCCACGTAGACAAGGAGTCCACAGGGAA...TCTTTCCCAGAAGCTAGAGAATATGCTGACTGCTCCTTTTGCCAAGAGAATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129462.3 |
||
| CDS-3UTR CAA 90 bp | TGGTCAACATATCTAATACCACAACAGCCAGGACTATGTAAAGAGACCCTGACAACCAACTGGCGGATCTaGGACAGGAAGTTGGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: WSTYLIPQQPGLCKETLTTNWRI*DRKLGS Trigger: TGACCCCAACTTCCTGTCCAAGATCCGCCAGTTGGT...TGTCAGGGTCTCTTTACATAGTCCTGGCTGTTGTGGTATTAGATATGTTGACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036340.12 |
||
| CDS-3UTR CAA 90 bp | CAAAAATTAAATAATCTTAATGGCACAGCGAGGAAGAGCCTGGCAGCATCTCTGTTCCCTGTGGACTCCTaGTCTACGTGGCTTCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QKLNNLNGTARKSLAASLFPVDS*STWLLP Trigger: TGGGAGAAGCCACGTAGACAAGGAGTCCACAGGGAA...CAGAGATGCTGCCAGGCTCTTCCTCGCTGTGCCATTAAGATTATTTAATTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036340.12 |
||
| CDS-3UTR CAA 90 bp | GAGGTTAGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGCGGCAAAGCAGCTGTTaGGCCAGAGAGGCAAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: EVRQPVKPTGELNKHPFLRQSSC*AREASF Trigger: AAAACTTGCCTCTCTGGCCAAACAGCTGCTTTGCCG...CAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCTAACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | CAAAAATTAAATAATCTTAATGGCACAGCGAGGAAGAGCCTGGCAGCATCTCTGCTTCCCCATCCTCTGTaGCTCTGTTCCTGGAGACGT | + |
|
Preference number: 5 (lower is better) Translates to: QKLNNLNGTARKSLAASLLPHPL*LCSWRR Trigger: ACGTCTCCAGGAACAGAGCAACAGAGGATGGGGAAG...CAGAGATGCTGCCAGGCTCTTCCTCGCTGTGCCATTAAGATTATTTAATTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036340.12 |
||
| CDS GCA 90 bp | TCTTCCCGATGCTTTCTAAAGCTGAAGTCGAGGAGTGGCATACATTaGTTCAGAAATGCCTCCACAAAGCGACGGCCATACTTTAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: SSRCFLKLKSRSGIH*FRNASTKRRPYFKH Trigger: GTGTTTAAAGTATGGCCGTCGCTTTGTGGAGGCATTTCTGAAGCAATGTATGCCACTCCTCGACTTCAGCTTTAGAAAGCATCGGGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036340.12 |
||
| CDS GCA 90 bp | TCTTCCCGATGCTTTCTAAAGCTGAAGTCGAGGAGTGGCATACATTaGTTCAGAAATGCCTCCACAAAGCGACGGCCATATTTCATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSRCFLKLKSRSGIH*FRNASTKRRPYFIR Trigger: TCTGATGAAATATGGCCGTCGCTTTGTGGAGGCATTTCTGAAGCAATGTATGCCACTCCTCGACTTCAGCTTTAGAAAGCATCGGGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204827.3 |
||
| CDS CCA 90 bp | ACCAGGTGCATGTCGTCCTGGATATGGTTGCTGGTTCCGGGCTGTTaGCTAAATGCAAGAGTGCTGAGAATACAGAAGATTTTTCGTATT | + |
|
Preference number: 5 (lower is better) Translates to: TRCMSSWIWLLVPGC*LNARVLRIQKIFRI Trigger: AATACGAAAAATCTTCTGTATTCTCAGCACTCTTGCATTTAGCCAACAGCCCGGAACCAGCAACCATATCCAGGACGACATGCACCTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS CCA 90 bp | CCATCCTCACTGTCCTCTGCATTGCTCTCTGAGGAAGAGGGATCCTaGGAAATAATTTCTTCACCCTGTAAGTCTCGGTTTTTGAGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: PSSLSSALLSEEEGS*EIISSPCKSRFLRV Trigger: TACTCTCAAAAACCGAGACTTACAGGGTGAAGAAATTATTTCCCAGGATCCCTCTTCCTCAGAGAGCAATGCAGAGGACAGTGAGGATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | CAAAAATTAAATAATCTTAATGGCACAGCGAGGAAGAGCCTGGCAGCATCTCTGGAAAGGGGCATGGTTTaGGAGGCATCTTCTGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QKLNNLNGTARKSLAASLERGMV*EASSVR Trigger: CCTGACAGAAGATGCCTCCAAAACCATGCCCCTTTC...CAGAGATGCTGCCAGGCTCTTCCTCGCTGTGCCATTAAGATTATTTAATTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036340.12 |
||
| CDS-3UTR CAA 90 bp | AGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACGACTTCTTTGCCAGCTaGGAAAGGGGCATGGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RQPVKPTGELNKHPFLMDDFFAS*ERGMVL Trigger: CAAAACCATGCCCCTTTCCAAGCTGGCAAAGAAGTC...GTCCATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | AGCCCAGCCATGTTCATCCTAGTCAACGATGGATGCTACACTGGACTCCTGAACTACCACAAAGGCATCTaGGAAATCATTGAAGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: SPAMFILVNDGCYTGLLNYHKGI*EIIEDG Trigger: ACCATCTTCAATGATTTCCAAGATGCCTTTGTGGTA...GTTCAGGAGTCCAGTGTAGCATCCATCGTTGACTAGGATGAACATGGCTGGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS GCA 90 bp | ACTCTGCAAACTAACAGTTCCAGTGACTTTTTGAGTAAAGGCACATaGTTGGTGAGTCTTGTGTCCTGGCGAATCTTGGAGTGTCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: TLQTNSSSDFLSKGT*LVSLVSWRILECPQ Trigger: TTGTGGACACTCCAAGATTCGCCAGGACACAAGACTCACCAAGCATGTGCCTTTACTCAAAAAGTCACTGGAACTGTTAGTTTGCAGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | AGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACACCTCTCGGAACCAGTaGAAAGTTAGGAATGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RQPVKPTGELNKHPFLMDTSRNQ*KVRNVS Trigger: GCTCACATTCCTAACTTTCAACTGGTTCCGAGAGGT...GTCCATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | CAAAAATTAAATAATCTTAATGGCACAGCGAGGAAGAGCCTGGCAGCATCTCTGAGCCGACTAAGAACCTaGCCCTTCATCTCAGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: QKLNNLNGTARKSLAASLSRLRT*PFISGD Trigger: ATCTCCTGAGATGAAGGGCAAGGTTCTTAGTCGGCT...CAGAGATGCTGCCAGGCTCTTCCTCGCTGTGCCATTAAGATTATTTAATTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036340.12 |
||
| CDS GCA 90 bp | CTTTCTAAAGCTGAAGTCGAGGAGTGGCATACATTGCTTCAGAAATaGCTCCACAAAGCGACGGCCATATTTCATCAGATTGAGAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LSKAEVEEWHTLLQK*LHKATAIFHQIEKD Trigger: ATCCTTCTCAATCTGATGAAATATGGCCGTCGCTTTGTGGAGGCATTTCTGAAGCAATGTATGCCACTCCTCGACTTCAGCTTTAGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | GTTAGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGTTCCATCATGTTGTCTaGCCACGCAAAGTCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VRQPVKPTGELNKHPFLMFHHVV*PRKVSA Trigger: TGCTGAGACTTTGCGTGGCAAGACAACATGATGGAA...CATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | CAAAAATTAAATAATCTTAATGGCACAGCGAGGAAGAGCCTGGCAGCATCTCTGGTTCAACTGAAGGGTTaGCAGCAAGCTCAGAACATC | + |
|
Preference number: 5 (lower is better) Translates to: QKLNNLNGTARKSLAASLVQLKG*QQAQNI Trigger: GATGTTCTGAGCTTGCTGCAAACCCTTCAGTTGAAC...CAGAGATGCTGCCAGGCTCTTCCTCGCTGTGCCATTAAGATTATTTAATTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036340.12 |
||
| CDS-3UTR CAA 90 bp | TGGTCAACATATCTAATACCACAACAGCCAGGACTATGTAAAGAGACCCTGACACCTTGTTTCTGTTTTTaGCTGCAACAGCAGAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: WSTYLIPQQPGLCKETLTPCFCF*LQQQNC Trigger: GCAGTTCTGCTGTTGCAGCAAAAAACAGAAACAAGG...TGTCAGGGTCTCTTTACATAGTCCTGGCTGTTGTGGTATTAGATATGTTGACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036340.12 |
||
| CDS-3UTR CAA 90 bp | AAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACAAACAGGATGCTCCTTGTTTCTGTTTTTaGCTGCAACAGCAGAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: KPTGELNKHPFLMDKQDAPCFCF*LQQQNC Trigger: GCAGTTCTGCTGTTGCAGCAAAAAACAGAAACAAGG...AGCATCCTGTTTGTCCATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | AGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACGTGTCTAAGATGAACTaGGTCACAAGTCCAGAATGT | + |
|
Preference number: 5 (lower is better) Translates to: RQPVKPTGELNKHPFLMDVSKMN*VTSPEC Trigger: ACATTCTGGACTTGTGACCAAGTTCATCTTAGACAC...GTCCATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | AGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACAGTTCCAGTGACTTTTaGAGTAAAGGCACATGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RQPVKPTGELNKHPFLMDSSSDF*SKGTCL Trigger: CAAGCATGTGCCTTTACTCAAAAAGTCACTGGAACT...GTCCATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | GAGGTTAGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGAGTTCCAGTGACTTTTaGAGTAAAGGCACATGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EVRQPVKPTGELNKHPFLSSSDF*SKGTCL Trigger: CAAGCATGTGCCTTTACTCAAAAAGTCACTGGAACT...CAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCTAACCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | AAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGACAAACAGGATGCTGATTTCCTGAAGAGCTaGCTAGTCCTTTACTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KPTGELNKHPFLMDKQDADFLKS*LVLYFS Trigger: TGAAAAGTAAAGGACTAGCAAGCTCTTCAGGAAATC...AGCATCCTGTTTGTCCATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS-3UTR CAA 90 bp | GTTAGACAACCTGTGAAACCCACTGGGGAATTAAATAAACACCCCTTCTTGATGGATTTCCTGAAGAGCTaGCTAGTCCTTTACTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VRQPVKPTGELNKHPFLMDFLKS*LVLYFS Trigger: TGAAAAGTAAAGGACTAGCAAGCTCTTCAGGAAATC...CATCAAGAAGGGGTGTTTATTTAATTCCCCAGTGGGTTTCACAGGTTGTCTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS CCA 72 bp | GCAAGACCTGCAGCAGCTTCTGGTAGCAGCAGGCCATaGTGTGCTGCTCCTGAGCTGTCGCTCTCGCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: ARPAAASGSSRP*CAAPELSLSPC Trigger: ACAAGGCGAGAGCGACAGCTCAGGAGCAGCACACCATGGCCTGCTGCTACCAGAAGCTGCTGCAGGTCTTGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS GCA 72 bp | GAGGAGCTTCTCTTCGTGAACCTGCTGCGAATCTGCTaGTGTGCCAGCCTGAAGACCCTTCACCGTCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: EELLFVNLLRIC*CASLKTLHRLL Trigger: GAGAAGACGGTGAAGGGTCTTCAGGCTGGCACAGCAGCAGATTCGCAGCAGGTTCACGAAGAGAAGCTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS CCA 72 bp | AGAGGAGGCGGCGTCTTTCGGAGCACTGACCAGTTCTaGGACACCAACACCAGTGATCTCCTCTATGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: RGGGVFRSTDQF*DTNTSDLLYGL Trigger: AAGGCCATAGAGGAGATCACTGGTGTTGGTGTCCCAGAACTGGTCAGTGCTCCGAAAGACGCCGCCTCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS GCA 72 bp | GCTTCTCTTCGTGAACCTGCTGCGAATCTGCTGCTGTaGCAGCCTGAAGACCCTTCACCGTCTTCTCGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: ASLREPAANLLL*QPEDPSPSSRV Trigger: AACTCGAGAAGACGGTGAAGGGTCTTCAGGCTGGCACAGCAGCAGATTCGCAGCAGGTTCACGAAGAGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS CCA 72 bp | TCTAGACGGACAGATGACAGCTTGCCCATCACCAACTaGCGGATCTTGGACAGGAAGTTGGGGTCAAGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: SRRTDDSLPITN*RILDRKLGSSR Trigger: CCGACTTGACCCCAACTTCCTGTCCAAGATCCGCCAGTTGGTGATGGGCAAGCTGTCATCTGTCCGTCTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS GCA 72 bp | ATAGAGGAGCTTCTCTTCGTGAACCTGCTGCGAATCTaGTGCTGTGCCAGCCTGAAGACCCTTCACCGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: IEELLFVNLLRI*CCASLKTLHRL Trigger: AAGACGGTGAAGGGTCTTCAGGCTGGCACAGCAGCAGATTCGCAGCAGGTTCACGAAGAGAAGCTCCTCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS CCA 72 bp | AGCAGCTCGCCAAGCTCTTTCCCCACATTAGCATGCTaGGAATCCCCTAGGATTTCAGGAAGGCTCGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: SSSPSSFPTLAC*ESPRISGRLVM Trigger: CATCACGAGCCTTCCTGAAATCCTAGGGGATTCCCAGCATGCTAATGTGGGGAAAGAGCTTGGCGAGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS CCA 72 bp | TGCTTCCGGATCACCAGGTGCATGTCGTCCTGGATATaGTTGCTGGTTCCGGGCTGTTGGCTAAATGCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: CFRITRCMSSWI*LLVPGCWLNAR Trigger: TCTTGCATTTAGCCAACAGCCCGGAACCAGCAACCATATCCAGGACGACATGCACCTGGTGATCCGGAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS CCA 72 bp | GTCTTTCCTTCCTTCCCTGTGGACTCCTTGTCTACGTaGCTTCTCCCAGATGGCGCCATGTCACACTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: VFPSFPVDSLST*LLPDGAMSHSE Trigger: TTCAGAGTGTGACATGGCGCCATCTGGGAGAAGCCACGTAGACAAGGAGTCCACAGGGAAGGAAGGAAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS GCA 72 bp | TCACAGGGAAATCCTCTAGACGGACAGATGACAGCTTaGCCATCACCAACTGGCGGATCTTGGACAGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: SQGNPLDGQMTA*PSPTGGSWTGS Trigger: ACTTCCTGTCCAAGATCCGCCAGTTGGTGATGGGCAAGCTGTCATCTGTCCGTCTAGAGGATTTCCCTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS GCA 72 bp | TCAGCCATCATCACACGGAAGAATATGACAAAGGTGTaGCTGGTCAACGTAGGGAATGTAGAGGAGGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SAIITRKNMTKV*LVNVGNVEEAA Trigger: CGCCGCCTCCTCTACATTCCCTACGTTGACCAGGCACACCTTTGTCATATTCTTCCGTGTGATGATGGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS CAA 72 bp | ATCACAGGGAAATCCTCTAGACGGACAGATGACAGCTaGCCCATCACCAACTGGCGGATCTTGGACAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ITGKSSRRTDDS*PITNWRILDRK Trigger: CTTCCTGTCCAAGATCCGCCAGTTGGTGATGGGCAAGCTGTCATCTGTCCGTCTAGAGGATTTCCCTGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS CAA 72 bp | GCAGCCGGAAATGGGAAGCCAGGCACAAAGAAGACATaGATCTCTGGCTCGATTCTTGTGATGTCGCTCGAC | + |
|
Preference number: 6 (lower is better) Translates to: AAGNGKPGTKKT*ISGSILVMSLD Trigger: GTCGAGCGACATCACAAGAATCGAGCCAGAGATCAATGTCTTCTTTGTGCCTGGCTTCCCATTTCCGGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS CAA 90 bp | CCTGGTCCTTCTGTTCATCACTTGCTTCATCTTCCCCATCCTCTGTaGCTCTGTTCCTGGAGACGTGAGATGTCACGCCATCCTCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: PGPSVHHLLHLPHPL*LCSWRREMSRHPHC Trigger: ACAGTGAGGATGGCGTGACATCTCACGTCTCCAGGAACAGAGCAACAGAGGATGGGGAAGATGAAGCAAGTGATGAACAGAAGGACCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS CAA 90 bp | AGTTGTAGCAAAGAAGTCACCTGTGTGCGCTGCTCACTGCTCACATaGGCGCTCCTCTGGGATGAGTTAGATGGTACACTTCTGTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SCSKEVTCVRCSLLT*ALLWDELDGTLLSS Trigger: GGAAGACAGAAGTGTACCATCTAACTCATCCCAGAGGAGCGCCAATGTGAGCAGTGAGCAGCGCACACAGGTGACTTCTTTGCTACAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036340.12 ENSMUST00000123738.2 ENSMUST00000204827.3 |
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| CDS TCA 72 bp | GTACTGCAGACTTCTCCAGAAGGGCCATCAGAAGTCTaGGAAGGTAGAGACCACACTGGAAACTGGGAACAC | + |
|
Preference number: 6 (lower is better) Translates to: VLQTSPEGPSEV*EGRDHTGNWEH Trigger: GTGTTCCCAGTTTCCAGTGTGGTCTCTACCTTCTCAGACTTCTGATGGCCCTTCTGGAGAAGTCTGCAGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS GCA 72 bp | CTGCTTCCGGATCACCAGGTGCATGTCGTCCTGCAATaGGATAATGAGGTGAGAACAGAGAGACTGGATATG | + |
|
Preference number: 6 (lower is better) Translates to: LLPDHQVHVVLQ*DNEVRTERLDM Trigger: CATATCCAGTCTCTCTGTTCTCACCTCATTATCGCATTGCAGGACGACATGCACCTGGTGATCCGGAAGCAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123738.2 |
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| CDS CAA 90 bp | AACTTTACAATCACAGGGAAATCCTCTAGACGGACAGATGACAGCTaGCCCATCACCAACTGGCGGATCTTGGACAGGAAGTTGGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: NFTITGKSSRRTDDS*PITNWRILDRKLGS Trigger: TGACCCCAACTTCCTGTCCAAGATCCGCCAGTTGGTGATGGGCAAGCTGTCATCTGTCCGTCTAGAGGATTTCCCTGTGATTGTAAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS TCA 72 bp | AGAGAAGAGGCCCAAGGAGAGTGCTCAGTGCAAGAATaGACTAGTTGTAGCAAAGAAGTCACCTGTGTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: REEAQGECSVQE*TSCSKEVTCVR Trigger: GCGCACACAGGTGACTTCTTTGCTACAACTAGTTCATTCTTGCACTGAGCACTCTCCTTGGGCCTCTTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036340.12 ENSMUST00000123738.2 ENSMUST00000204827.3 |
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| CDS TCA 72 bp | TGTCACGCCATCCTCACTGTCCTCTGCATTGCTCTCTaGGGAAGAGGGATCCTGGGAAATAATTTCTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: CHAILTVLCIAL*GRGILGNNFFT Trigger: GGTGAAGAAATTATTTCCCAGGATCCCTCTTCCTCAGAGAGCAATGCAGAGGACAGTGAGGATGGCGTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS GCA 72 bp | GCAGGCCCCAGCTGTACGACCTCTGTAGCTTCAGTGTaGATTTCAGTGTCTAAGATGAACTTGGTCACAAGT | + |
|
Preference number: 6 (lower is better) Translates to: AGPSCTTSVASV*ISVSKMNLVTS Trigger: ACTTGTGACCAAGTTCATCTTAGACACTGAAATGCACACTGAAGCTACAGAGGTCGTACAGCTGGGGCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS TCA 72 bp | AGTCAACGCTTGCGAAAGGCGGAACATAGTCTGGGATaGCTGCCAAGTACTTCTCTAGGATTCCCTGAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SQRLRKAEHSLG*LPSTSLGFPEV Trigger: AACTTCAGGGAATCCTAGAGAAGTACTTGGCAGTCATCCCAGACTATGTTCCGCCTTTCGCAAGCGTTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS GCA 72 bp | TGCTTTCTAAAGCTGAAGTCGAGGAGTGGCATACATTaGTTCAGAAATGCCTCCACAAAGCGACGGCCATAC | + |
|
Preference number: 6 (lower is better) Translates to: CFLKLKSRSGIH*FRNASTKRRPY Trigger: GTATGGCCGTCGCTTTGTGGAGGCATTTCTGAAGCAATGTATGCCACTCCTCGACTTCAGCTTTAGAAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036340.12 |
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| CDS CCA 72 bp | AGCTGTTTGGCCAGAGAGGCAAGTTTTTCTTTCTTCTaGTTAGGTACTGCAGACTTCTCCAGAAGGGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: SCLAREASFSFF*LGTADFSRRAI Trigger: GATGGCCCTTCTGGAGAAGTCTGCAGTACCTAACCAGAAGAAAGAAAAACTTGCCTCTCTGGCCAAACAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS CAA 90 bp | CACCAGGTGCATGTCGTCCTGGATATGGTTGCTGGTTCCGGGCTGTaGGCTAAATGCAAGAGTGCTGAGAATACAGAAGATTTTTCGTAT | + |
|
Preference number: 6 (lower is better) Translates to: HQVHVVLDMVAGSGL*AKCKSAENTEDFSY Trigger: ATACGAAAAATCTTCTGTATTCTCAGCACTCTTGCATTTAGCCAACAGCCCGGAACCAGCAACCATATCCAGGACGACATGCACCTGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS CAA 90 bp | CTGCAAACTAACAGTTCCAGTGACTTTTTGAGTAAAGGCACATGCTaGGTGAGTCTTGTGTCCTGGCGAATCTTGGAGTGTCCACAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LQTNSSSDFLSKGTC*VSLVSWRILECPQR Trigger: CCTTTGTGGACACTCCAAGATTCGCCAGGACACAAGACTCACCAAGCATGTGCCTTTACTCAAAAAGTCACTGGAACTGTTAGTTTGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS CAA 90 bp | ATCTTCCCGATGCTTTCTAAAGCTGAAGTCGAGGAGTGGCATACATaGCTTCAGAAATGCCTCCACAAAGCGACGGCCATATTTCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: IFPMLSKAEVEEWHT*LQKCLHKATAIFHQ Trigger: CTGATGAAATATGGCCGTCGCTTTGTGGAGGCATTTCTGAAGCAATGTATGCCACTCCTCGACTTCAGCTTTAGAAAGCATCGGGAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204827.3 |
||
| CDS TCA 72 bp | TCTGGGATGACTGCCAAGTACTTCTCTAGGATTCCCTaGAGTTCTACAAGGTCCTTTAGCCGACTAAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: SGMTAKYFSRIP*SSTRSFSRLRT Trigger: GGTTCTTAGTCGGCTAAAGGACCTTGTAGAACTTCAGGGAATCCTAGAGAAGTACTTGGCAGTCATCCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS GCA 72 bp | AAGACATCCAAAATTGGAACAGTCAGGGAAGTATTCTaGACCAGCAGCTCGCCAAGCTCTTTCCCCACATTA | + |
|
Preference number: 6 (lower is better) Translates to: KTSKIGTVREVF*TSSSPSSFPTL Trigger: TAATGTGGGGAAAGAGCTTGGCGAGCTGCTGGTGCAGAATACTTCCCTGACTGTTCCAATTTTGGATGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS GCA 72 bp | CAGAGAGGCAAGTTTTTCTTTCTTCTGGTTAGGTACTaGAGACTTCTCCAGAAGGGCCATCAGAAGTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: QRGKFFFLLVRY*RLLQKGHQKSE Trigger: CTCAGACTTCTGATGGCCCTTCTGGAGAAGTCTGCAGTACCTAACCAGAAGAAAGAAAAACTTGCCTCTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS GCA 72 bp | ACTTTCATCACTGTCCTGGTCCTTCTGTTCATCACTTaGTTCATCTTCCCCATCCTCTGTTGCTCTGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: TFITVLVLLFIT*FIFPILCCSVP Trigger: AGGAACAGAGCAACAGAGGATGGGGAAGATGAAGCAAGTGATGAACAGAAGGACCAGGACAGTGATGAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS GCA 72 bp | GCTGAAGTCGAGGAGTGGCATACATTGCTTCAGAAATaGCTCCACAAAGCGACGGCCATATTTCATCAGATT | + |
|
Preference number: 6 (lower is better) Translates to: AEVEEWHTLLQK*LHKATAIFHQI Trigger: AATCTGATGAAATATGGCCGTCGCTTTGTGGAGGCATTTCTGAAGCAATGTATGCCACTCCTCGACTTCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204827.3 |
||
| CDS GCA 72 bp | TGCTTTCTAAAGCTGAAGTCGAGGAGTGGCATACATTaGTTCAGAAATGCCTCCACAAAGCGACGGCCATAT | + |
|
Preference number: 6 (lower is better) Translates to: CFLKLKSRSGIH*FRNASTKRRPY Trigger: ATATGGCCGTCGCTTTGTGGAGGCATTTCTGAAGCAATGTATGCCACTCCTCGACTTCAGCTTTAGAAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204827.3 |
||
| CDS CCA 72 bp | ATCTTCCCGATGCTTTCTAAAGCTGAAGTCGAGGAGTaGCATACATTGCTTCAGAAATGCCTCCACAAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: IFPMLSKAEVEE*HTLLQKCLHKA Trigger: CGCTTTGTGGAGGCATTTCTGAAGCAATGTATGCCACTCCTCGACTTCAGCTTTAGAAAGCATCGGGAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
||
| CDS CAA 72 bp | ATGCTTTCTAAAGCTGAAGTCGAGGAGTGGCATACATaGCTTCAGAAATGCCTCCACAAAGCGACGGCCATA | + |
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Preference number: 6 (lower is better) Translates to: MLSKAEVEEWHT*LQKCLHKATAI Trigger: TATGGCCGTCGCTTTGTGGAGGCATTTCTGAAGCAATGTATGCCACTCCTCGACTTCAGCTTTAGAAAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS CAA 72 bp | AATGCCTCCACAAAGCGACGGCCATATTTCATCAGATaGAGAAGGATGCTGAAATCTCGGACAGCCATGTTC | + |
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Preference number: 6 (lower is better) Translates to: NASTKRRPYFIR*RRMLKSRTAMF Trigger: GAACATGGCTGTCCGAGATTTCAGCATCCTTCTCAATCTGATGAAATATGGCCGTCGCTTTGTGGAGGCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204827.3 |
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| CDS CAA 90 bp | CCCAACCAGAAAGCCTCTCTACAGTTGTTGAGGACAAGCATGGCTTaGACTCTGCAAACTAACAGTTCCAGTGACTTTTTGAGTAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: PNQKASLQLLRTSMA*TLQTNSSSDFLSKG Trigger: GCCTTTACTCAAAAAGTCACTGGAACTGTTAGTTTGCAGAGTCAAAGCCATGCTTGTCCTCAACAACTGTAGAGAGGCTTTCTGGTTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS CAA 90 bp | TCTCGGTTTTTGAGAGTACCCAACCAGAAAGCCTCTCTACAGTTGTaGAGGACAAGCATGGCTTTGACTCTGCAAACTAACAGTTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: SRFLRVPNQKASLQL*RTSMALTLQTNSSS Trigger: ACTGGAACTGTTAGTTTGCAGAGTCAAAGCCATGCTTGTCCTCAACAACTGTAGAGAGGCTTTCTGGTTGGGTACTCTCAAAAACCGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS CAA 90 bp | AAGTCTCGGTTTTTGAGAGTACCCAACCAGAAAGCCTCTCTACAGTaGTTGAGGACAAGCATGGCTTTGACTCTGCAAACTAACAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: KSRFLRVPNQKASLQ*LRTSMALTLQTNSS Trigger: GGAACTGTTAGTTTGCAGAGTCAAAGCCATGCTTGTCCTCAACAACTGTAGAGAGGCTTTCTGGTTGGGTACTCTCAAAAACCGAGACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS CAA 90 bp | GAGGGATCCTGGGAAATAATTTCTTCACCCTGTAAGTCTCGGTTTTaGAGAGTACCCAACCAGAAAGCCTCTCTACAGTTGTTGAGGACA | + |
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Preference number: 6 (lower is better) Translates to: EGSWEIISSPCKSRF*RVPNQKASLQLLRT Trigger: TGTCCTCAACAACTGTAGAGAGGCTTTCTGGTTGGGTACTCTCAAAAACCGAGACTTACAGGGTGAAGAAATTATTTCCCAGGATCCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS CAA 90 bp | GAGGTGAGAACAGAGAGACTGGATATGGTTGCTGGTTCCGGGCTGTaGGCTAAATGCAAGAGTGCTGAGAATACAGAAGATTTTTCGTAT | + |
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Preference number: 6 (lower is better) Translates to: EVRTERLDMVAGSGL*AKCKSAENTEDFSY Trigger: ATACGAAAAATCTTCTGTATTCTCAGCACTCTTGCATTTAGCCAACAGCCCGGAACCAGCAACCATATCCAGTCTCTCTGTTCTCACCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123738.2 |
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| CDS GCA 72 bp | ACTAACAGTTCCAGTGACTTTTTGAGTAAAGGCACATaGTTGGTGAGTCTTGTGTCCTGGCGAATCTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: TNSSSDFLSKGT*LVSLVSWRILE Trigger: CTCCAAGATTCGCCAGGACACAAGACTCACCAAGCATGTGCCTTTACTCAAAAAGTCACTGGAACTGTTAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS CCA 72 bp | CAACTTCATGAGAATTGTGAGACTTCTTTGCCAGCTTaGAAAGGGGCATGGTTTTGGAGGCATCTTCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: QLHENCETSLPA*KGAWFWRHLLS Trigger: TGACAGAAGATGCCTCCAAAACCATGCCCCTTTCCAAGCTGGCAAAGAAGTCTCACAATTCTCATGAAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS CAA 72 bp | TTGAGAGTACCCAACCAGAAAGCCTCTCTACAGTTGTaGAGGACAAGCATGGCTTTGACTCTGCAAACTAAC | + |
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Preference number: 6 (lower is better) Translates to: LRVPNQKASLQL*RTSMALTLQTN Trigger: GTTAGTTTGCAGAGTCAAAGCCATGCTTGTCCTCAACAACTGTAGAGAGGCTTTCTGGTTGGGTACTCTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS GCA 72 bp | CTGGATATGGTTGCTGGTTCCGGGCTGTTGGCTAAATaGAAGAGTGCTGAGAATACAGAAGATTTTTCGTAT | + |
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Preference number: 6 (lower is better) Translates to: LDMVAGSGLLAK*KSAENTEDFSY Trigger: ATACGAAAAATCTTCTGTATTCTCAGCACTCTTGCATTTAGCCAACAGCCCGGAACCAGCAACCATATCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036340.12 ENSMUST00000123738.2 ENSMUST00000204827.3 |
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| CDS CAA 90 bp | ACGACCTCTGTAGCTTCAGTGTGCATTTCAGTGTCTAAGATGAACTaGGTCACAAGTCCAGAATGTAGAATAGAGAAGACCTCAATGTCC | + |
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Preference number: 6 (lower is better) Translates to: TTSVASVCISVSKMN*VTSPECRIEKTSMS Trigger: GGACATTGAGGTCTTCTCTATTCTACATTCTGGACTTGTGACCAAGTTCATCTTAGACACTGAAATGCACACTGAAGCTACAGAGGTCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS CAA 72 bp | TGGGAAATAATTTCTTCACCCTGTAAGTCTCGGTTTTaGAGAGTACCCAACCAGAAAGCCTCTCTACAGTTG | + |
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Preference number: 6 (lower is better) Translates to: WEIISSPCKSRF*RVPNQKASLQL Trigger: CAACTGTAGAGAGGCTTTCTGGTTGGGTACTCTCAAAAACCGAGACTTACAGGGTGAAGAAATTATTTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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| CDS CAA 90 bp | AGGACTGAATTGGATTCAGTGTGCATTTCAGTGTCTAAGATGAACTaGGTCACAAGTCCAGAATGTAGAATAGAGAAGACCTCAATGTCC | + |
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Preference number: 6 (lower is better) Translates to: RTELDSVCISVSKMN*VTSPECRIEKTSMS Trigger: GGACATTGAGGTCTTCTCTATTCTACATTCTGGACTTGTGACCAAGTTCATCTTAGACACTGAAATGCACACTGAATCCAATTCAGTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129462.3 |
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| CDS TCA 72 bp | CTGATTTTGGTTCTCTCCAGTTTTAAGAGTGAGTCCTaGAGCCTTAAGAAGCTTTACAAAGACACTGCCATT | + |
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Preference number: 6 (lower is better) Translates to: LILVLSSFKSES*SLKKLYKDTAI Trigger: AATGGCAGTGTCTTTGTAAAGCTTCTTAAGGCTTCAGGACTCACTCTTAAAACTGGAGAGAACCAAAATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036340.12 ENSMUST00000204827.3 |
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