Pregenerated sensors for FAM98C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030590Ensembl transcript IDs: ENSMUST00000123416.2, ENSMUST00000134176.8, ENSMUST00000144795.8, ENSMUST00000153251.8, ENSMUST00000164589.9
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGCCAGGCTTGCCGAGGATAACCCCTCAGTGCCTCCTGAAGGAGTaGCAGCAGCATCAGCGCCTGGCAGAATCTGCAACCGTCCCTCAA | + |
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Preference number: 1 (lower is better) Translates to: RPGLPRITPQCLLKE*QQHQRLAESATVPQ Trigger: TTGAGGGACGGTTGCAGATTCTGCCAGGCGCTGATGCTGCTGGCACTCCTTCAGGAGGCACTGAGGGGTTATCCTCGGCAAGCCTGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000134176.8 ENSMUST00000144795.8 ENSMUST00000153251.8 ENSMUST00000164589.9 |
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| 3UTR-3UTR GCA 90 bp | GGGAAGGCCAGGCTTGCCGAGGATAACCCCTCAGTGCCTCCTGAAGGAGTGCCAGCGCCTGGCAGAATCTaGAACCGTCCCTCAAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: GKARLAEDNPSVPPEGVPAPGRI*NRPSKA Trigger: GGCCTTTGAGGGACGGTTGCAGATTCTGCCAGGCGC...TGGCACTCCTTCAGGAGGCACTGAGGGGTTATCCTCGGCAAGCCTGGCCTTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000134176.8 ENSMUST00000144795.8 ENSMUST00000153251.8 ENSMUST00000164589.9 |
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| 3UTR-3UTR TCA 90 bp | ATTTATTTTTCAGACAACACGGTTCATAGTGTTGAGTGGCGGCTGGGTGTAGGGCCCCTCAGTGCCTCCTaGAGGAGTGCCAGCAGCATC | + |
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Preference number: 2 (lower is better) Translates to: IYFSDNTVHSVEWRLGVGPLSAS*RSASSI Trigger: GATGCTGCTGGCACTCCTTCAGGAGGCACTGAGGGG...CCCTACACCCAGCCGCCACTCAACACTATGAACCGTGTTGTCTGAAAAATAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000134176.8 ENSMUST00000144795.8 ENSMUST00000164589.9 |
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| 3UTR-3UTR GCA 90 bp | ATTTATTTTTCAGACAACACGGTTCATAGTGTTGAGTGGCGGCTGGGTGTAGGGGCGCCTGGCAGAATCTaGAACCGTCCCTCAAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: IYFSDNTVHSVEWRLGVGAPGRI*NRPSKA Trigger: GGCCTTTGAGGGACGGTTGCAGATTCTGCCAGGCGC...CCCTACACCCAGCCGCCACTCAACACTATGAACCGTGTTGTCTGAAAAATAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000134176.8 ENSMUST00000144795.8 ENSMUST00000164589.9 |
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| 3UTR-3UTR GCA 90 bp | ATTTATTTTTCAGACAACACGGTTCATAGTGTTGAGTGGCGGCTGGGTGTAGGGTGCCTCCTGAAGGAGTaGCAGCAGCATCAGCGCCTG | + |
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Preference number: 2 (lower is better) Translates to: IYFSDNTVHSVEWRLGVGCLLKE*QQHQRL Trigger: CAGGCGCTGATGCTGCTGGCACTCCTTCAGGAGGCA...CCCTACACCCAGCCGCCACTCAACACTATGAACCGTGTTGTCTGAAAAATAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000134176.8 ENSMUST00000144795.8 ENSMUST00000164589.9 |
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| 3UTR-3UTR GCA 90 bp | AGAACTAAATTTATTTTTCAGACAACACGGTTCATAGTGTTGAGTGGCGGCTGGTGCCTCCTGAAGGAGTaGCAGCAGCATCAGCGCCTG | + |
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Preference number: 2 (lower is better) Translates to: RTKFIFQTTRFIVLSGGWCLLKE*QQHQRL Trigger: CAGGCGCTGATGCTGCTGGCACTCCTTCAGGAGGCA...CCAGCCGCCACTCAACACTATGAACCGTGTTGTCTGAAAAATAAATTTAGTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000134176.8 ENSMUST00000144795.8 ENSMUST00000164589.9 |
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| 3UTR GCA 72 bp | TTGCCGAGGATAACCCCTCAGTGCCTCCTGAAGGAGTaGCAGCAGCATCAGCGCCTGGCAGAATCTGCAACC | + |
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Preference number: 3 (lower is better) Translates to: LPRITPQCLLKE*QQHQRLAESAT Trigger: GGTTGCAGATTCTGCCAGGCGCTGATGCTGCTGGCACTCCTTCAGGAGGCACTGAGGGGTTATCCTCGGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000134176.8 ENSMUST00000144795.8 ENSMUST00000153251.8 ENSMUST00000164589.9 |
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| 3UTR CCA 72 bp | ATTTATTTTTCAGACAACACGGTTCATAGTGTTGAGTaGCGGCTGGGTGTAGGGCATTTAGGGCCTCTAGAA | + |
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Preference number: 3 (lower is better) Translates to: IYFSDNTVHSVE*RLGVGHLGPLE Trigger: TTCTAGAGGCCCTAAATGCCCTACACCCAGCCGCCACTCAACACTATGAACCGTGTTGTCTGAAAAATAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000134176.8 ENSMUST00000144795.8 ENSMUST00000164589.9 |
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| CDS-3UTR GCA 90 bp | CCCTCAGTGCCTCCTGAAGGAGTGCCAGCAGCATCAGCGCCTGGCAGAATCTGCGCGCGATCCGGGCAGTaGAACGCCCGCAGCCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: PSVPPEGVPAASAPGRICARSGQ*NARSQP Trigger: CGGCTGGCTGCGGGCGTTGCACTGCCCGGATCGCGC...GCAGATTCTGCCAGGCGCTGATGCTGCTGGCACTCCTTCAGGAGGCACTGAGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144795.8 ENSMUST00000164589.9 |
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| CDS-3UTR GCA 90 bp | CCCTCAGTGCCTCCTGAAGGAGTGCCAGCAGCATCAGCGCCTGGCAGAATCTGCCGCCCAGCACTGCGGTaGCCTCCTCTCGCCGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSVPPEGVPAASAPGRICRPALR*PPLAAP Trigger: TGGAGCGGCGAGAGGAGGGCACCGCAGTGCTGGGCG...GCAGATTCTGCCAGGCGCTGATGCTGCTGGCACTCCTTCAGGAGGCACTGAGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144795.8 ENSMUST00000164589.9 |
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| CDS-3UTR CCA 90 bp | CCCTCAGTGCCTCCTGAAGGAGTGCCAGCAGCATCAGCGCCTGGCAGAATCTGCGCTCCCGCAGCACGGTaGCGCAGTCTCCGCCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: PSVPPEGVPAASAPGRICAPAAR*RSLRRR Trigger: TCTGCGGCGGAGACTGCGCCACCGTGCTGCGGGAGC...GCAGATTCTGCCAGGCGCTGATGCTGCTGGCACTCCTTCAGGAGGCACTGAGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144795.8 ENSMUST00000164589.9 |
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| CDS-3UTR CCA 90 bp | GGGAAGGCCAGGCTTGCCGAGGATAACCCCTCAGTGCCTCCTGAAGGAGTGCCAGCTCCCGCAGCACGGTaGCGCAGTCTCCGCCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: GKARLAEDNPSVPPEGVPAPAAR*RSLRRR Trigger: TCTGCGGCGGAGACTGCGCCACCGTGCTGCGGGAGC...TGGCACTCCTTCAGGAGGCACTGAGGGGTTATCCTCGGCAAGCCTGGCCTTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144795.8 ENSMUST00000164589.9 |
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| CDS-3UTR CCA 90 bp | CCCTCAGTGCCTCCTGAAGGAGTGCCAGCAGCATCAGCGCCTGGCAGAATCTGCTTCCACGCAGGGGTCTaGGGAGCCCCAGGGCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: PSVPPEGVPAASAPGRICFHAGV*GAPGLE Trigger: TTCAAGCCCTGGGGCTCCCCAGACCCCTGCGTGGAA...GCAGATTCTGCCAGGCGCTGATGCTGCTGGCACTCCTTCAGGAGGCACTGAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000144795.8 ENSMUST00000153251.8 ENSMUST00000164589.9 |
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| CDS-3UTR CCA 90 bp | GGGAAGGCCAGGCTTGCCGAGGATAACCCCTCAGTGCCTCCTGAAGGAGTGCCATTCATGACCTCTCCGTaGGCCTCTGCCCGGTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: GKARLAEDNPSVPPEGVPFMTSP*ASARSP Trigger: GGGTGACCGGGCAGAGGCCCACGGAGAGGTCATGAA...TGGCACTCCTTCAGGAGGCACTGAGGGGTTATCCTCGGCAAGCCTGGCCTTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134176.8 ENSMUST00000164589.9 |
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| CDS-3UTR CCA 90 bp | CCCTCAGTGCCTCCTGAAGGAGTGCCAGCAGCATCAGCGCCTGGCAGAATCTGCTTCATGACCTCTCCGTaGGCCTCTGCCCGGTCACCC | + |
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Preference number: 4 (lower is better) Translates to: PSVPPEGVPAASAPGRICFMTSP*ASARSP Trigger: GGGTGACCGGGCAGAGGCCCACGGAGAGGTCATGAA...GCAGATTCTGCCAGGCGCTGATGCTGCTGGCACTCCTTCAGGAGGCACTGAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134176.8 ENSMUST00000164589.9 |
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| CDS-3UTR TCA 90 bp | GGGAAGGCCAGGCTTGCCGAGGATAACCCCTCAGTGCCTCCTGAAGGAGTGCCAGGGAGCCCCAGGGCTTaGAGAGTTAGCGTCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GKARLAEDNPSVPPEGVPGSPRA*RVSVSS Trigger: GGAACTGACGCTAACTCTTCAAGCCCTGGGGCTCCC...TGGCACTCCTTCAGGAGGCACTGAGGGGTTATCCTCGGCAAGCCTGGCCTTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000144795.8 ENSMUST00000153251.8 ENSMUST00000164589.9 |
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| CDS-3UTR GCA 90 bp | GGGAAGGCCAGGCTTGCCGAGGATAACCCCTCAGTGCCTCCTGAAGGAGTGCCACGGCGGCAGCAGTACTaGTCTGTCAGGCTTTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: GKARLAEDNPSVPPEGVPRRQQY*SVRLWD Trigger: GTCCCAAAGCCTGACAGAGCAGTACTGCTGCCGCCG...TGGCACTCCTTCAGGAGGCACTGAGGGGTTATCCTCGGCAAGCCTGGCCTTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000134176.8 ENSMUST00000144795.8 ENSMUST00000164589.9 |
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| CDS-3UTR CCA 90 bp | GGGAAGGCCAGGCTTGCCGAGGATAACCCCTCAGTGCCTCCTGAAGGAGTGCCAAGCCACACTGGTAGCTaGGACCAGGCGGGAAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: GKARLAEDNPSVPPEGVPSHTGS*DQAGKV Trigger: GACCTTTCCCGCCTGGTCCCAGCTACCAGTGTGGCT...TGGCACTCCTTCAGGAGGCACTGAGGGGTTATCCTCGGCAAGCCTGGCCTTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000134176.8 ENSMUST00000153251.8 ENSMUST00000164589.9 |
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| CDS-3UTR CCA 90 bp | CCCTCAGTGCCTCCTGAAGGAGTGCCAGCAGCATCAGCGCCTGGCAGAATCTGCTGCTCTGTCAGGCTTTaGGACAGAGACTCCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: PSVPPEGVPAASAPGRICCSVRL*DRDSRA Trigger: GGCCCTGGAGTCTCTGTCCCAAAGCCTGACAGAGCA...GCAGATTCTGCCAGGCGCTGATGCTGCTGGCACTCCTTCAGGAGGCACTGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134176.8 |
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| CDS-3UTR CCA 90 bp | GGGAAGGCCAGGCTTGCCGAGGATAACCCCTCAGTGCCTCCTGAAGGAGTGCCAGCCCGGTCACCCCAGTaGAAAGCAGATGTTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKARLAEDNPSVPPEGVPARSPQ*KADVVR Trigger: CCTCACAACATCTGCTTTCCACTGGGGTGACCGGGC...TGGCACTCCTTCAGGAGGCACTGAGGGGTTATCCTCGGCAAGCCTGGCCTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000134176.8 ENSMUST00000144795.8 ENSMUST00000164589.9 |
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| CDS-3UTR CCA 90 bp | CCCTCAGTGCCTCCTGAAGGAGTGCCAGCAGCATCAGCGCCTGGCAGAATCTGCGCCCGGTCACCCCAGTaGAAAGCAGATGTTGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: PSVPPEGVPAASAPGRICARSPQ*KADVVR Trigger: CCTCACAACATCTGCTTTCCACTGGGGTGACCGGGC...GCAGATTCTGCCAGGCGCTGATGCTGCTGGCACTCCTTCAGGAGGCACTGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000134176.8 ENSMUST00000144795.8 ENSMUST00000164589.9 |
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| CDS-3UTR GCA 90 bp | CCCTCAGTGCCTCCTGAAGGAGTGCCAGCAGCATCAGCGCCTGGCAGAATCTGCACTTCTTCTTCTTTCTaGGGCCCCAGCGCTGTTGGC | + |
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Preference number: 4 (lower is better) Translates to: PSVPPEGVPAASAPGRICTSSSF*GPSAVG Trigger: GCCAACAGCGCTGGGGCCGCAGAAAGAAGAAGAAGT...GCAGATTCTGCCAGGCGCTGATGCTGCTGGCACTCCTTCAGGAGGCACTGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000134176.8 ENSMUST00000144795.8 ENSMUST00000153251.8 ENSMUST00000164589.9 |
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| CDS-3UTR GCA 90 bp | GGGAAGGCCAGGCTTGCCGAGGATAACCCCTCAGTGCCTCCTGAAGGAGTGCCAACTTCTTCTTCTTTCTaGGGCCCCAGCGCTGTTGGC | + |
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Preference number: 4 (lower is better) Translates to: GKARLAEDNPSVPPEGVPTSSSF*GPSAVG Trigger: GCCAACAGCGCTGGGGCCGCAGAAAGAAGAAGAAGT...TGGCACTCCTTCAGGAGGCACTGAGGGGTTATCCTCGGCAAGCCTGGCCTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000134176.8 ENSMUST00000144795.8 ENSMUST00000153251.8 ENSMUST00000164589.9 |
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| CDS-3UTR CCA 90 bp | GGGAAGGCCAGGCTTGCCGAGGATAACCCCTCAGTGCCTCCTGAAGGAGTGCCAAAGAGGCGGGCAGCCTaGAGCTCAGAGCAAAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: GKARLAEDNPSVPPEGVPKRRAA*SSEQRN Trigger: GTTTCTTTGCTCTGAGCTCCAGGCTGCCCGCCTCTT...TGGCACTCCTTCAGGAGGCACTGAGGGGTTATCCTCGGCAAGCCTGGCCTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000144795.8 ENSMUST00000153251.8 ENSMUST00000164589.9 |
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| CDS-3UTR CCA 90 bp | CCCTCAGTGCCTCCTGAAGGAGTGCCAGCAGCATCAGCGCCTGGCAGAATCTGCTGCTCTGTCAGGCTTTaGGACAGAGACTCCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: PSVPPEGVPAASAPGRICCSVRL*DRDSRA Trigger: AGCCCTGGAGTCTCTGTCCCAAAGCCTGACAGAGCA...GCAGATTCTGCCAGGCGCTGATGCTGCTGGCACTCCTTCAGGAGGCACTGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144795.8 ENSMUST00000164589.9 |
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| CDS-3UTR TCA 90 bp | CCCTCAGTGCCTCCTGAAGGAGTGCCAGCAGCATCAGCGCCTGGCAGAATCTGCAGGGCTTCCTTGTCATaGAACTCCCGAAGTAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PSVPPEGVPAASAPGRICRASLS*NSRSSW Trigger: CCAGCTACTTCGGGAGTTTCATGACAAGGAAGCCCT...GCAGATTCTGCCAGGCGCTGATGCTGCTGGCACTCCTTCAGGAGGCACTGAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144795.8 |
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| CDS-3UTR GCA 90 bp | CCCTCAGTGCCTCCTGAAGGAGTGCCAGCAGCATCAGCGCCTGGCAGAATCTGCGGCAGCCAGAACATGTaGGATAGAGACATCAGATTC | + |
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Preference number: 4 (lower is better) Translates to: PSVPPEGVPAASAPGRICGSQNM*DRDIRF Trigger: GAATCTGATGTCTCTATCGCACATGTTCTGGCTGCC...GCAGATTCTGCCAGGCGCTGATGCTGCTGGCACTCCTTCAGGAGGCACTGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000134176.8 ENSMUST00000153251.8 ENSMUST00000164589.9 |
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| CDS-3UTR GCA 90 bp | GGGAAGGCCAGGCTTGCCGAGGATAACCCCTCAGTGCCTCCTGAAGGAGTGCCAGGCAGCCAGAACATGTaGGATAGAGACATCAGATTC | + |
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Preference number: 4 (lower is better) Translates to: GKARLAEDNPSVPPEGVPGSQNM*DRDIRF Trigger: GAATCTGATGTCTCTATCGCACATGTTCTGGCTGCC...TGGCACTCCTTCAGGAGGCACTGAGGGGTTATCCTCGGCAAGCCTGGCCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000134176.8 ENSMUST00000153251.8 ENSMUST00000164589.9 |
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| CDS-3UTR CCA 90 bp | CCCTCAGTGCCTCCTGAAGGAGTGCCAGCAGCATCAGCGCCTGGCAGAATCTGCAGAGACATCAGATTCTaGAGTCAGAAGCCCTCGGAT | + |
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Preference number: 4 (lower is better) Translates to: PSVPPEGVPAASAPGRICRDIRF*SQKPSD Trigger: ATCCGAGGGCTTCTGACTCCAGAATCTGATGTCTCT...GCAGATTCTGCCAGGCGCTGATGCTGCTGGCACTCCTTCAGGAGGCACTGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000134176.8 ENSMUST00000153251.8 ENSMUST00000164589.9 |
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| CDS-3UTR GCA 90 bp | AGAACTAAATTTATTTTTCAGACAACACGGTTCATAGTGTTGAGTGGCGGCTGGGCGCGATCCGGGCAGTaGAACGCCCGCAGCCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: RTKFIFQTTRFIVLSGGWARSGQ*NARSQP Trigger: CGGCTGGCTGCGGGCGTTGCACTGCCCGGATCGCGC...CCAGCCGCCACTCAACACTATGAACCGTGTTGTCTGAAAAATAAATTTAGTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144795.8 ENSMUST00000164589.9 |
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| CDS-3UTR GCA 90 bp | AGAACTAAATTTATTTTTCAGACAACACGGTTCATAGTGTTGAGTGGCGGCTGGCGCCCAGCACTGCGGTaGCCTCCTCTCGCCGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RTKFIFQTTRFIVLSGGWRPALR*PPLAAP Trigger: TGGAGCGGCGAGAGGAGGGCACCGCAGTGCTGGGCG...CCAGCCGCCACTCAACACTATGAACCGTGTTGTCTGAAAAATAAATTTAGTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144795.8 ENSMUST00000164589.9 |
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| CDS-3UTR CCA 90 bp | ATTTATTTTTCAGACAACACGGTTCATAGTGTTGAGTGGCGGCTGGGTGTAGGGTTCCACGCAGGGGTCTaGGGAGCCCCAGGGCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: IYFSDNTVHSVEWRLGVGFHAGV*GAPGLE Trigger: TTCAAGCCCTGGGGCTCCCCAGACCCCTGCGTGGAA...CCCTACACCCAGCCGCCACTCAACACTATGAACCGTGTTGTCTGAAAAATAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000144795.8 ENSMUST00000164589.9 |
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| CDS-3UTR TCA 90 bp | ATTTATTTTTCAGACAACACGGTTCATAGTGTTGAGTGGCGGCTGGGTGTAGGGGGGAGCCCCAGGGCTTaGAGAGTTAGCGTCAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: IYFSDNTVHSVEWRLGVGGSPRA*RVSVSS Trigger: GGAACTGACGCTAACTCTTCAAGCCCTGGGGCTCCC...CCCTACACCCAGCCGCCACTCAACACTATGAACCGTGTTGTCTGAAAAATAAAT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000144795.8 ENSMUST00000164589.9 |
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| CDS-3UTR CCA 90 bp | ATTTATTTTTCAGACAACACGGTTCATAGTGTTGAGTGGCGGCTGGGTGTAGGGAGCCACACTGGTAGCTaGGACCAGGCGGGAAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: IYFSDNTVHSVEWRLGVGSHTGS*DQAGKV Trigger: GACCTTTCCCGCCTGGTCCCAGCTACCAGTGTGGCT...CCCTACACCCAGCCGCCACTCAACACTATGAACCGTGTTGTCTGAAAAATAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000134176.8 ENSMUST00000164589.9 |
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| CDS-3UTR GCA 90 bp | ATTTATTTTTCAGACAACACGGTTCATAGTGTTGAGTGGCGGCTGGGTGTAGGGACTTCTTCTTCTTTCTaGGGCCCCAGCGCTGTTGGC | + |
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Preference number: 4 (lower is better) Translates to: IYFSDNTVHSVEWRLGVGTSSSF*GPSAVG Trigger: GCCAACAGCGCTGGGGCCGCAGAAAGAAGAAGAAGT...CCCTACACCCAGCCGCCACTCAACACTATGAACCGTGTTGTCTGAAAAATAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000134176.8 ENSMUST00000144795.8 ENSMUST00000164589.9 |
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| CDS-3UTR CCA 90 bp | ATTTATTTTTCAGACAACACGGTTCATAGTGTTGAGTGGCGGCTGGGTGTAGGGAAGAGGCGGGCAGCCTaGAGCTCAGAGCAAAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: IYFSDNTVHSVEWRLGVGKRRAA*SSEQRN Trigger: GTTTCTTTGCTCTGAGCTCCAGGCTGCCCGCCTCTT...CCCTACACCCAGCCGCCACTCAACACTATGAACCGTGTTGTCTGAAAAATAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144795.8 ENSMUST00000164589.9 |
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| CDS-3UTR CCA 90 bp | ATTTATTTTTCAGACAACACGGTTCATAGTGTTGAGTGGCGGCTGGGTGTAGGGTGCTCTGTCAGGCTTTaGGACAGAGACTCCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: IYFSDNTVHSVEWRLGVGCSVRL*DRDSRA Trigger: AGCCCTGGAGTCTCTGTCCCAAAGCCTGACAGAGCA...CCCTACACCCAGCCGCCACTCAACACTATGAACCGTGTTGTCTGAAAAATAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144795.8 ENSMUST00000164589.9 |
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| CDS-3UTR GCA 90 bp | AGAACTAAATTTATTTTTCAGACAACACGGTTCATAGTGTTGAGTGGCGGCTGGCGGCGGCAGCAGTACTaGTCTGTCAGGCTTTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: RTKFIFQTTRFIVLSGGWRRQQY*SVRLWD Trigger: GTCCCAAAGCCTGACAGAGCAGTACTGCTGCCGCCG...CCAGCCGCCACTCAACACTATGAACCGTGTTGTCTGAAAAATAAATTTAGTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000134176.8 ENSMUST00000144795.8 ENSMUST00000164589.9 |
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| CDS-3UTR GCA 90 bp | ATTTATTTTTCAGACAACACGGTTCATAGTGTTGAGTGGCGGCTGGGTGTAGGGGGCAGCCAGAACATGTaGGATAGAGACATCAGATTC | + |
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Preference number: 4 (lower is better) Translates to: IYFSDNTVHSVEWRLGVGGSQNM*DRDIRF Trigger: GAATCTGATGTCTCTATCGCACATGTTCTGGCTGCC...CCCTACACCCAGCCGCCACTCAACACTATGAACCGTGTTGTCTGAAAAATAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000134176.8 ENSMUST00000164589.9 |
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| CDS TCA 90 bp | CTCCCAGAGCCGTCAGCTCGGCCGCCAGCCGCGCGCACAGCGCCCTaGAGTCTGCACACGCGGGACCCCGAGACGCCCCCTCCGGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: LPEPSARPPAARTAP*SLHTRDPETPPPGG Trigger: CCCTCCCGGAGGGGGCGTCTCGGGGTCCCGCGTGTGCAGACTTCAGGGCGCTGTGCGCGCGGCTGGCGGCCGAGCTGACGGCTCTGGGAG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144795.8 ENSMUST00000164589.9 |
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| CDS CCA 90 bp | GAAACCGCAGCAGACGCAGGCCGCCGCCGGGCTCCCGCAGCACGGTaGCGCAGTCTCCGCCGCAGAGCGCGCGATCCGGGCAGTGCAACG | + |
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Preference number: 5 (lower is better) Translates to: ETAADAGRRRAPAAR*RSLRRRARDPGSAT Trigger: CGTTGCACTGCCCGGATCGCGCGCTCTGCGGCGGAGACTGCGCCACCGTGCTGCGGGAGCCCGGCGGCGGCCTGCGTCTGCTGCGGTTTC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144795.8 ENSMUST00000164589.9 |
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| CDS GCA 90 bp | AGCCGTCAGCTCGGCCGCCAGCCGCGCGCACAGCGCCCTGAAGTCTaGACACGCGGGACCCCGAGACGCCCCCTCCGGGAGGGCATCGTA | + |
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Preference number: 5 (lower is better) Translates to: SRQLGRQPRAQRPEV*TRGTPRRPLREGIV Trigger: TACGATGCCCTCCCGGAGGGGGCGTCTCGGGGTCCCGCGTGTGCAGACTTCAGGGCGCTGTGCGCGCGGCTGGCGGCCGAGCTGACGGCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144795.8 ENSMUST00000164589.9 |
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| CDS GCA 90 bp | AGCACGGTGGCGCAGTCTCCGCCGCAGAGCGCGCGATCCGGGCAGTaGAACGCCCGCAGCCAGCCGGCCAACTGCCGCAGGAACTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: STVAQSPPQSARSGQ*NARSQPANCRRNSS Trigger: GGAAGAGTTCCTGCGGCAGTTGGCCGGCTGGCTGCGGGCGTTGCACTGCCCGGATCGCGCGCTCTGCGGCGGAGACTGCGCCACCGTGCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144795.8 ENSMUST00000164589.9 |
||
| CDS CCA 90 bp | GGGCTAGAATCCCGCTGGAGCCTTAGATGCAAGAGGCGGGCAGCCTaGAGCTCAGAGCAAAGAAACCGCAGCAGACGCAGGCCGCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GLESRWSLRCKRRAA*SSEQRNRSRRRPPP Trigger: CGGCGGCGGCCTGCGTCTGCTGCGGTTTCTTTGCTCTGAGCTCCAGGCTGCCCGCCTCTTGCATCTAAGGCTCCAGCGGGATTCTAGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000144795.8 ENSMUST00000153251.8 ENSMUST00000164589.9 |
||
| CDS GCA 90 bp | CTTTGGGACAGAGACTCCAGGGCTTCCCATCGGGATGCATCCAGCTaGGAGTTAAGGAGGGGCTTCATGGACTCCGGGGGCAGGGACGGC | + |
|
Preference number: 5 (lower is better) Translates to: LWDRDSRASHRDASS*ELRRGFMDSGGRDG Trigger: GCCGTCCCTGCCCCCGGAGTCCATGAAGCCCCTCCTTAACTCGCAGCTGGATGCATCCCGATGGGAAGCCCTGGAGTCTCTGTCCCAAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164589.9 |
||
| CDS GCA 90 bp | TCGGATTGGGGACAGCACCGCCTTCATGACCTCTCCGTGGGCCTCTaGCCGGTCACCCCAGTGGAAAGCAGATGTTGTGAGGTCAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SDWGQHRLHDLSVGL*PVTPVESRCCEVKA Trigger: CGCCTTGACCTCACAACATCTGCTTTCCACTGGGGTGACCGGGCAGAGGCCCACGGAGAGGTCATGAAGGCGGTGCTGTCCCCAATCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134176.8 ENSMUST00000164589.9 |
||
| CDS CCA 90 bp | GGGCTAGAATCCCGCTGGAGCCTTAGATGCAAGAGGCGGGCAGCCTaGAGCTCAGAGCAAAGAAACCCTGCGGCCTTCAAGCTCGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: GLESRWSLRCKRRAA*SSEQRNPAAFKLAA Trigger: TGCGGCGAGCTTGAAGGCCGCAGGGTTTCTTTGCTCTGAGCTCCAGGCTGCCCGCCTCTTGCATCTAAGGCTCCAGCGGGATTCTAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123416.2 |
||
| CDS CCA 90 bp | ACCGCCTTCATGACCTCTCCGTGGGCCTCTGCCCGGTCACCCCAGTaGAAAGCAGATGTTGTGAGGTCAAGGCGCTTCAGGAGGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TAFMTSPWASARSPQ*KADVVRSRRFRRRQ Trigger: CTGCCTCCTCCTGAAGCGCCTTGACCTCACAACATCTGCTTTCCACTGGGGTGACCGGGCAGAGGCCCACGGAGAGGTCATGAAGGCGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134176.8 ENSMUST00000164589.9 |
||
| CDS CCA 90 bp | AGAAGCCCTCGGATTGGGGACAGCACCGCCTTCATGACCTCTCCGTaGGCCTCTGCCCGGTCACCCCAGTGGAAAGCAGATGTTGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSPRIGDSTAFMTSP*ASARSPQWKADVVR Trigger: CCTCACAACATCTGCTTTCCACTGGGGTGACCGGGCAGAGGCCCACGGAGAGGTCATGAAGGCGGTGCTGTCCCCAATCCGAGGGCTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134176.8 ENSMUST00000164589.9 |
||
| CDS CCA 90 bp | TTCAGGAGGAGGCAGCGGCGGCAGCAGTACTGCTCTGTCAGGCTTTaGGACAGAGACTCCAGGGCTTCCCATCGGGATGCATCCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FRRRQRRQQYCSVRL*DRDSRASHRDASSC Trigger: GCAGCTGGATGCATCCCGATGGGAAGCCCTGGAGTCTCTGTCCCAAAGCCTGACAGAGCAGTACTGCTGCCGCCGCTGCCTCCTCCTGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164589.9 |
||
| CDS-3UTR CAA 90 bp | CCCTCAGTGCCTCCTGAAGGAGTGCCAGCAGCATCAGCGCCTGGCAGAATCTGCTCAGAAGCCCTCGGATaGGGGACAGCACCGCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PSVPPEGVPAASAPGRICSEALG*GTAPPS Trigger: TGAAGGCGGTGCTGTCCCCAATCCGAGGGCTTCTGA...GCAGATTCTGCCAGGCGCTGATGCTGCTGGCACTCCTTCAGGAGGCACTGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000134176.8 ENSMUST00000153251.8 ENSMUST00000164589.9 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGCCAGGCTTGCCGAGGATAACCCCTCAGTGCCTCCTGAAGGAGTGCCATCAGAAGCCCTCGGATaGGGGACAGCACCGCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GKARLAEDNPSVPPEGVPSEALG*GTAPPS Trigger: TGAAGGCGGTGCTGTCCCCAATCCGAGGGCTTCTGA...TGGCACTCCTTCAGGAGGCACTGAGGGGTTATCCTCGGCAAGCCTGGCCTTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000134176.8 ENSMUST00000153251.8 ENSMUST00000164589.9 |
||
| CDS TCA 90 bp | ATGGACTCCGGGGGCAGGGACGGCAGCAGCTCAGAGATCTTGTCATaGAACTCCCGAAGTAGCTGGCTAGCCAGGGTTCCACGCAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: MDSGGRDGSSSEILS*NSRSSWLARVPRRG Trigger: ACCCCTGCGTGGAACCCTGGCTAGCCAGCTACTTCGGGAGTTTCATGACAAGATCTCTGAGCTGCTGCCGTCCCTGCCCCCGGAGTCCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000123416.2 ENSMUST00000153251.8 ENSMUST00000164589.9 |
||
| CDS GCA 90 bp | CTCTGTCAGGCTTTGGGACAGAGACTCCAGGGCTTCCCATCGGGATaGATCCAGCTGCGAGTTAAGGAGGGGCTTCATGGACTCCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LCQALGQRLQGFPSG*IQLRVKEGLHGLRG Trigger: CCCCCGGAGTCCATGAAGCCCCTCCTTAACTCGCAGCTGGATGCATCCCGATGGGAAGCCCTGGAGTCTCTGTCCCAAAGCCTGACAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164589.9 |
||
| CDS CCA 90 bp | CGGTCTGGCACATCACCCATAAGCACCTCTGCCCGGTCACCCCAGTaGAAAGCAGATGTTGTGAGGTCAAGGCGCTTCAGGAGGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RSGTSPISTSARSPQ*KADVVRSRRFRRRQ Trigger: CTGCCTCCTCCTGAAGCGCCTTGACCTCACAACATCTGCTTTCCACTGGGGTGACCGGGCAGAGGTGCTTATGGGTGATGTGCCAGACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144795.8 |
||
| CDS GCA 90 bp | TCTCCAAAGGATGGCACAGGGCTAGAATCCCGCTGGAGCCTTAGATaGAAGAGGCGGGCAGCCTGGAGCTCAGAGCAAAGAAACCCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SPKDGTGLESRWSLR*KRRAAWSSEQRNPA Trigger: CGCAGGGTTTCTTTGCTCTGAGCTCCAGGCTGCCCGCCTCTTGCATCTAAGGCTCCAGCGGGATTCTAGCCCTGTGCCATCCTTTGGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123416.2 |
||
| CDS GCA 90 bp | TCTCCAAAGGATGGCACAGGGCTAGAATCCCGCTGGAGCCTTAGATaGAAGAGGCGGGCAGCCTGGAGCTCAGAGCAAAGAAACCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPKDGTGLESRWSLR*KRRAAWSSEQRNRS Trigger: GCTGCGGTTTCTTTGCTCTGAGCTCCAGGCTGCCCGCCTCTTGCATCTAAGGCTCCAGCGGGATTCTAGCCCTGTGCCATCCTTTGGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000144795.8 ENSMUST00000153251.8 ENSMUST00000164589.9 |
||
| CDS CCA 90 bp | ATGTGCGATAGAGACATCAGATTCTGGAGTCAGAAGCCCTCGGATTaGGGACAGCACCGCCTTCATGACCTCTCCGTGGGCCTCTGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: MCDRDIRFWSQKPSD*GQHRLHDLSVGLCP Trigger: CGGGCAGAGGCCCACGGAGAGGTCATGAAGGCGGTGCTGTCCCCAATCCGAGGGCTTCTGACTCCAGAATCTGATGTCTCTATCGCACAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134176.8 ENSMUST00000164589.9 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGCCAGGCTTGCCGAGGATAACCCCTCAGTGCCTCCTGAAGGAGTGCCACGCCATTCGCCTTCTTaGTCCCTTCTCCAAAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: GKARLAEDNPSVPPEGVPRHSPS*SLLQRM Trigger: CATCCTTTGGAGAAGGGACAAAGAAGGCGAATGGCG...TGGCACTCCTTCAGGAGGCACTGAGGGGTTATCCTCGGCAAGCCTGGCCTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000144795.8 ENSMUST00000153251.8 ENSMUST00000164589.9 |
||
| CDS TCA 90 bp | TGCTCTGTCAGGCTTTGGGACAGAGACTCCAGGGCTTCCTTGTCATaGAACTCCCGAAGTAGCTGGCTAGCCAGGGTTCCACGCAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CSVRLWDRDSRASLS*NSRSSWLARVPRRG Trigger: ACCCCTGCGTGGAACCCTGGCTAGCCAGCTACTTCGGGAGTTTCATGACAAGGAAGCCCTGGAGTCTCTGTCCCAAAGCCTGACAGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144795.8 |
||
| CDS CCA 90 bp | ATGTGCGATAGAGACATCAGATTCTGGAGTCAGAAGCCCTCGGATTaGGGACAGCACCGCCTTCATGACCTCTCCGTGGGCCCATCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: MCDRDIRFWSQKPSD*GQHRLHDLSVGPSG Trigger: TCCCGATGGGCCCACGGAGAGGTCATGAAGGCGGTGCTGTCCCCAATCCGAGGGCTTCTGACTCCAGAATCTGATGTCTCTATCGCACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153251.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCAGTGCCTCCTGAAGGAGTGCCAGCAGCATCAGCGCCTGGCAGAATCTGCCCCATAAGCACCTTGTaGATTGCACAACTGGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PSVPPEGVPAASAPGRICPISTL*IAQLVP Trigger: AGGGACCAGTTGTGCAATCAACAAGGTGCTTATGGG...GCAGATTCTGCCAGGCGCTGATGCTGCTGGCACTCCTTCAGGAGGCACTGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000134176.8 ENSMUST00000153251.8 ENSMUST00000164589.9 |
||
| CDS CCA 90 bp | TTCTTTGTCCCTTCTCCAAAGGATGGCACAGGGCTAGAATCCCGCTaGAGCCTTAGATGCAAGAGGCGGGCAGCCTGGAGCTCAGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: FFVPSPKDGTGLESR*SLRCKRRAAWSSEQ Trigger: TTGCTCTGAGCTCCAGGCTGCCCGCCTCTTGCATCTAAGGCTCCAGCGGGATTCTAGCCCTGTGCCATCCTTTGGAGAAGGGACAAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000123416.2 ENSMUST00000144795.8 ENSMUST00000153251.8 ENSMUST00000164589.9 |
||
| CDS CCA 90 bp | GTCAGCTCGGGCAGCCAGAACATGTGCGATAGAGACATCAGATTCTaGAGTCAGAAGCCCTCGGATTGGGGACAGCACCGCCTTCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: VSSGSQNMCDRDIRF*SQKPSDWGQHRLHD Trigger: GTCATGAAGGCGGTGCTGTCCCCAATCCGAGGGCTTCTGACTCCAGAATCTGATGTCTCTATCGCACATGTTCTGGCTGCCCGAGCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000134176.8 ENSMUST00000153251.8 ENSMUST00000164589.9 |
||
| CDS-3UTR CAA 90 bp | ATTTATTTTTCAGACAACACGGTTCATAGTGTTGAGTGGCGGCTGGGTGTAGGGCGCCATTCGCCTTCTTaGTCCCTTCTCCAAAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: IYFSDNTVHSVEWRLGVGRHSPS*SLLQRM Trigger: CATCCTTTGGAGAAGGGACAAAGAAGGCGAATGGCG...CCCTACACCCAGCCGCCACTCAACACTATGAACCGTGTTGTCTGAAAAATAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144795.8 ENSMUST00000164589.9 |
||
| CDS-3UTR CAA 90 bp | AGAACTAAATTTATTTTTCAGACAACACGGTTCATAGTGTTGAGTGGCGGCTGGCGCCATTCGCCTTCTTaGTCCCTTCTCCAAAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RTKFIFQTTRFIVLSGGWRHSPS*SLLQRM Trigger: CATCCTTTGGAGAAGGGACAAAGAAGGCGAATGGCG...CCAGCCGCCACTCAACACTATGAACCGTGTTGTCTGAAAAATAAATTTAGTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144795.8 ENSMUST00000164589.9 |
||
| CDS-3UTR CAA 90 bp | AGAACTAAATTTATTTTTCAGACAACACGGTTCATAGTGTTGAGTGGCGGCTGGCCCATAAGCACCTTGTaGATTGCACAACTGGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RTKFIFQTTRFIVLSGGWPISTL*IAQLVP Trigger: AGGGACCAGTTGTGCAATCAACAAGGTGCTTATGGG...CCAGCCGCCACTCAACACTATGAACCGTGTTGTCTGAAAAATAAATTTAGTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000134176.8 ENSMUST00000164589.9 |
||
| CDS GCA 72 bp | CTCGGCCGCCAGCCGCGCGCACAGCGCCCTGAAGTCTaGACACGCGGGACCCCGAGACGCCCCCTCCGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LGRQPRAQRPEV*TRGTPRRPLRE Trigger: CTCCCGGAGGGGGCGTCTCGGGGTCCCGCGTGTGCAGACTTCAGGGCGCTGTGCGCGCGGCTGGCGGCCGAG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144795.8 ENSMUST00000164589.9 |
||
| CDS TCA 72 bp | CCGTCAGCTCGGCCGCCAGCCGCGCGCACAGCGCCCTaGAGTCTGCACACGCGGGACCCCGAGACGCCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PSARPPAARTAP*SLHTRDPETPP Trigger: AGGGGGCGTCTCGGGGTCCCGCGTGTGCAGACTTCAGGGCGCTGTGCGCGCGGCTGGCGGCCGAGCTGACGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144795.8 ENSMUST00000164589.9 |
||
| CDS GCA 72 bp | CTGTGTCCGGGCCGTGGCCGGCGCCCAGCACTGCGGTaGCCTCCTCTCGCCGCTCCAGAGCTCCCAGAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LCPGRGRRPALR*PPLAAPELPEP Trigger: CGGCTCTGGGAGCTCTGGAGCGGCGAGAGGAGGGCACCGCAGTGCTGGGCGCCGGCCACGGCCCGGACACAG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144795.8 ENSMUST00000164589.9 |
||
| CDS GCA 72 bp | GCGCAGTCTCCGCCGCAGAGCGCGCGATCCGGGCAGTaGAACGCCCGCAGCCAGCCGGCCAACTGCCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AQSPPQSARSGQ*NARSQPANCRR Trigger: CCTGCGGCAGTTGGCCGGCTGGCTGCGGGCGTTGCACTGCCCGGATCGCGCGCTCTGCGGCGGAGACTGCGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144795.8 ENSMUST00000164589.9 |
||
| CDS GCA 72 bp | TTCCTCTGTGTCCGGGCCGTGGCCGGCGCCCAGCACTaGGGTGCCCTCCTCTCGCCGCTCCAGAGCTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FLCVRAVAGAQH*GALLSPLQSSQ Trigger: CTGGGAGCTCTGGAGCGGCGAGAGGAGGGCACCGCAGTGCTGGGCGCCGGCCACGGCCCGGACACAGAGGAA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144795.8 ENSMUST00000164589.9 |
||
| CDS GCA 72 bp | ATGACCTCTCCGTGGGCCCATCGGGATGCATCCAGCTaGGAGTTAAGGAGGGGCTTCATGGACTCCGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: MTSPWAHRDASS*ELRRGFMDSGG Trigger: GCCCCCGGAGTCCATGAAGCCCCTCCTTAACTCGCAGCTGGATGCATCCCGATGGGCCCACGGAGAGGTCAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123416.2 ENSMUST00000153251.8 |
||
| CDS CAA 90 bp | CTTCAGGAGGAGGCAGCGGCGGCAGCAGTACTGCTCTGTCAGGCTTaGGGACAGAGACTCCAGGGCTTCCCATCGGGATGCATCCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LQEEAAAAAVLLCQA*GQRLQGFPSGCIQL Trigger: CAGCTGGATGCATCCCGATGGGAAGCCCTGGAGTCTCTGTCCCAAAGCCTGACAGAGCAGTACTGCTGCCGCCGCTGCCTCCTCCTGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164589.9 |
||
| CDS GCA 72 bp | GAGGCGGGCAGCCTGGAGCTCAGAGCAAAGAAACCCTaGGGCCTTCAAGCTCGCCGCAAAGCTTTGGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: EAGSLELRAKKP*GLQARRKALAT Trigger: TGTGGCCAAAGCTTTGCGGCGAGCTTGAAGGCCGCAGGGTTTCTTTGCTCTGAGCTCCAGGCTGCCCGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123416.2 |
||
| CDS GCA 72 bp | GGACAGCACCGCCTTCATGACCTCTCCGTGGGCCTCTaGCCGGTCACCCCAGTGGAAAGCAGATGTTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GQHRLHDLSVGL*PVTPVESRCCE Trigger: CTCACAACATCTGCTTTCCACTGGGGTGACCGGGCAGAGGCCCACGGAGAGGTCATGAAGGCGGTGCTGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134176.8 ENSMUST00000164589.9 |
||
| CDS GCA 72 bp | AGAGACTCCAGGGCTTCCCATCGGGATGCATCCAGCTaGGAGTTAAGGAGGGGCTTCATGGACTCCGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RDSRASHRDASS*ELRRGFMDSGG Trigger: GCCCCCGGAGTCCATGAAGCCCCTCCTTAACTCGCAGCTGGATGCATCCCGATGGGAAGCCCTGGAGTCTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164589.9 |
||
| CDS CCA 72 bp | TCCCGCTGGAGCCTTAGATGCAAGAGGCGGGCAGCCTaGAGCTCAGAGCAAAGAAACCGCAGCAGACGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SRWSLRCKRRAA*SSEQRNRSRRR Trigger: CCTGCGTCTGCTGCGGTTTCTTTGCTCTGAGCTCCAGGCTGCCCGCCTCTTGCATCTAAGGCTCCAGCGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000144795.8 ENSMUST00000153251.8 ENSMUST00000164589.9 |
||
| CDS CCA 72 bp | AGGCAGCGGCGGCAGCAGTACTGCTCTGTCAGGCTTTaGGACAGAGACTCCAGGGCTTCCCATCGGGATGCA | + |
|
Preference number: 6 (lower is better) Translates to: RQRRQQYCSVRL*DRDSRASHRDA Trigger: TGCATCCCGATGGGAAGCCCTGGAGTCTCTGTCCCAAAGCCTGACAGAGCAGTACTGCTGCCGCCGCTGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164589.9 |
||
| CDS CCA 72 bp | TCCCGCTGGAGCCTTAGATGCAAGAGGCGGGCAGCCTaGAGCTCAGAGCAAAGAAACCCTGCGGCCTTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SRWSLRCKRRAA*SSEQRNPAAFK Trigger: CTTGAAGGCCGCAGGGTTTCTTTGCTCTGAGCTCCAGGCTGCCCGCCTCTTGCATCTAAGGCTCCAGCGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123416.2 |
||
| CDS CCA 72 bp | ATGACCTCTCCGTGGGCCTCTGCCCGGTCACCCCAGTaGAAAGCAGATGTTGTGAGGTCAAGGCGCTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: MTSPWASARSPQ*KADVVRSRRFR Trigger: CCTGAAGCGCCTTGACCTCACAACATCTGCTTTCCACTGGGGTGACCGGGCAGAGGCCCACGGAGAGGTCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134176.8 ENSMUST00000164589.9 |
||
| CDS TCA 72 bp | GGGGGCAGGGACGGCAGCAGCTCAGAGATCTTGTCATaGAACTCCCGAAGTAGCTGGCTAGCCAGGGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GGRDGSSSEILS*NSRSSWLARVP Trigger: TGGAACCCTGGCTAGCCAGCTACTTCGGGAGTTTCATGACAAGATCTCTGAGCTGCTGCCGTCCCTGCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000123416.2 ENSMUST00000153251.8 ENSMUST00000164589.9 |
||
| CDS GCA 72 bp | GATGGCACAGGGCTAGAATCCCGCTGGAGCCTTAGATaGAAGAGGCGGGCAGCCTGGAGCTCAGAGCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: DGTGLESRWSLR*KRRAAWSSEQR Trigger: TCTTTGCTCTGAGCTCCAGGCTGCCCGCCTCTTGCATCTAAGGCTCCAGCGGGATTCTAGCCCTGTGCCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000123416.2 ENSMUST00000144795.8 ENSMUST00000153251.8 ENSMUST00000164589.9 |
||
| CDS CAA 72 bp | CCCCCACGGTCTGGCACATCACCCATAAGCACCTTGTaGATTGCACAACTGGTCCCTCGTCGGGCAGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: PPRSGTSPISTL*IAQLVPRRAAT Trigger: TGTGGCTGCCCGACGAGGGACCAGTTGTGCAATCAACAAGGTGCTTATGGGTGATGTGCCAGACCGTGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000134176.8 ENSMUST00000153251.8 ENSMUST00000164589.9 |
||
| CDS GCA 72 bp | GCTTTGGGACAGAGACTCCAGGGCTTCCCATCGGGATaGATCCAGCTGCGAGTTAAGGAGGGGCTTCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: ALGQRLQGFPSG*IQLRVKEGLHG Trigger: TCCATGAAGCCCCTCCTTAACTCGCAGCTGGATGCATCCCGATGGGAAGCCCTGGAGTCTCTGTCCCAAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164589.9 |
||
| CDS CCA 72 bp | AGAGACATCAGATTCTGGAGTCAGAAGCCCTCGGATTaGGGACAGCACCGCCTTCATGACCTCTCCGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RDIRFWSQKPSD*GQHRLHDLSVG Trigger: GCCCACGGAGAGGTCATGAAGGCGGTGCTGTCCCCAATCCGAGGGCTTCTGACTCCAGAATCTGATGTCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000134176.8 ENSMUST00000153251.8 ENSMUST00000164589.9 |
||
| CDS GCA 72 bp | CAGGCGGGAAAGGTCAGCTCGGGCAGCCAGAACATGTaGGATAGAGACATCAGATTCTGGAGTCAGAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QAGKVSSGSQNM*DRDIRFWSQKP Trigger: GGGCTTCTGACTCCAGAATCTGATGTCTCTATCGCACATGTTCTGGCTGCCCGAGCTGACCTTTCCCGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000134176.8 ENSMUST00000153251.8 ENSMUST00000164589.9 |
||
| CDS CCA 72 bp | GGCAGCCAGAACATGTGCGATAGAGACATCAGATTCTaGAGTCAGAAGCCCTCGGATTGGGGACAGCACCGC | + |
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Preference number: 6 (lower is better) Translates to: GSQNMCDRDIRF*SQKPSDWGQHR Trigger: GCGGTGCTGTCCCCAATCCGAGGGCTTCTGACTCCAGAATCTGATGTCTCTATCGCACATGTTCTGGCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000134176.8 ENSMUST00000153251.8 ENSMUST00000164589.9 |
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| CDS CCA 72 bp | ACATCACCCATAAGCACCTCTGCCCGGTCACCCCAGTaGAAAGCAGATGTTGTGAGGTCAAGGCGCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: TSPISTSARSPQ*KADVVRSRRFR Trigger: CCTGAAGCGCCTTGACCTCACAACATCTGCTTTCCACTGGGGTGACCGGGCAGAGGTGCTTATGGGTGATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144795.8 |
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| CDS TCA 72 bp | AGGCTTTGGGACAGAGACTCCAGGGCTTCCTTGTCATaGAACTCCCGAAGTAGCTGGCTAGCCAGGGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: RLWDRDSRASLS*NSRSSWLARVP Trigger: TGGAACCCTGGCTAGCCAGCTACTTCGGGAGTTTCATGACAAGGAAGCCCTGGAGTCTCTGTCCCAAAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144795.8 |
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