Pregenerated sensors for FAM83F (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022408Ensembl transcript IDs: ENSMUST00000023044.7
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTGGGGCTGCTTTGGACATTCTGTCCTACCAAGGCAGAAAGAATaGCCCTTGTCCCACCCGAGGACCTGTAAGGAGGGCTGGCCCAGT | + |
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Preference number: 1 (lower is better) Translates to: GWGCFGHSVLPRQKE*PLSHPRTCKEGWPS Trigger: ACTGGGCCAGCCCTCCTTACAGGTCCTCGGGTGGGACAAGGGCCATTCTTTCTGCCTTGGTAGGACAGAATGTCCAAAGCAGCCCCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR GCA 90 bp | CTCACTCTCCCTCAGCCTGGACAGGTCACTGTAAGGGGAGGTGGCTaGTTGTCCTGGAACTTAAGCCAACCTGACTTAGAGAAACGGAGG | + |
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Preference number: 1 (lower is better) Translates to: LTLPQPGQVTVRGGG*LSWNLSQPDLEKRR Trigger: CCTCCGTTTCTCTAAGTCAGGTTGGCTTAAGTTCCAGGACAAGCAGCCACCTCCCCTTACAGTGACCTGTCCAGGCTGAGGGAGAGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR CCA 90 bp | CAGCACCAGATGTCCAAGAAGAAGGCAAAGTGGCTGGGGCTGCTTTaGACATTCTGTCCTACCAAGGCAGAAAGAATGGCCCTTGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: QHQMSKKKAKWLGLL*TFCPTKAERMALVP Trigger: TGGGACAAGGGCCATTCTTTCTGCCTTGGTAGGACAGAATGTCCAAAGCAGCCCCAGCCACTTTGCCTTCTTCTTGGACATCTGGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR CCA 90 bp | GAAAGAGAGAAGATCTTGGCTTGGAGGCCTAGAAGGGCTTCATTGTaGCCTTCTGCCCCTCTGTCATTCTGCCTGTTCAGGAGGGTTGAC | + |
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Preference number: 1 (lower is better) Translates to: EREKILAWRPRRASL*PSAPLSFCLFRRVD Trigger: GTCAACCCTCCTGAACAGGCAGAATGACAGAGGGGCAGAAGGCCACAATGAAGCCCTTCTAGGCCTCCAAGCCAAGATCTTCTCTCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR GCA 90 bp | CTAGACAGCACCAGATGTCCAAGAAGAAGGCAAAGTGGCTGGGGCTaGTTTGGACATTCTGTCCTACCAAGGCAGAAAGAATGGCCCTTG | + |
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Preference number: 1 (lower is better) Translates to: LDSTRCPRRRQSGWG*FGHSVLPRQKEWPL Trigger: CAAGGGCCATTCTTTCTGCCTTGGTAGGACAGAATGTCCAAAGCAGCCCCAGCCACTTTGCCTTCTTCTTGGACATCTGGTGCTGTCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR CCA 90 bp | GAGATTCAGACTCTGCTGTTTGGAATTCCAGCACTAAGACTGGAATaGAGGCTACAGGGTAGGAGGCCTGCTGAGGGTCTGATGTGTGAC | + |
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Preference number: 1 (lower is better) Translates to: EIQTLLFGIPALRLE*RLQGRRPAEGLMCD Trigger: GTCACACATCAGACCCTCAGCAGGCCTCCTACCCTGTAGCCTCCATTCCAGTCTTAGTGCTGGAATTCCAAACAGCAGAGTCTGAATCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR CCA 90 bp | CAATATTCCAGCCATTCCAGCTGCATAGTCCACCTGGAGCAAGACTaGCTCAGAGTCCCACCTTCTTCCATTTTTCCCACCAACCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: QYSSHSSCIVHLEQD*LRVPPSSIFPTNLW Trigger: CCAGAGGTTGGTGGGAAAAATGGAAGAAGGTGGGACTCTGAGCCAGTCTTGCTCCAGGTGGACTATGCAGCTGGAATGGCTGGAATATTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR CCA 90 bp | GGAGAACTAGACAGCACCAGATGTCCAAGAAGAAGGCAAAGTGGCTaGGGCTGCTTTGGACATTCTGTCCTACCAAGGCAGAAAGAATGG | + |
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Preference number: 1 (lower is better) Translates to: GELDSTRCPRRRQSG*GCFGHSVLPRQKEW Trigger: CCATTCTTTCTGCCTTGGTAGGACAGAATGTCCAAAGCAGCCCCAGCCACTTTGCCTTCTTCTTGGACATCTGGTGCTGTCTAGTTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR CCA 90 bp | TCAGAGTCCCACCTTCTTCCATTTTTCCCACCAACCTCTGGGATATaGAGAACTAGACAGCACCAGATGTCCAAGAAGAAGGCAAAGTGG | + |
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Preference number: 1 (lower is better) Translates to: SESHLLPFFPPTSGI*RTRQHQMSKKKAKW Trigger: CCACTTTGCCTTCTTCTTGGACATCTGGTGCTGTCTAGTTCTCCATATCCCAGAGGTTGGTGGGAAAAATGGAAGAAGGTGGGACTCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR CAA 90 bp | TCCCCACCAGCAGGGAGGCCAGATACAGGAACAGGCCGCCACGTGTaGCCCACTGTAGTCCACAATGCCTCCTCCCTGCCTCTCACCGGC | + |
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Preference number: 2 (lower is better) Translates to: SPPAGRPDTGTGRHV*PTVVHNASSLPLTG Trigger: GCCGGTGAGAGGCAGGGAGGAGGCATTGTGGACTACAGTGGGCAACACGTGGCGGCCTGTTCCTGTATCTGGCCTCCCTGCTGGTGGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR CAA 90 bp | CCCACCCGAGGACCTGTAAGGAGGGCTGGCCCAGTGGAGGACAGGTaGGCAACAAGGAAAGCAGACACTAGGCAGGCGTCTACTTCATGT | + |
|
Preference number: 2 (lower is better) Translates to: PTRGPVRRAGPVEDR*ATRKADTRQASTSC Trigger: ACATGAAGTAGACGCCTGCCTAGTGTCTGCTTTCCTTGTTGCCAACCTGTCCTCCACTGGGCCAGCCCTCCTTACAGGTCCTCGGGTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR CAA 90 bp | GGCTGCTTTGGACATTCTGTCCTACCAAGGCAGAAAGAATGGCCCTaGTCCCACCCGAGGACCTGTAAGGAGGGCTGGCCCAGTGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: GCFGHSVLPRQKEWP*SHPRTCKEGWPSGG Trigger: TCCTCCACTGGGCCAGCCCTCCTTACAGGTCCTCGGGTGGGACAAGGGCCATTCTTTCTGCCTTGGTAGGACAGAATGTCCAAAGCAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR-3UTR CCA 90 bp | TCTCCCTCAGCCTGGACAGGTCACTGTAAGGGGAGGTGGCTGCTTGTCCTGGAACCAAGGCAGAAAGAATaGCCCTTGTCCCACCCGAGG | + |
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Preference number: 2 (lower is better) Translates to: SPSAWTGHCKGRWLLVLEPRQKE*PLSHPR Trigger: CCTCGGGTGGGACAAGGGCCATTCTTTCTGCCTTGG...TTCCAGGACAAGCAGCCACCTCCCCTTACAGTGACCTGTCCAGGCTGAGGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR-3UTR CCA 90 bp | CCTGCCTCTCACCGGCTGCCTCTGCAGATGCCCCTGTCCCTCCCTGGTACTAGTGAGAAGATCTTGGCTTaGAGGCCTAGAAGGGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: PASHRLPLQMPLSLPGTSEKILA*RPRRAS Trigger: TGAAGCCCTTCTAGGCCTCCAAGCCAAGATCTTCTC...ACTAGTACCAGGGAGGGACAGGGGCATCTGCAGAGGCAGCCGGTGAGAGGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR-3UTR GCA 90 bp | GGCTGCTTTGGACATTCTGTCCTACCAAGGCAGAAAGAATGGCCCTTGTCCCACGGCATCTGCAGGTCCTaGCCACCAATGCACTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: GCFGHSVLPRQKEWPLSHGICRS*PPMHCS Trigger: GCTGCAGTGCATTGGTGGGCAGGACCTGCAGATGCC...GTGGGACAAGGGCCATTCTTTCTGCCTTGGTAGGACAGAATGTCCAAAGCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR-3UTR CCA 90 bp | GGAGAACTAGACAGCACCAGATGTCCAAGAAGAAGGCAAAGTGGCTGGGGCTGCACCTGTAAGGAGGGCTaGCCCAGTGGAGGACAGGTT | + |
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Preference number: 2 (lower is better) Translates to: GELDSTRCPRRRQSGWGCTCKEG*PSGGQV Trigger: AACCTGTCCTCCACTGGGCCAGCCCTCCTTACAGGT...GCAGCCCCAGCCACTTTGCCTTCTTCTTGGACATCTGGTGCTGTCTAGTTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR-3UTR GCA 90 bp | CTCTGTCATTCTGCCTGTTCAGGAGGGTTGACCAGAGTCTACAGTCGGAGATGTAGCACTGTCAGATCCTaGCACAGGCTGGAGGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: LCHSACSGGLTRVYSRRCSTVRS*HRLEGG Trigger: GCCTCCCTCCAGCCTGTGGCAGGATCTGACAGTGCT...ACATCTCCGACTGTAGACTCTGGTCAACCCTCCTGAACAGGCAGAATGACAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR-3UTR CCA 90 bp | TCCAGCCATTCCAGCTGCATAGTCCACCTGGAGCAAGACTGGCTCAGAGTCCCATGGCTGGGGCTGCTTTaGACATTCTGTCCTACCAAG | + |
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Preference number: 2 (lower is better) Translates to: SSHSSCIVHLEQDWLRVPWLGLL*TFCPTK Trigger: CTTGGTAGGACAGAATGTCCAAAGCAGCCCCAGCCA...TGGGACTCTGAGCCAGTCTTGCTCCAGGTGGACTATGCAGCTGGAATGGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR-3UTR TCA 90 bp | TCTCCCTCAGCCTGGACAGGTCACTGTAAGGGGAGGTGGCTGCTTGTCCTGGAATGGCTAGTCTTTGGCTaGAGTTTCATGAAGGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: SPSAWTGHCKGRWLLVLEWLVFG*SFMKEA Trigger: GGCTTCCTTCATGAAACTTCAGCCAAAGACTAGCCA...TTCCAGGACAAGCAGCCACCTCCCCTTACAGTGACCTGTCCAGGCTGAGGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR-3UTR CCA 90 bp | GATGTCTATGTCACACTCACTCTCCCTCAGCCTGGACAGGTCACTGTAAGGGGAGATCCTGCCACAGGCTaGAGGGAGGCAGAAGTATTC | + |
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Preference number: 2 (lower is better) Translates to: DVYVTLTLPQPGQVTVRGDPATG*REAEVF Trigger: GAATACTTCTGCCTCCCTCCAGCCTGTGGCAGGATC...TCCCCTTACAGTGACCTGTCCAGGCTGAGGGAGAGTGAGTGTGACATAGACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR CAA 90 bp | ACAGCACCAGATGTCCAAGAAGAAGGCAAAGTGGCTGGGGCTGCTTaGGACATTCTGTCCTACCAAGGCAGAAAGAATGGCCCTTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: TAPDVQEEGKVAGAA*DILSYQGRKNGPCP Trigger: GGGACAAGGGCCATTCTTTCTGCCTTGGTAGGACAGAATGTCCAAAGCAGCCCCAGCCACTTTGCCTTCTTCTTGGACATCTGGTGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR-3UTR TCA 90 bp | CAAGCTCTAGCTTTCAACAGCACCATCCAGGGAATCCCAGGGCACTCAGGCAGGCGACGGTTTAGATGCTaGGAAGAGATTCAGACTCTG | + |
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Preference number: 2 (lower is better) Translates to: QALAFNSTIQGIPGHSGRRRFRC*EEIQTL Trigger: CAGAGTCTGAATCTCTTCTCAGCATCTAAACCGTCG...CCTGCCTGAGTGCCCTGGGATTCCCTGGATGGTGCTGTTGAAAGCTAGAGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR-3UTR CCA 90 bp | TTCCAGCTGCATAGTCCACCTGGAGCAAGACTGGCTCAGAGTCCCACCTTCTTCTCAGACTCTGCTGTTTaGAATTCCAGCACTAAGACT | + |
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Preference number: 2 (lower is better) Translates to: FQLHSPPGARLAQSPTFFSDSAV*NSSTKT Trigger: AGTCTTAGTGCTGGAATTCCAAACAGCAGAGTCTGA...GAAGAAGGTGGGACTCTGAGCCAGTCTTGCTCCAGGTGGACTATGCAGCTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR-3UTR GCA 90 bp | CTAGACAGCACCAGATGTCCAAGAAGAAGGCAAAGTGGCTGGGGCTGCTTTGGAAAGAGATTCAGACTCTaGTGTTTGGAATTCCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: LDSTRCPRRRQSGWGCFGKRFRL*CLEFQH Trigger: GTGCTGGAATTCCAAACAGCAGAGTCTGAATCTCTT...TCCAAAGCAGCCCCAGCCACTTTGCCTTCTTCTTGGACATCTGGTGCTGTCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR TCA 72 bp | GGGGTGGGCTGGGAGGAACCACAAATGTTCATGTCCTaGGGGCCCATCCTCCTCCCACCCTCCACAGGGTCT | + |
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Preference number: 3 (lower is better) Translates to: GVGWEEPQMFMS*GPILLPPSTGS Trigger: AGACCCTGTGGAGGGTGGGAGGAGGATGGGCCCTCAGGACATGAACATTTGTGGTTCCTCCCAGCCCACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR CCA 72 bp | TGGCCCTTGTCCCACCCGAGGACCTGTAAGGAGGGCTaGCCCAGTGGAGGACAGGTTGGCAACAAGGAAAGC | + |
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Preference number: 3 (lower is better) Translates to: WPLSHPRTCKEG*PSGGQVGNKES Trigger: GCTTTCCTTGTTGCCAACCTGTCCTCCACTGGGCCAGCCCTCCTTACAGGTCCTCGGGTGGGACAAGGGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR CCA 72 bp | GGCCATGTTCTTCTCCTCAGCATAGGACCGGATGGGTaGGCATCTGCAGGTCCTGCCCACCAATGCACTGCA | + |
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Preference number: 3 (lower is better) Translates to: GHVLLLSIGPDG*ASAGPAHQCTA Trigger: TGCAGTGCATTGGTGGGCAGGACCTGCAGATGCCCACCCATCCGGTCCTATGCTGAGGAGAAGAACATGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR CCA 72 bp | AAGAGGCCATGTTCTTCTCCTCAGCATAGGACCGGATaGGTGGGCATCTGCAGGTCCTGCCCACCAATGCAC | + |
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Preference number: 3 (lower is better) Translates to: KRPCSSPQHRTG*VGICRSCPPMH Trigger: GTGCATTGGTGGGCAGGACCTGCAGATGCCCACCCATCCGGTCCTATGCTGAGGAGAAGAACATGGCCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR-3UTR CAA 90 bp | GGCTGGGGCTGCTTTGGACATTCTGTCCTACCAAGGCAGAAAGAATGGCCCTTGCCAGTGGAGGACAGGTaGGCAACAAGGAAAGCAGAC | + |
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Preference number: 3 (lower is better) Translates to: GWGCFGHSVLPRQKEWPLPVEDR*ATRKAD Trigger: GTCTGCTTTCCTTGTTGCCAACCTGTCCTCCACTGG...CAAGGGCCATTCTTTCTGCCTTGGTAGGACAGAATGTCCAAAGCAGCCCCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR GCA 72 bp | CCTCAGCCTGGACAGGTCACTGTAAGGGGAGGTGGCTaGTTGTCCTGGAACTTAAGCCAACCTGACTTAGAG | + |
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Preference number: 3 (lower is better) Translates to: PQPGQVTVRGGG*LSWNLSQPDLE Trigger: CTCTAAGTCAGGTTGGCTTAAGTTCCAGGACAAGCAGCCACCTCCCCTTACAGTGACCTGTCCAGGCTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR CCA 72 bp | TGCTTTGGACATTCTGTCCTACCAAGGCAGAAAGAATaGCCCTTGTCCCACCCGAGGACCTGTAAGGAGGGC | + |
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Preference number: 3 (lower is better) Translates to: CFGHSVLPRQKE*PLSHPRTCKEG Trigger: GCCCTCCTTACAGGTCCTCGGGTGGGACAAGGGCCATTCTTTCTGCCTTGGTAGGACAGAATGTCCAAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR CCA 72 bp | GGTTCTTTGCCAGCACTGTCAGATCCTGCCACAGGCTaGAGGGAGGCAGAAGTATTCCTATCCCCACCACAA | + |
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Preference number: 3 (lower is better) Translates to: GSLPALSDPATG*REAEVFLSPPQ Trigger: TTGTGGTGGGGATAGGAATACTTCTGCCTCCCTCCAGCCTGTGGCAGGATCTGACAGTGCTGGCAAAGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR CCA 72 bp | ACTCTGCTGTTTGGAATTCCAGCACTAAGACTGGAATaGAGGCTACAGGGTAGGAGGCCTGCTGAGGGTCTG | + |
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Preference number: 3 (lower is better) Translates to: TLLFGIPALRLE*RLQGRRPAEGL Trigger: CAGACCCTCAGCAGGCCTCCTACCCTGTAGCCTCCATTCCAGTCTTAGTGCTGGAATTCCAAACAGCAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR TCA 72 bp | CCGCGGTCTGCTGCAGCCATGCGACGGTTTAGATGCTaGGAAGAGATTCAGACTCTGCTGTTTGGAATTCCA | + |
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Preference number: 3 (lower is better) Translates to: PRSAAAMRRFRC*EEIQTLLFGIP Trigger: TGGAATTCCAAACAGCAGAGTCTGAATCTCTTCTCAGCATCTAAACCGTCGCATGGCTGCAGCAGACCGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR TCA 72 bp | GGGAGGTGGCTGCTTGTCCTGGAACTTAAGCCAACCTaGCTTAGAGAAACGGAGGCTTCTGAGAACAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: GRWLLVLELKPT*LRETEASENSL Trigger: CAAGCTGTTCTCAGAAGCCTCCGTTTCTCTAAGTCAGGTTGGCTTAAGTTCCAGGACAAGCAGCCACCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR CCA 72 bp | AGCACTTACCAGAAGTGTTTAATCCTCACAAAGGCTTaGGAAGCCACGGTGGGGCTAACCTTGGGGTGGACA | + |
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Preference number: 3 (lower is better) Translates to: STYQKCLILTKA*EATVGLTLGWT Trigger: TGTCCACCCCAAGGTTAGCCCCACCGTGGCTTCCCAAGCCTTTGTGAGGATTAAACACTTCTGGTAAGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR CCA 72 bp | ATGTCCAAGAAGAAGGCAAAGTGGCTGGGGCTGCTTTaGACATTCTGTCCTACCAAGGCAGAAAGAATGGCC | + |
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Preference number: 3 (lower is better) Translates to: MSKKKAKWLGLL*TFCPTKAERMA Trigger: GGCCATTCTTTCTGCCTTGGTAGGACAGAATGTCCAAAGCAGCCCCAGCCACTTTGCCTTCTTCTTGGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR CCA 72 bp | ACTAGACAGCACCAGATGTCCAAGAAGAAGGCAAAGTaGCTGGGGCTGCTTTGGACATTCTGTCCTACCAAG | + |
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Preference number: 3 (lower is better) Translates to: TRQHQMSKKKAK*LGLLWTFCPTK Trigger: CTTGGTAGGACAGAATGTCCAAAGCAGCCCCAGCCACTTTGCCTTCTTCTTGGACATCTGGTGCTGTCTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR GCA 72 bp | ACCAGATGTCCAAGAAGAAGGCAAAGTGGCTGGGGCTaGTTTGGACATTCTGTCCTACCAAGGCAGAAAGAA | + |
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Preference number: 3 (lower is better) Translates to: TRCPRRRQSGWG*FGHSVLPRQKE Trigger: TTCTTTCTGCCTTGGTAGGACAGAATGTCCAAAGCAGCCCCAGCCACTTTGCCTTCTTCTTGGACATCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR CCA 72 bp | GGTCTTTTCAGAAAGGAAAGAGAGAAGATCTTGGCTTaGAGGCCTAGAAGGGCTTCATTGTGGCCTTCTGCC | + |
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Preference number: 3 (lower is better) Translates to: GLFRKEREKILA*RPRRASLWPSA Trigger: GGCAGAAGGCCACAATGAAGCCCTTCTAGGCCTCCAAGCCAAGATCTTCTCTCTTTCCTTTCTGAAAAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR GCA 72 bp | GAAGACCATAATAGACAATATTCCAGCCATTCCAGCTaGATAGTCCACCTGGAGCAAGACTGGCTCAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: EDHNRQYSSHSS*IVHLEQDWLRV Trigger: GACTCTGAGCCAGTCTTGCTCCAGGTGGACTATGCAGCTGGAATGGCTGGAATATTGTCTATTATGGTCTTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| CDS-3UTR CCA 90 bp | CCTGCCTCTCACCGGCTGCCTCTGCAGATGCCCCTGTCCCTCCCTGGTACTAGTCCTGGCGCTCCTGGCTaGAGAGGAAGTCCCGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: PASHRLPLQMPLSLPGTSPGAPG*RGSPAA Trigger: GGCTGCGGGACTTCCTCTCCAGCCAGGAGCGCCAGG...ACTAGTACCAGGGAGGGACAGGGGCATCTGCAGAGGCAGCCGGTGAGAGGCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| CDS-3UTR CCA 90 bp | CCTGCCTCTCACCGGCTGCCTCTGCAGATGCCCCTGTCCCTCCCTGGTACTAGTAGGGACTCAGTGGGCTaGGCCGGGACCTTGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: PASHRLPLQMPLSLPGTSRDSVG*AGTLAL Trigger: CAAGGCCAAGGTCCCGGCCCAGCCCACTGAGTCCCT...ACTAGTACCAGGGAGGGACAGGGGCATCTGCAGAGGCAGCCGGTGAGAGGCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| CDS-3UTR CCA 90 bp | GGAGGGCTGGCCCAGTGGAGGACAGGTTGGCAACAAGGAAAGCAGACACTAGGCAGGGCCTGGCGCTCCTaGCTGGAGAGGAAGTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: GGLAQWRTGWQQGKQTLGRAWRS*LERKSR Trigger: GCGGGACTTCCTCTCCAGCCAGGAGCGCCAGGCCCT...GCCTAGTGTCTGCTTTCCTTGTTGCCAACCTGTCCTCCACTGGGCCAGCCCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| 3UTR CAA 72 bp | GCAGGGAGGCCAGATACAGGAACAGGCCGCCACGTGTaGCCCACTGTAGTCCACAATGCCTCCTCCCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: AGRPDTGTGRHV*PTVVHNASSLP Trigger: AGGCAGGGAGGAGGCATTGTGGACTACAGTGGGCAACACGTGGCGGCCTGTTCCTGTATCTGGCCTCCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| CDS-3UTR GCA 90 bp | GGCCATGTTCTTCTCCTCAGCATAGGACCGGATGGGTGGGCATCTGCAGGTCCTACTCACCACCGCCACTaGCCTCCTCCTGCCCCTCTA | + |
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Preference number: 4 (lower is better) Translates to: GHVLLLSIGPDGWASAGPTHHRH*PPPAPL Trigger: TAGAGGGGCAGGAGGAGGGCAGTGGCGGTGGTGAGT...AGGACCTGCAGATGCCCACCCATCCGGTCCTATGCTGAGGAGAAGAACATGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| CDS-3UTR TCA 90 bp | CAAGCTCTAGCTTTCAACAGCACCATCCAGGGAATCCCAGGGCACTCAGGCAGGGCAGCCGCTCCTTCTTaGCCAGTTCGCGGTAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: QALAFNSTIQGIPGHSGRAAAPS*PVRGRP Trigger: AGGCCTACCGCGAACTGGTCAAGAAGGAGCGGCTGC...CCTGCCTGAGTGCCCTGGGATTCCCTGGATGGTGCTGTTGAAAGCTAGAGCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| CDS-3UTR GCA 90 bp | TCCAGCCATTCCAGCTGCATAGTCCACCTGGAGCAAGACTGGCTCAGAGTCCCAACCCTCTCGTTCACGTaGGCCTCGTCCAGGCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: SSHSSCIVHLEQDWLRVPTLSFT*ASSRQL Trigger: GAGCTGCCTGGACGAGGCGCACGTGAACGAGAGGGT...TGGGACTCTGAGCCAGTCTTGCTCCAGGTGGACTATGCAGCTGGAATGGCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| CDS-3UTR GCA 90 bp | AGAAGATCTTGGCTTGGAGGCCTAGAAGGGCTTCATTGTGGCCTTCTGCCCCTCGAGGCCAATCCTGCCTaGCAGGCCCAGGTGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RRSWLGGLEGLHCGLLPLEANPA*QAQVLV Trigger: CACCAGCACCTGGGCCTGGCAGGCAGGATTGGCCTC...GAGGGGCAGAAGGCCACAATGAAGCCCTTCTAGGCCTCCAAGCCAAGATCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR GCA 90 bp | AGGCCATGTTCTTCTCCTCAGCATAGGACCGGATGGGTGGGCATCTGCAGGTCCGCCATTCTGGGGCAGTaGCTCTCGGGACCTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RPCSSPQHRTGWVGICRSAILGQ*LSGPVL Trigger: AAGCACAGGTCCCGAGAGGCACTGCCCCAGAATGGC...GGACCTGCAGATGCCCACCCATCCGGTCCTATGCTGAGGAGAAGAACATGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR CCA 90 bp | GTTCTTCTCCTCAGCATAGGACCGGATGGGTGGGCATCTGCAGGTCCTGCCCACCACCGCGGTAGAAGTTaGTGTCTGTCCACCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VLLLSIGPDGWASAGPAHHRGRS*CLSTPG Trigger: ACCTGGGGTGGACAGACACCAACTTCTACCGCGGTG...GTGGGCAGGACCTGCAGATGCCCACCCATCCGGTCCTATGCTGAGGAGAAGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR CCA 90 bp | TTCCAGCTGCATAGTCCACCTGGAGCAAGACTGGCTCAGAGTCCCACCTTCTTCCAGTGGAGGGGGAGCTaGCCATGCTGCTGGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: FQLHSPPGARLAQSPTFFQWRGS*PCCWAL Trigger: CAGTGCCCAGCAGCATGGCCAGCTCCCCCTCCACTG...GAAGAAGGTGGGACTCTGAGCCAGTCTTGCTCCAGGTGGACTATGCAGCTGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| 3UTR CAA 72 bp | GGACCTGTAAGGAGGGCTGGCCCAGTGGAGGACAGGTaGGCAACAAGGAAAGCAGACACTAGGCAGGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GPVRRAGPVEDR*ATRKADTRQAS Trigger: AGACGCCTGCCTAGTGTCTGCTTTCCTTGTTGCCAACCTGTCCTCCACTGGGCCAGCCCTCCTTACAGGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| 3UTR CAA 72 bp | GGACATTCTGTCCTACCAAGGCAGAAAGAATGGCCCTaGTCCCACCCGAGGACCTGTAAGGAGGGCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GHSVLPRQKEWP*SHPRTCKEGWP Trigger: GGGCCAGCCCTCCTTACAGGTCCTCGGGTGGGACAAGGGCCATTCTTTCTGCCTTGGTAGGACAGAATGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR GCA 90 bp | CCTGTAAGGAGGGCTGGCCCAGTGGAGGACAGGTTGGCAACAAGGAAAGCAGACGCCTGCTGGATCATCTaGCTGACCACCTGCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PVRRAGPVEDRLATRKADACWII*LTTCFR Trigger: CCTGAAGCAGGTGGTCAGGCAGATGATCCAGCAGGC...GTCTGCTTTCCTTGTTGCCAACCTGTCCTCCACTGGGCCAGCCCTCCTTACAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR GCA 90 bp | TCCAGCCATTCCAGCTGCATAGTCCACCTGGAGCAAGACTGGCTCAGAGTCCCACCTGCCAGGCCCAGGTaGTGGTGCAAGTTCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSHSSCIVHLEQDWLRVPPARPR*WCKFTS Trigger: GGAAGTGAACTTGCACCAGCACCTGGGCCTGGCAGG...TGGGACTCTGAGCCAGTCTTGCTCCAGGTGGACTATGCAGCTGGAATGGCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR GCA 90 bp | AGCACTGTCAGATCCTGCCACAGGCTGGAGGGAGGCAGAAGTATTCCTATCCCCCATGCTGCTGGGCACTaGAGGCCTCTTCACTCGACG | + |
|
Preference number: 4 (lower is better) Translates to: STVRSCHRLEGGRSIPIPHAAGH*RPLHST Trigger: CGTCGAGTGAAGAGGCCTGCAGTGCCCAGCAGCATG...GGGGATAGGAATACTTCTGCCTCCCTCCAGCCTGTGGCAGGATCTGACAGTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR CCA 90 bp | CAGAAGTATTCCTATCCCCACCACAATTCCAGTAGCAGACTAGTTCAGGAGCCAGCGGCGCAGAGGGCCTaGCGCTCCTGGCTGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QKYSYPHHNSSSRLVQEPAAQRA*RSWLER Trigger: CCTCTCCAGCCAGGAGCGCCAGGCCCTCTGCGCCGC...TGGCTCCTGAACTAGTCTGCTACTGGAATTGTGGTGGGGATAGGAATACTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR CCA 90 bp | TTCCAGCTGCATAGTCCACCTGGAGCAAGACTGGCTCAGAGTCCCACCTTCTTCAGCGTTTGCCCTCCTTaGCTGGGGTGGCCTCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FQLHSPPGARLAQSPTFFSVCPP*LGWPPH Trigger: ATGGGGAGGCCACCCCAGCCAAGGAGGGCAAACGCT...GAAGAAGGTGGGACTCTGAGCCAGTCTTGCTCCAGGTGGACTATGCAGCTGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR GCA 90 bp | GATGTCTATGTCACACTCACTCTCCCTCAGCCTGGACAGGTCACTGTAAGGGGACTGGAGGACGGCGGGTaGCTGCCACCAATGCGTACT | + |
|
Preference number: 4 (lower is better) Translates to: DVYVTLTLPQPGQVTVRGLEDGG*LPPMRT Trigger: AGTACGCATTGGTGGCAGGCACCCGCCGTCCTCCAG...TCCCCTTACAGTGACCTGTCCAGGCTGAGGGAGAGTGAGTGTGACATAGACATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR CCA 90 bp | CTCTGTCATTCTGCCTGTTCAGGAGGGTTGACCAGAGTCTACAGTCGGAGATGTGGTGTCCGAGCGGTCTaGCCAGTAGGCCAGGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: LCHSACSGGLTRVYSRRCGVRAV*PVGQGL Trigger: GAGTCCCTGGCCTACTGGCCAGACCGCTCGGACACC...ACATCTCCGACTGTAGACTCTGGTCAACCCTCCTGAACAGGCAGAATGACAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR TCA 90 bp | TCTCCCTCAGCCTGGACAGGTCACTGTAAGGGGAGGTGGCTGCTTGTCCTGGAAATGAGAGAGTCCCCTTaGTCTTCCCCATGGGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: SPSAWTGHCKGRWLLVLEMRESP*SSPWAC Trigger: ACATGCCCATGGGGAAGATCAAGGGGACTCTCTCAT...TTCCAGGACAAGCAGCCACCTCCCCTTACAGTGACCTGTCCAGGCTGAGGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR TCA 90 bp | GGCTGGGGCTGCTTTGGACATTCTGTCCTACCAAGGCAGAAAGAATGGCCCTTGGCGTCTGTGTGTGCATaGGAGACCGGTCTGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: GWGCFGHSVLPRQKEWPLASVCA*ETGLPL Trigger: CAATGGCAGACCGGTCTCTCATGCACACACAGACGC...CAAGGGCCATTCTTTCTGCCTTGGTAGGACAGAATGTCCAAAGCAGCCCCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR GCA 90 bp | TTCCAGCTGCATAGTCCACCTGGAGCAAGACTGGCTCAGAGTCCCACCTTCTTCATCTGCCTGACCACCTaGTTCAGGTGCGGTGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FQLHSPPGARLAQSPTFFICLTT*FRCGAF Trigger: GAAGGCACCGCACCTGAAGCAGGTGGTCAGGCAGAT...GAAGAAGGTGGGACTCTGAGCCAGTCTTGCTCCAGGTGGACTATGCAGCTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR GCA 90 bp | AGGCCATGTTCTTCTCCTCAGCATAGGACCGGATGGGTGGGCATCTGCAGGTCCGGTGCCTGCCACCAATaGGTACTTGGGGTTGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: RPCSSPQHRTGWVGICRSGACHQ*VLGVDK Trigger: CTTATCAACCCCAAGTACGCATTGGTGGCAGGCACC...GGACCTGCAGATGCCCACCCATCCGGTCCTATGCTGAGGAGAAGAACATGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR GCA 90 bp | TGCATAGTCCACCTGGAGCAAGACTGGCTCAGAGTCCCACCTTCTTCCATTTTTGGGAGCTGGCCATGCTaGTGGGCACTGCAGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CIVHLEQDWLRVPPSSIFGSWPC*WALQAS Trigger: AGAGGCCTGCAGTGCCCAGCAGCATGGCCAGCTCCC...AAAAATGGAAGAAGGTGGGACTCTGAGCCAGTCTTGCTCCAGGTGGACTATGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR GCA 90 bp | CAGAAGTATTCCTATCCCCACCACAATTCCAGTAGCAGACTAGTTCAGGAGCCAAGGGGGAGCTGGCCATaGTGCTGGGCACTGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QKYSYPHHNSSSRLVQEPRGSWP*CWALQA Trigger: GGCCTGCAGTGCCCAGCAGCATGGCCAGCTCCCCCT...TGGCTCCTGAACTAGTCTGCTACTGGAATTGTGGTGGGGATAGGAATACTTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR CCA 90 bp | AGAAGATCTTGGCTTGGAGGCCTAGAAGGGCTTCATTGTGGCCTTCTGCCCCTCACCTTCTGGGCCTGCTaGATCATCTGCCTGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: RRSWLGGLEGLHCGLLPLTFWAC*IICLTT Trigger: GGTGGTCAGGCAGATGATCCAGCAGGCCCAGAAGGT...GAGGGGCAGAAGGCCACAATGAAGCCCTTCTAGGCCTCCAAGCCAAGATCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR CCA 90 bp | GATGTCTATGTCACACTCACTCTCCCTCAGCCTGGACAGGTCACTGTAAGGGGAGCCAGGCCCAGGTGCTaGTGCAAGTTCACTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DVYVTLTLPQPGQVTVRGARPRC*CKFTSS Trigger: GGAGGAAGTGAACTTGCACCAGCACCTGGGCCTGGC...TCCCCTTACAGTGACCTGTCCAGGCTGAGGGAGAGTGAGTGTGACATAGACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR CCA 90 bp | CTAGACAGCACCAGATGTCCAAGAAGAAGGCAAAGTGGCTGGGGCTGCTTTGGAGGGTGGCCTCCCCATTaGCAGCTTCTCCCTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LDSTRCPRRRQSGWGCFGGWPPH*QLLPCH Trigger: ATGGCAAGGGAGAAGCTGCCAATGGGGAGGCCACCC...TCCAAAGCAGCCCCAGCCACTTTGCCTTCTTCTTGGACATCTGGTGCTGTCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR CCA 90 bp | CCTGCCTCTCACCGGCTGCCTCTGCAGATGCCCCTGTCCCTCCCTGGTACTAGTCTGATATGTTGGCATTaGAACCCTCATTGTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PASHRLPLQMPLSLPGTSLICWH*NPHCAS Trigger: AGAGGCACAATGAGGGTTCCAATGCCAACATATCAG...ACTAGTACCAGGGAGGGACAGGGGCATCTGCAGAGGCAGCCGGTGAGAGGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR TCA 90 bp | GAGGACAGGTTGGCAACAAGGAAAGCAGACACTAGGCAGGCGTCTACTTCATGTGCTGGATCATCTGCCTaGCCACCTGCTTCAGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: EDRLATRKADTRQASTSCAGSSA*PPASGA Trigger: CGCACCTGAAGCAGGTGGTCAGGCAGATGATCCAGC...ACATGAAGTAGACGCCTGCCTAGTGTCTGCTTTCCTTGTTGCCAACCTGTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR TCA 90 bp | CTCTGTCATTCTGCCTGTTCAGGAGGGTTGACCAGAGTCTACAGTCGGAGATGTCCGTGGAGGAGTAGTTaGGGCCAATCCTGCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LCHSACSGGLTRVYSRRCPWRSS*GQSCLP Trigger: TGGCAGGCAGGATTGGCCTCAACTACTCCTCCACGG...ACATCTCCGACTGTAGACTCTGGTCAACCCTCCTGAACAGGCAGAATGACAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR GCA 90 bp | GGCTGCTTTGGACATTCTGTCCTACCAAGGCAGAAAGAATGGCCCTTGTCCCACCTGCTTCAGGTGCGGTaGCTTCTCTTCTTTGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GCFGHSVLPRQKEWPLSHLLQVR*LLFFGR Trigger: CCGCCCAAAGAAGAGAAGGCACCGCACCTGAAGCAG...GTGGGACAAGGGCCATTCTTTCTGCCTTGGTAGGACAGAATGTCCAAAGCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| 3UTR CAA 72 bp | TCAGGCAGGCTACAGTGTAGAAAGGAAAGGGGTTCTTaGCCAGCACTGTCAGATCCTGCCACAGGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGRLQCRKERGS*PALSDPATGWR Trigger: CCTCCAGCCTGTGGCAGGATCTGACAGTGCTGGCAAAGAACCCCTTTCCTTTCTACACTGTAGCCTGCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR GCA 90 bp | GGAGAACTAGACAGCACCAGATGTCCAAGAAGAAGGCAAAGTGGCTGGGGCTGCGCAGTAGTAGAAAGCTaGATGTGCCTCGGTCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: GELDSTRCPRRRQSGWGCAVVES*MCLGHP Trigger: AGGGTGACCGAGGCACATGCAGCTTTCTACTACTGC...GCAGCCCCAGCCACTTTGCCTTCTTCTTGGACATCTGGTGCTGTCTAGTTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR GCA 90 bp | GGCTGCTTTGGACATTCTGTCCTACCAAGGCAGAAAGAATGGCCCTTGTCCCACACCACCTGCTTCAGGTaGGGTGCCTTCTCTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GCFGHSVLPRQKEWPLSHTTCFR*GAFSSL Trigger: CAAAGAAGAGAAGGCACCGCACCTGAAGCAGGTGGT...GTGGGACAAGGGCCATTCTTTCTGCCTTGGTAGGACAGAATGTCCAAAGCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR GCA 90 bp | TGCATAGTCCACCTGGAGCAAGACTGGCTCAGAGTCCCACCTTCTTCCATTTTTTGGCAGCTTCTCCCTTaGCATTCTGGGGCAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CIVHLEQDWLRVPPSSIFWQLLP*HSGAVP Trigger: AGGCACTGCCCCAGAATGGCAAGGGAGAAGCTGCCA...AAAAATGGAAGAAGGTGGGACTCTGAGCCAGTCTTGCTCCAGGTGGACTATGCA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| 3UTR CAA 72 bp | CTTCTGCCCCTCTGTCATTCTGCCTGTTCAGGAGGGTaGACCAGAGTCTACAGTCGGAGATGTCTATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLPLCHSACSGG*TRVYSRRCLCH Trigger: GTGACATAGACATCTCCGACTGTAGACTCTGGTCAACCCTCCTGAACAGGCAGAATGACAGAGGGGCAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| 3UTR CAA 72 bp | AAGCACTTACCAGAAGTGTTTAATCCTCACAAAGGCTaGGGAAGCCACGGTGGGGCTAACCTTGGGGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KHLPEVFNPHKG*GSHGGANLGVD Trigger: GTCCACCCCAAGGTTAGCCCCACCGTGGCTTCCCAAGCCTTTGTGAGGATTAAACACTTCTGGTAAGTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR TCA 90 bp | GGAGAACTAGACAGCACCAGATGTCCAAGAAGAAGGCAAAGTGGCTGGGGCTGCAGTTGCTGGCCTTGGTaGTTCCTTTACCTGATATGT | + |
|
Preference number: 4 (lower is better) Translates to: GELDSTRCPRRRQSGWGCSCWPW*FLYLIC Trigger: ACATATCAGGTAAAGGAATCACCAAGGCCAGCAACT...GCAGCCCCAGCCACTTTGCCTTCTTCTTGGACATCTGGTGCTGTCTAGTTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR GCA 90 bp | CTCTGTCATTCTGCCTGTTCAGGAGGGTTGACCAGAGTCTACAGTCGGAGATGTCCATTGGTAGGTCTCTaGAATCTTGGGGAAATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LCHSACSGGLTRVYSRRCPLVGL*NLGEMG Trigger: GCCCATTTCCCCAAGATTGCAGAGACCTACCAATGG...ACATCTCCGACTGTAGACTCTGGTCAACCCTCCTGAACAGGCAGAATGACAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR CCA 90 bp | AAGTATTCCTATCCCCACCACAATTCCAGTAGCAGACTAGTTCAGGAGCCATCATCTTCTTTGGGCGGGTaGGTGAAGAGCGTGACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KYSYPHHNSSSRLVQEPSSSLGG*VKSVTR Trigger: CCGAGTCACGCTCTTCACCCACCCGCCCAAAGAAGA...TGATGGCTCCTGAACTAGTCTGCTACTGGAATTGTGGTGGGGATAGGAATACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR CCA 90 bp | TGCATAGTCCACCTGGAGCAAGACTGGCTCAGAGTCCCACCTTCTTCCATTTTTACAGCAATGACCTTCTaGGCCTGCTGGATCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CIVHLEQDWLRVPPSSIFTAMTF*ACWIIC Trigger: GCAGATGATCCAGCAGGCCCAGAAGGTCATTGCTGT...AAAAATGGAAGAAGGTGGGACTCTGAGCCAGTCTTGCTCCAGGTGGACTATGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR CCA 90 bp | GAGGACAGGTTGGCAACAAGGAAAGCAGACACTAGGCAGGCGTCTACTTCATGTGCAATCTTGGGGAAATaGGCTCCACAGTGGGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: EDRLATRKADTRQASTSCAILGK*APQWAI Trigger: TATTGCCCACTGTGGAGCCCATTTCCCCAAGATTGC...ACATGAAGTAGACGCCTGCCTAGTGTCTGCTTTCCTTGTTGCCAACCTGTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| 3UTR CAA 72 bp | GATGTCCAAGAAGAAGGCAAAGTGGCTGGGGCTGCTTaGGACATTCTGTCCTACCAAGGCAGAAAGAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: DVQEEGKVAGAA*DILSYQGRKNG Trigger: GCCATTCTTTCTGCCTTGGTAGGACAGAATGTCCAAAGCAGCCCCAGCCACTTTGCCTTCTTCTTGGACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR TCA 90 bp | CTAGACAGCACCAGATGTCCAAGAAGAAGGCAAAGTGGCTGGGGCTGCTTTGGAATATCTGCTCTACTGTaGCCAGGTCATTCAGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LDSTRCPRRRQSGWGCFGISALL*PGHSES Trigger: GCTTTCTGAATGACCTGGTCACAGTAGAGCAGATAT...TCCAAAGCAGCCCCAGCCACTTTGCCTTCTTCTTGGACATCTGGTGCTGTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR CCA 90 bp | GGAGAACTAGACAGCACCAGATGTCCAAGAAGAAGGCAAAGTGGCTGGGGCTGCGCATCCACAATGTCTTaGAATATATCCCCATCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GELDSTRCPRRRQSGWGCASTMS*NISPSV Trigger: CACTGATGGGGATATATTCCAAGACATTGTGGATGC...GCAGCCCCAGCCACTTTGCCTTCTTCTTGGACATCTGGTGCTGTCTAGTTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR CCA 90 bp | CTCTGTCATTCTGCCTGTTCAGGAGGGTTGACCAGAGTCTACAGTCGGAGATGTAAATGGGCTCCACAGTaGGCAATATCTGCTCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: LCHSACSGGLTRVYSRRCKWAPQ*AISALL Trigger: CAGTAGAGCAGATATTGCCCACTGTGGAGCCCATTT...ACATCTCCGACTGTAGACTCTGGTCAACCCTCCTGAACAGGCAGAATGACAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR CCA 90 bp | AAGTATTCCTATCCCCACCACAATTCCAGTAGCAGACTAGTTCAGGAGCCATCATCACTTCCTCCGAGATaGCATACAGCTCCCGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: KYSYPHHNSSSRLVQEPSSLPPR*HTAPGT Trigger: AGTTCCGGGAGCTGTATGCCATCTCGGAGGAAGTGA...TGATGGCTCCTGAACTAGTCTGCTACTGGAATTGTGGTGGGGATAGGAATACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR TCA 90 bp | CAGAAGTATTCCTATCCCCACCACAATTCCAGTAGCAGACTAGTTCAGGAGCCAGGTGATTCCTTTACCTaGTATGTTGGCATTGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: QKYSYPHHNSSSRLVQEPGDSFT*YVGIGT Trigger: GGTTCCAATGCCAACATATCAGGTAAAGGAATCACC...TGGCTCCTGAACTAGTCTGCTACTGGAATTGTGGTGGGGATAGGAATACTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR CCA 90 bp | AAGTATTCCTATCCCCACCACAATTCCAGTAGCAGACTAGTTCAGGAGCCATCACTTTACCTGATATGTTaGCATTGGAACCCTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: KYSYPHHNSSSRLVQEPSLYLIC*HWNPHC Trigger: ACAATGAGGGTTCCAATGCCAACATATCAGGTAAAG...TGATGGCTCCTGAACTAGTCTGCTACTGGAATTGTGGTGGGGATAGGAATACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS GCA 90 bp | CTCTCCAGACGCCGGGCAGACTCACCACCGCCACTGCCCTCCTCCTaGCCCTCTACGTTGCCACCAGCTTCTCGCTGCTGCCGGGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: LSRRRADSPPPLPSS*PSTLPPASRCCRAA Trigger: GGCGGCCCGGCAGCAGCGAGAAGCTGGTGGCAACGTAGAGGGGCAGGAGGAGGGCAGTGGCGGTGGTGAGTCTGCCCGGCGTCTGGAGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS GCA 90 bp | CTGCCCTCCTCCTGCCCCTCTACGTTGCCACCAGCTTCTCGCTGCTaGCGGGCCGCCCAGCGCATCATCTCTCCTGGAGGACGGCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LPSSCPSTLPPASRC*RAAQRIISPGGRRV Trigger: CACCCGCCGTCCTCCAGGAGAGATGATGCGCTGGGCGGCCCGGCAGCAGCGAGAAGCTGGTGGCAACGTAGAGGGGCAGGAGGAGGGCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS GCA 90 bp | CCACTGCCCTCCTCCTGCCCCTCTACGTTGCCACCAGCTTCTCGCTaGTGCCGGGCCGCCCAGCGCATCATCTCTCCTGGAGGACGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PLPSSCPSTLPPASR*CRAAQRIISPGGRR Trigger: CCGCCGTCCTCCAGGAGAGATGATGCGCTGGGCGGCCCGGCAGCAGCGAGAAGCTGGTGGCAACGTAGAGGGGCAGGAGGAGGGCAGTGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS TCA 90 bp | CCTGGCGCTCCTGGCTGGAGAGGAAGTCCCGCAGCCGCTCCTTCTTaGCCAGTTCGCGGTAGGCCTGCTCGCCTCCACCCAGCAGCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PGAPGWRGSPAAAPS*PVRGRPARLHPAAP Trigger: AGGCGCTGCTGGGTGGAGGCGAGCAGGCCTACCGCGAACTGGTCAAGAAGGAGCGGCTGCGGGACTTCCTCTCCAGCCAGGAGCGCCAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS GCA 90 bp | GGGCAGACTCACCACCGCCACTGCCCTCCTCCTGCCCCTCTACGTTaGCACCAGCTTCTCGCTGCTGCCGGGCCGCCCAGCGCATCATCT | + |
|
Preference number: 5 (lower is better) Translates to: GQTHHRHCPPPAPLR*HQLLAAAGPPSASS Trigger: AGATGATGCGCTGGGCGGCCCGGCAGCAGCGAGAAGCTGGTGGCAACGTAGAGGGGCAGGAGGAGGGCAGTGGCGGTGGTGAGTCTGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS GCA 90 bp | CAGCGCCTCCAGCGCGGCCCGCCGCCTCTCGCAGTAGTAGAAAGCTaGATGTGCCTCGGTCACCCTCTCGTTCACGTGCGCCTCGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QRLQRGPPPLAVVES*MCLGHPLVHVRLVQ Trigger: CTGGACGAGGCGCACGTGAACGAGAGGGTGACCGAGGCACATGCAGCTTTCTACTACTGCGAGAGGCGGCGGGCCGCGCTGGAGGCGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS GCA 90 bp | CTCCAGCGCGGCCCGCCGCCTCTCGCAGTAGTAGAAAGCTGCATGTaGCTCGGTCACCCTCTCGTTCACGTGCGCCTCGTCCAGGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LQRGPPPLAVVESCM*LGHPLVHVRLVQAA Trigger: AGCTGCCTGGACGAGGCGCACGTGAACGAGAGGGTGACCGAGGCACATGCAGCTTTCTACTACTGCGAGAGGCGGCGGGCCGCGCTGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS CCA 90 bp | ACCAGCTTCTCGCTGCTGCCGGGCCGCCCAGCGCATCATCTCTCCTaGAGGACGGCGGGTGCCTGCCACCAATGCGTACTTGGGGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: TSFSLLPGRPAHHLS*RTAGACHQCVLGVD Trigger: ATCAACCCCAAGTACGCATTGGTGGCAGGCACCCGCCGTCCTCCAGGAGAGATGATGCGCTGGGCGGCCCGGCAGCAGCGAGAAGCTGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS GCA 90 bp | CCGGGCCGCCCAGCGCATCATCTCTCCTGGAGGACGGCGGGTGCCTaGCACCAATGCGTACTTGGGGTTGATAAGCTTTCGAGCTACCGT | + |
|
Preference number: 5 (lower is better) Translates to: PGRPAHHLSWRTAGA*HQCVLGVDKLSSYR Trigger: ACGGTAGCTCGAAAGCTTATCAACCCCAAGTACGCATTGGTGGCAGGCACCCGCCGTCCTCCAGGAGAGATGATGCGCTGGGCGGCCCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS GCA 90 bp | CATTCAGAAAGCTCTCCAGACGCCGGGCAGACTCACCACCGCCACTaGCCTCCTCCTGCCCCTCTACGTTGCCACCAGCTTCTCGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HSESSPDAGQTHHRH*PPPAPLRCHQLLAA Trigger: AGCAGCGAGAAGCTGGTGGCAACGTAGAGGGGCAGGAGGAGGGCAGTGGCGGTGGTGAGTCTGCCCGGCGTCTGGAGAGCTTTCTGAATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR CAA 90 bp | GTTCTTCTCCTCAGCATAGGACCGGATGGGTGGGCATCTGCAGGTCCTGCCCACAAGCGTTTGCCCTCCTaGGCTGGGGTGGCCTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VLLLSIGPDGWASAGPAHKRLPS*AGVASP Trigger: TGGGGAGGCCACCCCAGCCAAGGAGGGCAAACGCTT...GTGGGCAGGACCTGCAGATGCCCACCCATCCGGTCCTATGCTGAGGAGAAGAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR CAA 90 bp | GGAGGGCTGGCCCAGTGGAGGACAGGTTGGCAACAAGGAAAGCAGACACTAGGCGCCTTGGCCTTAGCCTaGGCACGGGTGCTGGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: GGLAQWRTGWQQGKQTLGALALA*ARVLET Trigger: AGTCTCCAGCACCCGTGCCAAGGCTAAGGCCAAGGC...GCCTAGTGTCTGCTTTCCTTGTTGCCAACCTGTCCTCCACTGGGCCAGCCCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR CAA 90 bp | CAAGCTCTAGCTTTCAACAGCACCATCCAGGGAATCCCAGGGCACTCAGGCAGGGGGGTGGCCTCCCCATaGGCAGCTTCTCCCTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QALAFNSTIQGIPGHSGRGVASP*AASPLP Trigger: TGGCAAGGGAGAAGCTGCCAATGGGGAGGCCACCCC...CCTGCCTGAGTGCCCTGGGATTCCCTGGATGGTGCTGTTGAAAGCTAGAGCTTG 61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR CAA 90 bp | CCTGTAAGGAGGGCTGGCCCAGTGGAGGACAGGTTGGCAACAAGGAAAGCAGACCTGCTGCTGAAGCGTTaGCCCTCCTTGGCTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PVRRAGPVEDRLATRKADLLLKR*PSLAGV Trigger: CACCCCAGCCAAGGAGGGCAAACGCTTCAGCAGCAG...GTCTGCTTTCCTTGTTGCCAACCTGTCCTCCACTGGGCCAGCCCTCCTTACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS GCA 90 bp | ACCTTCTGGGCCTGCTGGATCATCTGCCTGACCACCTGCTTCAGGTaGGGTGCCTTCTCTTCTTTGGGCGGGTGGGTGAAGAGCGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: TFWACWIICLTTCFR*GAFSSLGGWVKSVT Trigger: AGTCACGCTCTTCACCCACCCGCCCAAAGAAGAGAAGGCACCGCACCTGAAGCAGGTGGTCAGGCAGATGATCCAGCAGGCCCAGAAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR CAA 90 bp | GGCTGCTTTGGACATTCTGTCCTACCAAGGCAGAAAGAATGGCCCTTGTCCCACGCCGGGACCTTGGCCTaGGCCTTAGCCTTGGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: GCFGHSVLPRQKEWPLSHAGTLA*ALALAR Trigger: CCGTGCCAAGGCTAAGGCCAAGGCCAAGGTCCCGGC...GTGGGACAAGGGCCATTCTTTCTGCCTTGGTAGGACAGAATGTCCAAAGCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS GCA 90 bp | ATTCTGGGGCAGTGCCTCTCGGGACCTGTGCTTCGCGTCTGTGTGTaGATGAGAGACCGGTCTGCCATTGGTAGGTCTCTGCAATCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ILGQCLSGPVLRVCV*MRDRSAIGRSLQSW Trigger: CCAAGATTGCAGAGACCTACCAATGGCAGACCGGTCTCTCATGCACACACAGACGCGAAGCACAGGTCCCGAGAGGCACTGCCCCAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS GCA 90 bp | AGATCCATGACCACAGCAATGACCTTCTGGGCCTGCTGGATCATCTaGCTGACCACCTGCTTCAGGTGCGGTGCCTTCTCTTCTTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RSMTTAMTFWACWII*LTTCFRCGAFSSLG Trigger: GCCCAAAGAAGAGAAGGCACCGCACCTGAAGCAGGTGGTCAGGCAGATGATCCAGCAGGCCCAGAAGGTCATTGCTGTGGTCATGGATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS TCA 90 bp | ATCTTGGGGAAATGGGCTCCACAGTGGGCAATATCTGCTCTACTGTaGCCAGGTCATTCAGAAAGCTCTCCAGACGCCGGGCAGACTCAC | + |
|
Preference number: 5 (lower is better) Translates to: ILGKWAPQWAISALL*PGHSESSPDAGQTH Trigger: GTGAGTCTGCCCGGCGTCTGGAGAGCTTTCTGAATGACCTGGTCACAGTAGAGCAGATATTGCCCACTGTGGAGCCCATTTCCCCAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS GCA 90 bp | GGTCTCTGCAATCTTGGGGAAATGGGCTCCACAGTGGGCAATATCTaGTCTACTGTGACCAGGTCATTCAGAAAGCTCTCCAGACGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GLCNLGEMGSTVGNI*STVTRSFRKLSRRR Trigger: CCGGCGTCTGGAGAGCTTTCTGAATGACCTGGTCACAGTAGAGCAGATATTGCCCACTGTGGAGCCCATTTCCCCAAGATTGCAGAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR CAA 90 bp | TCTCCCTCAGCCTGGACAGGTCACTGTAAGGGGAGGTGGCTGCTTGTCCTGGAAAATGCGTACTTGGGGTaGATAAGCTTTCGAGCTACC | + |
|
Preference number: 5 (lower is better) Translates to: SPSAWTGHCKGRWLLVLENAYLG*ISFRAT Trigger: GGTAGCTCGAAAGCTTATCAACCCCAAGTACGCATT...TTCCAGGACAAGCAGCCACCTCCCCTTACAGTGACCTGTCCAGGCTGAGGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| CDS-3UTR CAA 90 bp | GGCCATGTTCTTCTCCTCAGCATAGGACCGGATGGGTGGGCATCTGCAGGTCCTAGCATCCACAATGTCTaGGAATATATCCCCATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GHVLLLSIGPDGWASAGPSIHNV*EYIPIS Trigger: ACTGATGGGGATATATTCCAAGACATTGTGGATGCT...AGGACCTGCAGATGCCCACCCATCCGGTCCTATGCTGAGGAGAAGAACATGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR CAA 90 bp | GGCTGCTTTGGACATTCTGTCCTACCAAGGCAGAAAGAATGGCCCTTGTCCCACGCCACCAATGCGTACTaGGGGTTGATAAGCTTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: GCFGHSVLPRQKEWPLSHATNAY*GLISFR Trigger: TCGAAAGCTTATCAACCCCAAGTACGCATTGGTGGC...GTGGGACAAGGGCCATTCTTTCTGCCTTGGTAGGACAGAATGTCCAAAGCAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR CAA 90 bp | GAGGACAGGTTGGCAACAAGGAAAGCAGACACTAGGCAGGCGTCTACTTCATGTCCTGATATGTTGGCATaGGAACCCTCATTGTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: EDRLATRKADTRQASTSCPDMLA*EPSLCL Trigger: GAGGCACAATGAGGGTTCCAATGCCAACATATCAGG...ACATGAAGTAGACGCCTGCCTAGTGTCTGCTTTCCTTGTTGCCAACCTGTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS-3UTR CAA 90 bp | GACCATAATAGACAATATTCCAGCCATTCCAGCTGCATAGTCCACCTGGAGCAAGATGAGAGAGTCCCCTaGATCTTCCCCATGGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: DHNRQYSSHSSCIVHLEQDERVP*IFPMGM Trigger: CATGCCCATGGGGAAGATCAAGGGGACTCTCTCATC...TTGCTCCAGGTGGACTATGCAGCTGGAATGGCTGGAATATTGTCTATTATGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS GCA 72 bp | GGCCTTGGCCTTAGCCTTGGCACGGGTGCTGGAGACTaGCTCCTCGTAGGGGCTCCAGGCGGCGCAGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GLGLSLGTGAGD*LLVGAPGGAEG Trigger: GCCCTCTGCGCCGCCTGGAGCCCCTACGAGGAGGCAGTCTCCAGCACCCGTGCCAAGGCTAAGGCCAAGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| CDS CAA 72 bp | TCACCACCGCCACTGCCCTCCTCCTGCCCCTCTACGTaGCCACCAGCTTCTCGCTGCTGCCGGGCCGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SPPPLPSSCPST*PPASRCCRAAQ Trigger: CTGGGCGGCCCGGCAGCAGCGAGAAGCTGGTGGCAACGTAGAGGGGCAGGAGGAGGGCAGTGGCGGTGGTGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| CDS CAA 90 bp | CGGGCAGACTCACCACCGCCACTGCCCTCCTCCTGCCCCTCTACGTaGCCACCAGCTTCTCGCTGCTGCCGGGCCGCCCAGCGCATCATC | + |
|
Preference number: 6 (lower is better) Translates to: RADSPPPLPSSCPST*PPASRCCRAAQRII Trigger: GATGATGCGCTGGGCGGCCCGGCAGCAGCGAGAAGCTGGTGGCAACGTAGAGGGGCAGGAGGAGGGCAGTGGCGGTGGTGAGTCTGCCCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| CDS GCA 72 bp | CGCCGGGCAGACTCACCACCGCCACTGCCCTCCTCCTaGCCCTCTACGTTGCCACCAGCTTCTCGCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RRADSPPPLPSS*PSTLPPASRCC Trigger: GCAGCAGCGAGAAGCTGGTGGCAACGTAGAGGGGCAGGAGGAGGGCAGTGGCGGTGGTGAGTCTGCCCGGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| CDS CAA 72 bp | GCCAGGGACTCAGTGGGCTGGGCCGGGACCTTGGCCTaGGCCTTAGCCTTGGCACGGGTGCTGGAGACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: ARDSVGWAGTLA*ALALARVLETA Trigger: GGCAGTCTCCAGCACCCGTGCCAAGGCTAAGGCCAAGGCCAAGGTCCCGGCCCAGCCCACTGAGTCCCTGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| CDS CCA 72 bp | TCGCTGCTGCCGGGCCGCCCAGCGCATCATCTCTCCTaGAGGACGGCGGGTGCCTGCCACCAATGCGTACTT | + |
|
Preference number: 6 (lower is better) Translates to: SLLPGRPAHHLS*RTAGACHQCVL Trigger: AAGTACGCATTGGTGGCAGGCACCCGCCGTCCTCCAGGAGAGATGATGCGCTGGGCGGCCCGGCAGCAGCGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| CDS TCA 72 bp | CCTGGCTGGAGAGGAAGTCCCGCAGCCGCTCCTTCTTaGCCAGTTCGCGGTAGGCCTGCTCGCCTCCACCCA | + |
|
Preference number: 6 (lower is better) Translates to: PGWRGSPAAAPS*PVRGRPARLHP Trigger: TGGGTGGAGGCGAGCAGGCCTACCGCGAACTGGTCAAGAAGGAGCGGCTGCGGGACTTCCTCTCCAGCCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS GCA 72 bp | CAGCGCGGCCCGCCGCCTCTCGCAGTAGTAGAAAGCTaGATGTGCCTCGGTCACCCTCTCGTTCACGTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: QRGPPPLAVVES*MCLGHPLVHVR Trigger: GCGCACGTGAACGAGAGGGTGACCGAGGCACATGCAGCTTTCTACTACTGCGAGAGGCGGCGGGCCGCGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| CDS GCA 72 bp | TCCTGCCCCTCTACGTTGCCACCAGCTTCTCGCTGCTaGCGGGCCGCCCAGCGCATCATCTCTCCTGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SCPSTLPPASRC*RAAQRIISPGG Trigger: TCCTCCAGGAGAGATGATGCGCTGGGCGGCCCGGCAGCAGCGAGAAGCTGGTGGCAACGTAGAGGGGCAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS GCA 72 bp | TCCTCCTGCCCCTCTACGTTGCCACCAGCTTCTCGCTaGTGCCGGGCCGCCCAGCGCATCATCTCTCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SSCPSTLPPASR*CRAAQRIISPG Trigger: TCCAGGAGAGATGATGCGCTGGGCGGCCCGGCAGCAGCGAGAAGCTGGTGGCAACGTAGAGGGGCAGGAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS GCA 72 bp | GGCCCGCCGCCTCTCGCAGTAGTAGAAAGCTGCATGTaGCTCGGTCACCCTCTCGTTCACGTGCGCCTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: GPPPLAVVESCM*LGHPLVHVRLV Trigger: GACGAGGCGCACGTGAACGAGAGGGTGACCGAGGCACATGCAGCTTTCTACTACTGCGAGAGGCGGCGGGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| CDS GCA 72 bp | AAAGCTGCATGTGCCTCGGTCACCCTCTCGTTCACGTaGGCCTCGTCCAGGCAGCTCAGTTGGGACTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: KAACASVTLSFT*ASSRQLSWDSA Trigger: GGCCGAGTCCCAACTGAGCTGCCTGGACGAGGCGCACGTGAACGAGAGGGTGACCGAGGCACATGCAGCTTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| CDS GCA 72 bp | CCCATTGGCAGCTTCTCCCTTGCCATTCTGGGGCAGTaGCTCTCGGGACCTGTGCTTCGCGTCTGTGTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PIGSFSLAILGQ*LSGPVLRVCVC Trigger: GCACACACAGACGCGAAGCACAGGTCCCGAGAGGCACTGCCCCAGAATGGCAAGGGAGAAGCTGCCAATGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS CAA 72 bp | CCTGGAGGACGGCGGGTGCCTGCCACCAATGCGTACTaGGGGTTGATAAGCTTTCGAGCTACCGTGGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PGGRRVPATNAY*GLISFRATVEE Trigger: CTCCTCCACGGTAGCTCGAAAGCTTATCAACCCCAAGTACGCATTGGTGGCAGGCACCCGCCGTCCTCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS GCA 72 bp | CCAGCGCATCATCTCTCCTGGAGGACGGCGGGTGCCTaGCACCAATGCGTACTTGGGGTTGATAAGCTTTCG | + |
|
Preference number: 6 (lower is better) Translates to: PAHHLSWRTAGA*HQCVLGVDKLS Trigger: CGAAAGCTTATCAACCCCAAGTACGCATTGGTGGCAGGCACCCGCCGTCCTCCAGGAGAGATGATGCGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS GCA 72 bp | CAGTGCCTCTCGGGACCTGTGCTTCGCGTCTGTGTGTaGATGAGAGACCGGTCTGCCATTGGTAGGTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QCLSGPVLRVCV*MRDRSAIGRSL Trigger: CAGAGACCTACCAATGGCAGACCGGTCTCTCATGCACACACAGACGCGAAGCACAGGTCCCGAGAGGCACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS GCA 72 bp | ACCACAGCAATGACCTTCTGGGCCTGCTGGATCATCTaGCTGACCACCTGCTTCAGGTGCGGTGCCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: TTAMTFWACWII*LTTCFRCGAFS Trigger: AGAGAAGGCACCGCACCTGAAGCAGGTGGTCAGGCAGATGATCCAGCAGGCCCAGAAGGTCATTGCTGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS CCA 72 bp | AGATCCATGACCACAGCAATGACCTTCTGGGCCTGCTaGATCATCTGCCTGACCACCTGCTTCAGGTGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: RSMTTAMTFWAC*IICLTTCFRCG Trigger: ACCGCACCTGAAGCAGGTGGTCAGGCAGATGATCCAGCAGGCCCAGAAGGTCATTGCTGTGGTCATGGATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS CCA 72 bp | GGCCCAGGTGCTGGTGCAAGTTCACTTCCTCCGAGATaGCATACAGCTCCCGGAACTCTATGTCAAAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GPGAGASSLPPR*HTAPGTLCQRA Trigger: AGCCCTTTGACATAGAGTTCCGGGAGCTGTATGCCATCTCGGAGGAAGTGAACTTGCACCAGCACCTGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS GCA 72 bp | AATCTTGGGGAAATGGGCTCCACAGTGGGCAATATCTaGTCTACTGTGACCAGGTCATTCAGAAAGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: NLGEMGSTVGNI*STVTRSFRKLS Trigger: GGAGAGCTTTCTGAATGACCTGGTCACAGTAGAGCAGATATTGCCCACTGTGGAGCCCATTTCCCCAAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS CAA 72 bp | GAGCTCCAGGTAAAGCTGAAAGAGCCGGTAGCTACTTaGTCCCCATCGACCATCAGGAACTTTGATGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: ELQVKLKEPVAT*SPSTIRNFDER Trigger: TCTCTCATCAAAGTTCCTGATGGTCGATGGGGACAAAGTAGCTACCGGCTCTTTCAGCTTTACCTGGAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS CAA 90 bp | GAGATCACACAGTTGCTGGCCTTGGTGATTCCTTTACCTGATATGTaGGCATTGGAACCCTCATTGTGCCTCTTTCCCAGAGGAAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: EITQLLALVIPLPDM*ALEPSLCLFPRGNS Trigger: GGAGTTTCCTCTGGGAAAGAGGCACAATGAGGGTTCCAATGCCAACATATCAGGTAAAGGAATCACCAAGGCCAGCAACTGTGTGATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS CAA 72 bp | CTGGCCTTGGTGATTCCTTTACCTGATATGTTGGCATaGGAACCCTCATTGTGCCTCTTTCCCAGAGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: LALVIPLPDMLA*EPSLCLFPRGN Trigger: GTTTCCTCTGGGAAAGAGGCACAATGAGGGTTCCAATGCCAACATATCAGGTAAAGGAATCACCAAGGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS CAA 72 bp | CAGTTGCTGGCCTTGGTGATTCCTTTACCTGATATGTaGGCATTGGAACCCTCATTGTGCCTCTTTCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: QLLALVIPLPDM*ALEPSLCLFPR Trigger: TCTGGGAAAGAGGCACAATGAGGGTTCCAATGCCAACATATCAGGTAAAGGAATCACCAAGGCCAGCAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS TCA 72 bp | TCTCCAAAAAGTATTTCACTCCACCCTCATCCAGGATaGTGTATACAGGAACCCGGCGTTTACAGGCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SPKSISLHPHPG*CIQEPGVYRQH Trigger: ATGCTGCCTGTAAACGCCGGGTTCCTGTATACATCATCCTGGATGAGGGTGGAGTGAAATACTTTTTGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
||
| CDS TCA 72 bp | GATCACACAGTTGCTGGCCTTGGTGATTCCTTTACCTaGTATGTTGGCATTGGAACCCTCATTGTGCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: DHTVAGLGDSFT*YVGIGTLIVPL Trigger: AAGAGGCACAATGAGGGTTCCAATGCCAACATATCAGGTAAAGGAATCACCAAGGCCAGCAACTGTGTGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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| CDS CAA 72 bp | AGGAACCCGGCGTTTACAGGCAGCATCCACAATGTCTaGGAATATATCCCCATCAGTGAAAAGATCCATGAC | + |
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Preference number: 6 (lower is better) Translates to: RNPAFTGSIHNV*EYIPISEKIHD Trigger: GTCATGGATCTTTTCACTGATGGGGATATATTCCAAGACATTGTGGATGCTGCCTGTAAACGCCGGGTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023044.7 |
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