Pregenerated sensors for FAM98A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002017Ensembl transcript IDs: ENSMUST00000112507.4, ENSMUST00000234785.2
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCCCTCGACCACCTCTTCCCCCACGACCACTGCCTCGTTCACCATaGTGCCCACCATCTTGGTATCTATTGTCTTGCTGGTATCCACCG | + |
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Preference number: 1 (lower is better) Translates to: PPRPPLPPRPLPRSP*CPPSWYLLSCWYPP Trigger: CGGTGGATACCAGCAAGACAATAGATACCAAGATGGTGGGCACCATGGTGAACGAGGCAGTGGTCGTGGGGGAAGAGGTGGTCGAGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
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| 3UTR TCA 90 bp | ATTGTCTTGCTGGTATCCACCGCCCTGGTAGCCACTTCCTGTATATaGAGATGTCTGGAAACCACCATAGCCACCAGCTTGGTAGCCACC | + |
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Preference number: 1 (lower is better) Translates to: IVLLVSTALVATSCI*RCLETTIATSLVAT Trigger: GGTGGCTACCAAGCTGGTGGCTATGGTGGTTTCCAGACATCTTCATATACAGGAAGTGGCTACCAGGGCGGTGGATACCAGCAAGACAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
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| 3UTR GCA 90 bp | GGTACAGTATTCCACCAACAGGATAAGGCTACTGAATGTGCTATCTaGAAAAGAGCTCATGTAATAGGAACCAACCCAACAGGTCTACCA | + |
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Preference number: 1 (lower is better) Translates to: GTVFHQQDKATECAI*KRAHVIGTNPTGLP Trigger: TGGTAGACCTGTTGGGTTGGTTCCTATTACATGAGCTCTTTTGCAGATAGCACATTCAGTAGCCTTATCCTGTTGGTGGAATACTGTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| 3UTR TCA 90 bp | AGGATTCTGAAACTAAGTTTCTATTACTTGAGCTCTAGCAAAATGTaGGTTTCTGTAGCCTCAACTAGTATAATGTCTTCCTTGTCCAAA | + |
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Preference number: 1 (lower is better) Translates to: RILKLSFYYLSSSKM*VSVASTSIMSSLSK Trigger: TTTGGACAAGGAAGACATTATACTAGTTGAGGCTACAGAAACTCACATTTTGCTAGAGCTCAAGTAATAGAAACTTAGTTTCAGAATCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
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| 3UTR CAA 90 bp | TCTTCCCCCACGACCACTGCCTCGTTCACCATGGTGCCCACCATCTaGGTATCTATTGTCTTGCTGGTATCCACCGCCCTGGTAGCCACT | + |
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Preference number: 2 (lower is better) Translates to: SSPTTTASFTMVPTI*VSIVLLVSTALVAT Trigger: AGTGGCTACCAGGGCGGTGGATACCAGCAAGACAATAGATACCAAGATGGTGGGCACCATGGTGAACGAGGCAGTGGTCGTGGGGGAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCTCGTCCTCCGTATGAGGAATGTTCATAACCACCTCTCCCTCCGCCTCGGCCCATCTTGTCTTTTCTaGCACGGTGGCATCTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LLVLRMRNVHNHLSLRLGPSCLF*HGGISG Trigger: CCCAGAGATGCCACCGTGGCAGAAAAGACAAGATGG...GCCGAGGCGGAGGGAGAGGTGGTTATGAACATTCCTCATACGGAGGACGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
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| 3UTR-3UTR GCA 90 bp | CACTTCCTGTATATGAAGATGTCTGGAAACCACCATAGCCACCAGCTTGGTAGCCGGCCTCCTGCTTGCTaGTGGGGGCCATCTTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: HFLYMKMSGNHHSHQLGSRPPAC*WGPSCL Trigger: AAGACAAGATGGCCCCCAGCAGCAAGCAGGAGGCCG...GCTACCAAGCTGGTGGCTATGGTGGTTTCCAGACATCTTCATATACAGGAAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGGAGTATGCCTGCTACCTGTGGTCTTACATTCATTCCAAATAGATGTTGGATCTTTTCTGCCACGGTaGCATCTCTGGGGGTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: AGVCLLPVVLHSFQIDVGSFLPR*HLWGWR Trigger: CCTCCACCCCCAGAGATGCCACCGTGGCAGAAAAGA...TCCAACATCTATTTGGAATGAATGTAAGACCACAGGTAGCAGGCATACTCCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
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| 3UTR-3UTR TCA 90 bp | GAATTTCAAGTAAAAACAAGGGTGAAGGAGGAACGTTTGTCTCGGATGGATGCACTCCCTCCTTGTTCATaGCCTCCTCGTCCTCCGTAT | + |
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Preference number: 2 (lower is better) Translates to: EFQVKTRVKEERLSRMDALPPCS*PPRPPY Trigger: ATACGGAGGACGAGGAGGTCATGAACAAGGAGGGAG...TGCATCCATCCGAGACAAACGTTCCTCCTTCACCCTTGTTTTTACTTGAAATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGCAGAGCTATGCTCGGAGAATAGACATCAGAAGGTAGCTTACGAAAAACATCCTCCATGTTGGAAGTaGTGTTCAAACTGGCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: RAELCSENRHQKVAYEKHPPCWK*CSNWPP Trigger: AGGGGGCCAGTTTGAACAGCACTTCCAACATGGAGG...ATGTTTTTCGTAAGCTACCTTCTGATGTCTATTCTCCGAGCATAGCTCTGCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
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| 3UTR CAA 90 bp | TCACAGCTTGACAGTGTTTACATGTACAAAAACCCGGCAGAAGCATaGAGTGATTTCAGGATAGACGTGGAGAGTGACTCAGCCAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: SQLDSVYMYKNPAEA*SDFRIDVESDSARL Trigger: AAGCCTGGCTGAGTCACTCTCCACGTCTATCCTGAAATCACTCAATGCTTCTGCCGGGTTTTTGTACATGTAAACACTGTCAAGCTGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGCATATGGTACAGTATTCCACCAACAGGATAAGGCTACTGAATGTGCTATCTCCTCGTCCTCCGTATaGGGAATGTTCATAACCACC | + |
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Preference number: 2 (lower is better) Translates to: GAYGTVFHQQDKATECAISSSSV*GMFITT Trigger: GGTGGTTATGAACATTCCTCATACGGAGGACGAGGA...GATAGCACATTCAGTAGCCTTATCCTGTTGGTGGAATACTGTACCATATGCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGCATATGGTACAGTATTCCACCAACAGGATAAGGCTACTGAATGTGCTATCCCTCGTTCACCATGGTaGCCACCATCTTGGTATCTA | + |
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Preference number: 2 (lower is better) Translates to: GAYGTVFHQQDKATECAIPRSPW*PPSWYL Trigger: TAGATACCAAGATGGTGGGCACCATGGTGAACGAGG...GATAGCACATTCAGTAGCCTTATCCTGTTGGTGGAATACTGTACCATATGCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
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| 3UTR CAA 90 bp | TCTTCCTTGTCCAAATCCAGAATGACTATACTGATAGCCTCCATGTaGGAAGTGCTGTTCAAACTGGCCCCCTTGATGATAAGTCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: SSLSKSRMTILIASM*EVLFKLAPLMISLA Trigger: AGCCAGACTTATCATCAAGGGGGCCAGTTTGAACAGCACTTCCAACATGGAGGCTATCAGTATAGTCATTCTGGATTTGGACAAGGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
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| 3UTR-3UTR TCA 90 bp | GCTCATGTAATAGGAACCAACCCAACAGGTCTACCAAAAAGAAAGGTGACAAACGCCACTTCCTGTATATaGAGATGTCTGGAAACCACC | + |
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Preference number: 2 (lower is better) Translates to: AHVIGTNPTGLPKRKVTNATSCI*RCLETT Trigger: GGTGGTTTCCAGACATCTTCATATACAGGAAGTGGC...GTTTGTCACCTTTCTTTTTGGTAGACCTGTTGGGTTGGTTCCTATTACATGAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGCATATGGTACAGTATTCCACCAACAGGATAAGGCTACTGAATGTGCTATCAAGCAGGAGTATGCCTaGTACCTGTGGTCTTACATT | + |
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Preference number: 2 (lower is better) Translates to: GAYGTVFHQQDKATECAIKQEYA*YLWSYI Trigger: AATGTAAGACCACAGGTAGCAGGCATACTCCTGCTT...GATAGCACATTCAGTAGCCTTATCCTGTTGGTGGAATACTGTACCATATGCTCC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| 3UTR-3UTR GCA 90 bp | GCATATGGTACAGTATTCCACCAACAGGATAAGGCTACTGAATGTGCTATCTGCAAGCAGGAGTATGCCTaGTACCTGTGGTCTTACATT | + |
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Preference number: 2 (lower is better) Translates to: AYGTVFHQQDKATECAICKQEYA*YLWSYI Trigger: AATGTAAGACCACAGGTAGCAGGCATACTCCTGCTT...GCAGATAGCACATTCAGTAGCCTTATCCTGTTGGTGGAATACTGTACCATATGC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| 3UTR-3UTR GCA 90 bp | TCACAGCTTGACAGTGTTTACATGTACAAAAACCCGGCAGAAGCATTGAGTGATTTTGTCTCGGATGGATaGAGGTCTGGTTTGAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: SQLDSVYMYKNPAEALSDFVSDG*RSGLSC Trigger: GCAACTCAAACCAGACCTGCATCCATCCGAGACAAA...ATCACTCAATGCTTCTGCCGGGTTTTTGTACATGTAAACACTGTCAAGCTGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGCAGAGCTATGCTCGGAGAATAGACATCAGAAGGTAGCTTACGAAAAACATTTTTGGCCGTGTTCATaGGTTTTGGAGGAGCATATG | + |
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Preference number: 2 (lower is better) Translates to: RAELCSENRHQKVAYEKHFWPCS*VLEEHM Trigger: CATATGCTCCTCCAAAACCCATGAACACGGCCAAAA...ATGTTTTTCGTAAGCTACCTTCTGATGTCTATTCTCCGAGCATAGCTCTGCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| 3UTR-3UTR CCA 90 bp | CACACCAAACACACCTCCAGCCACTTTCTTTCACAGCTTGACAGTGTTTACATGGGATGGATGCAGGTCTaGTTTGAGTTGCTATACTTA | + |
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Preference number: 2 (lower is better) Translates to: HTKHTSSHFLSQLDSVYMGWMQV*FELLYL Trigger: TAAGTATAGCAACTCAAACCAGACCTGCATCCATCC...CATGTAAACACTGTCAAGCTGTGAAAGAAAGTGGCTGGAGGTGTGTTTGGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCTGCTCGCCATTTCTTCTAGCGAATTTCAAGTAAAAACAAGGGTGAAGGAGAACGTTTGTCTCGGATaGATGCAGGTCTGGTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: CLLAISSSEFQVKTRVKENVCLG*MQVWFE Trigger: CTCAAACCAGACCTGCATCCATCCGAGACAAACGTT...CTCCTTCACCCTTGTTTTTACTTGAAATTCGCTAGAAGAAATGGCGAGCAGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| 3UTR-3UTR GCA 90 bp | CAAAAGAGCTCATGTAATAGGAACCAACCCAACAGGTCTACCAAAAAGAAAGGTCAGGCTTCTGTCTTCTaGAGCAATAATGAAGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: QKSSCNRNQPNRSTKKKGQASVF*SNNEGP Trigger: AGGCCCTTCATTATTGCTGCAGAAGACAGAAGCCTG...ACCTTTCTTTTTGGTAGACCTGTTGGGTTGGTTCCTATTACATGAGCTCTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| 3UTR-3UTR TCA 90 bp | CATATGGTACAGTATTCCACCAACAGGATAAGGCTACTGAATGTGCTATCTGCACATGGGTTGTTAATATaGGGAAGGTTTCCCAGCATT | + |
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Preference number: 2 (lower is better) Translates to: HMVQYSTNRIRLLNVLSAHGLLI*GRFPSI Trigger: AATGCTGGGAAACCTTCCTCATATTAACAACCCATG...TGCAGATAGCACATTCAGTAGCCTTATCCTGTTGGTGGAATACTGTACCATATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| 3UTR-3UTR TCA 90 bp | TCACAGCTTGACAGTGTTTACATGTACAAAAACCCGGCAGAAGCATTGAGTGATCATGGGTTGTTAATATaGGGAAGGTTTCCCAGCATT | + |
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Preference number: 2 (lower is better) Translates to: SQLDSVYMYKNPAEALSDHGLLI*GRFPSI Trigger: AATGCTGGGAAACCTTCCTCATATTAACAACCCATG...ATCACTCAATGCTTCTGCCGGGTTTTTGTACATGTAAACACTGTCAAGCTGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| 3UTR-3UTR GCA 90 bp | CACACCTCCAGCCACTTTCTTTCACAGCTTGACAGTGTTTACATGTACAAAAACGCCCATCAGCACCTATaGGATAAGAAAGATAACGTA | + |
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Preference number: 2 (lower is better) Translates to: HTSSHFLSQLDSVYMYKNAHQHL*DKKDNV Trigger: TACGTTATCTTTCTTATCGCATAGGTGCTGATGGGC...GTTTTTGTACATGTAAACACTGTCAAGCTGTGAAAGAAAGTGGCTGGAGGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAACACACCTCCAGCCACTTTCTTTCACAGCTTGACAGTGTTTACATGTACAAGATACTACGGTTCTTaGCTTAGTTTGCTTTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: PNTPPATFFHSLTVFTCTRYYGS*LSLLLL Trigger: CAACAAAAGCAAACTAAGTCAAGAACCGTAGTATCT...TGTACATGTAAACACTGTCAAGCTGTGAAAGAAAGTGGCTGGAGGTGTGTTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAAGAGCTCATGTAATAGGAACCAACCCAACAGGTCTACCAAAAAGAAAGGTAGCTCTAGCAAAATGTaGGTTTCTGTAGCCTCAACT | + |
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Preference number: 2 (lower is better) Translates to: QKSSCNRNQPNRSTKKKGSSSKM*VSVAST Trigger: AGTTGAGGCTACAGAAACTCACATTTTGCTAGAGCT...ACCTTTCTTTTTGGTAGACCTGTTGGGTTGGTTCCTATTACATGAGCTCTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
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| 3UTR-3UTR CCA 90 bp | AACACACCTCCAGCCACTTTCTTTCACAGCTTGACAGTGTTTACATGTACAAAAGGATGGATGCAGGTCTaGTTTGAGTTGCTATACTTA | + |
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Preference number: 2 (lower is better) Translates to: NTPPATFFHSLTVFTCTKGWMQV*FELLYL Trigger: TAAGTATAGCAACTCAAACCAGACCTGCATCCATCC...TTTTGTACATGTAAACACTGTCAAGCTGTGAAAGAAAGTGGCTGGAGGTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCTGCTCGCCATTTCTTCTAGCGAATTTCAAGTAAAAACAAGGGTGAAGGAGAGATACTACGGTTCTTaGCTTAGTTTGCTTTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: CLLAISSSEFQVKTRVKERYYGS*LSLLLL Trigger: CAACAAAAGCAAACTAAGTCAAGAACCGTAGTATCT...CTCCTTCACCCTTGTTTTTACTTGAAATTCGCTAGAAGAAATGGCGAGCAGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| 3UTR-3UTR CCA 90 bp | AACACACCTCCAGCCACTTTCTTTCACAGCTTGACAGTGTTTACATGTACAAAATTTTGGAGGAGCATATaGTACAGTATTCCACCAACA | + |
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Preference number: 2 (lower is better) Translates to: NTPPATFFHSLTVFTCTKFWRSI*YSIPPT Trigger: TGTTGGTGGAATACTGTACCATATGCTCCTCCAAAA...TTTTGTACATGTAAACACTGTCAAGCTGTGAAAGAAAGTGGCTGGAGGTGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| 3UTR GCA 72 bp | CCCGACCCCCTCGACCACCTCTTCCCCCACGACCACTaGCTCGTTCACCATGGTGCCCACCATCTTGGTATC | + |
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Preference number: 3 (lower is better) Translates to: PDPLDHLFPHDH*LVHHGAHHLGI Trigger: GATACCAAGATGGTGGGCACCATGGTGAACGAGGCAGTGGTCGTGGGGGAAGAGGTGGTCGAGGGGGTCGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
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| 3UTR CCA 72 bp | CGACCACTGCCTCGTTCACCATGGTGCCCACCATCTTaGTATCTATTGTCTTGCTGGTATCCACCGCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: RPLPRSPWCPPS*YLLSCWYPPPW Trigger: CCAGGGCGGTGGATACCAGCAAGACAATAGATACCAAGATGGTGGGCACCATGGTGAACGAGGCAGTGGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
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| 3UTR TCA 72 bp | TCTCCCTCCTTGTTCATGACCTCCTCGTCCTCCGTATaGGGAATGTTCATAACCACCTCTCCCTCCGCCTCG | + |
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Preference number: 3 (lower is better) Translates to: SPSLFMTSSSSV*GMFITTSPSAS Trigger: CGAGGCGGAGGGAGAGGTGGTTATGAACATTCCTCATACGGAGGACGAGGAGGTCATGAACAAGGAGGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
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| 3UTR-3UTR CAA 90 bp | CCTCCTGCACGGAGCAGGACTCCATCTCACTTCGTAGTGCACGTCCATCACAAGATGGTGCCCACCATCTaGGTATCTATTGTCTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: PPARSRTPSHFVVHVHHKMVPTI*VSIVLL Trigger: CAGCAAGACAATAGATACCAAGATGGTGGGCACCAT...CTTGTGATGGACGTGCACTACGAAGTGAGATGGAGTCCTGCTCCGTGCAGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
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| 3UTR TCA 72 bp | CTGGTATCCACCGCCCTGGTAGCCACTTCCTGTATATaGAGATGTCTGGAAACCACCATAGCCACCAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: LVSTALVATSCI*RCLETTIATSL Trigger: CAAGCTGGTGGCTATGGTGGTTTCCAGACATCTTCATATACAGGAAGTGGCTACCAGGGCGGTGGATACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
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| 3UTR-3UTR CAA 90 bp | CACACCTCCAGCCACTTTCTTTCACAGCTTGACAGTGTTTACATGTACAAAAACACCATAGCCACCAGCTaGGTAGCCACCACTGTGGCC | + |
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Preference number: 3 (lower is better) Translates to: HTSSHFLSQLDSVYMYKNTIATS*VATTVA Trigger: GGCCACAGTGGTGGCTACCAAGCTGGTGGCTATGGT...GTTTTTGTACATGTAAACACTGTCAAGCTGTGAAAGAAAGTGGCTGGAGGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
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| 3UTR-3UTR CAA 90 bp | AACACACCTCCAGCCACTTTCTTTCACAGCTTGACAGTGTTTACATGTACAAAACTGCTGGGGGCCATCTaGTCTTTTCTGCCACGGTGG | + |
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Preference number: 3 (lower is better) Translates to: NTPPATFFHSLTVFTCTKLLGAI*SFLPRW Trigger: CCACCGTGGCAGAAAAGACAAGATGGCCCCCAGCAG...TTTTGTACATGTAAACACTGTCAAGCTGTGAAAGAAAGTGGCTGGAGGTGTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
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| 3UTR-3UTR CAA 90 bp | AAAAGAGCTCATGTAATAGGAACCAACCCAACAGGTCTACCAAAAAGAAAGGTGTCCACCTCTCCCTCCTaGTTCATGACCTCCTCGTCC | + |
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Preference number: 3 (lower is better) Translates to: KRAHVIGTNPTGLPKRKVSTSPS*FMTSSS Trigger: GGACGAGGAGGTCATGAACAAGGAGGGAGAGGTGGA...CACCTTTCTTTTTGGTAGACCTGTTGGGTTGGTTCCTATTACATGAGCTCTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
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| 3UTR TCA 72 bp | CACCAAACACACCTCCAGCCACTTTCTTTCACAGCTTaGCAGTGTTTACATGTACAAAAACCCGGCAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: HQTHLQPLSFTA*QCLHVQKPGRS Trigger: GCTTCTGCCGGGTTTTTGTACATGTAAACACTGTCAAGCTGTGAAAGAAAGTGGCTGGAGGTGTGTTTGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| 3UTR-3UTR CAA 90 bp | TGTCTGCTCGCCATTTCTTCTAGCGAATTTCAAGTAAAAACAAGGGTGAAGGAGCCGTGTTCATGGGTTTaGGAGGAGCATATGGTACAG | + |
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Preference number: 3 (lower is better) Translates to: CLLAISSSEFQVKTRVKEPCSWV*EEHMVQ Trigger: CTGTACCATATGCTCCTCCAAAACCCATGAACACGG...CTCCTTCACCCTTGTTTTTACTTGAAATTCGCTAGAAGAAATGGCGAGCAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| 3UTR-3UTR CAA 90 bp | CACACCTCCAGCCACTTTCTTTCACAGCTTGACAGTGTTTACATGTACAAAAACCCGTGTTCATGGGTTTaGGAGGAGCATATGGTACAG | + |
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Preference number: 3 (lower is better) Translates to: HTSSHFLSQLDSVYMYKNPCSWV*EEHMVQ Trigger: CTGTACCATATGCTCCTCCAAAACCCATGAACACGG...GTTTTTGTACATGTAAACACTGTCAAGCTGTGAAAGAAAGTGGCTGGAGGTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| 3UTR-3UTR CAA 90 bp | AACACACCTCCAGCCACTTTCTTTCACAGCTTGACAGTGTTTACATGTACAAAAGTGAAGGAGGAACGTTaGTCTCGGATGGATGCAGGT | + |
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Preference number: 3 (lower is better) Translates to: NTPPATFFHSLTVFTCTKVKEER*SRMDAG Trigger: ACCTGCATCCATCCGAGACAAACGTTCCTCCTTCAC...TTTTGTACATGTAAACACTGTCAAGCTGTGAAAGAAAGTGGCTGGAGGTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGGAGTATGCCTGCTACCTGTGGTCTTACATTCATTCCAAATAGATGTTGGACCATCTTGGTATCTATaGTCTTGCTGGTATCCACCG | + |
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Preference number: 3 (lower is better) Translates to: AGVCLLPVVLHSFQIDVGPSWYL*SCWYPP Trigger: CGGTGGATACCAGCAAGACAATAGATACCAAGATGG...TCCAACATCTATTTGGAATGAATGTAAGACCACAGGTAGCAGGCATACTCCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
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| 3UTR CCA 72 bp | CTTGTATATGCTGAGCCAGTAGCATTAACTAGTGCATaGAACAGATGTCTGCTCGCCATTTCTTCTAGCGAA | + |
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Preference number: 3 (lower is better) Translates to: LVYAEPVALTSA*NRCLLAISSSE Trigger: TTCGCTAGAAGAAATGGCGAGCAGACATCTGTTCCATGCACTAGTTAATGCTACTGGCTCAGCATATACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| 3UTR-3UTR CAA 90 bp | CATATGGTACAGTATTCCACCAACAGGATAAGGCTACTGAATGTGCTATCTGCATTGTTTTTATGGGTTTaGGCCGTGTTCATGGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: HMVQYSTNRIRLLNVLSALFLWV*AVFMGF Trigger: AAAACCCATGAACACGGCCAAAACCCATAAAAACAA...TGCAGATAGCACATTCAGTAGCCTTATCCTGTTGGTGGAATACTGTACCATATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| 3UTR-3UTR CAA 90 bp | TGTCTGCTCGCCATTTCTTCTAGCGAATTTCAAGTAAAAACAAGGGTGAAGGAGACTTTCTTTCACAGCTaGACAGTGTTTACATGTACA | + |
|
Preference number: 3 (lower is better) Translates to: CLLAISSSEFQVKTRVKETFFHS*TVFTCT Trigger: TGTACATGTAAACACTGTCAAGCTGTGAAAGAAAGT...CTCCTTCACCCTTGTTTTTACTTGAAATTCGCTAGAAGAAATGGCGAGCAGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| 3UTR-3UTR CAA 90 bp | AACACACCTCCAGCCACTTTCTTTCACAGCTTGACAGTGTTTACATGTACAAAAAGTATAATGTCTTCCTaGTCCAAATCCAGAATGACT | + |
|
Preference number: 3 (lower is better) Translates to: NTPPATFFHSLTVFTCTKSIMSS*SKSRMT Trigger: AGTCATTCTGGATTTGGACAAGGAAGACATTATACT...TTTTGTACATGTAAACACTGTCAAGCTGTGAAAGAAAGTGGCTGGAGGTGTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
||
| CDS-3UTR TCA 90 bp | CCTCCTGCACGGAGCAGGACTCCATCTCACTTCGTAGTGCACGTCCATCACAAGCTCCCTCCTTGTTCATaGCCTCCTCGTCCTCCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PPARSRTPSHFVVHVHHKLPPCS*PPRPPY Trigger: ATACGGAGGACGAGGAGGTCATGAACAAGGAGGGAG...CTTGTGATGGACGTGCACTACGAAGTGAGATGGAGTCCTGCTCCGTGCAGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112507.4 |
||
| CDS-3UTR CCA 90 bp | CCATGGTGCCCACCATCTTGGTATCTATTGTCTTGCTGGTATCCACCGCCCTGGCTTTTCCCAGTGGGCTaGTCCCATCGGCTTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PWCPPSWYLLSCWYPPPWLFPVG*SHRLLQ Trigger: CTGAAGAAGCCGATGGGACCAGCCCACTGGGAAAAG...CCAGGGCGGTGGATACCAGCAAGACAATAGATACCAAGATGGTGGGCACCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCTGCACGGAGCAGGACTCCATCTCACTTCGTAGTGCACGTCCATCACAAGTCTATCTTTTCCCAGTaGGCTGGTCCCATCGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PPARSRTPSHFVVHVHHKSIFSQ*AGPIGF Trigger: GAAGCCGATGGGACCAGCCCACTGGGAAAAGATAGA...CTTGTGATGGACGTGCACTACGAAGTGAGATGGAGTCCTGCTCCGTGCAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| 3UTR CAA 72 bp | ACGACCACTGCCTCGTTCACCATGGTGCCCACCATCTaGGTATCTATTGTCTTGCTGGTATCCACCGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TTTASFTMVPTI*VSIVLLVSTAL Trigger: CAGGGCGGTGGATACCAGCAAGACAATAGATACCAAGATGGTGGGCACCATGGTGAACGAGGCAGTGGTCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCTGCACGGAGCAGGACTCCATCTCACTTCGTAGTGCACGTCCATCACAAGCAACAAGAAGGCGCTTaGTTACATCCCCGGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PPARSRTPSHFVVHVHHKQQEGA*LHPRMS Trigger: TGACATCCGGGGATGTAACCAAGCGCCTTCTTGTTG...CTTGTGATGGACGTGCACTACGAAGTGAGATGGAGTCCTGCTCCGTGCAGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCATATGGTACAGTATTCCACCAACAGGATAAGGCTACTGAATGTGCTATCCCCCAGCCTCCTCCCTaGCTTCCACGTCCTCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GAYGTVFHQQDKATECAIPQPPP*LPRPPR Trigger: TCGGGGAGGACGTGGAAGCCAGGGAGGAGGCTGGGG...GATAGCACATTCAGTAGCCTTATCCTGTTGGTGGAATACTGTACCATATGCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112507.4 |
||
| 3UTR CAA 72 bp | TTCACCATGGTGCCCACCATCTTGGTATCTATTGTCTaGCTGGTATCCACCGCCCTGGTAGCCACTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FTMVPTILVSIV*LVSTALVATSC Trigger: ACAGGAAGTGGCTACCAGGGCGGTGGATACCAGCAAGACAATAGATACCAAGATGGTGGGCACCATGGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTCGTCCTCCGTATGAGGAATGTTCATAACCACCTCTCCCTCCGCCTCGGCCAGTCTTTTCTCTTATaGACCCACTGCTTGTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LLVLRMRNVHNHLSLRLGQSFLL*THCLSL Trigger: TAAGGACAAGCAGTGGGTCCATAAGAGAAAAGACTG...GCCGAGGCGGAGGGAGAGGTGGTTATGAACATTCCTCATACGGAGGACGAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
||
| CDS-3UTR GCA 90 bp | CCTCCTGCACGGAGCAGGACTCCATCTCACTTCGTAGTGCACGTCCATCACAAGCTCTTATGGACCCACTaGTTGTCCTTAAAATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PPARSRTPSHFVVHVHHKLLWTH*LSLKSL Trigger: CAAAGATTTTAAGGACAAGCAGTGGGTCCATAAGAG...CTTGTGATGGACGTGCACTACGAAGTGAGATGGAGTCCTGCTCCGTGCAGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS-3UTR GCA 90 bp | CTCGCCATTTCTTCTAGCGAATTTCAAGTAAAAACAAGGGTGAAGGAGGAACGTCGGCCTCCTGCTTGCTaGTGGGGGCCATCTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LAISSSEFQVKTRVKEERRPPAC*WGPSCL Trigger: AAGACAAGATGGCCCCCAGCAGCAAGCAGGAGGCCG...ACGTTCCTCCTTCACCCTTGTTTTTACTTGAAATTCGCTAGAAGAAATGGCGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112507.4 |
||
| CDS-3UTR TCA 90 bp | TGGCCGTGTTCATGGGTTTTGGAGGAGCATATGGTACAGTATTCCACCAACAGGATGCCTTTCAACTCTTaGAAGACCTCACTACCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WPCSWVLEEHMVQYSTNRMPFNS*KTSLPP Trigger: AGGCGGTAGTGAGGTCTTTCAAGAGTTGAAAGGCAT...CCTGTTGGTGGAATACTGTACCATATGCTCCTCCAAAACCCATGAACACGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCTGCACGGAGCAGGACTCCATCTCACTTCGTAGTGCACGTCCATCACAAGATCCCGCTGAAGAATTaGAACATAGTTATATTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPARSRTPSHFVVHVHHKIPLKN*NIVILA Trigger: AGCCAATATAACTATGTTCCAATTCTTCAGCGGGAT...CTTGTGATGGACGTGCACTACGAAGTGAGATGGAGTCCTGCTCCGTGCAGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS-3UTR CCA 90 bp | GCATATGGTACAGTATTCCACCAACAGGATAAGGCTACTGAATGTGCTATCTGCCTTTTCCCAGTGGGCTaGTCCCATCGGCTTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AYGTVFHQQDKATECAICLFPVG*SHRLLQ Trigger: CTGAAGAAGCCGATGGGACCAGCCCACTGGGAAAAG...GCAGATAGCACATTCAGTAGCCTTATCCTGTTGGTGGAATACTGTACCATATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCTGCACGGAGCAGGACTCCATCTCACTTCGTAGTGCACGTCCATCACAAGTCATTGGCTATGGCTTaGTTAATGGCTTCTATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PPARSRTPSHFVVHVHHKSLAMA*LMASIF Trigger: AAAGATAGAAGCCATTAACCAAGCCATAGCCAATGA...CTTGTGATGGACGTGCACTACGAAGTGAGATGGAGTCCTGCTCCGTGCAGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS-3UTR GCA 90 bp | CCAAACACACCTCCAGCCACTTTCTTTCACAGCTTGACAGTGTTTACATGTACACCATCTTGTCTTTTCTaGCACGGTGGCATCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PNTPPATFFHSLTVFTCTPSCLF*HGGISG Trigger: CCCAGAGATGCCACCGTGGCAGAAAAGACAAGATGG...TGTACATGTAAACACTGTCAAGCTGTGAAAGAAAGTGGCTGGAGGTGTGTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112507.4 |
||
| CDS-3UTR CCA 90 bp | TTTTGGCCGTGTTCATGGGTTTTGGAGGAGCATATGGTACAGTATTCCACCAACCCACTCACCTCAAGCTaGAACTCTTCAGCTTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FWPCSWVLEEHMVQYSTNPLTSS*NSSASL Trigger: AAGCGAAGCTGAAGAGTTCCAGCTTGAGGTGAGTGG...GTTGGTGGAATACTGTACCATATGCTCCTCCAAAACCCATGAACACGGCCAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS-3UTR CCA 90 bp | ATCCTAAGCAGGAGTATGCCTGCTACCTGTGGTCTTACATTCATTCCAAATAGAGACCAGCCAAAGGACTaGACGGTGACATCCAAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: ILSRSMPATCGLTFIPNRDQPKD*TVTSKR Trigger: ACGCTTGGATGTCACCGTCCAGTCCTTTGGCTGGTC...TCTATTTGGAATGAATGTAAGACCACAGGTAGCAGGCATACTCCTGCTTAGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS-3UTR CCA 90 bp | CTCGCCATTTCTTCTAGCGAATTTCAAGTAAAAACAAGGGTGAAGGAGGAACGTGACCAGCCAAAGGACTaGACGGTGACATCCAAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LAISSSEFQVKTRVKEERDQPKD*TVTSKR Trigger: ACGCTTGGATGTCACCGTCCAGTCCTTTGGCTGGTC...ACGTTCCTCCTTCACCCTTGTTTTTACTTGAAATTCGCTAGAAGAAATGGCGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS-3UTR TCA 90 bp | CACACCAAACACACCTCCAGCCACTTTCTTTCACAGCTTGACAGTGTTTACATGGCTAGTTTGTCTGTCTaGCTCTTAGCTCTGTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HTKHTSSHFLSQLDSVYMASLSV*LLALSD Trigger: GTCTGACAGAGCTAAGAGTCAGACAGACAAACTAGC...CATGTAAACACTGTCAAGCTGTGAAAGAAAGTGGCTGGAGGTGTGTTTGGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGAGTATGCCTGCTACCTGTGGTCTTACATTCATTCCAAATAGATGTTGGATGGTATCTATTGTCTTaGTGGTATCCACCGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGVCLLPVVLHSFQIDVGWYLLS*WYPPPW Trigger: CCAGGGCGGTGGATACCAGCAAGACAATAGATACCA...TCCAACATCTATTTGGAATGAATGTAAGACCACAGGTAGCAGGCATACTCCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112507.4 |
||
| CDS-3UTR CCA 90 bp | TCGTTCACCATGGTGCCCACCATCTTGGTATCTATTGTCTTGCTGGTATCCACCTATTGGCTGGAGGTTTaGACATTCCTAGAGCAATAC | + |
|
Preference number: 4 (lower is better) Translates to: SFTMVPTILVSIVLLVSTYWLEV*TFLEQY Trigger: GTATTGCTCTAGGAATGTCCAAACCTCCAGCCAATA...GGTGGATACCAGCAAGACAATAGATACCAAGATGGTGGGCACCATGGTGAACGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
||
| CDS-3UTR CCA 90 bp | GGATGGATGCAGGTCTGGTTTGAGTTGCTATACTTAACTAAGTGCCTACAGATATCTATCTTTTCCCAGTaGGCTGGTCCCATCGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GWMQVWFELLYLTKCLQISIFSQ*AGPIGF Trigger: GAAGCCGATGGGACCAGCCCACTGGGAAAAGATAGA...TATCTGTAGGCACTTAGTTAAGTATAGCAACTCAAACCAGACCTGCATCCATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS-3UTR CCA 90 bp | TGGCCGTGTTCATGGGTTTTGGAGGAGCATATGGTACAGTATTCCACCAACAGGCAGTCTTTTCTCTTATaGACCCACTGCTTGTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: WPCSWVLEEHMVQYSTNRQSFLL*THCLSL Trigger: TAAGGACAAGCAGTGGGTCCATAAGAGAAAAGACTG...CCTGTTGGTGGAATACTGTACCATATGCTCCTCCAAAACCCATGAACACGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS-3UTR CCA 90 bp | CTCGCCATTTCTTCTAGCGAATTTCAAGTAAAAACAAGGGTGAAGGAGGAACGTCTGCCTCGTTCACCATaGTGCCCACCATCTTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LAISSSEFQVKTRVKEERLPRSP*CPPSWY Trigger: ATACCAAGATGGTGGGCACCATGGTGAACGAGGCAG...ACGTTCCTCCTTCACCCTTGTTTTTACTTGAAATTCGCTAGAAGAAATGGCGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112507.4 |
||
| CDS-3UTR TCA 90 bp | AGCAGGAGTATGCCTGCTACCTGTGGTCTTACATTCATTCCAAATAGATGTTGGAACGGCTTTCCCACATaGTTAGGCGGAACTTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRSMPATCGLTFIPNRCWNGFPT*LGGTFA Trigger: AGCAAAAGTTCCGCCTAATCATGTGGGAAAGCCGTT...CCAACATCTATTTGGAATGAATGTAAGACCACAGGTAGCAGGCATACTCCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS-3UTR TCA 90 bp | CATATGGTACAGTATTCCACCAACAGGATAAGGCTACTGAATGTGCTATCTGCATCCTCGTCCTCCGTATaGGGAATGTTCATAACCACC | + |
|
Preference number: 4 (lower is better) Translates to: HMVQYSTNRIRLLNVLSASSSSV*GMFITT Trigger: GGTGGTTATGAACATTCCTCATACGGAGGACGAGGA...TGCAGATAGCACATTCAGTAGCCTTATCCTGTTGGTGGAATACTGTACCATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112507.4 |
||
| CDS-3UTR GCA 90 bp | TGTCTGCTCGCCATTTCTTCTAGCGAATTTCAAGTAAAAACAAGGGTGAAGGAGCCTCGTTCACCATGGTaGCCACCATCTTGGTATCTA | + |
|
Preference number: 4 (lower is better) Translates to: CLLAISSSEFQVKTRVKEPRSPW*PPSWYL Trigger: TAGATACCAAGATGGTGGGCACCATGGTGAACGAGG...CTCCTTCACCCTTGTTTTTACTTGAAATTCGCTAGAAGAAATGGCGAGCAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112507.4 |
||
| CDS-3UTR TCA 90 bp | CACACCTCCAGCCACTTTCTTTCACAGCTTGACAGTGTTTACATGTACAAAAACATGCCTTTCAACTCTTaGAAGACCTCACTACCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HTSSHFLSQLDSVYMYKNMPFNS*KTSLPP Trigger: AGGCGGTAGTGAGGTCTTTCAAGAGTTGAAAGGCAT...GTTTTTGTACATGTAAACACTGTCAAGCTGTGAAAGAAAGTGGCTGGAGGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS-3UTR TCA 90 bp | CACACCTCCAGCCACTTTCTTTCACAGCTTGACAGTGTTTACATGTACAAAAACAACGGCTTTCCCACATaGTTAGGCGGAACTTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HTSSHFLSQLDSVYMYKNNGFPT*LGGTFA Trigger: AGCAAAAGTTCCGCCTAATCATGTGGGAAAGCCGTT...GTTTTTGTACATGTAAACACTGTCAAGCTGTGAAAGAAAGTGGCTGGAGGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGAGCTCATGTAATAGGAACCAACCCAACAGGTCTACCAAAAAGAAAGGTGCAACAAGAAGGCGCTTaGTTACATCCCCGGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KRAHVIGTNPTGLPKRKVQQEGA*LHPRMS Trigger: TGACATCCGGGGATGTAACCAAGCGCCTTCTTGTTG...CACCTTTCTTTTTGGTAGACCTGTTGGGTTGGTTCCTATTACATGAGCTCTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS-3UTR CCA 90 bp | TTTTGGCCGTGTTCATGGGTTTTGGAGGAGCATATGGTACAGTATTCCACCAACTATTGGCTGGAGGTTTaGACATTCCTAGAGCAATAC | + |
|
Preference number: 4 (lower is better) Translates to: FWPCSWVLEEHMVQYSTNYWLEV*TFLEQY Trigger: GTATTGCTCTAGGAATGTCCAAACCTCCAGCCAATA...GTTGGTGGAATACTGTACCATATGCTCCTCCAAAACCCATGAACACGGCCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS-3UTR CCA 90 bp | TGGCCGTGTTCATGGGTTTTGGAGGAGCATATGGTACAGTATTCCACCAACAGGATCCCGCTGAAGAATTaGAACATAGTTATATTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WPCSWVLEEHMVQYSTNRIPLKN*NIVILA Trigger: AGCCAATATAACTATGTTCCAATTCTTCAGCGGGAT...CCTGTTGGTGGAATACTGTACCATATGCTCCTCCAAAACCCATGAACACGGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS-3UTR CCA 90 bp | GAGAATAGACATCAGAAGGTAGCTTACGAAAAACATACATGGGTTGTTAATATGTCTTTTCTGCCACGGTaGCATCTCTGGGGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ENRHQKVAYEKHTWVVNMSFLPR*HLWGWR Trigger: CCTCCACCCCCAGAGATGCCACCGTGGCAGAAAAGA...CATATTAACAACCCATGTATGTTTTTCGTAAGCTACCTTCTGATGTCTATTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000112507.4 |
||
| 3UTR CAA 72 bp | TGTTGTTTTTATGGGTTTTGGCCGTGTTCATGGGTTTaGGAGGAGCATATGGTACAGTATTCCACCAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: CCFYGFWPCSWV*EEHMVQYSTNR Trigger: CCTGTTGGTGGAATACTGTACCATATGCTCCTCCAAAACCCATGAACACGGCCAAAACCCATAAAAACAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| 3UTR CAA 72 bp | AACGTTTGTCTCGGATGGATGCAGGTCTGGTTTGAGTaGCTATACTTAACTAAGTGCCTACAGATACTACGG | + |
|
Preference number: 4 (lower is better) Translates to: NVCLGWMQVWFE*LYLTKCLQILR Trigger: CCGTAGTATCTGTAGGCACTTAGTTAAGTATAGCAACTCAAACCAGACCTGCATCCATCCGAGACAAACGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| 3UTR CAA 72 bp | GACAGTGTTTACATGTACAAAAACCCGGCAGAAGCATaGAGTGATTTCAGGATAGACGTGGAGAGTGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: DSVYMYKNPAEA*SDFRIDVESDS Trigger: TGAGTCACTCTCCACGTCTATCCTGAAATCACTCAATGCTTCTGCCGGGTTTTTGTACATGTAAACACTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| 3UTR CAA 72 bp | TCCAAATCCAGAATGACTATACTGATAGCCTCCATGTaGGAAGTGCTGTTCAAACTGGCCCCCTTGATGATA | + |
|
Preference number: 4 (lower is better) Translates to: SKSRMTILIASM*EVLFKLAPLMI Trigger: TATCATCAAGGGGGCCAGTTTGAACAGCACTTCCAACATGGAGGCTATCAGTATAGTCATTCTGGATTTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
||
| CDS-3UTR GCA 90 bp | CACTTCCTGTATATGAAGATGTCTGGAAACCACCATAGCCACCAGCTTGGTAGCGGACTGTTAGTTGCCTaGACATTTTCTTCTAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: HFLYMKMSGNHHSHQLGSGLLVA*TFSSSL Trigger: TAAACTAGAAGAAAATGTGCAGGCAACTAACAGTCC...GCTACCAAGCTGGTGGCTATGGTGGTTTCCAGACATCTTCATATACAGGAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAAGGTGACAAACATCTCTCTGAATAAAATGCCAATCAGGGCAGAGCTACCACTCACCTCAAGCTaGAACTCTTCAGCTTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KRKVTNISLNKMPIRAELPLTSS*NSSASL Trigger: AAGCGAAGCTGAAGAGTTCCAGCTTGAGGTGAGTGG...TAGCTCTGCCCTGATTGGCATTTTATTCAGAGAGATGTTTGTCACCTTTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS-3UTR CCA 90 bp | GGATGGATGCAGGTCTGGTTTGAGTTGCTATACTTAACTAAGTGCCTACAGATATCACACAGAGCATTCTaGCAGCTTCTAGTTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GWMQVWFELLYLTKCLQISHRAF*QLLVLR Trigger: TCTCAGAACTAGAAGCTGCCAGAATGCTCTGTGTGA...TATCTGTAGGCACTTAGTTAAGTATAGCAACTCAAACCAGACCTGCATCCATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS-3UTR CCA 90 bp | CAAAAGAGCTCATGTAATAGGAACCAACCCAACAGGTCTACCAAAAAGAAAGGTTGGTGCCCACCATCTTaGTATCTATTGTCTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QKSSCNRNQPNRSTKKKGWCPPS*YLLSCW Trigger: CCAGCAAGACAATAGATACCAAGATGGTGGGCACCA...ACCTTTCTTTTTGGTAGACCTGTTGGGTTGGTTCCTATTACATGAGCTCTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112507.4 |
||
| CDS-3UTR GCA 90 bp | CCAAACACACCTCCAGCCACTTTCTTTCACAGCTTGACAGTGTTTACATGTACAGGACTGTTAGTTGCCTaGACATTTTCTTCTAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: PNTPPATFFHSLTVFTCTGLLVA*TFSSSL Trigger: TAAACTAGAAGAAAATGTGCAGGCAACTAACAGTCC...TGTACATGTAAACACTGTCAAGCTGTGAAAGAAAGTGGCTGGAGGTGTGTTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS-3UTR TCA 90 bp | GAGAATAGACATCAGAAGGTAGCTTACGAAAAACATACATGGGTTGTTAATATGGCCACTTCCTGTATATaGAGATGTCTGGAAACCACC | + |
|
Preference number: 4 (lower is better) Translates to: ENRHQKVAYEKHTWVVNMATSCI*RCLETT Trigger: GGTGGTTTCCAGACATCTTCATATACAGGAAGTGGC...CATATTAACAACCCATGTATGTTTTTCGTAAGCTACCTTCTGATGTCTATTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112507.4 |
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| CDS-3UTR GCA 90 bp | AAAAGAGCTCATGTAATAGGAACCAACCCAACAGGTCTACCAAAAAGAAAGGTGCTCTTATGGACCCACTaGTTGTCCTTAAAATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KRAHVIGTNPTGLPKRKVLLWTH*LSLKSL Trigger: CAAAGATTTTAAGGACAAGCAGTGGGTCCATAAGAG...CACCTTTCTTTTTGGTAGACCTGTTGGGTTGGTTCCTATTACATGAGCTCTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS-3UTR CCA 90 bp | AAAAGAAAGGTGACAAACATCTCTCTGAATAAAATGCCAATCAGGGCAGAGCTATCATTGGCTATGGCTTaGTTAATGGCTTCTATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KRKVTNISLNKMPIRAELSLAMA*LMASIF Trigger: AAAGATAGAAGCCATTAACCAAGCCATAGCCAATGA...TAGCTCTGCCCTGATTGGCATTTTATTCAGAGAGATGTTTGTCACCTTTCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS CCA 90 bp | GGATACGGGCAGTTCATCTCCCCAAGTAGCCCACTCACCTCAAGCTaGAACTCTTCAGCTTCGCTTGGACTGTTAGTTGCCTGCACATTT | + |
|
Preference number: 5 (lower is better) Translates to: GYGQFISPSSPLTSS*NSSASLGLLVACTF Trigger: AAATGTGCAGGCAACTAACAGTCCAAGCGAAGCTGAAGAGTTCCAGCTTGAGGTGAGTGGGCTACTTGGGGAGATGAACTGCCCGTATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS-3UTR CAA 90 bp | TTTTGGCCGTGTTCATGGGTTTTGGAGGAGCATATGGTACAGTATTCCACCAACACCATAGCCACCAGCTaGGTAGCCACCACTGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FWPCSWVLEEHMVQYSTNTIATS*VATTVA Trigger: GGCCACAGTGGTGGCTACCAAGCTGGTGGCTATGGT...GTTGGTGGAATACTGTACCATATGCTCCTCCAAAACCCATGAACACGGCCAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112507.4 |
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| CDS-3UTR CAA 90 bp | CTCCTCGTCCTCCGTATGAGGAATGTTCATAACCACCTCTCCCTCCGCCTCGGCTTATGGACCCACTGCTaGTCCTTAAAATCTTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: LLVLRMRNVHNHLSLRLGLWTHC*SLKSLT Trigger: TGTCAAAGATTTTAAGGACAAGCAGTGGGTCCATAA...GCCGAGGCGGAGGGAGAGGTGGTTATGAACATTCCTCATACGGAGGACGAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234785.2 |
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| CDS-3UTR CAA 90 bp | CACACCAAACACACCTCCAGCCACTTTCTTTCACAGCTTGACAGTGTTTACATGTCCACCTCTCCCTCCTaGTTCATGACCTCCTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HTKHTSSHFLSQLDSVYMSTSPS*FMTSSS Trigger: GGACGAGGAGGTCATGAACAAGGAGGGAGAGGTGGA...CATGTAAACACTGTCAAGCTGTGAAAGAAAGTGGCTGGAGGTGTGTTTGGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112507.4 |
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| CDS-3UTR CAA 90 bp | GAGCATATGGTACAGTATTCCACCAACAGGATAAGGCTACTGAATGTGCTATCTCTGCTGGGGGCCATCTaGTCTTTTCTGCCACGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: EHMVQYSTNRIRLLNVLSLLGAI*SFLPRW Trigger: CCACCGTGGCAGAAAAGACAAGATGGCCCCCAGCAG...AGATAGCACATTCAGTAGCCTTATCCTGTTGGTGGAATACTGTACCATATGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112507.4 |
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| CDS TCA 90 bp | CTTGTCCTTAAAATCTTTGACAAGTCTTGTCTGGCGGCCAGAAGGTaGGCAACAGAGACCTTACCTTTAGGCGACAAGAGTGAGCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LVLKIFDKSCLAARR*ATETLPLGDKSERF Trigger: GAAGCGCTCACTCTTGTCGCCTAAAGGTAAGGTCTCTGTTGCTCACCTTCTGGCCGCCAGACAAGACTTGTCAAAGATTTTAAGGACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS CCA 90 bp | TTGATTAGCAGCTTCCTCCGGACTTCATATTCATTGGCTATGGCTTaGTTAATGGCTTCTATCTTTTCCCAGTGGGCTGGTCCCATCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LISSFLRTSYSLAMA*LMASIFSQWAGPIG Trigger: GCCGATGGGACCAGCCCACTGGGAAAAGATAGAAGCCATTAACCAAGCCATAGCCAATGAATATGAAGTCCGGAGGAAGCTGCTAATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS-3UTR CAA 90 bp | GCTCATGTAATAGGAACCAACCCAACAGGTCTACCAAAAAGAAAGGTGACAAACGTGACATCCAAGCGTTaGATTAGCAGCTTCCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: AHVIGTNPTGLPKRKVTNVTSKR*ISSFLR Trigger: CCGGAGGAAGCTGCTAATCAAACGCTTGGATGTCAC...GTTTGTCACCTTTCTTTTTGGTAGACCTGTTGGGTTGGTTCCTATTACATGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS-3UTR CAA 90 bp | ATCCTAAGCAGGAGTATGCCTGCTACCTGTGGTCTTACATTCATTCCAAATAGAGTGACATCCAAGCGTTaGATTAGCAGCTTCCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ILSRSMPATCGLTFIPNRVTSKR*ISSFLR Trigger: CCGGAGGAAGCTGCTAATCAAACGCTTGGATGTCAC...TCTATTTGGAATGAATGTAAGACCACAGGTAGCAGGCATACTCCTGCTTAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS-3UTR CAA 90 bp | AGCAGGAGTATGCCTGCTACCTGTGGTCTTACATTCATTCCAAATAGATGTTGGTTGGTATCTATTGTCTaGCTGGTATCCACCGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SRSMPATCGLTFIPNRCWLVSIV*LVSTAL Trigger: CAGGGCGGTGGATACCAGCAAGACAATAGATACCAA...CCAACATCTATTTGGAATGAATGTAAGACCACAGGTAGCAGGCATACTCCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112507.4 |
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| CDS-3UTR CAA 90 bp | AGGGCAGAGCTATGCTCGGAGAATAGACATCAGAAGGTAGCTTACGAAAAACATTATGCCTTTCAACTCTaGAAAGACCTCACTACCGCC | + |
|
Preference number: 5 (lower is better) Translates to: RAELCSENRHQKVAYEKHYAFQL*KDLTTA Trigger: GGCGGTAGTGAGGTCTTTCAAGAGTTGAAAGGCATA...ATGTTTTTCGTAAGCTACCTTCTGATGTCTATTCTCCGAGCATAGCTCTGCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS-3UTR CAA 90 bp | TGGCCGTGTTCATGGGTTTTGGAGGAGCATATGGTACAGTATTCCACCAACAGGAATCCCGCTGAAGAATaGGAACATAGTTATATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: WPCSWVLEEHMVQYSTNRNPAEE*EHSYIG Trigger: GCCAATATAACTATGTTCCAATTCTTCAGCGGGATT...CCTGTTGGTGGAATACTGTACCATATGCTCCTCCAAAACCCATGAACACGGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS-3UTR CAA 90 bp | TTTTGGCCGTGTTCATGGGTTTTGGAGGAGCATATGGTACAGTATTCCACCAACATATTGGCTGGAGGTTaGGACATTCCTAGAGCAATA | + |
|
Preference number: 5 (lower is better) Translates to: FWPCSWVLEEHMVQYSTNILAGG*DIPRAI Trigger: TATTGCTCTAGGAATGTCCAAACCTCCAGCCAATAT...GTTGGTGGAATACTGTACCATATGCTCCTCCAAAACCCATGAACACGGCCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS-3UTR CAA 90 bp | CACACCAAACACACCTCCAGCCACTTTCTTTCACAGCTTGACAGTGTTTACATGCGGACTTCATATTCATaGGCTATGGCTTGGTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: HTKHTSSHFLSQLDSVYMRTSYS*AMAWLM Trigger: CATTAACCAAGCCATAGCCAATGAATATGAAGTCCG...CATGTAAACACTGTCAAGCTGTGAAAGAAAGTGGCTGGAGGTGTGTTTGGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS-3UTR CAA 90 bp | CATATGGTACAGTATTCCACCAACAGGATAAGGCTACTGAATGTGCTATCTGCACCATCTTGGTATCTATaGTCTTGCTGGTATCCACCG | + |
|
Preference number: 5 (lower is better) Translates to: HMVQYSTNRIRLLNVLSAPSWYL*SCWYPP Trigger: CGGTGGATACCAGCAAGACAATAGATACCAAGATGG...TGCAGATAGCACATTCAGTAGCCTTATCCTGTTGGTGGAATACTGTACCATATG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112507.4 |
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| CDS-3UTR CAA 90 bp | TGTCTGCTCGCCATTTCTTCTAGCGAATTTCAAGTAAAAACAAGGGTGAAGGAGATGGTGCCCACCATCTaGGTATCTATTGTCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CLLAISSSEFQVKTRVKEMVPTI*VSIVLL Trigger: CAGCAAGACAATAGATACCAAGATGGTGGGCACCAT...CTCCTTCACCCTTGTTTTTACTTGAAATTCGCTAGAAGAAATGGCGAGCAGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112507.4 |
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| CDS-3UTR CAA 90 bp | GCTCATGTAATAGGAACCAACCCAACAGGTCTACCAAAAAGAAAGGTGACAAACATCTGTCCAGCCTCCTaGATGTTTATTTCCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AHVIGTNPTGLPKRKVTNICPAS*MFISSS Trigger: GGAAGAGGAAATAAACATCAAGGAGGCTGGACAGAT...GTTTGTCACCTTTCTTTTTGGTAGACCTGTTGGGTTGGTTCCTATTACATGAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112507.4 |
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| CDS-3UTR CAA 90 bp | AAAAGAAAGGTGACAAACATCTCTCTGAATAAAATGCCAATCAGGGCAGAGCTATATGCCTTTCAACTCTaGAAAGACCTCACTACCGCC | + |
|
Preference number: 5 (lower is better) Translates to: KRKVTNISLNKMPIRAELYAFQL*KDLTTA Trigger: GGCGGTAGTGAGGTCTTTCAAGAGTTGAAAGGCATA...TAGCTCTGCCCTGATTGGCATTTTATTCAGAGAGATGTTTGTCACCTTTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS-3UTR CAA 90 bp | GGATGGATGCAGGTCTGGTTTGAGTTGCTATACTTAACTAAGTGCCTACAGATAATATTGGCTGGAGGTTaGGACATTCCTAGAGCAATA | + |
|
Preference number: 5 (lower is better) Translates to: GWMQVWFELLYLTKCLQIILAGG*DIPRAI Trigger: TATTGCTCTAGGAATGTCCAAACCTCCAGCCAATAT...TATCTGTAGGCACTTAGTTAAGTATAGCAACTCAAACCAGACCTGCATCCATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS-3UTR CAA 90 bp | TCACAGCTTGACAGTGTTTACATGTACAAAAACCCGGCAGAAGCATTGAGTGATCGGACTTCATATTCATaGGCTATGGCTTGGTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: SQLDSVYMYKNPAEALSDRTSYS*AMAWLM Trigger: CATTAACCAAGCCATAGCCAATGAATATGAAGTCCG...ATCACTCAATGCTTCTGCCGGGTTTTTGTACATGTAAACACTGTCAAGCTGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS-3UTR CAA 90 bp | GAGCTATGCTCGGAGAATAGACATCAGAAGGTAGCTTACGAAAAACATACATGGTGGAACATAGTTATATaGGCTGGAGGTTTGGACATT | + |
|
Preference number: 5 (lower is better) Translates to: ELCSENRHQKVAYEKHTWWNIVI*AGGLDI Trigger: AATGTCCAAACCTCCAGCCAATATAACTATGTTCCA...CCATGTATGTTTTTCGTAAGCTACCTTCTGATGTCTATTCTCCGAGCATAGCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS-3UTR CAA 90 bp | GGATGGATGCAGGTCTGGTTTGAGTTGCTATACTTAACTAAGTGCCTACAGATATTCATTGGCTATGGCTaGGTTAATGGCTTCTATCTT | + |
|
Preference number: 5 (lower is better) Translates to: GWMQVWFELLYLTKCLQIFIGYG*VNGFYL Trigger: AAGATAGAAGCCATTAACCAAGCCATAGCCAATGAA...TATCTGTAGGCACTTAGTTAAGTATAGCAACTCAAACCAGACCTGCATCCATCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS-3UTR CAA 90 bp | TGTCTGCTCGCCATTTCTTCTAGCGAATTTCAAGTAAAAACAAGGGTGAAGGAGTTATGGACCCACTGCTaGTCCTTAAAATCTTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: CLLAISSSEFQVKTRVKELWTHC*SLKSLT Trigger: TGTCAAAGATTTTAAGGACAAGCAGTGGGTCCATAA...CTCCTTCACCCTTGTTTTTACTTGAAATTCGCTAGAAGAAATGGCGAGCAGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS-3UTR CAA 90 bp | AAAAGAGCTCATGTAATAGGAACCAACCCAACAGGTCTACCAAAAAGAAAGGTGAATCCCGCTGAAGAATaGGAACATAGTTATATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KRAHVIGTNPTGLPKRKVNPAEE*EHSYIG Trigger: GCCAATATAACTATGTTCCAATTCTTCAGCGGGATT...CACCTTTCTTTTTGGTAGACCTGTTGGGTTGGTTCCTATTACATGAGCTCTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS-3UTR CAA 90 bp | AAAAGAGCTCATGTAATAGGAACCAACCCAACAGGTCTACCAAAAAGAAAGGTGTTCATTGGCTATGGCTaGGTTAATGGCTTCTATCTT | + |
|
Preference number: 5 (lower is better) Translates to: KRAHVIGTNPTGLPKRKVFIGYG*VNGFYL Trigger: AAGATAGAAGCCATTAACCAAGCCATAGCCAATGAA...CACCTTTCTTTTTGGTAGACCTGTTGGGTTGGTTCCTATTACATGAGCTCTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS-3UTR CAA 90 bp | CTCGCCATTTCTTCTAGCGAATTTCAAGTAAAAACAAGGGTGAAGGAGGAACGTAGTATAATGTCTTCCTaGTCCAAATCCAGAATGACT | + |
|
Preference number: 5 (lower is better) Translates to: LAISSSEFQVKTRVKEERSIMSS*SKSRMT Trigger: AGTCATTCTGGATTTGGACAAGGAAGACATTATACT...ACGTTCCTCCTTCACCCTTGTTTTTACTTGAAATTCGCTAGAAGAAATGGCGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112507.4 |
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| CDS GCA 72 bp | GTAAACTCCGGGGAAGCGGCTCCAGCGGAGACTGCCTaGAACAGTGCACCATCGTCCAACAATGGGCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VNSGEAAPAETA*NSAPSSNNGPL Trigger: CAAGGGCCCATTGTTGGACGATGGTGCACTGTTGCAGGCAGTCTCCGCTGGAGCCGCTTCCCCGGAGTTTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS CAA 72 bp | AGGACTCTTAATTCAGACACCAGCCAAGCGCAGAGTTaGGTAAACTCCGGGGAAGCGGCTCCAGCGGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: RTLNSDTSQAQS*VNSGEAAPAET Trigger: AGTCTCCGCTGGAGCCGCTTCCCCGGAGTTTACCAAACTCTGCGCTTGGCTGGTGTCTGAATTAAGAGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS CAA 90 bp | AGTTTACAAAGGACTCTTAATTCAGACACCAGCCAAGCGCAGAGTTaGGTAAACTCCGGGGAAGCGGCTCCAGCGGAGACTGCCTGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: SLQRTLNSDTSQAQS*VNSGEAAPAETACN Trigger: GTTGCAGGCAGTCTCCGCTGGAGCCGCTTCCCCGGAGTTTACCAAACTCTGCGCTTGGCTGGTGTCTGAATTAAGAGTCCTTTGTAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS CCA 72 bp | CAGTTCATCTCCCCAAGTAGCCCACTCACCTCAAGCTaGAACTCTTCAGCTTCGCTTGGACTGTTAGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: QFISPSSPLTSS*NSSASLGLLVA Trigger: GGCAACTAACAGTCCAAGCGAAGCTGAAGAGTTCCAGCTTGAGGTGAGTGGGCTACTTGGGGAGATGAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS CCA 72 bp | GCAAAAGGAGGCAGTTCTTCTCAACAAGAAGGCGCTTaGTTACATCCCCGGATGTCAGAGAAGGATACGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AKGGSSSQQEGA*LHPRMSEKDTG Trigger: GCCCGTATCCTTCTCTGACATCCGGGGATGTAACCAAGCGCCTTCTTGTTGAGAAGAACTGCCTCCTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS CAA 72 bp | AGCAAAAGGAGGCAGTTCTTCTCAACAAGAAGGCGCTaGGTTACATCCCCGGATGTCAGAGAAGGATACGGG | + |
|
Preference number: 6 (lower is better) Translates to: SKRRQFFSTRRR*VTSPDVREGYG Trigger: CCCGTATCCTTCTCTGACATCCGGGGATGTAACCAAGCGCCTTCTTGTTGAGAAGAACTGCCTCCTTTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS CAA 90 bp | AGGTATGTGAGCAAAAGGAGGCAGTTCTTCTCAACAAGAAGGCGCTaGGTTACATCCCCGGATGTCAGAGAAGGATACGGGCAGTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: RYVSKRRQFFSTRRR*VTSPDVREGYGQFI Trigger: GATGAACTGCCCGTATCCTTCTCTGACATCCGGGGATGTAACCAAGCGCCTTCTTGTTGAGAAGAACTGCCTCCTTTTGCTCACATACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS CAA 72 bp | CAGCTTCCTCCGGACTTCATATTCATTGGCTATGGCTaGGTTAATGGCTTCTATCTTTTCCCAGTGGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QLPPDFIFIGYG*VNGFYLFPVGW Trigger: CCAGCCCACTGGGAAAAGATAGAAGCCATTAACCAAGCCATAGCCAATGAATATGAAGTCCGGAGGAAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS CAA 90 bp | AGGCAGTCTTTTCTCTTATGGACCCACTGCTTGTCCTTAAAATCTTaGACAAGTCTTGTCTGGCGGCCAGAAGGTGAGCAACAGAGACCT | + |
|
Preference number: 6 (lower is better) Translates to: RQSFLLWTHCLSLKS*TSLVWRPEGEQQRP Trigger: AGGTCTCTGTTGCTCACCTTCTGGCCGCCAGACAAGACTTGTCAAAGATTTTAAGGACAAGCAGTGGGTCCATAAGAGAAAAGACTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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| CDS TCA 72 bp | AAAATCTTTGACAAGTCTTGTCTGGCGGCCAGAAGGTaGGCAACAGAGACCTTACCTTTAGGCGACAAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: KIFDKSCLAARR*ATETLPLGDKS Trigger: ACTCTTGTCGCCTAAAGGTAAGGTCTCTGTTGCTCACCTTCTGGCCGCCAGACAAGACTTGTCAAAGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS CCA 72 bp | AGCTTCCTCCGGACTTCATATTCATTGGCTATGGCTTaGTTAATGGCTTCTATCTTTTCCCAGTGGGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SFLRTSYSLAMA*LMASIFSQWAG Trigger: ACCAGCCCACTGGGAAAAGATAGAAGCCATTAACCAAGCCATAGCCAATGAATATGAAGTCCGGAGGAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS CCA 72 bp | CACTGCTTGTCCTTAAAATCTTTGACAAGTCTTGTCTaGCGGCCAGAAGGTGAGCAACAGAGACCTTACCTT | + |
|
Preference number: 6 (lower is better) Translates to: HCLSLKSLTSLV*RPEGEQQRPYL Trigger: AAGGTAAGGTCTCTGTTGCTCACCTTCTGGCCGCCAGACAAGACTTGTCAAAGATTTTAAGGACAAGCAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS CAA 72 bp | TGGCACAGGCAGTCTTTTCTCTTATGGACCCACTGCTaGTCCTTAAAATCTTTGACAAGTCTTGTCTGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: WHRQSFLLWTHC*SLKSLTSLVWR Trigger: CCGCCAGACAAGACTTGTCAAAGATTTTAAGGACAAGCAGTGGGTCCATAAGAGAAAAGACTGCCTGTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS CAA 90 bp | ACATCCAAGCGTTTGATTAGCAGCTTCCTCCGGACTTCATATTCATaGGCTATGGCTTGGTTAATGGCTTCTATCTTTTCCCAGTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TSKRLISSFLRTSYS*AMAWLMASIFSQWA Trigger: AGCCCACTGGGAAAAGATAGAAGCCATTAACCAAGCCATAGCCAATGAATATGAAGTCCGGAGGAAGCTGCTAATCAAACGCTTGGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS CAA 72 bp | CGTTTGATTAGCAGCTTCCTCCGGACTTCATATTCATaGGCTATGGCTTGGTTAATGGCTTCTATCTTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RLISSFLRTSYS*AMAWLMASIFS Trigger: GGAAAAGATAGAAGCCATTAACCAAGCCATAGCCAATGAATATGAAGTCCGGAGGAAGCTGCTAATCAAACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
||
| CDS CAA 72 bp | TTCTCAATCCCGCTGAAGAATTGGAACATAGTTATATaGGCTGGAGGTTTGGACATTCCTAGAGCAATACAT | + |
|
Preference number: 6 (lower is better) Translates to: FSIPLKNWNIVI*AGGLDIPRAIH Trigger: ATGTATTGCTCTAGGAATGTCCAAACCTCCAGCCAATATAACTATGTTCCAATTCTTCAGCGGGATTGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112507.4 ENSMUST00000234785.2 |
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