Pregenerated sensors for FAM91A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037119Ensembl transcript IDs: ENSMUST00000037270.5
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACAAGAGAGGGCTAAGGCAGTGGTTCTCAGCCTTCCTGATGCTGTaGCCCTTCAACACAGTTCCTCATGGCACAGCGATCCCCAACCAC | + |
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Preference number: 1 (lower is better) Translates to: HKRGLRQWFSAFLML*PFNTVPHGTAIPNH Trigger: GTGGTTGGGGATCGCTGTGCCATGAGGAACTGTGTTGAAGGGTCACAGCATCAGGAAGGCTGAGAACCACTGCCTTAGCCCTCTCTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR TCA 90 bp | CCCTGGTCTGTACCCCTCACTGCTGGATGCTTGCCACTTCTAGCGTaGCTGCCTCAAGAACCAAGAAGCCTTTTGGAGGAAGAAGAGTCC | + |
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Preference number: 1 (lower is better) Translates to: PWSVPLTAGCLPLLA*LPQEPRSLLEEEES Trigger: GGACTCTTCTTCCTCCAAAAGGCTTCTTGGTTCTTGAGGCAGTCACGCTAGAAGTGGCAAGCATCCAGCAGTGAGGGGTACAGACCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR GCA 90 bp | CTGACGTCCACAGTAATCCTTAATGCCCTGGTCTGTACCCCTCACTaGTGGATGCTTGCCACTTCTAGCGTGACTGCCTCAAGAACCAAG | + |
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Preference number: 1 (lower is better) Translates to: LTSTVILNALVCTPH*WMLATSSVTASRTK Trigger: CTTGGTTCTTGAGGCAGTCACGCTAGAAGTGGCAAGCATCCAGCAGTGAGGGGTACAGACCAGGGCATTAAGGATTACTGTGGACGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR CCA 90 bp | ACGTCCACAGTAATCCTTAATGCCCTGGTCTGTACCCCTCACTGCTaGATGCTTGCCACTTCTAGCGTGACTGCCTCAAGAACCAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: TSTVILNALVCTPHC*MLATSSVTASRTKK Trigger: CTTCTTGGTTCTTGAGGCAGTCACGCTAGAAGTGGCAAGCATCCAGCAGTGAGGGGTACAGACCAGGGCATTAAGGATTACTGTGGACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR-3UTR GCA 90 bp | ATGCTTGCGTGTTTCAGGTCTGTCGCTTGCCCAATTCAGTTAGGGGAGCTCAACCACGAAGCCAGTCAGTaGCTCTTCACTCCCCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: MLACFRSVACPIQLGELNHEASQ*LFTPQS Trigger: GCTCTGGGGAGTGAAGAGGCACTGACTGGCTTCGTG...GTTGAGCTCCCCTAACTGAATTGGGCAAGCGACAGACCTGAAACACGCAAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR CAA 90 bp | GCCTCTTCACTCCCCAGAGCTGTGTGCCAGTTTCAGGTCCAGATGTaGTGTCTGAGGAATCGTTTCATCATGGAGCTGAGTCCAAGACAC | + |
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Preference number: 2 (lower is better) Translates to: ASSLPRAVCQFQVQM*CLRNRFIMELSPRH Trigger: GTGTCTTGGACTCAGCTCCATGATGAAACGATTCCTCAGACACAACATCTGGACCTGAAACTGGCACACAGCTCTGGGGAGTGAAGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGCAAACGACCCAGAAAGGGAAATCACATCCCTCAAACAAATGCAAAAGCACACCCCAGGGAAGGTaGCCTGGACAGCCTAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: RKQTTQKGKSHPSNKCKSTPQGR*PGQPKW Trigger: CCACTTAGGCTGTCCAGGTCACCTTCCCTGGGGTGT...GCTTTTGCATTTGTTTGAGGGATGTGATTTCCCTTTCTGGGTCGTTTGCTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR-3UTR TCA 90 bp | ATGCTTGCGTGTTTCAGGTCTGTCGCTTGCCCAATTCAGTTAGGGGAGCTCAACTCCAGATGTTGTGTCTaGGGAATCGTTTCATCATGG | + |
|
Preference number: 2 (lower is better) Translates to: MLACFRSVACPIQLGELNSRCCV*GIVSSW Trigger: CCATGATGAAACGATTCCTCAGACACAACATCTGGA...GTTGAGCTCCCCTAACTGAATTGGGCAAGCGACAGACCTGAAACACGCAAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGCAAACGACCCAGAAAGGGAAATCACATCCCTCAAACAAATGCAAAAGCTGCAGTGCTGGCTGCTaGGCAGTACTTGGTTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: RKQTTQKGKSHPSNKCKSCSAGC*AVLGCS Trigger: ACTGCAACCAAGTACTGCTCAGCAGCCAGCACTGCA...GCTTTTGCATTTGTTTGAGGGATGTGATTTCCCTTTCTGGGTCGTTTGCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGCAAACGACCCAGAAAGGGAAATCACATCCCTCAAACAAATGCAAAAGCTCTCCAGTGCAGTGCTaGCTGCTGAGCAGTACTTGG | + |
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Preference number: 2 (lower is better) Translates to: RKQTTQKGKSHPSNKCKSSPVQC*LLSSTW Trigger: CCAAGTACTGCTCAGCAGCCAGCACTGCACTGGAGA...GCTTTTGCATTTGTTTGAGGGATGTGATTTCCCTTTCTGGGTCGTTTGCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGCAAACGACCCAGAAAGGGAAATCACATCCCTCAAACAAATGCAAAAGCGCCTTCCTGATGCTGTaGCCCTTCAACACAGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: RKQTTQKGKSHPSNKCKSAFLML*PFNTVP Trigger: AGGAACTGTGTTGAAGGGTCACAGCATCAGGAAGGC...GCTTTTGCATTTGTTTGAGGGATGTGATTTCCCTTTCTGGGTCGTTTGCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR-3UTR GCA 90 bp | AGAAAGCAAACGACCCAGAAAGGGAAATCACATCCCTCAAACAAATGCAAAAGCTTGTCTCCAGTGCAGTaGTGGCTGCTGAGCAGTACT | + |
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Preference number: 2 (lower is better) Translates to: RKQTTQKGKSHPSNKCKSLSPVQ*WLLSST Trigger: AGTACTGCTCAGCAGCCAGCACTGCACTGGAGACAA...GCTTTTGCATTTGTTTGAGGGATGTGATTTCCCTTTCTGGGTCGTTTGCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGCAAACGACCCAGAAAGGGAAATCACATCCCTCAAACAAATGCAAAAGCTCATCCTCTCTAAAATaGACAGGGTTCCTCAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: RKQTTQKGKSHPSNKCKSSSSLK*TGFLRR Trigger: TCTTCTGAGGAACCCTGTTCATTTTAGAGAGGATGA...GCTTTTGCATTTGTTTGAGGGATGTGATTTCCCTTTCTGGGTCGTTTGCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR TCA 72 bp | GGATCTGAGCCCCCAAAGGGGTTGCAACCCACAGGGTaGGAACGGCTACTGAAAGGAATGGCTGAGCCTAAC | + |
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Preference number: 3 (lower is better) Translates to: GSEPPKGLQPTG*ERLLKGMAEPN Trigger: GTTAGGCTCAGCCATTCCTTTCAGTAGCCGTTCTCACCCTGTGGGTTGCAACCCCTTTGGGGGCTCAGATCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR GCA 72 bp | AAAGACCCAATGCCCACAGCACACGAAGCCAGTCAGTaGCTCTTCACTCCCCAGAGCTGTGTGCCAGTTTCA | + |
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Preference number: 3 (lower is better) Translates to: KDPMPTAHEASQ*LFTPQSCVPVS Trigger: TGAAACTGGCACACAGCTCTGGGGAGTGAAGAGGCACTGACTGGCTTCGTGTGCTGTGGGCATTGGGTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR GCA 72 bp | ACAGTAATCCTTAATGCCCTGGTCTGTACCCCTCACTaGTGGATGCTTGCCACTTCTAGCGTGACTGCCTCA | + |
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Preference number: 3 (lower is better) Translates to: TVILNALVCTPH*WMLATSSVTAS Trigger: TGAGGCAGTCACGCTAGAAGTGGCAAGCATCCAGCAGTGAGGGGTACAGACCAGGGCATTAAGGATTACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR CCA 72 bp | GTAATCCTTAATGCCCTGGTCTGTACCCCTCACTGCTaGATGCTTGCCACTTCTAGCGTGACTGCCTCAAGA | + |
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Preference number: 3 (lower is better) Translates to: VILNALVCTPHC*MLATSSVTASR Trigger: TCTTGAGGCAGTCACGCTAGAAGTGGCAAGCATCCAGCAGTGAGGGGTACAGACCAGGGCATTAAGGATTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR-3UTR CAA 90 bp | CCTGATGCTGTGACCCTTCAACACAGTTCCTCATGGCACAGCGATCCCCAACCATTTCAGGTCCAGATGTaGTGTCTGAGGAATCGTTTC | + |
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Preference number: 3 (lower is better) Translates to: PDAVTLQHSSSWHSDPQPFQVQM*CLRNRF Trigger: GAAACGATTCCTCAGACACAACATCTGGACCTGAAA...TGGTTGGGGATCGCTGTGCCATGAGGAACTGTGTTGAAGGGTCACAGCATCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR TCA 72 bp | AACACGAGCACATTCCGAGCAGTTGGTTCCTACCAGTaGAGCTTGACCTGCACCAAGGTAGCTGGAAGCTTA | + |
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Preference number: 3 (lower is better) Translates to: NTSTFRAVGSYQ*SLTCTKVAGSL Trigger: TAAGCTTCCAGCTACCTTGGTGCAGGTCAAGCTTCACTGGTAGGAACCAACTGCTCGGAATGTGCTCGTGTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR TCA 72 bp | GGAGCTCAACTAAGCACACAAACACCCCAGGGAAGGTaGCCTGGACAGCCTAAGTGGCAAATCCAAAGATTC | + |
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Preference number: 3 (lower is better) Translates to: GAQLSTQTPQGR*PGQPKWQIQRF Trigger: GAATCTTTGGATTTGCCACTTAGGCTGTCCAGGTCACCTTCCCTGGGGTGTTTGTGTGCTTAGTTGAGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR TCA 72 bp | GGATATCTGATATATGACCCTGTGAAAGGATGGATCTaGGCCCCCAAAGGGGTTGCAACCCACAGGGTGAGA | + |
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Preference number: 3 (lower is better) Translates to: GYLIYDPVKGWI*APKGVATHRVR Trigger: TCTCACCCTGTGGGTTGCAACCCCTTTGGGGGCTCAGATCCATCCTTTCACAGGGTCATATATCAGATATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR TCA 72 bp | AAAGCAAAGCACAAACACACGTCATCCTCTCTAAAATaGACAGGGTTCCTCAGAAGACAGGGACTTCGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: KAKHKHTSSSLK*TGFLRRQGLRL Trigger: CAGCCGAAGTCCCTGTCTTCTGAGGAACCCTGTTCATTTTAGAGAGGATGACGTGTGTTTGTGCTTTGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR TCA 72 bp | GACAGCCTAAGTGGCAAATCCAAAGATTCTGACATTTaGGACACTAAAAGACCCAATGCCCACAGCACACGA | + |
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Preference number: 3 (lower is better) Translates to: DSLSGKSKDSDI*DTKRPNAHSTR Trigger: TCGTGTGCTGTGGGCATTGGGTCTTTTAGTGTCTCAAATGTCAGAATCTTTGGATTTGCCACTTAGGCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR-3UTR CAA 90 bp | AGAAAGCAAACGACCCAGAAAGGGAAATCACATCCCTCAAACAAATGCAAAAGCGAACCAAGAAGCCTTTaGGAGGAAGAAGAGTCCATC | + |
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Preference number: 3 (lower is better) Translates to: RKQTTQKGKSHPSNKCKSEPRSL*EEEESI Trigger: GATGGACTCTTCTTCCTCCAAAAGGCTTCTTGGTTC...GCTTTTGCATTTGTTTGAGGGATGTGATTTCCCTTTCTGGGTCGTTTGCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR CCA 72 bp | AATGAACAGGGTTCCTCAGAAGACAGGGACTTCGGCTaGGATTCTGATGGTTTCAATCTTCCTACTAAACAA | + |
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Preference number: 3 (lower is better) Translates to: NEQGSSEDRDFG*DSDGFNLPTKQ Trigger: TTGTTTAGTAGGAAGATTGAAACCATCAGAATCCCAGCCGAAGTCCCTGTCTTCTGAGGAACCCTGTTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR CCA 72 bp | GGGAAATCACATCCCTCAAACAAATGCAAAAGCATCTaGTTACACATGTTACACAAGAGAGGGCTAAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: GKSHPSNKCKSI*LHMLHKRGLRQ Trigger: CTGCCTTAGCCCTCTCTTGTGTAACATGTGTAACCAGATGCTTTTGCATTTGTTTGAGGGATGTGATTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR TCA 72 bp | GCTTCTAAATGTCATGGTTCAAGTTATAATAAGTGGTaGGAGAGAGTGGTGCTAAGCCAGATGAAATTAAAC | + |
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Preference number: 3 (lower is better) Translates to: ASKCHGSSYNKW*ERVVLSQMKLN Trigger: GTTTAATTTCATCTGGCTTAGCACCACTCTCTCTCACCACTTATTATAACTTGAACCATGACATTTAGAAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS-3UTR TCA 90 bp | CCTGATGCTGTGACCCTTCAACACAGTTCCTCATGGCACAGCGATCCCCAACCAGATCCCAGCATAGTATaGGAATGGGGTTATCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: PDAVTLQHSSSWHSDPQPDPSIV*EWGYPQ Trigger: CTGAGGATAACCCCATTCTCATACTATGCTGGGATC...TGGTTGGGGATCGCTGTGCCATGAGGAACTGTGTTGAAGGGTCACAGCATCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS-3UTR TCA 90 bp | TTTGAGACACTAAAAGACCCAATGCCCACAGCACACGAAGCCAGTCAGTGCCTCAACCATGTCCCTGAATaGGCACTGCTGAGTGGGTTA | + |
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Preference number: 4 (lower is better) Translates to: FETLKDPMPTAHEASQCLNHVPE*ALLSGL Trigger: TAACCCACTCAGCAGTGCTCATTCAGGGACATGGTT...GAGGCACTGACTGGCTTCGTGTGCTGTGGGCATTGGGTCTTTTAGTGTCTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS-3UTR TCA 90 bp | TTTGAGACACTAAAAGACCCAATGCCCACAGCACACGAAGCCAGTCAGTGCCTCATCTGCAGTGCTTTATaGACACCCATACTGGCACGG | + |
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Preference number: 4 (lower is better) Translates to: FETLKDPMPTAHEASQCLICSAL*TPILAR Trigger: CCGTGCCAGTATGGGTGTTCATAAAGCACTGCAGAT...GAGGCACTGACTGGCTTCGTGTGCTGTGGGCATTGGGTCTTTTAGTGTCTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR CAA 72 bp | CTCCCCAGAGCTGTGTGCCAGTTTCAGGTCCAGATGTaGTGTCTGAGGAATCGTTTCATCATGGAGCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: LPRAVCQFQVQM*CLRNRFIMELS Trigger: ACTCAGCTCCATGATGAAACGATTCCTCAGACACAACATCTGGACCTGAAACTGGCACACAGCTCTGGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS-3UTR CCA 90 bp | TTACTGACGTCCACAGTAATCCTTAATGCCCTGGTCTGTACCCCTCACTGCTGGGCTTTGTGTACCCAGTaGACAGACTCAAACTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LLTSTVILNALVCTPHCWALCTQ*TDSNCS Trigger: TGAGCAGTTTGAGTCTGTCCACTGGGTACACAAAGC...CCAGCAGTGAGGGGTACAGACCAGGGCATTAAGGATTACTGTGGACGTCAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS-3UTR TCA 90 bp | TTTGAGACACTAAAAGACCCAATGCCCACAGCACACGAAGCCAGTCAGTGCCTCAGAGAGCTGAGGACCTaGGTCGATGATCTTATCAAT | + |
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Preference number: 4 (lower is better) Translates to: FETLKDPMPTAHEASQCLRELRT*VDDLIN Trigger: ATTGATAAGATCATCGACTCAGGTCCTCAGCTCTCT...GAGGCACTGACTGGCTTCGTGTGCTGTGGGCATTGGGTCTTTTAGTGTCTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS-3UTR TCA 90 bp | ATGCTTGCGTGTTTCAGGTCTGTCGCTTGCCCAATTCAGTTAGGGGAGCTCAACGTCCAGAGACTCATCTaGGAGTTTGCCTACTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: MLACFRSVACPIQLGELNVQRLI*EFAYFK Trigger: TTTGAAGTAGGCAAACTCTCAGATGAGTCTCTGGAC...GTTGAGCTCCCCTAACTGAATTGGGCAAGCGACAGACCTGAAACACGCAAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS-3UTR GCA 90 bp | ATGCTTGCGTGTTTCAGGTCTGTCGCTTGCCCAATTCAGTTAGGGGAGCTCAACGGAGTCAAACAGGAATaGAATTCGCTTTGTGTACCC | + |
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Preference number: 4 (lower is better) Translates to: MLACFRSVACPIQLGELNGVKQE*NSLCVP Trigger: GGGTACACAAAGCGAATTGCATTCCTGTTTGACTCC...GTTGAGCTCCCCTAACTGAATTGGGCAAGCGACAGACCTGAAACACGCAAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS-3UTR GCA 90 bp | TTTGAGACACTAAAAGACCCAATGCCCACAGCACACGAAGCCAGTCAGTGCCTCTTCAAACATGGTGACTaGGTGGCTTTTCAAGTTCGG | + |
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Preference number: 4 (lower is better) Translates to: FETLKDPMPTAHEASQCLFKHGD*VAFQVR Trigger: CCGAACTTGAAAAGCCACGCAGTCACCATGTTTGAA...GAGGCACTGACTGGCTTCGTGTGCTGTGGGCATTGGGTCTTTTAGTGTCTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS-3UTR GCA 90 bp | ATGCTTGCGTGTTTCAGGTCTGTCGCTTGCCCAATTCAGTTAGGGGAGCTCAACGTTCCTCAGAGTAAGTaGGTGGTCAAAGTATCTCTG | + |
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Preference number: 4 (lower is better) Translates to: MLACFRSVACPIQLGELNVPQSK*VVKVSL Trigger: CAGAGATACTTTGACCACGCACTTACTCTGAGGAAC...GTTGAGCTCCCCTAACTGAATTGGGCAAGCGACAGACCTGAAACACGCAAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS-3UTR CCA 90 bp | TTACTGACGTCCACAGTAATCCTTAATGCCCTGGTCTGTACCCCTCACTGCTGGAACATGGTGACTGCGTaGCTTTTCAAGTTCGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: LLTSTVILNALVCTPHCWNMVTA*LFKFGE Trigger: TTCACCGAACTTGAAAAGCCACGCAGTCACCATGTT...CCAGCAGTGAGGGGTACAGACCAGGGCATTAAGGATTACTGTGGACGTCAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS-3UTR CCA 90 bp | TTACTGACGTCCACAGTAATCCTTAATGCCCTGGTCTGTACCCCTCACTGCTGGATGAGCACTGCTGAGTaGGTTAAAGCATCATTCAGC | + |
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Preference number: 4 (lower is better) Translates to: LLTSTVILNALVCTPHCWMSTAE*VKASFS Trigger: GCTGAATGATGCTTTAACCCACTCAGCAGTGCTCAT...CCAGCAGTGAGGGGTACAGACCAGGGCATTAAGGATTACTGTGGACGTCAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS-3UTR CCA 90 bp | TTACTGACGTCCACAGTAATCCTTAATGCCCTGGTCTGTACCCCTCACTGCTGGAATGGAAAGGGTATATaGACAGTCTCTCCTACCCCA | + |
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Preference number: 4 (lower is better) Translates to: LLTSTVILNALVCTPHCWNGKGI*TVSPTP Trigger: TGGGGTAGGAGAGACTGTCCATATACCCTTTCCATT...CCAGCAGTGAGGGGTACAGACCAGGGCATTAAGGATTACTGTGGACGTCAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS-3UTR CCA 90 bp | CCTGATGCTGTGACCCTTCAACACAGTTCCTCATGGCACAGCGATCCCCAACCACTCTGCTTCATCAAATaGAAAGGGTATATGGACAGT | + |
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Preference number: 4 (lower is better) Translates to: PDAVTLQHSSSWHSDPQPLCFIK*KGYMDS Trigger: ACTGTCCATATACCCTTTCCATTTGATGAAGCAGAG...TGGTTGGGGATCGCTGTGCCATGAGGAACTGTGTTGAAGGGTCACAGCATCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS-3UTR TCA 90 bp | TTACTGACGTCCACAGTAATCCTTAATGCCCTGGTCTGTACCCCTCACTGCTGGCCTTCACCAGTGCTCTaGACCTTCTCTAATTCTATA | + |
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Preference number: 4 (lower is better) Translates to: LLTSTVILNALVCTPHCWPSPVL*TFSNSI Trigger: TATAGAATTAGAGAAGGTTCAGAGCACTGGTGAAGG...CCAGCAGTGAGGGGTACAGACCAGGGCATTAAGGATTACTGTGGACGTCAGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS-3UTR GCA 90 bp | TTTGAGACACTAAAAGACCCAATGCCCACAGCACACGAAGCCAGTCAGTGCCTCCTTCTCCTTCACCAGTaGTCTGAACCTTCTCTAATT | + |
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Preference number: 4 (lower is better) Translates to: FETLKDPMPTAHEASQCLLLLHQ*SEPSLI Trigger: AATTAGAGAAGGTTCAGAGCACTGGTGAAGGAGAAG...GAGGCACTGACTGGCTTCGTGTGCTGTGGGCATTGGGTCTTTTAGTGTCTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS-3UTR CCA 90 bp | AGAAAGCAAACGACCCAGAAAGGGAAATCACATCCCTCAAACAAATGCAAAAGCATAGTTGGGCTGGTCTaGCTGAGAGGTCTGAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: RKQTTQKGKSHPSNKCKSIVGLV*LRGLSH Trigger: GTGGCTCAGACCTCTCAGCCAGACCAGCCCAACTAT...GCTTTTGCATTTGTTTGAGGGATGTGATTTCCCTTTCTGGGTCGTTTGCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| 3UTR CAA 72 bp | AATCAGTGTAATGCTTGCGTGTTTCAGGTCTGTCGCTaGCCCAATTCAGTTAGGGGAGCTCAACTAAGCACA | + |
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Preference number: 4 (lower is better) Translates to: NQCNACVFQVCR*PNSVRGAQLST Trigger: TGTGCTTAGTTGAGCTCCCCTAACTGAATTGGGCAAGCGACAGACCTGAAACACGCAAGCATTACACTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS-3UTR TCA 90 bp | AGAAAGCAAACGACCCAGAAAGGGAAATCACATCCCTCAAACAAATGCAAAAGCGGTCACGACTGTACTTaGGCAGCTCCTCATAGTACT | + |
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Preference number: 4 (lower is better) Translates to: RKQTTQKGKSHPSNKCKSGHDCT*AAPHST Trigger: AGTACTATGAGGAGCTGCTCAAGTACAGTCGTGACC...GCTTTTGCATTTGTTTGAGGGATGTGATTTCCCTTTCTGGGTCGTTTGCTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS-3UTR TCA 90 bp | AGAAAGCAAACGACCCAGAAAGGGAAATCACATCCCTCAAACAAATGCAAAAGCCTACTTCAAACATGGTaGCTGCGTGGCTTTTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: RKQTTQKGKSHPSNKCKSLLQTW*LRGFSS Trigger: ACTTGAAAAGCCACGCAGTCACCATGTTTGAAGTAG...GCTTTTGCATTTGTTTGAGGGATGTGATTTCCCTTTCTGGGTCGTTTGCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS-3UTR CCA 90 bp | AGAAAGCAAACGACCCAGAAAGGGAAATCACATCCCTCAAACAAATGCAAAAGCACCCTGGAATATATCTaGCAGTTTCCGAAGTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: RKQTTQKGKSHPSNKCKSTLEYI*QFPKSC Trigger: ACAAGACTTCGGAAACTGCCAGATATATTCCAGGGT...GCTTTTGCATTTGTTTGAGGGATGTGATTTCCCTTTCTGGGTCGTTTGCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS-3UTR CAA 90 bp | CCTGATGCTGTGACCCTTCAACACAGTTCCTCATGGCACAGCGATCCCCAACCAACTGTGAAAGCACACTaGAGAAGCCAGGCTCCGCGT | + |
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Preference number: 5 (lower is better) Translates to: PDAVTLQHSSSWHSDPQPTVKAH*RSQAPR Trigger: ACGCGGAGCCTGGCTTCTCAAGTGTGCTTTCACAGT...TGGTTGGGGATCGCTGTGCCATGAGGAACTGTGTTGAAGGGTCACAGCATCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS-3UTR CAA 90 bp | TTACTGACGTCCACAGTAATCCTTAATGCCCTGGTCTGTACCCCTCACTGCTGGGACTCATCTGAGAGTTaGCCTACTTCAAACATGGTG | + |
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Preference number: 5 (lower is better) Translates to: LLTSTVILNALVCTPHCWDSSES*PTSNMV Trigger: CACCATGTTTGAAGTAGGCAAACTCTCAGATGAGTC...CCAGCAGTGAGGGGTACAGACCAGGGCATTAAGGATTACTGTGGACGTCAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS GCA 72 bp | CTATTTGTGTCTGTGTCAGTAGCAGAAGAGGCTTCTTaGACGGGACTCCTACTCTCCCCGCCATCCCACGAT | + |
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Preference number: 6 (lower is better) Translates to: LFVSVSVAEEAS*TGLLLSPPSHD Trigger: ATCGTGGGATGGCGGGGAGAGTAGGAGTCCCGTGCAAGAAGCCTCTTCTGCTACTGACACAGACACAAATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS TCA 72 bp | AATCTAGTGACCCAGAGAGCTGAGGACCTGAGTCGATaGTCTTATCAATGGCGCCTTTCTCAGGAAAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: NLVTQRAEDLSR*SYQWRLSQEKC Trigger: GCACTTTTCCTGAGAAAGGCGCCATTGATAAGATCATCGACTCAGGTCCTCAGCTCTCTGGGTCACTAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS TCA 72 bp | ACTGTTCATGATGTCCTCCATGATCCCAGCATAGTATaGGAATGGGGTTATCCTCAGGCCCTTGACCATGAT | + |
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Preference number: 6 (lower is better) Translates to: TVHDVLHDPSIV*EWGYPQALDHD Trigger: ATCATGGTCAAGGGCCTGAGGATAACCCCATTCTCATACTATGCTGGGATCATGGAGGACATCATGAACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS CAA 72 bp | TCTATAAGGAAGCTGTCCAGAGACTCATCTGAGAGTTaGCCTACTTCAAACATGGTGACTGCGTGGCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: SIRKLSRDSSES*PTSNMVTAWLF Trigger: GAAAAGCCACGCAGTCACCATGTTTGAAGTAGGCAAACTCTCAGATGAGTCTCTGGACAGCTTCCTTATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS CCA 72 bp | TCTGAGAGTTTGCCTACTTCAAACATGGTGACTGCGTaGCTTTTCAAGTTCGGTGAAAGGTTTCCCATCATT | + |
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Preference number: 6 (lower is better) Translates to: SESLPTSNMVTA*LFKFGERFPII Trigger: AATGATGGGAAACCTTTCACCGAACTTGAAAAGCCACGCAGTCACCATGTTTGAAGTAGGCAAACTCTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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| CDS CAA 90 bp | TTCTCTAATTCTATAAGGAAGCTGTCCAGAGACTCATCTGAGAGTTaGCCTACTTCAAACATGGTGACTGCGTGGCTTTTCAAGTTCGGT | + |
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Preference number: 6 (lower is better) Translates to: FSNSIRKLSRDSSES*PTSNMVTAWLFKFG Trigger: ACCGAACTTGAAAAGCCACGCAGTCACCATGTTTGAAGTAGGCAAACTCTCAGATGAGTCTCTGGACAGCTTCCTTATAGAATTAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037270.5 |
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