Pregenerated sensors for FAM90A1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043549Ensembl transcript IDs: ENSMUST00000044989.12, ENSMUST00000113903.8
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTCGCAGAGATCATTCAGACTTTCCACCAGTGCAGGTATTCGACTaGCAAGCAGATAAAGGCCTGTTTTCTACTAAGGTGCGAGTAAGC | + |
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Preference number: 1 (lower is better) Translates to: GRRDHSDFPPVQVFD*QADKGLFSTKVRVS Trigger: GCTTACTCGCACCTTAGTAGAAAACAGGCCTTTATCTGCTTGGCAGTCGAATACCTGCACTGGTGGAAAGTCTGAATGATCTCTGCGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
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| 3UTR-3UTR CCA 90 bp | ATCTGTAAGTGCAAAAGAACTTTCTTCACTATGGCTTTTACCCACAAGAGCGACAGGACCTGGTTCAACTaGCCCAGTCAGCTTTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: ICKCKRTFFTMAFTHKSDRTWFN*PSQLSL Trigger: CAGAGAAAGCTGACTGGGCCAGTTGAACCAGGTCCT...GTCGCTCTTGTGGGTAAAAGCCATAGTGAAGAAAGTTCTTTTGCACTTACAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
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| 3UTR GCA 72 bp | GATCATTCAGACTTTCCACCAGTGCAGGTATTCGACTaGCAAGCAGATAAAGGCCTGTTTTCTACTAAGGTG | + |
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Preference number: 3 (lower is better) Translates to: DHSDFPPVQVFD*QADKGLFSTKV Trigger: CACCTTAGTAGAAAACAGGCCTTTATCTGCTTGGCAGTCGAATACCTGCACTGGTGGAAAGTCTGAATGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
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| CDS-3UTR GCA 90 bp | TCAACTGGCCCAGTCAGCTTTCTCTGCTCTCCTCCCCTCTACACAACCGGCTTCAGGCCCCACAGTCTCTaGATTTCACCCTGGGATTCT | + |
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Preference number: 4 (lower is better) Translates to: STGPVSFLCSPPLYTTGFRPHSL*ISPWDS Trigger: AGAATCCCAGGGTGAAATGCAGAGACTGTGGGGCCT...GAAGCCGGTTGTGTAGAGGGGAGGAGAGCAGAGAAAGCTGACTGGGCCAGTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
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| CDS-3UTR GCA 90 bp | ACTGTGCAAAGGACCTGGTTCAACTGGCCCAGTCAGCTTTCTCTGCTCTCCTCCGGACTCTGGGGATTCTaGGGCTTCTTCTTTGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: TVQRTWFNWPSQLSLLSSGLWGF*GFFFGS Trigger: GGACCCAAAGAAGAAGCCGCAGAATCCCCAGAGTCC...GGAGGAGAGCAGAGAAAGCTGACTGGGCCAGTTGAACCAGGTCCTTTGCACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
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| CDS-3UTR GCA 90 bp | ACTGTGCAAAGGACCTGGTTCAACTGGCCCAGTCAGCTTTCTCTGCTCTCCTCCGTGTTGTGTGGAGGCTaGTGTTCAACATTGGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: TVQRTWFNWPSQLSLLSSVLCGG*CSTLAP Trigger: AGGGGCCAATGTTGAACAGCAGCCTCCACACAACAC...GGAGGAGAGCAGAGAAAGCTGACTGGGCCAGTTGAACCAGGTCCTTTGCACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
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| CDS-3UTR CCA 90 bp | AACCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCGCGTCTCTGAGCAGCTaGCTCTTTCTGGTTCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: NRLPQVPLRQSLFSSGLLASLSS*LFLVLC Trigger: GCAGAGAACCAGAAAGAGCCAGCTGCTCAGAGACGC...GAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CCA 90 bp | AAGGACCTGGTTCAACTGGCCCAGTCAGCTTTCTCTGCTCTCCTCCCCTCTACACTCTGCATTTCACCCTaGGATTCTCTTCTGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: KDLVQLAQSAFSALLPSTLCISP*DSLLVG Trigger: CCCCACCAGAAGAGAATCCCAGGGTGAAATGCAGAG...TGTAGAGGGGAGGAGAGCAGAGAAAGCTGACTGGGCCAGTTGAACCAGGTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
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| CDS-3UTR CCA 90 bp | ACTGTGCAAAGGACCTGGTTCAACTGGCCCAGTCAGCTTTCTCTGCTCTCCTCCCTGCGGCTTCTTCTTTaGGTCCCGGTTCTCCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: TVQRTWFNWPSQLSLLSSLRLLL*VPVLLF Trigger: GAAAAGGAGAACCGGGACCCAAAGAAGAAGCCGCAG...GGAGGAGAGCAGAGAAAGCTGACTGGGCCAGTTGAACCAGGTCCTTTGCACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
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| CDS-3UTR CCA 90 bp | TCAACTGGCCCAGTCAGCTTTCTCTGCTCTCCTCCCCTCTACACAACCGGCTTCGCTGCTGTTCAACATTaGCCCCTTCAGGTAATCCTG | + |
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Preference number: 4 (lower is better) Translates to: STGPVSFLCSPPLYTTGFAAVQH*PLQVIL Trigger: CAGGATTACCTGAAGGGGCCAATGTTGAACAGCAGC...GAAGCCGGTTGTGTAGAGGGGAGGAGAGCAGAGAAAGCTGACTGGGCCAGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
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| CDS-3UTR TCA 90 bp | CTCACTGTGCAAAGGACCTGGTTCAACTGGCCCAGTCAGCTTTCTCTGCTCTCCTCCTGTTTATACAGATaGATGCTGGTCTGCTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: LTVQRTWFNWPSQLSLLSSCLYR*MLVCSG Trigger: GCCCGAGCAGACCAGCATTCATCTGTATAAACAGGA...GGAGAGCAGAGAAAGCTGACTGGGCCAGTTGAACCAGGTCCTTTGCACAGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
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| CDS-3UTR GCA 90 bp | TCTGCTCTCCTCCCCTCTACACAACCGGCTTCCACAAGTCCCCCTGAGGCAGTCCTCTTTCTGGTTCTCTaGACTCTGACTTTCCATGTT | + |
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Preference number: 4 (lower is better) Translates to: SALLPSTQPASTSPPEAVLFLVL*TLTFHV Trigger: AACATGGAAAGTCAGAGTGCAGAGAACCAGAAAGAG...GACTGCCTCAGGGGGACTTGTGGAAGCCGGTTGTGTAGAGGGGAGGAGAGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
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| CDS-3UTR GCA 90 bp | AACCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCAGGCCCCACAGTCTCTaGATTTCACCCTGGGATTCT | + |
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Preference number: 4 (lower is better) Translates to: NRLPQVPLRQSLFSSGLLRPHSL*ISPWDS Trigger: AGAATCCCAGGGTGAAATGCAGAGACTGTGGGGCCT...GAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR GCA 90 bp | AACCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCGTGTTGTGTGGAGGCTaGTGTTCAACATTGGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: NRLPQVPLRQSLFSSGLLVLCGG*CSTLAP Trigger: AGGGGCCAATGTTGAACAGCAGCCTCCACACAACAC...GAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CCA 90 bp | CGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCTTTGCGTCTCTGAGCAGCTaGCTCTTTCTGGTTCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: RLPQVPLRQSLFSSGLLFASLSS*LFLVLC Trigger: GCAGAGAACCAGAAAGAGCCAGCTGCTCAGAGACGC...AAAGAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CCA 90 bp | AACCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCCTCTGCATTTCACCCTaGGATTCTCTTCTGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: NRLPQVPLRQSLFSSGLLLCISP*DSLLVG Trigger: CCCCACCAGAAGAGAATCCCAGGGTGAAATGCAGAG...GAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CCA 90 bp | CGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCTTTTCTGGCTCAGGACTCTaGGGATTCTGCGGCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: RLPQVPLRQSLFSSGLLFSGSGL*GFCGFF Trigger: GAAGAAGCCGCAGAATCCCCAGAGTCCTGAGCCAGA...AAAGAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CCA 90 bp | AACCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCGTCCTTCCAACTCGGTaGCTTCTTCTCTGGGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: NRLPQVPLRQSLFSSGLLVLPTR*LLLWGF Trigger: AAACCCCCAGAGAAGAAGCCACCGAGTTGGAAGGAC...GAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CCA 90 bp | CAACCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTGTCCTTCCAACTCGGTaGCTTCTTCTCTGGGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: QPASTSPPEAVSLFKWSSVLPTR*LLLWGF Trigger: AAACCCCCAGAGAAGAAGCCACCGAGTTGGAAGGAC...AGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CCA 90 bp | CAACCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTATTCTCACCGACAGCTaGGTCTTCATCACTGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: QPASTSPPEAVSLFKWSSILTDS*VFITVP Trigger: GGGCACAGTGATGAAGACCCAGCTGTCGGTGAGAAT...AGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CCA 90 bp | AACCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCATTCTCACCGACAGCTaGGTCTTCATCACTGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: NRLPQVPLRQSLFSSGLLILTDS*VFITVP Trigger: GGGCACAGTGATGAAGACCCAGCTGTCGGTGAGAAT...GAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CCA 90 bp | ACCTGGTTCAACTGGCCCAGTCAGCTTTCTCTGCTCTCCTCCCCTCTACACAACGCTGGTACTACAACATaGCACAGGATGGGAAGCATC | + |
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Preference number: 4 (lower is better) Translates to: TWFNWPSQLSLLSSPLHNAGTTT*HRMGSI Trigger: GATGCTTCCCATCCTGTGCCATGTTGTAGTACCAGC...GTTGTGTAGAGGGGAGGAGAGCAGAGAAAGCTGACTGGGCCAGTTGAACCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
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| CDS-3UTR TCA 90 bp | CCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCTTTCCTGTTTATACAGATaGATGCTGGTCTGCTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: PASTSPPEAVSLFKWSSLSCLYR*MLVCSG Trigger: GCCCGAGCAGACCAGCATTCATCTGTATAAACAGGA...AAGAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CCA 90 bp | CGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCTTTCTCTGCTTCAGTCTCTaGCTCAGGACTCTGGGGATT | + |
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Preference number: 4 (lower is better) Translates to: RLPQVPLRQSLFSSGLLFLCFSL*LRTLGI Trigger: AATCCCCAGAGTCCTGAGCCAGAGACTGAAGCAGAG...AAAGAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CCA 90 bp | CCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCTTCGGTGGCTTCTTCTCTaGGGGTTTCTTGGGAAATCT | + |
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Preference number: 4 (lower is better) Translates to: PASTSPPEAVSLFKWSSLRWLLL*GFLGKS Trigger: AGATTTCCCAAGAAACCCCCAGAGAAGAAGCCACCG...AAGAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CCA 90 bp | CAACCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTGCTGGTACTACAACATaGCACAGGATGGGAAGCATC | + |
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Preference number: 4 (lower is better) Translates to: QPASTSPPEAVSLFKWSSAGTTT*HRMGSI Trigger: GATGCTTCCCATCCTGTGCCATGTTGTAGTACCAGC...AGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CCA 90 bp | CCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCTTGCTGCTGTTCAACATTaGCCCCTTCAGGTAATCCTG | + |
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Preference number: 4 (lower is better) Translates to: PASTSPPEAVSLFKWSSLAAVQH*PLQVIL Trigger: CAGGATTACCTGAAGGGGCCAATGTTGAACAGCAGC...AAGAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CCA 90 bp | ACCTGGTTCAACTGGCCCAGTCAGCTTTCTCTGCTCTCCTCCCCTCTACACAACGAGAGCTGTGTTGTGTaGAGGCTGCTGTTCAACATT | + |
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Preference number: 4 (lower is better) Translates to: TWFNWPSQLSLLSSPLHNESCVV*RLLFNI Trigger: AATGTTGAACAGCAGCCTCCACACAACACAGCTCTC...GTTGTGTAGAGGGGAGGAGAGCAGAGAAAGCTGACTGGGCCAGTTGAACCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
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| CDS-3UTR TCA 90 bp | ACTGTGCAAAGGACCTGGTTCAACTGGCCCAGTCAGCTTTCTCTGCTCTCCTCCAGGACATCCCAGGTCTaGCATTTTTCTTCCTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: TVQRTWFNWPSQLSLLSSRTSQV*HFSSSR Trigger: TCTTGAGGAAGAAAAATGTCAGACCTGGGATGTCCT...GGAGGAGAGCAGAGAAAGCTGACTGGGCCAGTTGAACCAGGTCCTTTGCACAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
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| CDS-3UTR TCA 90 bp | AACCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCAGTGTGCTGGTCTTCTaGCTGCATGTTAAGCATGCA | + |
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Preference number: 4 (lower is better) Translates to: NRLPQVPLRQSLFSSGLLSVLVF*LHVKHA Trigger: TGCATGCTTAACATGCAGTCAGAAGACCAGCACACT...GAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR GCA 90 bp | CAACCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTTGCTGGTCTTCTGACTaGATGTTAAGCATGCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: QPASTSPPEAVSLFKWSSCWSSD*MLSMQS Trigger: GGACTGCATGCTTAACATGCAGTCAGAAGACCAGCA...AGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR GCA 90 bp | CAACCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCTGGCTATCTGTATGTaGTGCAGAATACAGGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: QPASTSPPEAVSLFKWSSLAICM*CRIQVG Trigger: TCCCACCTGTATTCTGCAGCACATACAGATAGCCAG...AGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CCA 90 bp | CGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCTTTCGGTGGCTTCTTCTCTaGGGGTTTCTTGGGAAATCT | + |
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Preference number: 4 (lower is better) Translates to: RLPQVPLRQSLFSSGLLFRWLLL*GFLGKS Trigger: AGATTTCCCAAGAAACCCCCAGAGAAGAAGCCACCG...AAAGAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR TCA 90 bp | CGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCTTTAGTGTGCTGGTCTTCTaGCTGCATGTTAAGCATGCA | + |
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Preference number: 4 (lower is better) Translates to: RLPQVPLRQSLFSSGLLFSVLVF*LHVKHA Trigger: TGCATGCTTAACATGCAGTCAGAAGACCAGCACACT...AAAGAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR GCA 90 bp | CAACCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTATGCAGTCCATTTCCTaGACTTGGAAGGTATCCTCT | + |
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Preference number: 4 (lower is better) Translates to: QPASTSPPEAVSLFKWSSMQSIS*TWKVSS Trigger: AGAGGATACCTTCCAAGTGCAGGAAATGGACTGCAT...AGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR GCA 90 bp | AACCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCGCTATCTGTATGTGCTaGAGAATACAGGTGGGAATG | + |
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Preference number: 4 (lower is better) Translates to: NRLPQVPLRQSLFSSGLLAICMC*RIQVGM Trigger: CATTCCCACCTGTATTCTGCAGCACATACAGATAGC...GAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CCA 90 bp | ACTGTGCAAAGGACCTGGTTCAACTGGCCCAGTCAGCTTTCTCTGCTCTCCTCCGCTGCAGAATACAGGTaGGAATGTTTGTCTTCATCA | + |
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Preference number: 4 (lower is better) Translates to: TVQRTWFNWPSQLSLLSSAAEYR*ECLSSS Trigger: TGATGAAGACAAACATTCCCACCTGTATTCTGCAGC...GGAGGAGAGCAGAGAAAGCTGACTGGGCCAGTTGAACCAGGTCCTTTGCACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
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| CDS-3UTR CCA 90 bp | CGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCTTTGAGAGCTGTGTTGTGTaGAGGCTGCTGTTCAACATT | + |
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Preference number: 4 (lower is better) Translates to: RLPQVPLRQSLFSSGLLFESCVV*RLLFNI Trigger: AATGTTGAACAGCAGCCTCCACACAACACAGCTCTC...AAAGAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR TCA 90 bp | CAACCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTTGGTTCTCTGCACTCTaGCTTTCCATGTTTTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: QPASTSPPEAVSLFKWSSWFSAL*LSMFLS Trigger: TGACAAAAACATGGAAAGTCAGAGTGCAGAGAACCA...AGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR GCA 90 bp | CAACCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCTCTTTCTGGTTCTCTaGACTCTGACTTTCCATGTT | + |
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Preference number: 4 (lower is better) Translates to: QPASTSPPEAVSLFKWSSLFLVL*TLTFHV Trigger: AACATGGAAAGTCAGAGTGCAGAGAACCAGAAAGAG...AGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR GCA 90 bp | CGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCTTTTTGTCTTCATCAGTGTaGTGGTCTTCTGACTGCATG | + |
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Preference number: 4 (lower is better) Translates to: RLPQVPLRQSLFSSGLLFLSSSV*WSSDCM Trigger: CATGCAGTCAGAAGACCAGCACACTGATGAAGACAA...AAAGAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CCA 90 bp | CCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCTTCAATACTCTATGCTTTaGTCTGTTGGATTCTCACCG | + |
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Preference number: 4 (lower is better) Translates to: PASTSPPEAVSLFKWSSLQYSML*SVGFSP Trigger: CGGTGAGAATCCAACAGACCAAAGCATAGAGTATTG...AAGAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CCA 90 bp | CCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCTTTCTTCATCAGTGTGCTaGTCTTCTGACTGCATGTTA | + |
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Preference number: 4 (lower is better) Translates to: PASTSPPEAVSLFKWSSLSSSVC*SSDCML Trigger: TAACATGCAGTCAGAAGACCAGCACACTGATGAAGA...AAGAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CCA 90 bp | CCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCTTGCTGCAGAATACAGGTaGGAATGTTTGTCTTCATCA | + |
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Preference number: 4 (lower is better) Translates to: PASTSPPEAVSLFKWSSLAAEYR*ECLSSS Trigger: TGATGAAGACAAACATTCCCACCTGTATTCTGCAGC...AAGAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR GCA 90 bp | AAGGACCTGGTTCAACTGGCCCAGTCAGCTTTCTCTGCTCTCCTCCCCTCTACAAGAAGCAATACTCTATaGTTTGGTCTGTTGGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KDLVQLAQSAFSALLPSTRSNTL*FGLLDS Trigger: AGAATCCAACAGACCAAAGCATAGAGTATTGCTTCT...TGTAGAGGGGAGGAGAGCAGAGAAAGCTGACTGGGCCAGTTGAACCAGGTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
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| CDS-3UTR CCA 90 bp | CGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCTTTCAATACTCTATGCTTTaGTCTGTTGGATTCTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: RLPQVPLRQSLFSSGLLFQYSML*SVGFSP Trigger: CGGTGAGAATCCAACAGACCAAAGCATAGAGTATTG...AAAGAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
||
| CDS-3UTR CCA 90 bp | AACCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCAAGTTTCCAAGATCTTaGAGCTCCAGCAGTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: NRLPQVPLRQSLFSSGLLKFPRS*SSSSHF Trigger: AAAATGACTGCTGGAGCTCCAAGATCTTGGAAACTT...GAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
||
| CDS-3UTR GCA 90 bp | AACCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCAGAAGCAATACTCTATaGTTTGGTCTGTTGGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: NRLPQVPLRQSLFSSGLLRSNTL*FGLLDS Trigger: AGAATCCAACAGACCAAAGCATAGAGTATTGCTTCT...GAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
||
| CDS-3UTR CCA 90 bp | ATCTGTAAGTGCAAAAGAACTTTCTTCACTATGGCTTTTACCCACAAGAGCGACTCTGGCTCAGGACTCTaGGGATTCTGCGGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ICKCKRTFFTMAFTHKSDSGSGL*GFCGFF Trigger: GAAGAAGCCGCAGAATCCCCAGAGTCCTGAGCCAGA...GTCGCTCTTGTGGGTAAAAGCCATAGTGAAGAAAGTTCTTTTGCACTTACAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
||
| CDS-3UTR CCA 90 bp | CCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCTTCTCTTTGTAGAATTTTaGATAACCTGGGTATGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PASTSPPEAVSLFKWSSLLFVEF*ITWVWT Trigger: AGTCCATACCCAGGTTATCCAAAATTCTACAAAGAG...AAGAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
||
| CDS-3UTR CCA 90 bp | AGCACACGTACATGCCAACTAGAATTCTCAGACTTCATGTCATGTAAAACTCCTCTCTGCTTCAGTCTCTaGCTCAGGACTCTGGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: STRTCQLEFSDFMSCKTPLCFSL*LRTLGI Trigger: AATCCCCAGAGTCCTGAGCCAGAGACTGAAGCAGAG...AGGAGTTTTACATGACATGAAGTCTGAGAATTCTAGTTGGCATGTACGTGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
||
| CDS-3UTR CCA 90 bp | CGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCTTTCTCTTTGTAGAATTTTaGATAACCTGGGTATGGACT | + |
|
Preference number: 4 (lower is better) Translates to: RLPQVPLRQSLFSSGLLFLFVEF*ITWVWT Trigger: AGTCCATACCCAGGTTATCCAAAATTCTACAAAGAG...AAAGAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
||
| CDS-3UTR GCA 90 bp | ATCTGTAAGTGCAAAAGAACTTTCTTCACTATGGCTTTTACCCACAAGAGCGACTGCTGGTCTTCTGACTaGATGTTAAGCATGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ICKCKRTFFTMAFTHKSDCWSSD*MLSMQS Trigger: GGACTGCATGCTTAACATGCAGTCAGAAGACCAGCA...GTCGCTCTTGTGGGTAAAAGCCATAGTGAAGAAAGTTCTTTTGCACTTACAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
||
| CDS-3UTR GCA 90 bp | ATCTGTAAGTGCAAAAGAACTTTCTTCACTATGGCTTTTACCCACAAGAGCGACCTGGCTATCTGTATGTaGTGCAGAATACAGGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ICKCKRTFFTMAFTHKSDLAICM*CRIQVG Trigger: TCCCACCTGTATTCTGCAGCACATACAGATAGCCAG...GTCGCTCTTGTGGGTAAAAGCCATAGTGAAGAAAGTTCTTTTGCACTTACAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
||
| CDS-3UTR GCA 90 bp | ATCTGTAAGTGCAAAAGAACTTTCTTCACTATGGCTTTTACCCACAAGAGCGACATGCAGTCCATTTCCTaGACTTGGAAGGTATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ICKCKRTFFTMAFTHKSDMQSIS*TWKVSS Trigger: AGAGGATACCTTCCAAGTGCAGGAAATGGACTGCAT...GTCGCTCTTGTGGGTAAAAGCCATAGTGAAGAAAGTTCTTTTGCACTTACAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
||
| CDS-3UTR GCA 90 bp | ATCTGTAAGTGCAAAAGAACTTTCTTCACTATGGCTTTTACCCACAAGAGCGACTTGTCTTCATCAGTGTaGTGGTCTTCTGACTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: ICKCKRTFFTMAFTHKSDLSSSV*WSSDCM Trigger: CATGCAGTCAGAAGACCAGCACACTGATGAAGACAA...GTCGCTCTTGTGGGTAAAAGCCATAGTGAAGAAAGTTCTTTTGCACTTACAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
||
| CDS-3UTR TCA 90 bp | ATCTGTAAGTGCAAAAGAACTTTCTTCACTATGGCTTTTACCCACAAGAGCGACTGGTTCTCTGCACTCTaGCTTTCCATGTTTTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ICKCKRTFFTMAFTHKSDWFSAL*LSMFLS Trigger: TGACAAAAACATGGAAAGTCAGAGTGCAGAGAACCA...GTCGCTCTTGTGGGTAAAAGCCATAGTGAAGAAAGTTCTTTTGCACTTACAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
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| CDS-3UTR CCA 90 bp | AGCACACGTACATGCCAACTAGAATTCTCAGACTTCATGTCATGTAAAACTCCTTCTTCATCAGTGTGCTaGTCTTCTGACTGCATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: STRTCQLEFSDFMSCKTPSSSVC*SSDCML Trigger: TAACATGCAGTCAGAAGACCAGCACACTGATGAAGA...AGGAGTTTTACATGACATGAAGTCTGAGAATTCTAGTTGGCATGTACGTGTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
||
| CDS-3UTR GCA 90 bp | ACATGCCAACTAGAATTCTCAGACTTCATGTCATGTAAAACTCCTTACTGTTTCGCTATCTGTATGTGCTaGAGAATACAGGTGGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: TCQLEFSDFMSCKTPYCFAICMC*RIQVGM Trigger: CATTCCCACCTGTATTCTGCAGCACATACAGATAGC...GAAACAGTAAGGAGTTTTACATGACATGAAGTCTGAGAATTCTAGTTGGCATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
||
| CDS-3UTR CCA 90 bp | AGCACACGTACATGCCAACTAGAATTCTCAGACTTCATGTCATGTAAAACTCCTAAGTTTCCAAGATCTTaGAGCTCCAGCAGTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: STRTCQLEFSDFMSCKTPKFPRS*SSSSHF Trigger: AAAATGACTGCTGGAGCTCCAAGATCTTGGAAACTT...AGGAGTTTTACATGACATGAAGTCTGAGAATTCTAGTTGGCATGTACGTGTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
||
| CDS CCA 90 bp | AAAGGCCCCACAGTCTCTGCATTTCACCCTGGGATTCTCTTCTGGTaGGGGGCGTCTCTGAGCAGCTGGCTCTTTCTGGTTCTCTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: KGPTVSAFHPGILFW*GASLSSWLFLVLCT Trigger: AGTGCAGAGAACCAGAAAGAGCCAGCTGCTCAGAGACGCCCCCCACCAGAAGAGAATCCCAGGGTGAAATGCAGAGACTGTGGGGCCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CAA 90 bp | TCAACTGGCCCAGTCAGCTTTCTCTGCTCTCCTCCCCTCTACACAACCGGCTTCGTCCATTTCCTGCACTaGGAAGGTATCCTCTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: STGPVSFLCSPPLYTTGFVHFLH*EGILWN Trigger: GTTCCAGAGGATACCTTCCAAGTGCAGGAAATGGAC...GAAGCCGGTTGTGTAGAGGGGAGGAGAGCAGAGAAAGCTGACTGGGCCAGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
||
| CDS-3UTR CAA 90 bp | ACCTGGTTCAACTGGCCCAGTCAGCTTTCTCTGCTCTCCTCCCCTCTACACAACTTCTCTGGGGGTTTCTaGGGAAATCTGAGCACGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TWFNWPSQLSLLSSPLHNFSGGF*GNLSTR Trigger: TCTCGTGCTCAGATTTCCCAAGAAACCCCCAGAGAA...GTTGTGTAGAGGGGAGGAGAGCAGAGAAAGCTGACTGGGCCAGTTGAACCAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
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| CDS-3UTR CAA 90 bp | AACCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCGGCTGCTGTTCAACATaGGCCCCTTCAGGTAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: NRLPQVPLRQSLFSSGLLGCCST*APSGNP Trigger: AGGATTACCTGAAGGGGCCAATGTTGAACAGCAGCC...GAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CAA 90 bp | CAACCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTGGCTGCTGTTCAACATaGGCCCCTTCAGGTAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: QPASTSPPEAVSLFKWSSGCCST*APSGNP Trigger: AGGATTACCTGAAGGGGCCAATGTTGAACAGCAGCC...AGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CAA 90 bp | AACCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCTTCAGGAGAGCTGTGTaGTGTGGAGGCTGCTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NRLPQVPLRQSLFSSGLLFRRAV*CGGCCS Trigger: TGAACAGCAGCCTCCACACAACACAGCTCTCCTGAA...GAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CAA 90 bp | CAACCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTTTCTCTGGGGGTTTCTaGGGAAATCTGAGCACGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QPASTSPPEAVSLFKWSSFSGGF*GNLSTR Trigger: TCTCGTGCTCAGATTTCCCAAGAAACCCCCAGAGAA...AGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CAA 90 bp | TCAACTGGCCCAGTCAGCTTTCTCTGCTCTCCTCCCCTCTACACAACCGGCTTCGCAATACTCTATGCTTaGGTCTGTTGGATTCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: STGPVSFLCSPPLYTTGFAILYA*VCWILT Trigger: GGTGAGAATCCAACAGACCAAAGCATAGAGTATTGC...GAAGCCGGTTGTGTAGAGGGGAGGAGAGCAGAGAAAGCTGACTGGGCCAGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
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| CDS-3UTR CAA 90 bp | CCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCTTGCTGAGTTCAGCATCTaGAGCATCCTGGCTATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PASTSPPEAVSLFKWSSLAEFSI*SILAIC Trigger: ACAGATAGCCAGGATGCTCAAGATGCTGAACTCAGC...AAGAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CAA 90 bp | CAACCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTGCTGAGTTCAGCATCTaGAGCATCCTGGCTATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QPASTSPPEAVSLFKWSSAEFSI*SILAIC Trigger: ACAGATAGCCAGGATGCTCAAGATGCTGAACTCAGC...AGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CAA 90 bp | AAGGACCTGGTTCAACTGGCCCAGTCAGCTTTCTCTGCTCTCCTCCCCTCTACAACTTCACCGGTTACCTaGAAGCTGAGTTCAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: KDLVQLAQSAFSALLPSTTSPVT*KLSSAS Trigger: AGATGCTGAACTCAGCTTCAAGGTAACCGGTGAAGT...TGTAGAGGGGAGGAGAGCAGAGAAAGCTGACTGGGCCAGTTGAACCAGGTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
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| CDS CCA 90 bp | CTCACCGACAGCTGGGTCTTCATCACTGTGCCCAGATGCTGTTTTTaGCTCGCTAAGGACATCCCAGGTCTGACATTTTTCTTCCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LTDSWVFITVPRCCF*LAKDIPGLTFFFLK Trigger: CTTGAGGAAGAAAAATGTCAGACCTGGGATGTCCTTAGCGAGCCAAAAACAGCATCTGGGCACAGTGATGAAGACCCAGCTGTCGGTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CAA 90 bp | CAACCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTTACAGGTGGGAATGTTaGTCTTCATCAGTGTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QPASTSPPEAVSLFKWSSYRWEC*SSSVCW Trigger: CCAGCACACTGATGAAGACAAACATTCCCACCTGTA...AGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CAA 90 bp | AACCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCTACAGGTGGGAATGTTaGTCTTCATCAGTGTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NRLPQVPLRQSLFSSGLLYRWEC*SSSVCW Trigger: CCAGCACACTGATGAAGACAAACATTCCCACCTGTA...GAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CAA 90 bp | CCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCTTACTTCACCGGTTACCTaGAAGCTGAGTTCAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: PASTSPPEAVSLFKWSSLTSPVT*KLSSAS Trigger: AGATGCTGAACTCAGCTTCAAGGTAACCGGTGAAGT...AAGAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CAA 90 bp | CCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTCTTGCAATACTCTATGCTTaGGTCTGTTGGATTCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: PASTSPPEAVSLFKWSSLAILYA*VCWILT Trigger: GGTGAGAATCCAACAGACCAAAGCATAGAGTATTGC...AAGAGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CAA 90 bp | AAGGACCTGGTTCAACTGGCCCAGTCAGCTTTCTCTGCTCTCCTCCCCTCTACATCTCTTTGTAGAATTTaGGATAACCTGGGTATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: KDLVQLAQSAFSALLPSTSLCRI*DNLGMD Trigger: GTCCATACCCAGGTTATCCAAAATTCTACAAAGAGA...TGTAGAGGGGAGGAGAGCAGAGAAAGCTGACTGGGCCAGTTGAACCAGGTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
||
| CDS-3UTR CAA 90 bp | CAACCGGCTTCCACAAGTCCCCCTGAGGCAGTCTCTCTTTTCAAGTGGTCTTCTTCTCTTTGTAGAATTTaGGATAACCTGGGTATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: QPASTSPPEAVSLFKWSSSLCRI*DNLGMD Trigger: GTCCATACCCAGGTTATCCAAAATTCTACAAAGAGA...AGAAGACCACTTGAAAAGAGAGACTGCCTCAGGGGGACTTGTGGAAGCCGGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
||
| CDS GCA 90 bp | TACAGGTGGGAATGTTTGTCTTCATCAGTGTGCTGGTCTTCTGACTaGATGTTAAGCATGCAGTCCATTTCCTGCACTTGGAAGGTATCC | + |
|
Preference number: 5 (lower is better) Translates to: YRWECLSSSVCWSSD*MLSMQSISCTWKVS Trigger: GGATACCTTCCAAGTGCAGGAAATGGACTGCATGCTTAACATGCAGTCAGAAGACCAGCACACTGATGAAGACAAACATTCCCACCTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS-3UTR CAA 90 bp | AGCACACGTACATGCCAACTAGAATTCTCAGACTTCATGTCATGTAAAACTCCTTTCAGGAGAGCTGTGTaGTGTGGAGGCTGCTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: STRTCQLEFSDFMSCKTPFRRAV*CGGCCS Trigger: TGAACAGCAGCCTCCACACAACACAGCTCTCCTGAA...AGGAGTTTTACATGACATGAAGTCTGAGAATTCTAGTTGGCATGTACGTGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044989.12 |
||
| CDS TCA 90 bp | CTGTGCCCAGATGCTGTTTTTGGCTCGCTAAGGACATCCCAGGTCTaGCATTTTTCTTCCTCAAGAGGAAAGATAATATCAGTGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LCPDAVFGSLRTSQV*HFSSSRGKIISVSS Trigger: AGAAGACACTGATATTATCTTTCCTCTTGAGGAAGAAAAATGTCAGACCTGGGATGTCCTTAGCGAGCCAAAAACAGCATCTGGGCACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
||
| CDS GCA 90 bp | TTCTTCCTCAAGAGGAAAGATAATATCAGTGTCTTCTGTAGAAGGTaGTGTATGGTACGGCTGGCCATCAGATTTCTCGTCTGCTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: FFLKRKDNISVFCRR*CMVRLAIRFLVCLH Trigger: ATGCAAGCAGACGAGAAATCTGATGGCCAGCCGTACCATACAGCACCTTCTACAGAAGACACTGATATTATCTTTCCTCTTGAGGAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
||
| CDS CCA 90 bp | TCAAGAGGAAAGATAATATCAGTGTCTTCTGTAGAAGGTGCTGTATaGTACGGCTGGCCATCAGATTTCTCGTCTGCTTGCATACTATCC | + |
|
Preference number: 5 (lower is better) Translates to: SRGKIISVSSVEGAV*YGWPSDFSSACILS Trigger: GGATAGTATGCAAGCAGACGAGAAATCTGATGGCCAGCCGTACCATACAGCACCTTCTACAGAAGACACTGATATTATCTTTCCTCTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
||
| CDS CCA 72 bp | ACAGTCTCTGCATTTCACCCTGGGATTCTCTTCTGGTaGGGGGCGTCTCTGAGCAGCTGGCTCTTTCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: TVSAFHPGILFW*GASLSSWLFLV Trigger: AACCAGAAAGAGCCAGCTGCTCAGAGACGCCCCCCACCAGAAGAGAATCCCAGGGTGAAATGCAGAGACTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
||
| CDS CCA 72 bp | ATGTGTCGTGTCCTTCCAACTCGGTGGCTTCTTCTCTaGGGGTTTCTTGGGAAATCTGAGCACGAGAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: MCRVLPTRWLLL*GFLGKSEHESL Trigger: AAGGCTCTCGTGCTCAGATTTCCCAAGAAACCCCCAGAGAAGAAGCCACCGAGTTGGAAGGACACGACACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
||
| CDS CAA 72 bp | CCCAAGGGTAATGGTGCCTTGGCCCCATCCCAACACTaGATAGGACACTTTCTGCTTCTTACAGTGTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PKGNGALAPSQH*IGHFLLLTVCP Trigger: TGGGCACACTGTAAGAAGCAGAAAGTGTCCTATCAAGTGTTGGGATGGGGCCAAGGCACCATTACCCTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
||
| CDS CAA 72 bp | TCCTTCCAACTCGGTGGCTTCTTCTCTGGGGGTTTCTaGGGAAATCTGAGCACGAGAGCCTTCTTCCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SFQLGGFFSGGF*GNLSTRAFFLF Trigger: GAAGAGGAAGAAGGCTCTCGTGCTCAGATTTCCCAAGAAACCCCCAGAGAAGAAGCCACCGAGTTGGAAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
||
| CDS CAA 90 bp | TTCTTTACTCCCAAGGGTAATGGTGCCTTGGCCCCATCCCAACACTaGATAGGACACTTTCTGCTTCTTACAGTGTGCCCAAAGGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: FFTPKGNGALAPSQH*IGHFLLLTVCPKAP Trigger: TGGGGCCTTTGGGCACACTGTAAGAAGCAGAAAGTGTCCTATCAAGTGTTGGGATGGGGCCAAGGCACCATTACCCTTGGGAGTAAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
||
| CDS CAA 90 bp | TGTGTCGTGTCCTTCCAACTCGGTGGCTTCTTCTCTGGGGGTTTCTaGGGAAATCTGAGCACGAGAGCCTTCTTCCTCTTCTCTAGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: CVVSFQLGGFFSGGF*GNLSTRAFFLFSSL Trigger: AAGACTAGAGAAGAGGAAGAAGGCTCTCGTGCTCAGATTTCCCAAGAAACCCCCAGAGAAGAAGCCACCGAGTTGGAAGGACACGACACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
||
| CDS CAA 72 bp | AGGAGAGCTGTGTTGTGTGGAGGCTGCTGTTCAACATaGGCCCCTTCAGGTAATCCTGTTGGTTCAACACTG | + |
|
Preference number: 6 (lower is better) Translates to: RRAVLCGGCCST*APSGNPVGSTL Trigger: CAGTGTTGAACCAACAGGATTACCTGAAGGGGCCAATGTTGAACAGCAGCCTCCACACAACACAGCTCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS TCA 72 bp | TCGGTGGCTTCTTCTCTGGGGGTTTCTTGGGAAATCTaGGCACGAGAGCCTTCTTCCTCTTCTCTAGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: SVASSLGVSWEI*AREPSSSSLVF Trigger: AAAGACTAGAGAAGAGGAAGAAGGCTCTCGTGCTCAGATTTCCCAAGAAACCCCCAGAGAAGAAGCCACCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS CCA 72 bp | ATAGTCACCAGAATGTGTCGTGTCCTTCCAACTCGGTaGCTTCTTCTCTGGGGGTTTCTTGGGAAATCTGAG | + |
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Preference number: 6 (lower is better) Translates to: IVTRMCRVLPTR*LLLWGFLGKSE Trigger: CTCAGATTTCCCAAGAAACCCCCAGAGAAGAAGCCACCGAGTTGGAAGGACACGACACATTCTGGTGACTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS CCA 72 bp | AGCTGGGTCTTCATCACTGTGCCCAGATGCTGTTTTTaGCTCGCTAAGGACATCCCAGGTCTGACATTTTTC | + |
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Preference number: 6 (lower is better) Translates to: SWVFITVPRCCF*LAKDIPGLTFF Trigger: GAAAAATGTCAGACCTGGGATGTCCTTAGCGAGCCAAAAACAGCATCTGGGCACAGTGATGAAGACCCAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS CCA 72 bp | CTCTATGCTTTGGTCTGTTGGATTCTCACCGACAGCTaGGTCTTCATCACTGTGCCCAGATGCTGTTTTTGG | + |
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Preference number: 6 (lower is better) Translates to: LYALVCWILTDS*VFITVPRCCFW Trigger: CCAAAAACAGCATCTGGGCACAGTGATGAAGACCCAGCTGTCGGTGAGAATCCAACAGACCAAAGCATAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS CCA 72 bp | GGTTCAACACTGCTGGTACTACAACATGGCACAGGATaGGAAGCATCCAACATAGGCCTTTTGGTGCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: GSTLLVLQHGTG*EASNIGLLVLF Trigger: GAAGAGCACCAAAAGGCCTATGTTGGATGCTTCCCATCCTGTGCCATGTTGTAGTACCAGCAGTGTTGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS CAA 90 bp | TCCCGGTTCTCCTTTTCCTTCTTTACTCCCAAGGGTAATGGTGCCTaGGCCCCATCCCAACACTTGATAGGACACTTTCTGCTTCTTACA | + |
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Preference number: 6 (lower is better) Translates to: SRFSFSFFTPKGNGA*APSQHLIGHFLLLT Trigger: TGTAAGAAGCAGAAAGTGTCCTATCAAGTGTTGGGATGGGGCCAAGGCACCATTACCCTTGGGAGTAAAGAAGGAAAAGGAGAACCGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS CAA 90 bp | GTGAAATTCAGGAGAGCTGTGTTGTGTGGAGGCTGCTGTTCAACATaGGCCCCTTCAGGTAATCCTGTTGGTTCAACACTGCTGGTACTA | + |
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Preference number: 6 (lower is better) Translates to: VKFRRAVLCGGCCST*APSGNPVGSTLLVL Trigger: TAGTACCAGCAGTGTTGAACCAACAGGATTACCTGAAGGGGCCAATGTTGAACAGCAGCCTCCACACAACACAGCTCTCCTGAATTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS GCA 72 bp | AGGTATCCTCTGGAACCGGATAGAAGCAATACTCTATaGTTTGGTCTGTTGGATTCTCACCGACAGCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: RYPLEPDRSNTL*FGLLDSHRQLG Trigger: ACCCAGCTGTCGGTGAGAATCCAACAGACCAAAGCATAGAGTATTGCTTCTATCCGGTTCCAGAGGATACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS CCA 72 bp | TCAGTGTCTTCTGTAGAAGGTGCTGTATGGTACGGCTaGCCATCAGATTTCTCGTCTGCTTGCATACTATCC | + |
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Preference number: 6 (lower is better) Translates to: SVSSVEGAVWYG*PSDFSSACILS Trigger: GGATAGTATGCAAGCAGACGAGAAATCTGATGGCCAGCCGTACCATACAGCACCTTCTACAGAAGACACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS CAA 72 bp | TCCTTTTCCTTCTTTACTCCCAAGGGTAATGGTGCCTaGGCCCCATCCCAACACTTGATAGGACACTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: SFSFFTPKGNGA*APSQHLIGHFL Trigger: CAGAAAGTGTCCTATCAAGTGTTGGGATGGGGCCAAGGCACCATTACCCTTGGGAGTAAAGAAGGAAAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS CAA 90 bp | GCATCCTGGCTATCTGTATGTGCTGCAGAATACAGGTGGGAATGTTaGTCTTCATCAGTGTGCTGGTCTTCTGACTGCATGTTAAGCATG | + |
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Preference number: 6 (lower is better) Translates to: ASWLSVCAAEYRWEC*SSSVCWSSDCMLSM Trigger: CATGCTTAACATGCAGTCAGAAGACCAGCACACTGATGAAGACAAACATTCCCACCTGTATTCTGCAGCACATACAGATAGCCAGGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS TCA 72 bp | GAGTATCGCTCAGGAATAATTTCCTGTTTATACAGATaGATGCTGGTCTGCTCGGGCGCCTCAGATAGTCAC | + |
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Preference number: 6 (lower is better) Translates to: EYRSGIISCLYR*MLVCSGASDSH Trigger: GTGACTATCTGAGGCGCCCGAGCAGACCAGCATTCATCTGTATAAACAGGAAATTATTCCTGAGCGATACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS TCA 72 bp | GTGGGAATGTTTGTCTTCATCAGTGTGCTGGTCTTCTaGCTGCATGTTAAGCATGCAGTCCATTTCCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: VGMFVFISVLVF*LHVKHAVHFLH Trigger: GTGCAGGAAATGGACTGCATGCTTAACATGCAGTCAGAAGACCAGCACACTGATGAAGACAAACATTCCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS CCA 72 bp | GCATCCTGGCTATCTGTATGTGCTGCAGAATACAGGTaGGAATGTTTGTCTTCATCAGTGTGCTGGTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: ASWLSVCAAEYR*ECLSSSVCWSS Trigger: AGAAGACCAGCACACTGATGAAGACAAACATTCCCACCTGTATTCTGCAGCACATACAGATAGCCAGGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS CAA 72 bp | GACTTCACCGGTTACCTTGAAGCTGAGTTCAGCATCTaGAGCATCCTGGCTATCTGTATGTGCTGCAGAATA | + |
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Preference number: 6 (lower is better) Translates to: DFTGYLEAEFSI*SILAICMCCRI Trigger: TATTCTGCAGCACATACAGATAGCCAGGATGCTCAAGATGCTGAACTCAGCTTCAAGGTAACCGGTGAAGTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS GCA 72 bp | GAATGTTTGTCTTCATCAGTGTGCTGGTCTTCTGACTaGATGTTAAGCATGCAGTCCATTTCCTGCACTTGG | + |
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Preference number: 6 (lower is better) Translates to: ECLSSSVCWSSD*MLSMQSISCTW Trigger: CCAAGTGCAGGAAATGGACTGCATGCTTAACATGCAGTCAGAAGACCAGCACACTGATGAAGACAAACATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS CCA 72 bp | AAGATAATATCAGTGTCTTCTGTAGAAGGTGCTGTATaGTACGGCTGGCCATCAGATTTCTCGTCTGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: KIISVSSVEGAV*YGWPSDFSSAC Trigger: GCAAGCAGACGAGAAATCTGATGGCCAGCCGTACCATACAGCACCTTCTACAGAAGACACTGATATTATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS CAA 72 bp | CTATCTGTATGTGCTGCAGAATACAGGTGGGAATGTTaGTCTTCATCAGTGTGCTGGTCTTCTGACTGCATG | + |
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Preference number: 6 (lower is better) Translates to: LSVCAAEYRWEC*SSSVCWSSDCM Trigger: CATGCAGTCAGAAGACCAGCACACTGATGAAGACAAACATTCCCACCTGTATTCTGCAGCACATACAGATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS GCA 72 bp | AAGAGGAAAGATAATATCAGTGTCTTCTGTAGAAGGTaGTGTATGGTACGGCTGGCCATCAGATTTCTCGTC | + |
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Preference number: 6 (lower is better) Translates to: KRKDNISVFCRR*CMVRLAIRFLV Trigger: GACGAGAAATCTGATGGCCAGCCGTACCATACAGCACCTTCTACAGAAGACACTGATATTATCTTTCCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS CCA 72 bp | GAATACAGGTGGGAATGTTTGTCTTCATCAGTGTGCTaGTCTTCTGACTGCATGTTAAGCATGCAGTCCATT | + |
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Preference number: 6 (lower is better) Translates to: EYRWECLSSSVC*SSDCMLSMQSI Trigger: AATGGACTGCATGCTTAACATGCAGTCAGAAGACCAGCACACTGATGAAGACAAACATTCCCACCTGTATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS CCA 72 bp | CGAAATCTCTTTGTAGAATTTTGGATAACCTGGGTATaGACTTCACCGGTTACCTTGAAGCTGAGTTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: RNLFVEFWITWV*TSPVTLKLSSA Trigger: TGCTGAACTCAGCTTCAAGGTAACCGGTGAAGTCCATACCCAGGTTATCCAAAATTCTACAAAGAGATTTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS TCA 72 bp | TGGCCATCAGATTTCTCGTCTGCTTGCATACTATCCTaGGTATCGCTCAGGAATAATTTCCTGTTTATACAG | + |
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Preference number: 6 (lower is better) Translates to: WPSDFSSACILS*VSLRNNFLFIQ Trigger: CTGTATAAACAGGAAATTATTCCTGAGCGATACTCAGGATAGTATGCAAGCAGACGAGAAATCTGATGGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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| CDS CCA 72 bp | CTTAGTCGAAATCTCTTTGTAGAATTTTGGATAACCTaGGTATGGACTTCACCGGTTACCTTGAAGCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: LSRNLFVEFWIT*VWTSPVTLKLS Trigger: ACTCAGCTTCAAGGTAACCGGTGAAGTCCATACCCAGGTTATCCAAAATTCTACAAAGAGATTTCGACTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044989.12 ENSMUST00000113903.8 |
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