Pregenerated sensors for FAM90A1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079112Ensembl transcript IDs: ENSMUST00000110741.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGGACATACTAGAGGTCACTGATGACAAGAGTGGAGAGGACAGGTaGCCTTCAGAGTGCTTCTTAGAGGCATACCTCAGAGTCCAGAGA | + |
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Preference number: 1 (lower is better) Translates to: KDILEVTDDKSGEDR*PSECFLEAYLRVQR Trigger: TCTCTGGACTCTGAGGTATGCCTCTAAGAAGCACTCTGAAGGTCACCTGTCCTCTCCACTCTTGTCATCAGTGACCTCTAGTATGTCCTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| 3UTR TCA 90 bp | GATGTGGTCCCAACCCACTATAGGAGTGCTCATTTGGAAGTACCCTaGCATGATACAGTCATGTCATCTACCAGGTTAATTCGGGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: DVVPTHYRSAHLEVP*HDTVMSSTRLIRER Trigger: CCTCTCCCGAATTAACCTGGTAGATGACATGACTGTATCATGTCAGGGTACTTCCAAATGAGCACTCCTATAGTGGGTTGGGACCACATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| 3UTR-3UTR CCA 90 bp | GTCATCTACCAGGTTAATTCGGGAGAGGATCAGTCTGAAAGAATTTGGCCAGTCTGGTGGTGGTGGTGTTaGTGTCTGCTCTTCATGTGG | + |
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Preference number: 2 (lower is better) Translates to: VIYQVNSGEDQSERIWPVWWWWC*CLLFMW Trigger: CCACATGAAGAGCAGACACCAACACCACCACCACCA...GACTGGCCAAATTCTTTCAGACTGATCCTCTCCCGAATTAACCTGGTAGATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| 3UTR-3UTR CAA 90 bp | TCCAGAGATCATGCTGAGGTGAGGCTAGTTGCAAAGAGAGGAAAGGGATGTGGTGTGGTGGTGGTGGTGTaGGTGTCTGCTCTTCATGTG | + |
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Preference number: 3 (lower is better) Translates to: SRDHAEVRLVAKRGKGCGVVVVV*VSALHV Trigger: CACATGAAGAGCAGACACCAACACCACCACCACCAC...ACCACATCCCTTTCCTCTCTTTGCAACTAGCCTCACCTCAGCATGATCTCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| 3UTR TCA 72 bp | CTAGAGGTCACTGATGACAAGAGTGGAGAGGACAGGTaGCCTTCAGAGTGCTTCTTAGAGGCATACCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: LEVTDDKSGEDR*PSECFLEAYLR Trigger: TCTGAGGTATGCCTCTAAGAAGCACTCTGAAGGTCACCTGTCCTCTCCACTCTTGTCATCAGTGACCTCTAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| 3UTR TCA 72 bp | TTCTTAGAGGCATACCTCAGAGTCCAGAGATCATGCTaGGGTGAGGCTAGTTGCAAAGAGAGGAAAGGGATG | + |
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Preference number: 3 (lower is better) Translates to: FLEAYLRVQRSC*GEASCKERKGM Trigger: CATCCCTTTCCTCTCTTTGCAACTAGCCTCACCTCAGCATGATCTCTGGACTCTGAGGTATGCCTCTAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR GCA 90 bp | CATGCTGAGGTGAGGCTAGTTGCAAAGAGAGGAAAGGGATGTGGTCCCAACCCAGGATGCTGGCTGGGCTaGGTTTTCCTACTGGGACCC | + |
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Preference number: 4 (lower is better) Translates to: HAEVRLVAKRGKGCGPNPGCWLG*VFLLGP Trigger: GGGTCCCAGTAGGAAAACGCAGCCCAGCCAGCATCC...TGGGTTGGGACCACATCCCTTTCCTCTCTTTGCAACTAGCCTCACCTCAGCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR TCA 90 bp | AGAGGACAGGTGACCTTCAGAGTGCTTCTTAGAGGCATACCTCAGAGTCCAGAGTCTCCCTGGGCTGTTTaGGCTGGAACAGCTGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: RGQVTFRVLLRGIPQSPESPWAV*AGTAGR Trigger: CCTTCCAGCTGTTCCAGCTCAAACAGCCCAGGGAGA...CTCTGGACTCTGAGGTATGCCTCTAAGAAGCACTCTGAAGGTCACCTGTCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR CCA 90 bp | CATGCTGAGGTGAGGCTAGTTGCAAAGAGAGGAAAGGGATGTGGTCCCAACCCATCTCTTTCTCCTTCCTaGCTCCCAGAGGCTGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: HAEVRLVAKRGKGCGPNPSLSPS*LPEAGR Trigger: TCTCCCAGCCTCTGGGAGCCAGGAAGGAGAAAGAGA...TGGGTTGGGACCACATCCCTTTCCTCTCTTTGCAACTAGCCTCACCTCAGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR CCA 90 bp | AGAGGACAGGTGACCTTCAGAGTGCTTCTTAGAGGCATACCTCAGAGTCCAGAGGATCCCAGGGATGCTTaGCATCCGTGGCTGAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: RGQVTFRVLLRGIPQSPEDPRDA*HPWLSQ Trigger: TTGGCTCAGCCACGGATGCCAAGCATCCCTGGGATC...CTCTGGACTCTGAGGTATGCCTCTAAGAAGCACTCTGAAGGTCACCTGTCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR CCA 90 bp | CAAGAGTGGAGAGGACAGGTGACCTTCAGAGTGCTTCTTAGAGGCATACCTCAGTGTCCAGGGTGCCCTTaGAACCAGTCCTTGCATGGC | + |
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Preference number: 4 (lower is better) Translates to: QEWRGQVTFRVLLRGIPQCPGCP*NQSLHG Trigger: GCCATGCAAGGACTGGTTCCAAGGGCACCCTGGACA...CTGAGGTATGCCTCTAAGAAGCACTCTGAAGGTCACCTGTCCTCTCCACTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR GCA 90 bp | CAAGAGTGGAGAGGACAGGTGACCTTCAGAGTGCTTCTTAGAGGCATACCTCAGTGGTGGATGACAGGATaGTGGCTGGGCTGCGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: QEWRGQVTFRVLLRGIPQWWMTG*WLGCVF Trigger: GAAAACGCAGCCCAGCCAGCATCCTGTCATCCACCA...CTGAGGTATGCCTCTAAGAAGCACTCTGAAGGTCACCTGTCCTCTCCACTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR CCA 90 bp | AGAGGACAGGTGACCTTCAGAGTGCTTCTTAGAGGCATACCTCAGAGTCCAGAGCTGGGCTGTTTGAGCTaGAACAGCTGGAAGGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: RGQVTFRVLLRGIPQSPELGCLS*NSWKAL Trigger: AAGGGCCTTCCAGCTGTTCCAGCTCAAACAGCCCAG...CTCTGGACTCTGAGGTATGCCTCTAAGAAGCACTCTGAAGGTCACCTGTCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR TCA 90 bp | CAAGAGTGGAGAGGACAGGTGACCTTCAGAGTGCTTCTTAGAGGCATACCTCAGATGCACTCCTCTTTCTaGTCCCAGGGATGCTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: QEWRGQVTFRVLLRGIPQMHSSF*SQGCLA Trigger: TGCCAAGCATCCCTGGGATCAGAAAGAGGAGTGCAT...CTGAGGTATGCCTCTAAGAAGCACTCTGAAGGTCACCTGTCCTCTCCACTCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR TCA 90 bp | TCTACCAGGTTAATTCGGGAGAGGATCAGTCTGAAAGAATTTGGCCAGTCTGAGGCAATGGGAGGAGACTaGCTGTCCAGGGTGCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: STRLIRERISLKEFGQSEAMGGD*LSRVPL Trigger: CAAGGGCACCCTGGACAGTCAGTCTCCTCCCATTGC...CTCAGACTGGCCAAATTCTTTCAGACTGATCCTCTCCCGAATTAACCTGGTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR TCA 90 bp | TCTACCAGGTTAATTCGGGAGAGGATCAGTCTGAAAGAATTTGGCCAGTCTGAGAAGTGGTGGGGGCACTaGCAGGAACCTGGAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: STRLIRERISLKEFGQSEKWWGH*QEPGAP Trigger: TGGAGCTCCAGGTTCCTGTCAGTGCCCCCACCACTT...CTCAGACTGGCCAAATTCTTTCAGACTGATCCTCTCCCGAATTAACCTGGTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR GCA 90 bp | TCTACCAGGTTAATTCGGGAGAGGATCAGTCTGAAAGAATTTGGCCAGTCTGAGTCTCAGGGCTTGGTCTaGAACACGGCCAGCGGATGC | + |
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Preference number: 4 (lower is better) Translates to: STRLIRERISLKEFGQSESQGLV*NTASGC Trigger: GCATCCGCTGGCCGTGTTGCAGACCAAGCCCTGAGA...CTCAGACTGGCCAAATTCTTTCAGACTGATCCTCTCCCGAATTAACCTGGTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR CCA 90 bp | AGAGGACAGGTGACCTTCAGAGTGCTTCTTAGAGGCATACCTCAGAGTCCAGAGAGTTTCTGTAGACCATaGGGCCTGCAAGGATCCCCA | + |
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Preference number: 4 (lower is better) Translates to: RGQVTFRVLLRGIPQSPESFCRP*GLQGSP Trigger: TGGGGATCCTTGCAGGCCCCATGGTCTACAGAAACT...CTCTGGACTCTGAGGTATGCCTCTAAGAAGCACTCTGAAGGTCACCTGTCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR CCA 90 bp | TCCAGAGATCATGCTGAGGTGAGGCTAGTTGCAAAGAGAGGAAAGGGATGTGGTCCAGCGGATGCCCTGTaGAACTCTATACAGGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: SRDHAEVRLVAKRGKGCGPADAL*NSIQGL Trigger: CAGACCCTGTATAGAGTTCCACAGGGCATCCGCTGG...ACCACATCCCTTTCCTCTCTTTGCAACTAGCCTCACCTCAGCATGATCTCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR TCA 90 bp | TCAGAGTCCAGAGATCATGCTGAGGTGAGGCTAGTTGCAAAGAGAGGAAAGGGATTCTTCCATCCTGCCTaGGCACTAGCTTGGCAACAC | + |
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Preference number: 4 (lower is better) Translates to: SESRDHAEVRLVAKRGKGFFHPA*ALAWQH Trigger: GTGTTGCCAAGCTAGTGCTCAGGCAGGATGGAAGAA...TCCCTTTCCTCTCTTTGCAACTAGCCTCACCTCAGCATGATCTCTGGACTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR GCA 90 bp | CAAGAGTGGAGAGGACAGGTGACCTTCAGAGTGCTTCTTAGAGGCATACCTCAGGAGTTTCTTCCATCCTaGCTGAGCACTAGCTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: QEWRGQVTFRVLLRGIPQEFLPS*LSTSLA Trigger: TGCCAAGCTAGTGCTCAGGCAGGATGGAAGAAACTC...CTGAGGTATGCCTCTAAGAAGCACTCTGAAGGTCACCTGTCCTCTCCACTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR CCA 90 bp | GTCATCTACCAGGTTAATTCGGGAGAGGATCAGTCTGAAAGAATTTGGCCAGTCGCCAAGTTGACCTGCTaGTCCCCCTTTTGCGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: VIYQVNSGEDQSERIWPVAKLTC*SPFCGF Trigger: GAAGCCGCAAAAGGGGGACCAGCAGGTCAACTTGGC...GACTGGCCAAATTCTTTCAGACTGATCCTCTCCCGAATTAACCTGGTAGATGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR TCA 90 bp | GTCATCTACCAGGTTAATTCGGGAGAGGATCAGTCTGAAAGAATTTGGCCAGTCGTCTATTCTGGTGGATaGCAGGATGCTGGCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: VIYQVNSGEDQSERIWPVVYSGG*QDAGWA Trigger: AGCCCAGCCAGCATCCTGTCATCCACCAGAATAGAC...GACTGGCCAAATTCTTTCAGACTGATCCTCTCCCGAATTAACCTGGTAGATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR CCA 90 bp | TCTACCAGGTTAATTCGGGAGAGGATCAGTCTGAAAGAATTTGGCCAGTCTGAGTTCCTACTGGGACCCTaGGCTTTCGGCTCTTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: STRLIRERISLKEFGQSEFLLGP*AFGSLW Trigger: CCACAAAGAGCCGAAAGCCCAGGGTCCCAGTAGGAA...CTCAGACTGGCCAAATTCTTTCAGACTGATCCTCTCCCGAATTAACCTGGTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR CCA 90 bp | TCCAGAGATCATGCTGAGGTGAGGCTAGTTGCAAAGAGAGGAAAGGGATGTGGTGAACCAGTCCTTGCATaGCTCTTCTCTGGTGCATCT | + |
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Preference number: 4 (lower is better) Translates to: SRDHAEVRLVAKRGKGCGEPVLA*LFSGAS Trigger: AGATGCACCAGAGAAGAGCCATGCAAGGACTGGTTC...ACCACATCCCTTTCCTCTCTTTGCAACTAGCCTCACCTCAGCATGATCTCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR CCA 90 bp | AGAGGACAGGTGACCTTCAGAGTGCTTCTTAGAGGCATACCTCAGAGTCCAGAGGTTGTTGGTCAGTGCTaGGATCCTGGGCTGTTATTT | + |
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Preference number: 4 (lower is better) Translates to: RGQVTFRVLLRGIPQSPEVVGQC*DPGLLF Trigger: AAATAACAGCCCAGGATCCCAGCACTGACCAACAAC...CTCTGGACTCTGAGGTATGCCTCTAAGAAGCACTCTGAAGGTCACCTGTCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR TCA 90 bp | TCTACCAGGTTAATTCGGGAGAGGATCAGTCTGAAAGAATTTGGCCAGTCTGAGAAGTGTCTGTTCCCATaGGCTTCTTGGCTCTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: STRLIRERISLKEFGQSEKCLFP*ASWLSL Trigger: CAGGGAGAGCCAAGAAGCTCATGGGAACAGACACTT...CTCAGACTGGCCAAATTCTTTCAGACTGATCCTCTCCCGAATTAACCTGGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR TCA 90 bp | TCAGAGTCCAGAGATCATGCTGAGGTGAGGCTAGTTGCAAAGAGAGGAAAGGGATACTACCGTGTCTGGTaGAGATCATTCTCAGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SESRDHAEVRLVAKRGKGYYRVW*RSFSGL Trigger: AAGCCCTGAGAATGATCTTCACCAGACACGGTAGTA...TCCCTTTCCTCTCTTTGCAACTAGCCTCACCTCAGCATGATCTCTGGACTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR GCA 90 bp | GTCATCTACCAGGTTAATTCGGGAGAGGATCAGTCTGAAAGAATTTGGCCAGTCGTAGACCATGGGGCCTaGAAGGATCCCCATTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: VIYQVNSGEDQSERIWPVVDHGA*KDPHSL Trigger: AAGAGAATGGGGATCCTTGCAGGCCCCATGGTCTAC...GACTGGCCAAATTCTTTCAGACTGATCCTCTCCCGAATTAACCTGGTAGATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR GCA 90 bp | CAAGAGTGGAGAGGACAGGTGACCTTCAGAGTGCTTCTTAGAGGCATACCTCAGTGTTTTGACTGGAGATaGACTCCTCTTTCTGATCCC | + |
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Preference number: 4 (lower is better) Translates to: QEWRGQVTFRVLLRGIPQCFDWR*TPLSDP Trigger: GGGATCAGAAAGAGGAGTGCATCTCCAGTCAAAACA...CTGAGGTATGCCTCTAAGAAGCACTCTGAAGGTCACCTGTCCTCTCCACTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR GCA 90 bp | TCTACCAGGTTAATTCGGGAGAGGATCAGTCTGAAAGAATTTGGCCAGTCTGAGCTTGGAACCAGTCCTTaGATGGCTCTTCTCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: STRLIRERISLKEFGQSELGTSP*MALLWC Trigger: GCACCAGAGAAGAGCCATGCAAGGACTGGTTCCAAG...CTCAGACTGGCCAAATTCTTTCAGACTGATCCTCTCCCGAATTAACCTGGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR CCA 90 bp | TCCAGAGATCATGCTGAGGTGAGGCTAGTTGCAAAGAGAGGAAAGGGATGTGGTCTGCTTCTTACATTGTaGCCAAAGCCCCCACAGTTT | + |
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Preference number: 4 (lower is better) Translates to: SRDHAEVRLVAKRGKGCGLLLTL*PKPPQF Trigger: AAACTGTGGGGGCTTTGGCCACAATGTAAGAAGCAG...ACCACATCCCTTTCCTCTCTTTGCAACTAGCCTCACCTCAGCATGATCTCTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR CCA 90 bp | CATGCTGAGGTGAGGCTAGTTGCAAAGAGAGGAAAGGGATGTGGTCCCAACCCATTCATTGGAAATTTCTaGAAGGGAGCTTTCCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: HAEVRLVAKRGKGCGPNPFIGNF*KGAFLC Trigger: GCAGAGGAAAGCTCCCTTCCAGAAATTTCCAATGAA...TGGGTTGGGACCACATCCCTTTCCTCTCTTTGCAACTAGCCTCACCTCAGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR CCA 90 bp | TCAGAGTCCAGAGATCATGCTGAGGTGAGGCTAGTTGCAAAGAGAGGAAAGGGAGACCTTCCTTCTGCCTaGAATGTAAGATGTAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SESRDHAEVRLVAKRGKGDLPSA*NVRCRS Trigger: GCTCCTACATCTTACATTCCAGGCAGAAGGAAGGTC...TCCCTTTCCTCTCTTTGCAACTAGCCTCACCTCAGCATGATCTCTGGACTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR CCA 90 bp | CAAGAGTGGAGAGGACAGGTGACCTTCAGAGTGCTTCTTAGAGGCATACCTCAGTTTTGTCTATTCTGGTaGATGACAGGATGCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: QEWRGQVTFRVLLRGIPQFCLFW*MTGCWL Trigger: CAGCCAGCATCCTGTCATCCACCAGAATAGACAAAA...CTGAGGTATGCCTCTAAGAAGCACTCTGAAGGTCACCTGTCCTCTCCACTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR CCA 90 bp | TCCAGAGATCATGCTGAGGTGAGGCTAGTTGCAAAGAGAGGAAAGGGATGTGGTGGGTTTTGTCTATTCTaGTGGATGACAGGATGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SRDHAEVRLVAKRGKGCGGFCLF*WMTGCW Trigger: CCAGCATCCTGTCATCCACCAGAATAGACAAAACCC...ACCACATCCCTTTCCTCTCTTTGCAACTAGCCTCACCTCAGCATGATCTCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR CCA 90 bp | CAGGTGACCTTCAGAGTGCTTCTTAGAGGCATACCTCAGAGTCCAGAGATCATGCTATATAGCTGTTGTTaGTCAGTGCTGGGATCCTGG | + |
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Preference number: 4 (lower is better) Translates to: QVTFRVLLRGIPQSPEIMLYSCC*SVLGSW Trigger: CCAGGATCCCAGCACTGACCAACAACAGCTATATAG...CATGATCTCTGGACTCTGAGGTATGCCTCTAAGAAGCACTCTGAAGGTCACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR TCA 90 bp | TCCAGAGATCATGCTGAGGTGAGGCTAGTTGCAAAGAGAGGAAAGGGATGTGGTGTTCTCCTTTTTCAGTaGTGGAAGTGTCTGTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: SRDHAEVRLVAKRGKGCGVLLFQ*WKCLFP Trigger: TGGGAACAGACACTTCCATCACTGAAAAAGGAGAAC...ACCACATCCCTTTCCTCTCTTTGCAACTAGCCTCACCTCAGCATGATCTCTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR GCA 90 bp | TCAGAGTCCAGAGATCATGCTGAGGTGAGGCTAGTTGCAAAGAGAGGAAAGGGATCATGGGGCACATTCTaGTTCTTACATTGTGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: SESRDHAEVRLVAKRGKGSWGTF*FLHCGQ Trigger: TTGGCCACAATGTAAGAAGCAGAATGTGCCCCATGA...TCCCTTTCCTCTCTTTGCAACTAGCCTCACCTCAGCATGATCTCTGGACTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR GCA 90 bp | TCAGAGTCCAGAGATCATGCTGAGGTGAGGCTAGTTGCAAAGAGAGGAAAGGGAGAACAGTTCACTGCTTaGATTACTTTTGGGGACAGC | + |
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Preference number: 4 (lower is better) Translates to: SESRDHAEVRLVAKRGKGEQFTA*ITFGDS Trigger: GCTGTCCCCAAAAGTAATGCAAGCAGTGAACTGTTC...TCCCTTTCCTCTCTTTGCAACTAGCCTCACCTCAGCATGATCTCTGGACTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR CCA 90 bp | CAGGTGACCTTCAGAGTGCTTCTTAGAGGCATACCTCAGAGTCCAGAGATCATGTGCTTGCATTACTTTTaGGGACAGCAACTGGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: QVTFRVLLRGIPQSPEIMCLHYF*GQQLGV Trigger: AACACCCAGTTGCTGTCCCCAAAAGTAATGCAAGCA...CATGATCTCTGGACTCTGAGGTATGCCTCTAAGAAGCACTCTGAAGGTCACCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR CCA 90 bp | TCCAGAGATCATGCTGAGGTGAGGCTAGTTGCAAAGAGAGGAAAGGGATGTGGTTGCATGGCTCTTCTCTaGTGCATCTGTAGAGTTAAG | + |
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Preference number: 4 (lower is better) Translates to: SRDHAEVRLVAKRGKGCGCMALL*CICRVK Trigger: CTTAACTCTACAGATGCACCAGAGAAGAGCCATGCA...ACCACATCCCTTTCCTCTCTTTGCAACTAGCCTCACCTCAGCATGATCTCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR TCA 90 bp | GTCATCTACCAGGTTAATTCGGGAGAGGATCAGTCTGAAAGAATTTGGCCAGTCTCCCAAGAGATGTTTTaGCTGGAGATGCACTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: VIYQVNSGEDQSERIWPVSQEMF*LEMHSS Trigger: AGAGGAGTGCATCTCCAGTCAAAACATCTCTTGGGA...GACTGGCCAAATTCTTTCAGACTGATCCTCTCCCGAATTAACCTGGTAGATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR GCA 90 bp | TCTACCAGGTTAATTCGGGAGAGGATCAGTCTGAAAGAATTTGGCCAGTCTGAGAGCCCCCACAGTTTCTaGATTTCACCATATGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: STRLIRERISLKEFGQSESPHSF*ISPYGS Trigger: AGAACCATATGGTGAAATGCAGAAACTGTGGGGGCT...CTCAGACTGGCCAAATTCTTTCAGACTGATCCTCTCCCGAATTAACCTGGTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR GCA 90 bp | TCCAGAGATCATGCTGAGGTGAGGCTAGTTGCAAAGAGAGGAAAGGGATGTGGTCTTGCTCATTTCATTTaGACCTTTCAGTCCAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: SRDHAEVRLVAKRGKGCGLAHFI*TFQSKS Trigger: AGACTTGGACTGAAAGGTGCAAATGAAATGAGCAAG...ACCACATCCCTTTCCTCTCTTTGCAACTAGCCTCACCTCAGCATGATCTCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR CCA 90 bp | AGAGGACAGGTGACCTTCAGAGTGCTTCTTAGAGGCATACCTCAGAGTCCAGAGCTGCATTTCACCATATaGTTCTCCTTTTTCAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: RGQVTFRVLLRGIPQSPELHFTI*FSFFSD Trigger: ATCACTGAAAAAGGAGAACCATATGGTGAAATGCAG...CTCTGGACTCTGAGGTATGCCTCTAAGAAGCACTCTGAAGGTCACCTGTCCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS-3UTR CCA 90 bp | TCCAGAGATCATGCTGAGGTGAGGCTAGTTGCAAAGAGAGGAAAGGGATGTGGTAAGAGATGTTTTGACTaGAGATGCACTCCTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRDHAEVRLVAKRGKGCGKRCFD*RCTPLS Trigger: AGAAAGAGGAGTGCATCTCCAGTCAAAACATCTCTT...ACCACATCCCTTTCCTCTCTTTGCAACTAGCCTCACCTCAGCATGATCTCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS GCA 90 bp | ACCTCTCCTTCCTCAGGGAAGGTAGGGCTCTCCGAAGGAGGTGTTTaGTTCTCAAGGGGAAGTGGTGGGGGCACTGACAGGAACCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TSPSSGKVGLSEGGV*FSRGSGGGTDRNLE Trigger: CTCCAGGTTCCTGTCAGTGCCCCCACCACTTCCCCTTGAGAAGCAAACACCTCCTTCGGAGAGCCCTACCTTCCCTGAGGAAGGAGAGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS TCA 90 bp | GATGCACTCCTCTTTCTGATCCCAGGGATGCTTGGCATCCGTGGCTaGGCCAAGTTGACCTGCTGGTCCCCCTTTTGCGGCTTCATTGGA | + |
|
Preference number: 5 (lower is better) Translates to: DALLFLIPGMLGIRG*AKLTCWSPFCGFIG Trigger: TCCAATGAAGCCGCAAAAGGGGGACCAGCAGGTCAACTTGGCTCAGCCACGGATGCCAAGCATCCCTGGGATCAGAAAGAGGAGTGCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS GCA 90 bp | TCCTTCCTGGCTCCCAGAGGCTGGGAGACTAGGAGCACATGGCCTTaGTTCATGGGGCACATTCTGCTTCTTACATTGTGGCCAAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SFLAPRGWETRSTWP*FMGHILLLTLWPKP Trigger: GGGCTTTGGCCACAATGTAAGAAGCAGAATGTGCCCCATGAAGCAAGGCCATGTGCTCCTAGTCTCCCAGCCTCTGGGAGCCAGGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS CCA 90 bp | TGGAGATGCACTCCTCTTTCTGATCCCAGGGATGCTTGGCATCCGTaGCTGAGCCAAGTTGACCTGCTGGTCCCCCTTTTGCGGCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: WRCTPLSDPRDAWHP*LSQVDLLVPLLRLH Trigger: ATGAAGCCGCAAAAGGGGGACCAGCAGGTCAACTTGGCTCAGCCACGGATGCCAAGCATCCCTGGGATCAGAAAGAGGAGTGCATCTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS GCA 90 bp | TCAGTCCAAGTCTGTTGGCAATGGGAGGAGACTGACTGTCCAGGGTaGCCTTGGAACCAGTCCTTGCATGGCTCTTCTCTGGTGCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: SVQVCWQWEETDCPG*PWNQSLHGSSLVHL Trigger: CAGATGCACCAGAGAAGAGCCATGCAAGGACTGGTTCCAAGGGCACCCTGGACAGTCAGTCTCCTCCCATTGCCAACAGACTTGGACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS-3UTR CAA 90 bp | CATGCTGAGGTGAGGCTAGTTGCAAAGAGAGGAAAGGGATGTGGTCCCAACCCACTCTCCCTGGGCTGTTaGAGCTGGAACAGCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HAEVRLVAKRGKGCGPNPLSLGC*SWNSWK Trigger: CTTCCAGCTGTTCCAGCTCAAACAGCCCAGGGAGAG...TGGGTTGGGACCACATCCCTTTCCTCTCTTTGCAACTAGCCTCACCTCAGCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS GCA 90 bp | GCAGTTACTACCGTGTCTGGTGAAGATCATTCTCAGGGCTTGGTCTaGAACACGGCCAGCGGATGCCCTGTGGAACTCTATACAGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: AVTTVSGEDHSQGLV*NTASGCPVELYTGS Trigger: AGACCCTGTATAGAGTTCCACAGGGCATCCGCTGGCCGTGTTGCAGACCAAGCCCTGAGAATGATCTTCACCAGACACGGTAGTAACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS CCA 90 bp | CTCCAGCAGTTACTACCGTGTCTGGTGAAGATCATTCTCAGGGCTTaGTCTGCAACACGGCCAGCGGATGCCCTGTGGAACTCTATACAG | + |
|
Preference number: 5 (lower is better) Translates to: LQQLLPCLVKIILRA*SATRPADALWNSIQ Trigger: CTGTATAGAGTTCCACAGGGCATCCGCTGGCCGTGTTGCAGACCAAGCCCTGAGAATGATCTTCACCAGACACGGTAGTAACTGCTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS-3UTR CAA 90 bp | CAAGAGTGGAGAGGACAGGTGACCTTCAGAGTGCTTCTTAGAGGCATACCTCAGTGCCTGAGCACTAGCTaGGCAACACCAGCAACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QEWRGQVTFRVLLRGIPQCLSTS*ATPATA Trigger: GGCTGTTGCTGGTGTTGCCAAGCTAGTGCTCAGGCA...CTGAGGTATGCCTCTAAGAAGCACTCTGAAGGTCACCTGTCCTCTCCACTCTTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGAGATCATGCTGAGGTGAGGCTAGTTGCAAAGAGAGGAAAGGGATGTGGTGATCATTCTCAGGGCTaGGTCTGCAACACGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRDHAEVRLVAKRGKGCGDHSQG*VCNTAS Trigger: GCTGGCCGTGTTGCAGACCAAGCCCTGAGAATGATC...ACCACATCCCTTTCCTCTCTTTGCAACTAGCCTCACCTCAGCATGATCTCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS TCA 90 bp | AAGGGAGCTTTCCTCTGCTGCTCATCAAACCTCTGTCTGGTGTCTTaGCTGAGTTTCTGTAGACCATGGGGCCTGCAAGGATCCCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: KGAFLCCSSNLCLVS*LSFCRPWGLQGSPF Trigger: GAATGGGGATCCTTGCAGGCCCCATGGTCTACAGAAACTCAGTCAAGACACCAGACAGAGGTTTGATGAGCAGCAGAGGAAAGCTCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS CCA 90 bp | TCTGGTGCATCTGTAGAGTTAAGTCTTTGTTTCTTCAGAGGATTCTaGCTAGGCTGTGTGGGGCACCAGGAAGCTTCCTTACCTGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGASVELSLCFFRGF*LGCVGHQEASLPGA Trigger: GGCCCCAGGTAAGGAAGCTTCCTGGTGCCCCACACAGCCTAGCCAGAATCCTCTGAAGAAACAAAGACTTAACTCTACAGATGCACCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS-3UTR CAA 90 bp | CATGCTGAGGTGAGGCTAGTTGCAAAGAGAGGAAAGGGATGTGGTCCCAACCCAATTCTGCTTCTTACATaGTGGCCAAAGCCCCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: HAEVRLVAKRGKGCGPNPILLLT*WPKPPQ Trigger: CTGTGGGGGCTTTGGCCACAATGTAAGAAGCAGAAT...TGGGTTGGGACCACATCCCTTTCCTCTCTTTGCAACTAGCCTCACCTCAGCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS-3UTR CAA 90 bp | CAAGAGTGGAGAGGACAGGTGACCTTCAGAGTGCTTCTTAGAGGCATACCTCAGGGAGCTGTCAAAGCATaGGAGGACAGGTTTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QEWRGQVTFRVLLRGIPQGAVKA*EDRFSR Trigger: CCTGGAAAACCTGTCCTCCAATGCTTTGACAGCTCC...CTGAGGTATGCCTCTAAGAAGCACTCTGAAGGTCACCTGTCCTCTCCACTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS-3UTR CAA 90 bp | CATGCTGAGGTGAGGCTAGTTGCAAAGAGAGGAAAGGGATGTGGTCCCAACCCACTGCTTGCATTACTTTaGGGGACAGCAACTGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: HAEVRLVAKRGKGCGPNPLLALL*GTATGC Trigger: ACACCCAGTTGCTGTCCCCAAAAGTAATGCAAGCAG...TGGGTTGGGACCACATCCCTTTCCTCTCTTTGCAACTAGCCTCACCTCAGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS-3UTR CAA 90 bp | TCTACCAGGTTAATTCGGGAGAGGATCAGTCTGAAAGAATTTGGCCAGTCTGAGCTGTCCAGGGTGCCCTaGGAACCAGTCCTTGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: STRLIRERISLKEFGQSELSRVP*EPVLAW Trigger: CCATGCAAGGACTGGTTCCAAGGGCACCCTGGACAG...CTCAGACTGGCCAAATTCTTTCAGACTGATCCTCTCCCGAATTAACCTGGTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS-3UTR CAA 90 bp | CAGGTGACCTTCAGAGTGCTTCTTAGAGGCATACCTCAGAGTCCAGAGATCATGCTCCGAAGGAGGTGTTaGCTTCTCAAGGGGAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QVTFRVLLRGIPQSPEIMLRRRC*LLKGKW Trigger: CCACTTCCCCTTGAGAAGCAAACACCTCCTTCGGAG...CATGATCTCTGGACTCTGAGGTATGCCTCTAAGAAGCACTCTGAAGGTCACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS TCA 90 bp | GAGCTTTCCTCTGCTGCTCATCAAACCTCTGTCTGGTGTCTTGACTaGGTTTCTGTAGACCATGGGGCCTGCAAGGATCCCCATTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ELSSAAHQTSVWCLD*VSVDHGACKDPHSL Trigger: AAGAGAATGGGGATCCTTGCAGGCCCCATGGTCTACAGAAACTCAGTCAAGACACCAGACAGAGGTTTGATGAGCAGCAGAGGAAAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS CCA 90 bp | TCTTGCTCATTTCATTTGCACCTTTCAGTCCAAGTCTGTTGGCAATaGGAGGAGACTGACTGTCCAGGGTGCCCTTGGAACCAGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SCSFHLHLSVQVCWQ*EETDCPGCPWNQSL Trigger: CAAGGACTGGTTCCAAGGGCACCCTGGACAGTCAGTCTCCTCCCATTGCCAACAGACTTGGACTGAAAGGTGCAAATGAAATGAGCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS GCA 90 bp | GTCCAGGGTGCCCTTGGAACCAGTCCTTGCATGGCTCTTCTCTGGTaGATCTGTAGAGTTAAGTCTTTGTTTCTTCAGAGGATTCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VQGALGTSPCMALLW*ICRVKSLFLQRILA Trigger: AGCCAGAATCCTCTGAAGAAACAAAGACTTAACTCTACAGATGCACCAGAGAAGAGCCATGCAAGGACTGGTTCCAAGGGCACCCTGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS GCA 90 bp | AATGGGAGGAGACTGACTGTCCAGGGTGCCCTTGGAACCAGTCCTTaGATGGCTCTTCTCTGGTGCATCTGTAGAGTTAAGTCTTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: NGRRLTVQGALGTSP*MALLWCICRVKSLF Trigger: AAACAAAGACTTAACTCTACAGATGCACCAGAGAAGAGCCATGCAAGGACTGGTTCCAAGGGCACCCTGGACAGTCAGTCTCCTCCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS CCA 90 bp | CAGGGTCTGGTTGCGAACAGAGCAGCCCTGCTATATAGCTGTTGTTaGTCAGTGCTGGGATCCTGGGCTGTTATTTTCTTGCTCATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QGLVANRAALLYSCC*SVLGSWAVIFLLIS Trigger: TGAAATGAGCAAGAAAATAACAGCCCAGGATCCCAGCACTGACCAACAACAGCTATATAGCAGGGCTGCTCTGTTCGCAACCAGACCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGACAGGTGACCTTCAGAGTGCTTCTTAGAGGCATACCTCAGAGTCCAGAGCCTTTTGCGGCTTCATaGGAAATTTCTGGAAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RGQVTFRVLLRGIPQSPEPFAAS*EISGRE Trigger: CTCCCTTCCAGAAATTTCCAATGAAGCCGCAAAAGG...CTCTGGACTCTGAGGTATGCCTCTAAGAAGCACTCTGAAGGTCACCTGTCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS-3UTR CAA 90 bp | TCAGAGTCCAGAGATCATGCTGAGGTGAGGCTAGTTGCAAAGAGAGGAAAGGGAGGAACAGTTCACTGCTaGCATTACTTTTGGGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: SESRDHAEVRLVAKRGKGGTVHC*HYFWGQ Trigger: CTGTCCCCAAAAGTAATGCAAGCAGTGAACTGTTCC...TCCCTTTCCTCTCTTTGCAACTAGCCTCACCTCAGCATGATCTCTGGACTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS CCA 90 bp | TTATTTTCTTGCTCATTTCATTTGCACCTTTCAGTCCAAGTCTGTTaGCAATGGGAGGAGACTGACTGTCCAGGGTGCCCTTGGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: LFSCSFHLHLSVQVC*QWEETDCPGCPWNQ Trigger: CTGGTTCCAAGGGCACCCTGGACAGTCAGTCTCCTCCCATTGCCAACAGACTTGGACTGAAAGGTGCAAATGAAATGAGCAAGAAAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGACAGGTGACCTTCAGAGTGCTTCTTAGAGGCATACCTCAGAGTCCAGAGTCTTGCTCATTTCATTaGCACCTTTCAGTCCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RGQVTFRVLLRGIPQSPESCSFH*HLSVQV Trigger: GACTTGGACTGAAAGGTGCAAATGAAATGAGCAAGA...CTCTGGACTCTGAGGTATGCCTCTAAGAAGCACTCTGAAGGTCACCTGTCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS CCA 90 bp | AGAGCAGCCCTGCTATATAGCTGTTGTTGGTCAGTGCTGGGATCCTaGGCTGTTATTTTCTTGCTCATTTCATTTGCACCTTTCAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RAALLYSCCWSVLGS*AVIFLLISFAPFSP Trigger: TGGACTGAAAGGTGCAAATGAAATGAGCAAGAAAATAACAGCCCAGGATCCCAGCACTGACCAACAACAGCTATATAGCAGGGCTGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS GCA 90 bp | GGCACATTCTGCTTCTTACATTGTGGCCAAAGCCCCCACAGTTTCTaGATTTCACCATATGGTTCTCCTTTTTCAGTGATGGAAGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GTFCFLHCGQSPHSF*ISPYGSPFSVMEVS Trigger: AGACACTTCCATCACTGAAAAAGGAGAACCATATGGTGAAATGCAGAAACTGTGGGGGCTTTGGCCACAATGTAAGAAGCAGAATGTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS-3UTR CAA 90 bp | TCTACCAGGTTAATTCGGGAGAGGATCAGTCTGAAAGAATTTGGCCAGTCTGAGTGTAGAGTTAAGTCTTaGTTTCTTCAGAGGATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: STRLIRERISLKEFGQSECRVKS*FLQRIL Trigger: CAGAATCCTCTGAAGAAACAAAGACTTAACTCTACA...CTCAGACTGGCCAAATTCTTTCAGACTGATCCTCTCCCGAATTAACCTGGTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS TCA 72 bp | CTCTTTCTGATCCCAGGGATGCTTGGCATCCGTGGCTaGGCCAAGTTGACCTGCTGGTCCCCCTTTTGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: LFLIPGMLGIRG*AKLTCWSPFCG Trigger: GCCGCAAAAGGGGGACCAGCAGGTCAACTTGGCTCAGCCACGGATGCCAAGCATCCCTGGGATCAGAAAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS GCA 72 bp | TCCTCAGGGAAGGTAGGGCTCTCCGAAGGAGGTGTTTaGTTCTCAAGGGGAAGTGGTGGGGGCACTGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSGKVGLSEGGV*FSRGSGGGTDR Trigger: CCTGTCAGTGCCCCCACCACTTCCCCTTGAGAAGCAAACACCTCCTTCGGAGAGCCCTACCTTCCCTGAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS TCA 72 bp | TCCCAGGGATGCTTGGCATCCGTGGCTGAGCCAAGTTaGCCTGCTGGTCCCCCTTTTGCGGCTTCATTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SQGCLASVAEPS*PAGPPFAASLE Trigger: TTCCAATGAAGCCGCAAAAGGGGGACCAGCAGGTCAACTTGGCTCAGCCACGGATGCCAAGCATCCCTGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS CCA 72 bp | AGGGCTTGGTCTGCAACACGGCCAGCGGATGCCCTGTaGAACTCTATACAGGGTCTGGTTGCGAACAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RAWSATRPADAL*NSIQGLVANRA Trigger: TGCTCTGTTCGCAACCAGACCCTGTATAGAGTTCCACAGGGCATCCGCTGGCCGTGTTGCAGACCAAGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS TCA 72 bp | AGGTGTTTGCTTCTCAAGGGGAAGTGGTGGGGGCACTaGCAGGAACCTGGAGCTCCAGCAGTTACTACCGTG | + |
|
Preference number: 6 (lower is better) Translates to: RCLLLKGKWWGH*QEPGAPAVTTV Trigger: CACGGTAGTAACTGCTGGAGCTCCAGGTTCCTGTCAGTGCCCCCACCACTTCCCCTTGAGAAGCAAACACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS GCA 72 bp | TGTCTATTCTGGTGGATGACAGGATGCTGGCTGGGCTaGGTTTTCCTACTGGGACCCTGGGCTTTCGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: CLFWWMTGCWLG*VFLLGPWAFGS Trigger: AGAGCCGAAAGCCCAGGGTCCCAGTAGGAAAACGCAGCCCAGCCAGCATCCTGTCATCCACCAGAATAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS GCA 72 bp | GTCTGTTGGCAATGGGAGGAGACTGACTGTCCAGGGTaGCCTTGGAACCAGTCCTTGCATGGCTCTTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VCWQWEETDCPG*PWNQSLHGSSL Trigger: CAGAGAAGAGCCATGCAAGGACTGGTTCCAAGGGCACCCTGGACAGTCAGTCTCCTCCCATTGCCAACAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS CCA 72 bp | ACTCCTCTTTCTGATCCCAGGGATGCTTGGCATCCGTaGCTGAGCCAAGTTGACCTGCTGGTCCCCCTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: TPLSDPRDAWHP*LSQVDLLVPLL Trigger: CAAAAGGGGGACCAGCAGGTCAACTTGGCTCAGCCACGGATGCCAAGCATCCCTGGGATCAGAAAGAGGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS CCA 72 bp | TGGAGATGCACTCCTCTTTCTGATCCCAGGGATGCTTaGCATCCGTGGCTGAGCCAAGTTGACCTGCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: WRCTPLSDPRDA*HPWLSQVDLLV Trigger: GACCAGCAGGTCAACTTGGCTCAGCCACGGATGCCAAGCATCCCTGGGATCAGAAAGAGGAGTGCATCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS CAA 90 bp | GCTTGGCATCCGTGGCTGAGCCAAGTTGACCTGCTGGTCCCCCTTTaGCGGCTTCATTGGAAATTTCTGGAAGGGAGCTTTCCTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AWHPWLSQVDLLVPL*RLHWKFLEGSFPLL Trigger: CAGCAGAGGAAAGCTCCCTTCCAGAAATTTCCAATGAAGCCGCAAAAGGGGGACCAGCAGGTCAACTTGGCTCAGCCACGGATGCCAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS TCA 72 bp | GTAGCTCTTCTGAGGCCGAGTTTCTTCCATCCTGCCTaGGCACTAGCTTGGCAACACCAGCAACAGCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: VALLRPSFFHPA*ALAWQHQQQPS Trigger: GGATGGCTGTTGCTGGTGTTGCCAAGCTAGTGCTCAGGCAGGATGGAAGAAACTCGGCCTCAGAAGAGCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS GCA 72 bp | GCTCCCAGAGGCTGGGAGACTAGGAGCACATGGCCTTaGTTCATGGGGCACATTCTGCTTCTTACATTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: APRGWETRSTWP*FMGHILLLTLW Trigger: CCACAATGTAAGAAGCAGAATGTGCCCCATGAAGCAAGGCCATGTGCTCCTAGTCTCCCAGCCTCTGGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS GCA 72 bp | ACCGTGTCTGGTGAAGATCATTCTCAGGGCTTGGTCTaGAACACGGCCAGCGGATGCCCTGTGGAACTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: TVSGEDHSQGLV*NTASGCPVELY Trigger: ATAGAGTTCCACAGGGCATCCGCTGGCCGTGTTGCAGACCAAGCCCTGAGAATGATCTTCACCAGACACGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS CCA 72 bp | TTACTACCGTGTCTGGTGAAGATCATTCTCAGGGCTTaGTCTGCAACACGGCCAGCGGATGCCCTGTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LLPCLVKIILRA*SATRPADALWN Trigger: GTTCCACAGGGCATCCGCTGGCCGTGTTGCAGACCAAGCCCTGAGAATGATCTTCACCAGACACGGTAGTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS CAA 90 bp | GCTCCAGCAGTTACTACCGTGTCTGGTGAAGATCATTCTCAGGGCTaGGTCTGCAACACGGCCAGCGGATGCCCTGTGGAACTCTATACA | + |
|
Preference number: 6 (lower is better) Translates to: APAVTTVSGEDHSQG*VCNTASGCPVELYT Trigger: TGTATAGAGTTCCACAGGGCATCCGCTGGCCGTGTTGCAGACCAAGCCCTGAGAATGATCTTCACCAGACACGGTAGTAACTGCTGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS TCA 72 bp | TGTTCCCATGAGCTTCTTGGCTCTCCCTGGGCTGTTTaGGCTGGAACAGCTGGAAGGCCCTTGATTTGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: CSHELLGSPWAV*AGTAGRPLICD Trigger: GTCACAAATCAAGGGCCTTCCAGCTGTTCCAGCTCAAACAGCCCAGGGAGAGCCAAGAAGCTCATGGGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS CCA 72 bp | GAGGCTGGGAGACTAGGAGCACATGGCCTTGCTTCATaGGGCACATTCTGCTTCTTACATTGTGGCCAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: EAGRLGAHGLAS*GTFCFLHCGQS Trigger: GCTTTGGCCACAATGTAAGAAGCAGAATGTGCCCCATGAAGCAAGGCCATGTGCTCCTAGTCTCCCAGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
||
| CDS CAA 72 bp | CCGTGGCTGAGCCAAGTTGACCTGCTGGTCCCCCTTTaGCGGCTTCATTGGAAATTTCTGGAAGGGAGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: PWLSQVDLLVPL*RLHWKFLEGSF Trigger: AAAGCTCCCTTCCAGAAATTTCCAATGAAGCCGCAAAAGGGGGACCAGCAGGTCAACTTGGCTCAGCCACGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS TCA 72 bp | CTGAAGGTCCTCATAGAGGATGCTCACTTTGACCTGTaGTCCTGCTACCTCTCCTTCCTCAGGGAAGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: LKVLIEDAHFDL*SCYLSFLREGR Trigger: CCTACCTTCCCTGAGGAAGGAGAGGTAGCAGGATCACAGGTCAAAGTGAGCATCCTCTATGAGGACCTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS GCA 72 bp | AGACTGACTGTCCAGGGTGCCCTTGGAACCAGTCCTTaGATGGCTCTTCTCTGGTGCATCTGTAGAGTTAAG | + |
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Preference number: 6 (lower is better) Translates to: RLTVQGALGTSP*MALLWCICRVK Trigger: CTTAACTCTACAGATGCACCAGAGAAGAGCCATGCAAGGACTGGTTCCAAGGGCACCCTGGACAGTCAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS CCA 72 bp | CAAGTTGACCTGCTGGTCCCCCTTTTGCGGCTTCATTaGAAATTTCTGGAAGGGAGCTTTCCTCTGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: QVDLLVPLLRLH*KFLEGSFPLLL Trigger: GAGCAGCAGAGGAAAGCTCCCTTCCAGAAATTTCCAATGAAGCCGCAAAAGGGGGACCAGCAGGTCAACTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS CAA 90 bp | TGGAGGACAGGTTTTCCAGGGCACATCTGCTTCCCAAGAGATGTTTaGACTGGAGATGCACTCCTCTTTCTGATCCCAGGGATGCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: WRTGFPGHICFPRDV*TGDALLFLIPGMLG Trigger: GCCAAGCATCCCTGGGATCAGAAAGAGGAGTGCATCTCCAGTCAAAACATCTCTTGGGAAGCAGATGTGCCCTGGAAAACCTGTCCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS CAA 90 bp | TACTGGGACCCTGGGCTTTCGGCTCTTTGTGGAACAGTTCACTGCTaGCATTACTTTTGGGGACAGCAACTGGGTGTTGACATGAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: YWDPGLSALCGTVHC*HYFWGQQLGVDMRY Trigger: GTACCTCATGTCAACACCCAGTTGCTGTCCCCAAAAGTAATGCAAGCAGTGAACTGTTCCACAAAGAGCCGAAAGCCCAGGGTCCCAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS TCA 72 bp | TTCCTCTGCTGCTCATCAAACCTCTGTCTGGTGTCTTaGCTGAGTTTCTGTAGACCATGGGGCCTGCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: FLCCSSNLCLVS*LSFCRPWGLQG Trigger: TCCTTGCAGGCCCCATGGTCTACAGAAACTCAGTCAAGACACCAGACAGAGGTTTGATGAGCAGCAGAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS GCA 72 bp | ACTCTATACAGGGTCTGGTTGCGAACAGAGCAGCCCTaGTATATAGCTGTTGTTGGTCAGTGCTGGGATCCT | + |
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Preference number: 6 (lower is better) Translates to: TLYRVWLRTEQP*YIAVVGQCWDP Trigger: AGGATCCCAGCACTGACCAACAACAGCTATATAGCAGGGCTGCTCTGTTCGCAACCAGACCCTGTATAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS CCA 72 bp | TGCTGGTCCCCCTTTTGCGGCTTCATTGGAAATTTCTaGAAGGGAGCTTTCCTCTGCTGCTCATCAAACCTC | + |
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Preference number: 6 (lower is better) Translates to: CWSPFCGFIGNF*KGAFLCCSSNL Trigger: GAGGTTTGATGAGCAGCAGAGGAAAGCTCCCTTCCAGAAATTTCCAATGAAGCCGCAAAAGGGGGACCAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS CCA 72 bp | TCCAGGGCACATCTGCTTCCCAAGAGATGTTTTGACTaGAGATGCACTCCTCTTTCTGATCCCAGGGATGCT | + |
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Preference number: 6 (lower is better) Translates to: SRAHLLPKRCFD*RCTPLSDPRDA Trigger: AGCATCCCTGGGATCAGAAAGAGGAGTGCATCTCCAGTCAAAACATCTCTTGGGAAGCAGATGTGCCCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS CCA 72 bp | TGCTCATTTCATTTGCACCTTTCAGTCCAAGTCTGTTaGCAATGGGAGGAGACTGACTGTCCAGGGTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: CSFHLHLSVQVC*QWEETDCPGCP Trigger: AGGGCACCCTGGACAGTCAGTCTCCTCCCATTGCCAACAGACTTGGACTGAAAGGTGCAAATGAAATGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS GCA 72 bp | CTGGGCTTTCGGCTCTTTGTGGAACAGTTCACTGCTTaGATTACTTTTGGGGACAGCAACTGGGTGTTGACA | + |
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Preference number: 6 (lower is better) Translates to: LGFRLFVEQFTA*ITFGDSNWVLT Trigger: TGTCAACACCCAGTTGCTGTCCCCAAAAGTAATGCAAGCAGTGAACTGTTCCACAAAGAGCCGAAAGCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS CCA 72 bp | GTTGCGAACAGAGCAGCCCTGCTATATAGCTGTTGTTaGTCAGTGCTGGGATCCTGGGCTGTTATTTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: VANRAALLYSCC*SVLGSWAVIFL Trigger: CAAGAAAATAACAGCCCAGGATCCCAGCACTGACCAACAACAGCTATATAGCAGGGCTGCTCTGTTCGCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS GCA 72 bp | TCAAAGCATTGGAGGACAGGTTTTCCAGGGCACATCTaGTTCCCAAGAGATGTTTTGACTGGAGATGCACTC | + |
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Preference number: 6 (lower is better) Translates to: SKHWRTGFPGHI*FPRDVLTGDAL Trigger: GAGTGCATCTCCAGTCAAAACATCTCTTGGGAAGCAGATGTGCCCTGGAAAACCTGTCCTCCAATGCTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS GCA 72 bp | GCCCTTGGAACCAGTCCTTGCATGGCTCTTCTCTGGTaGATCTGTAGAGTTAAGTCTTTGTTTCTTCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: ALGTSPCMALLW*ICRVKSLFLQR Trigger: CCTCTGAAGAAACAAAGACTTAACTCTACAGATGCACCAGAGAAGAGCCATGCAAGGACTGGTTCCAAGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS CCA 72 bp | TCTGTAGAGTTAAGTCTTTGTTTCTTCAGAGGATTCTaGCTAGGCTGTGTGGGGCACCAGGAAGCTTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: SVELSLCFFRGF*LGCVGHQEASL Trigger: TAAGGAAGCTTCCTGGTGCCCCACACAGCCTAGCCAGAATCCTCTGAAGAAACAAAGACTTAACTCTACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS CAA 90 bp | TATAGCTGTTGTTGGTCAGTGCTGGGATCCTGGGCTGTTATTTTCTaGCTCATTTCATTTGCACCTTTCAGTCCAAGTCTGTTGGCAATG | + |
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Preference number: 6 (lower is better) Translates to: YSCCWSVLGSWAVIF*LISFAPFSPSLLAM Trigger: CATTGCCAACAGACTTGGACTGAAAGGTGCAAATGAAATGAGCAAGAAAATAACAGCCCAGGATCCCAGCACTGACCAACAACAGCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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| CDS CCA 72 bp | CTGCTATATAGCTGTTGTTGGTCAGTGCTGGGATCCTaGGCTGTTATTTTCTTGCTCATTTCATTTGCACCT | + |
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Preference number: 6 (lower is better) Translates to: LLYSCCWSVLGS*AVIFLLISFAP Trigger: AGGTGCAAATGAAATGAGCAAGAAAATAACAGCCCAGGATCCCAGCACTGACCAACAACAGCTATATAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110741.2 |
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